View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19398_high_3 (Length: 256)
Name: NF19398_high_3
Description: NF19398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19398_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 6389828 - 6390061
Alignment:
| Q |
8 |
tgaaaagaataaagcacacaaaa--ttctgacttttgattagagaaattccaagtaatgaggtattaaggttagtataaaatacaaatgttgaataagaa |
105 |
Q |
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| T |
6389828 |
tgaaaagaataaagcacacaaaaaattctgacttttgattagagaaattccaagtaatgaggtattaaagttagtataaaatacaaatgttgaataagaa |
6389927 |
T |
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| Q |
106 |
ttctctgagatctttcacttgttattttagcatgtgaaagttggcaattatctggtcccgtatgaatatctcaccagaatctttccaaaagataatggat |
205 |
Q |
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| T |
6389928 |
ttctctgagatctttcacttgttattttagcatgtgaaagttggcaattatctggtcccgtatgaatatctcaccagaatctttccaaaagataatggat |
6390027 |
T |
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| Q |
206 |
tggagagctaaacccacttgcttggggtacaata |
239 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
6390028 |
tggagagctaaacccacttgcttggggtacaata |
6390061 |
T |
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