View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19400_low_3 (Length: 525)

Name: NF19400_low_3
Description: NF19400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19400_low_3
NF19400_low_3
[»] chr3 (35 HSPs)
chr3 (261-507)||(36233344-36233590)
chr3 (1-227)||(11652312-11652541)
chr3 (88-244)||(17603170-17603326)
chr3 (87-250)||(17603855-17604018)
chr3 (192-250)||(48648199-48648257)
chr3 (191-248)||(46150727-46150784)
chr3 (194-243)||(21727530-21727579)
chr3 (191-243)||(37520559-37520611)
chr3 (192-248)||(41458031-41458087)
chr3 (197-247)||(264465-264515)
chr3 (192-250)||(27082772-27082830)
chr3 (88-242)||(46149633-46149787)
chr3 (192-245)||(13349416-13349469)
chr3 (197-242)||(31115603-31115648)
chr3 (191-244)||(31974653-31974706)
chr3 (197-241)||(265102-265146)
chr3 (52-116)||(34277129-34277193)
chr3 (195-247)||(51469281-51469333)
chr3 (198-250)||(54458670-54458722)
chr3 (191-250)||(13477053-13477112)
chr3 (197-248)||(14871151-14871202)
chr3 (192-243)||(48649172-48649223)
chr3 (192-243)||(48765069-48765120)
chr3 (88-178)||(45080371-45080461)
chr3 (191-249)||(45081401-45081459)
chr3 (197-250)||(37988222-37988275)
chr3 (192-241)||(51827493-51827542)
chr3 (191-240)||(52281772-52281821)
chr3 (199-248)||(55373712-55373761)
chr3 (192-240)||(981673-981721)
chr3 (191-247)||(8949934-8949990)
chr3 (198-250)||(20212976-20213028)
chr3 (192-248)||(20213530-20213586)
chr3 (199-247)||(40872814-40872862)
chr3 (191-227)||(44699818-44699854)
[»] chr4 (46 HSPs)
chr4 (1-244)||(55000689-55000932)
chr4 (1-178)||(45920371-45920547)
chr4 (88-240)||(55976172-55976324)
chr4 (4-114)||(2771344-2771454)
chr4 (194-250)||(24551924-24551980)
chr4 (192-248)||(47688478-47688534)
chr4 (192-250)||(8248519-8248577)
chr4 (192-250)||(8266184-8266242)
chr4 (204-250)||(12368666-12368712)
chr4 (192-250)||(26147031-26147089)
chr4 (198-252)||(52871292-52871346)
chr4 (194-248)||(53772805-53772859)
chr4 (199-248)||(2444370-2444419)
chr4 (197-250)||(53773590-53773643)
chr4 (88-244)||(55976850-55977006)
chr4 (191-247)||(1866342-1866398)
chr4 (191-250)||(31329715-31329774)
chr4 (192-250)||(20774179-20774237)
chr4 (26-124)||(24551817-24551915)
chr4 (198-248)||(42882686-42882736)
chr4 (197-250)||(2446165-2446218)
chr4 (191-248)||(9365167-9365224)
chr4 (192-249)||(24158819-24158876)
chr4 (87-260)||(37273136-37273309)
chr4 (191-248)||(47785797-47785854)
chr4 (192-241)||(55001439-55001488)
chr4 (192-248)||(8247694-8247750)
chr4 (66-118)||(20774052-20774104)
chr4 (192-248)||(30573708-30573764)
chr4 (191-247)||(46168137-46168193)
chr4 (198-250)||(47687905-47687957)
chr4 (191-250)||(142522-142581)
chr4 (197-244)||(599305-599352)
chr4 (199-242)||(50184432-50184475)
chr4 (192-243)||(53732438-53732489)
chr4 (192-242)||(8265365-8265415)
chr4 (192-242)||(16903642-16903692)
chr4 (198-243)||(3654520-3654565)
chr4 (194-243)||(5590097-5590145)
chr4 (197-250)||(7841540-7841593)
chr4 (194-243)||(19550289-19550338)
chr4 (192-225)||(43146692-43146725)
chr4 (194-243)||(48128225-48128273)
chr4 (202-250)||(16903677-16903725)
chr4 (199-243)||(19080388-19080432)
chr4 (192-248)||(24374787-24374843)
[»] chr8 (29 HSPs)
chr8 (341-507)||(22631625-22631791)
chr8 (306-507)||(28323487-28323680)
chr8 (191-250)||(8996971-8997030)
chr8 (191-250)||(38576299-38576358)
chr8 (192-250)||(14825639-14825697)
chr8 (194-248)||(22320372-22320426)
chr8 (88-241)||(28929850-28930003)
chr8 (197-250)||(41974636-41974689)
chr8 (191-250)||(27441462-27441521)
chr8 (196-250)||(11686222-11686276)
chr8 (192-249)||(3043963-3044020)
chr8 (197-250)||(3165125-3165178)
chr8 (192-241)||(26654376-26654425)
chr8 (194-243)||(32414524-32414573)
chr8 (192-248)||(8373691-8373747)
chr8 (192-248)||(31602014-31602070)
chr8 (192-248)||(31641509-31641565)
chr8 (198-236)||(14754053-14754091)
chr8 (198-248)||(32979828-32979878)
chr8 (194-248)||(37732824-37732878)
chr8 (194-243)||(8372916-8372965)
chr8 (192-253)||(11686962-11687023)
chr8 (389-422)||(22631587-22631620)
chr8 (198-251)||(26652288-26652341)
chr8 (191-251)||(3043237-3043297)
chr8 (198-250)||(9197091-9197143)
chr8 (192-248)||(9197818-9197874)
chr8 (191-247)||(37025005-37025060)
chr8 (194-243)||(39860113-39860164)
[»] chr5 (34 HSPs)
chr5 (1-225)||(9407270-9407493)
chr5 (8-178)||(19129370-19129539)
chr5 (88-242)||(1283394-1283548)
chr5 (192-250)||(19128765-19128823)
chr5 (139-250)||(1281831-1281942)
chr5 (195-250)||(7632090-7632145)
chr5 (198-245)||(38057599-38057646)
chr5 (192-250)||(235587-235645)
chr5 (192-250)||(237819-237877)
chr5 (192-250)||(19359699-19359757)
chr5 (191-244)||(1554080-1554133)
chr5 (192-248)||(234698-234754)
chr5 (191-243)||(6476788-6476840)
chr5 (198-242)||(25858213-25858257)
chr5 (194-241)||(22798905-22798952)
chr5 (197-248)||(29046026-29046077)
chr5 (192-250)||(236927-236985)
chr5 (192-250)||(17071219-17071277)
chr5 (192-250)||(19360474-19360532)
chr5 (192-250)||(28705877-28705935)
chr5 (87-226)||(1281948-1282087)
chr5 (191-243)||(27364484-27364536)
chr5 (191-242)||(10554550-10554601)
chr5 (191-250)||(28705160-28705219)
chr5 (197-248)||(29087922-29087973)
chr5 (192-247)||(34600259-34600314)
chr5 (199-250)||(38056789-38056840)
chr5 (198-248)||(17071798-17071848)
chr5 (202-243)||(1283533-1283574)
chr5 (191-248)||(4084877-4084934)
chr5 (202-243)||(10554524-10554565)
chr5 (194-243)||(14478923-14478972)
chr5 (193-250)||(19366565-19366622)
chr5 (199-248)||(43510229-43510278)
[»] chr1 (44 HSPs)
chr1 (1-250)||(24991965-24992214)
chr1 (37-243)||(47967864-47968070)
chr1 (198-253)||(10120775-10120830)
chr1 (197-250)||(49680806-49680859)
chr1 (192-248)||(10121551-10121607)
chr1 (192-248)||(25469085-25469141)
chr1 (139-244)||(24992690-24992795)
chr1 (192-253)||(32038469-32038530)
chr1 (192-248)||(13262830-13262886)
chr1 (197-244)||(4433851-4433898)
chr1 (197-244)||(7558450-7558497)
chr1 (192-243)||(34309229-34309280)
chr1 (195-250)||(43252479-43252533)
chr1 (191-249)||(169625-169683)
chr1 (192-250)||(28182071-28182129)
chr1 (64-118)||(30663846-30663900)
chr1 (192-250)||(30663975-30664033)
chr1 (197-250)||(11704812-11704865)
chr1 (192-253)||(30663350-30663411)
chr1 (191-248)||(30932793-30932850)
chr1 (199-244)||(37577651-37577696)
chr1 (191-251)||(4135542-4135602)
chr1 (192-248)||(13263515-13263571)
chr1 (198-250)||(17172667-17172719)
chr1 (198-250)||(19172580-19172632)
chr1 (198-250)||(36390372-36390424)
chr1 (197-244)||(4439210-4439257)
chr1 (191-250)||(8987785-8987844)
chr1 (199-250)||(13142673-13142724)
chr1 (192-250)||(4134023-4134081)
chr1 (192-250)||(7406240-7406298)
chr1 (197-243)||(7559203-7559249)
chr1 (192-250)||(25468505-25468563)
chr1 (197-243)||(36389777-36389823)
chr1 (192-250)||(37576919-37576977)
chr1 (199-244)||(17171932-17171977)
chr1 (202-243)||(26118675-26118716)
chr1 (199-248)||(45818018-45818067)
chr1 (192-244)||(168891-168943)
chr1 (192-248)||(8988547-8988603)
chr1 (199-243)||(27256718-27256762)
chr1 (191-227)||(30931906-30931942)
chr1 (199-243)||(34308475-34308519)
chr1 (199-243)||(46391872-46391916)
[»] chr7 (44 HSPs)
chr7 (87-250)||(14305085-14305248)
chr7 (1-178)||(23900382-23900558)
chr7 (87-250)||(47719598-47719761)
chr7 (191-250)||(25343298-25343357)
chr7 (191-248)||(25342494-25342551)
chr7 (197-250)||(37950471-37950524)
chr7 (191-251)||(1417602-1417662)
chr7 (197-253)||(25599014-25599070)
chr7 (197-248)||(30660590-30660641)
chr7 (191-250)||(46428182-46428241)
chr7 (192-250)||(3772525-3772583)
chr7 (192-250)||(27948441-27948499)
chr7 (192-250)||(45099892-45099950)
chr7 (194-243)||(13785594-13785643)
chr7 (191-244)||(38225973-38226026)
chr7 (191-243)||(7668484-7668536)
chr7 (192-248)||(26636100-26636156)
chr7 (197-244)||(14686132-14686179)
chr7 (191-250)||(16664123-16664182)
chr7 (191-250)||(17638483-17638542)
chr7 (139-250)||(23901040-23901151)
chr7 (195-242)||(24453728-24453775)
chr7 (192-243)||(26636859-26636910)
chr7 (192-243)||(30661454-30661505)
chr7 (199-250)||(37395505-37395556)
chr7 (192-243)||(37949607-37949658)
chr7 (88-226)||(47718924-47719062)
chr7 (191-244)||(24389614-24389667)
chr7 (196-241)||(43065119-43065164)
chr7 (197-250)||(45161964-45162017)
chr7 (199-247)||(24719333-24719381)
chr7 (192-248)||(40273557-40273613)
chr7 (192-243)||(19067639-19067690)
chr7 (198-244)||(3029203-3029249)
chr7 (192-250)||(3219545-3219603)
chr7 (198-244)||(31278159-31278205)
chr7 (192-226)||(31954292-31954326)
chr7 (311-391)||(7171571-7171652)
chr7 (191-248)||(25343237-25343294)
chr7 (195-243)||(3688386-3688434)
chr7 (199-243)||(3903345-3903389)
chr7 (191-243)||(18977767-18977819)
chr7 (199-243)||(19068401-19068445)
chr7 (192-244)||(42421049-42421101)
[»] chr2 (30 HSPs)
chr2 (198-250)||(12725619-12725671)
chr2 (191-250)||(1297120-1297179)
chr2 (191-250)||(9275582-9275641)
chr2 (85-244)||(29513038-29513197)
chr2 (191-244)||(22301867-22301920)
chr2 (191-243)||(9540334-9540386)
chr2 (192-248)||(11750255-11750311)
chr2 (198-250)||(23857028-23857080)
chr2 (191-250)||(9276327-9276386)
chr2 (192-243)||(29719449-29719500)
chr2 (192-250)||(18174668-18174726)
chr2 (191-248)||(1296377-1296434)
chr2 (191-244)||(15774204-15774257)
chr2 (194-243)||(15902882-15902931)
chr2 (197-250)||(29559423-29559476)
chr2 (198-250)||(11751073-11751125)
chr2 (192-248)||(22560566-22560622)
chr2 (192-248)||(42182613-42182669)
chr2 (192-243)||(8542546-8542597)
chr2 (191-242)||(26752720-26752771)
chr2 (199-250)||(27177908-27177959)
chr2 (64-118)||(11750386-11750440)
chr2 (198-248)||(18174097-18174147)
chr2 (192-250)||(26589015-26589073)
chr2 (198-244)||(27178649-27178695)
chr2 (194-227)||(16692974-16693007)
chr2 (197-250)||(29512367-29512420)
chr2 (199-248)||(36237629-36237678)
chr2 (192-248)||(23856633-23856689)
chr2 (191-243)||(34812853-34812905)
[»] scaffold0504 (1 HSPs)
scaffold0504 (199-250)||(5385-5436)
[»] chr6 (18 HSPs)
chr6 (192-250)||(10171271-10171329)
chr6 (192-250)||(26528818-26528876)
chr6 (197-250)||(19310996-19311049)
chr6 (193-250)||(33435335-33435392)
chr6 (192-248)||(8488466-8488522)
chr6 (192-248)||(10171964-10172020)
chr6 (192-248)||(26529511-26529567)
chr6 (192-250)||(21133225-21133283)
chr6 (194-243)||(33436274-33436323)
chr6 (195-243)||(19311828-19311876)
chr6 (197-248)||(19322979-19323031)
chr6 (191-243)||(19323764-19323816)
chr6 (64-118)||(8488597-8488651)
chr6 (192-250)||(12344889-12344947)
chr6 (197-250)||(25060811-25060864)
chr6 (192-248)||(3623172-3623228)
chr6 (198-250)||(3623751-3623803)
chr6 (198-250)||(18227727-18227778)
[»] scaffold0176 (1 HSPs)
scaffold0176 (198-250)||(26587-26639)
[»] scaffold0085 (1 HSPs)
scaffold0085 (192-243)||(22069-22120)
[»] scaffold0096 (1 HSPs)
scaffold0096 (194-250)||(39891-39947)
[»] scaffold0093 (1 HSPs)
scaffold0093 (192-248)||(23727-23783)
[»] scaffold0086 (1 HSPs)
scaffold0086 (192-250)||(8290-8348)
[»] scaffold2007 (1 HSPs)
scaffold2007 (197-250)||(746-799)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-110; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 261 - 507
Target Start/End: Original strand, 36233344 - 36233590
Alignment:
Q  261 gtctaactattcattgagatatattatatttcaatcaaatttttcttcttcataagattaggtccagaagcttcaagaagcacaatcatcaatggctgcc 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36233344 gtctaactattcattgagatatattatatttcaatcaaatttttcttcttcataagattaggtccagaagcttcaagaagcacaatcatcaatggctgtc 36233443  T
Q  361 attgagatagatattctctatttgtacacaaacaagtgcctgcacataatcactcctcaattgattttcgaatgttggatttgattatctcatctgaaac 460  Q
    | ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36233444 actgagatatatattctctatttgtacacaaacaagtggctgcacataatcactcctcaattgatttccgaatgttggatttgattatctcatctgaaac 36233543  T
Q  461 caattttacgggatatggctttaccttcactgatgggtggaagcatt 507  Q
    |||||||  ||||| |||||||||||||| || ||||| ||||||||    
T  36233544 caattttgtgggatctggctttaccttcaatggtgggtagaagcatt 36233590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 11652541 - 11652312
Alignment:
Q  1 aaacaatttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatat---atcattgagaagaagataggtatagtttaggaaac 97  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||| || ||||||| ||| |   |||||||||||||||| | ||    ||||||||||    
T  11652541 aaacaattaaacaaccatgaaccaattcttttgtaagataatatgatgctggtacaggatgtatcatcattgagaagaagacaagtcccatttaggaaac 11652442  T
Q  98 aagatgatttttaggaaaggagctatgcgata-tcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggtta 196  Q
    || | ||||||||||||||||| ||||  ||| | || | | ||||||||||||||| | ||||||||| ||||||||||||        |||  | |||    
T  11652441 aaaaggatttttaggaaaggagatatgaaatacttaatgtc-cacattaagattttgatgaataattattgacctttagattaaaagaaatgaacgctta 11652343  T
Q  197 agatttggtgtcaacaaatccgttgacacct 227  Q
     |||||||||||||| |||||||||||||||    
T  11652342 ggatttggtgtcaacgaatccgttgacacct 11652312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 17603326 - 17603170
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnnt 187  Q
    ||||| |||||||| ||||||||||||||||| ||||  |||| ||  ||||  |||||||||||| | ||| ||||| ||||||||||||        |    
T  17603326 tttagaaaacaagaggatttttaggaaaggagatatgaaatattaaatgctcgtattaagattttgataaatgattattgacctttagattaaaagaaat 17603227  T
Q  188 gattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||  | |||||||||||||||||| ||||||||||||||| || |||||||||||||    
T  17603226 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 17603170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 17603855 - 17604018
Alignment:
Q  87 gtttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnn 186  Q
    |||||||||| |||| ||||||||||||||||| ||||  |||  ||  |  ||||||||||||||| | ||| ||||| ||||||||||||            
T  17603855 gtttaggaaataagaggatttttaggaaaggagatatgaaatactaaatgtccacattaagattttgataaatgattattgacctttagattaaattaaa 17603954  T
Q  187 tgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||  | |||||||||||||||||| ||||||||||||||| || |||  |||||||| |||||    
T  17603955 tgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcattggatcctatctcat 17604018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 48648257 - 48648199
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  48648257 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 48648199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 46150727 - 46150784
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||| ||||    
T  46150727 tggttgagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcctgactc 46150784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 21727530 - 21727579
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  21727530 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 21727579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 37520559 - 37520611
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  37520559 tggttgagatttggtgtcaacgaattcgttgacacctggtatcaacggatcct 37520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 41458087 - 41458031
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||| ||||| ||||    
T  41458087 ggttgagatttggtgtcaacgaatccgttgacacctggtatcaacgaatcctgactc 41458031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 264515 - 264465
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    ||||||||||||||||||||| ||||||||| || |||| |||||||||||    
T  264515 agatttggtgtcaacaaatccattgacacctggtgtcaatggatcctaact 264465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 27082830 - 27082772
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| |||||||||||||| ||| |||||||||||||| |||| ||||||| ||||||    
T  27082830 ggttaggatttggtgtcaacgaattcgttgacacctagtgtcaatggatcctgactcat 27082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 242
Target Start/End: Complemental strand, 46149787 - 46149633
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnnt 187  Q
    |||||||||||||| ||||||||||||||||| ||||  ||||  |  ||  |||||||||||||  | ||| ||||| ||||||||||||             
T  46149787 tttaggaaacaagaggatttttaggaaaggagatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 46149688  T
Q  188 gattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||  | |||||||||||||||||| ||||| ||||||||| || |||| ||||||    
T  46149687 gaacgtttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcc 46149633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 13349469 - 13349416
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaa 245  Q
    |||||||||||||||||||| |||  |||||||||| |||||||| ||||||||    
T  13349469 ggttaagatttggtgtcaacgaatttgttgacacctggtatcaaccgatcctaa 13349416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 31115603 - 31115648
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||    
T  31115603 agatttggtgtcaacgaatctgttgacacctagtgtcaacggatcc 31115648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 31974706 - 31974653
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||| ||||||||||||||| ||||||||||||| | || |||||||||||||    
T  31974706 tggttgagatttggtgtcaacgaatccgttgacacttggtgtcaacggatccta 31974653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 265102 - 265146
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatc 241  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||    
T  265102 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 34277129 - 34277193
Alignment:
Q  52 gtacatgatatatcattgagaagaagataggtatagtttaggaaacaagatgatttttaggaaag 116  Q
    |||||||| || ||||||||||||||||  || |  ||||||||||||||| |||||||||||||    
T  34277129 gtacatgacatctcattgagaagaagatgagtctcttttaggaaacaagatcatttttaggaaag 34277193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 51469281 - 51469333
Alignment:
Q  195 taagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    ||||||||||||||||| ||||||||||||| |  | ||||||||||||||||    
T  51469281 taagatttggtgtcaacgaatccgttgacacttgatgtcaacggatcctaact 51469333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 54458670 - 54458722
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||||||||||||||  || |||||||||||||| ||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcctaattcat 54458722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 13477112 - 13477053
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| |||||||||||||  ||| ||||||||||| || |||||||||||| ||||||    
T  13477112 tggttaggatttggtgtcaatgaattcgttgacacctggtgtcaacggatcctgactcat 13477053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 14871202 - 14871151
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||||| ||| ||||||||||| || |||||||||||| ||||    
T  14871202 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactc 14871151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 48649172 - 48649223
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||||||| |||| |||||||||| || |||| |||||||    
T  48649172 ggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcct 48649223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 48765069 - 48765120
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||||||| ||||| ||||||||| || |||| |||||||    
T  48765069 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcct 48765120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 45080461 - 45080371
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagatt 178  Q
    |||||||||||||| ||||||||||||||||| ||||  ||||  |  ||  |||||||||||||  | ||| ||||| ||||||||||||    
T  45080461 tttaggaaacaagaggatttttaggaaaggagatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagatt 45080371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 45081401 - 45081459
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactca 249  Q
    ||||| ||||||||||||||| |||||||||||||   || |||||||||||| |||||    
T  45081401 tggttgagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcctgactca 45081459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 37988222 - 37988275
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| ||| ||||||||||| || |||| ||||||| ||||||    
T  37988222 agatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctgactcat 37988275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 51827493 - 51827542
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatc 241  Q
    ||||||||||||||| |||| ||||||||||||||  || ||||||||||    
T  51827493 ggttaagatttggtgacaacgaatccgttgacaccaggtgtcaacggatc 51827542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 52281821 - 52281772
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggat 240  Q
    ||||| |||| |||||||||| ||||||||||||||  ||||||||||||    
T  52281821 tggttgagatctggtgtcaacgaatccgttgacaccaggtatcaacggat 52281772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 55373712 - 55373761
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||| ||||    
T  55373712 atttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactc 55373761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 981721 - 981673
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggat 240  Q
    |||| ||||||||||||||| ||| ||||||||||| || |||||||||    
T  981721 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 8949990 - 8949934
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    |||||||||||| ||||||||  || ||||||||| | || ||||||||||||||||    
T  8949990 tggttaagattttgtgtcaacggattcgttgacacatggtgtcaacggatcctaact 8949934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 20213028 - 20212976
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||| ||||||||||| || ||||||||| || ||||||    
T  20213028 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcat 20212976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 20213530 - 20213586
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| |||||||||||||| ||| ||| ||||||| || |||||||||||| ||||    
T  20213530 ggttaggatttggtgtcaacgaattcgtcgacacctggtgtcaacggatcctgactc 20213586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 40872814 - 40872862
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    ||||||||||||  ||||||||||||||| || |||||||||| |||||    
T  40872814 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcttaact 40872862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 44699818 - 44699854
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacct 227  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  44699818 tggttaatatttggtgtcaacgaatccgttgacacct 44699854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 7e-78; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 55000932 - 55000689
Alignment:
Q  1 aaacaatttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaag 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55000932 aaacaatttaaccaccacgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaag 55000833  T
Q  101 atgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggttaagat 200  Q
    ||||||||||||||||||| ||||  |||  ||| |||||||||||||||||| | ||||||||| ||||||||||||        |||  | |||||||    
T  55000832 atgatttttaggaaaggagatatgaaatactaagtgctcacattaagattttgatcaataattattgacctttagattaaaagaaatgaacgtttaagat 55000733  T
Q  201 ttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||| |||||||||||| || || |||| ||||||||    
T  55000732 ttggtgtcaacgaatccgttgacatctggtgtcaatggatccta 55000689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 45920547 - 45920371
Alignment:
Q  1 aaacaatttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaag 100  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45920547 aaacaatttaacaaccatgaatcaattcttttgaaagataacatggtgttggtacat-atatatcattgagaagaagataggtatagtttaggaaacaag 45920449  T
Q  101 atgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagatt 178  Q
    | ||||||||||||||||| ||||  |||  ||| || ||||||||||||||| | ||||||||| ||||||||||||    
T  45920448 aggatttttaggaaaggagatatgaaatactaagtgcccacattaagattttgatcaataattattgacctttagatt 45920371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 240
Target Start/End: Complemental strand, 55976324 - 55976172
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnnt 187  Q
    ||||| |||||||| ||||||||||||||||| ||||  |||| ||  || ||||||||||||||| | ||| ||||| ||||||||||||        |    
T  55976324 tttagaaaacaagaggatttttaggaaaggagatatgaaatattaaatgcccacattaagattttgataaatgattattgacctttagattaaaagaaat 55976225  T
Q  188 gattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggat 240  Q
    ||  | |||||||||||||||||| ||||||||||||||| || |||||||||    
T  55976224 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggat 55976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 2771454 - 2771344
Alignment:
Q  4 caatttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaagatg 103  Q
    ||||||||| | |||||| ||||||||||| ||||||| ||||||||||| || ||| ||||||||||||||||||  || | |||||||||||||||      
T  2771454 caatttaacaatcatgaaacaattcttttgtaagataatatggtgttggtgcaagatgtatcattgagaagaagatgagtctcgtttaggaaacaagaga 2771355  T
Q  104 atttttaggaa 114  Q
    | |||||||||    
T  2771354 aattttaggaa 2771344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 24551924 - 24551980
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||||||||||||||||| || |||| |||||||| |||||    
T  24551924 ttaagatttggtgtcaacaaatccgttgacacctggtgtcaatggatcctatctcat 24551980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 47688478 - 47688534
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  47688478 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactc 47688534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 8248519 - 8248577
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||| |||||||||||| || || |||||||||||| ||||||    
T  8248519 ggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcat 8248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 8266184 - 8266242
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||| |||||||||||| || || |||||||||||| ||||||    
T  8266184 ggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcat 8266242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 12368666 - 12368712
Alignment:
Q  204 gtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  12368666 gtgtcaacaaatccgttgacacctagtgtcaacggatcctgactcat 12368712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 26147031 - 26147089
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||| ||||||||||| || |||||||||||||||||||    
T  26147031 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcat 26147089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 52871346 - 52871292
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcattt 252  Q
    |||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  52871346 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcttaactcattt 52871292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 53772859 - 53772805
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  53772859 ttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactc 53772805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 2444419 - 2444370
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactc 2444370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 53773590 - 53773643
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| |||||||||||||||  | |||||||||||||||||||    
T  53773590 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctaactcat 53773643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 244
Target Start/End: Original strand, 55976850 - 55977006
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgata-tcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnn 186  Q
    ||||||||| |||| ||||||||||||||||| ||||  ||| | || | | ||||||||||||||| | ||| ||||| ||||||||||||            
T  55976850 tttaggaaataagaggatttttaggaaaggagatatgaaatactgaatgtc-cacattaagattttgataaatgattattgacctttagattaaattaaa 55976948  T
Q  187 tgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    |||  | |||||||||||||||||| ||||||||||||||| || || | ||||||||    
T  55976949 tgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcgatggatccta 55977006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 1866398 - 1866342
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    ||||| ||||||||||||||| ||| | |||||||||||| ||||||||||||||||    
T  1866398 tggttgagatttggtgtcaacgaattcattgacacctagtgtcaacggatcctaact 1866342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 31329715 - 31329774
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| |||||||||| ||| ||||||||||||||| || |||||||||||| ||||||    
T  31329715 tggttaggatttggtgttaacgaatccgttgacacctggtgtcaacggatcctgactcat 31329774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 20774179 - 20774237
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||||||||||||||| || |||| ||||||| ||||||    
T  20774179 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcat 20774237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 24551915 - 24551817
Alignment:
Q  26 ttcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaagatgatttttaggaaaggagctatg 124  Q
    |||||||| ||||||| ||| || ||||||| ||| ||||||||||||||||| | ||     |||| |||||||| ||||||||||||||||| ||||    
T  24551915 ttcttttgtaagataatatgatgctggtacaagatgtatcattgagaagaagacaagtcccaattagaaaacaagaggatttttaggaaaggagatatg 24551817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 42882686 - 42882736
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||||||||||| |||||||||||| || || |||||||||||||||||    
T  42882686 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctaactc 42882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 2446165 - 2446218
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||| ||| |||| |||||||||| || |||||||||||||||||||    
T  2446165 agatttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactcat 2446218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 9365224 - 9365167
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| ||||||||||||||||||| ||||||||||| || | |||||||||| ||||    
T  9365224 tggttgagatttggtgtcaacaaattcgttgacacctggtgttaacggatcctgactc 9365167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 24158819 - 24158876
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactca 249  Q
    |||||||||||||||||||| |||| |||||||||| || |||| ||||||| |||||    
T  24158819 ggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctgactca 24158876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 260
Target Start/End: Complemental strand, 37273309 - 37273136
Alignment:
Q  87 gtttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnn 186  Q
    ||||||||||||||| ||||||||||||||||| ||||  |||  ||  || ||| ||||||||||| | ||| ||||| ||| ||||||||            
T  37273309 gtttaggaaacaagaggatttttaggaaaggagatatgaaatactaaatgcccacgttaagattttgataaatgattattgacttttagattaaaaaaaa 37273210  T
Q  187 tgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcattttgtaaata 260  Q
    |||  | ||||||||||||||||||  |||| |||||| || || |||||| ||| |  |||||||| ||||||    
T  37273209 tgaacgtttaagatttggtgtcaacggatccattgacatctggtgtcaacgaatcatgtctcattttttaaata 37273136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 47785797 - 47785854
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| ||||||||||||||| ||||||||||||||| || ||||| |||||| ||||    
T  47785797 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacagatcctgactc 47785854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 55001439 - 55001488
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatc 241  Q
    ||||||||||| |||||||| ||||||||||||||| || ||||||||||    
T  55001439 ggttaagatttagtgtcaacgaatccgttgacacctggtgtcaacggatc 55001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 8247750 - 8247694
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||| |||||||| ||||||||||||||  || |||||||||||| ||||    
T  8247750 ggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactc 8247694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 20774052 - 20774104
Alignment:
Q  66 attgagaagaagataggtatagtttaggaaacaagatgatttttaggaaagga 118  Q
    |||||||||||||| ||| |  |||||||||||||| ||||||||||||||||    
T  20774052 attgagaagaagatgggtctcttttaggaaacaagaggatttttaggaaagga 20774104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 30573708 - 30573764
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| || |||| ||||||| ||||    
T  30573708 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactc 30573764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 46168193 - 46168137
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    |||||| ||||| |||||||||| |||||||||||||  | ||||||||||||||||    
T  46168193 tggttaggatttagtgtcaacaattccgttgacacctgatgtcaacggatcctaact 46168137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 47687957 - 47687905
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||| |||| |||||| || |||||||||||||||||||    
T  47687957 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactcat 47687905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 142522 - 142581
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||||||||  ||| ||||||||||  || ||||||||||||| |||||    
T  142522 tggttaagatttggtgtcaatgaattcgttgacacccggtgtcaacggatcctatctcat 142581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 599305 - 599352
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||| ||||||||||||||  || |||||||||||||    
T  599305 agatttggtgtcaacgaatccgttgacaccaggtgtcaacggatccta 599352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 50184475 - 50184432
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||||||||||||| |||||||||||||||  |||||||||||||    
T  50184475 atttggtgtcaacgaatccgttgacacctgatatcaacggatcc 50184432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 53732489 - 53732438
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| |||||| |||||||| ||||||||||||||| || ||||||||||||    
T  53732489 ggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcct 53732438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 8265415 - 8265365
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||||||||||| |||||||| ||||||||||||||  || |||||||||||    
T  8265415 ggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcc 8265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 16903642 - 16903692
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    |||| ||||||||||||||| ||||||||||||||| || |||||| ||||    
T  16903642 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 16903692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 3654520 - 3654565
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||| ||||||||||||||| |  ||||||||||||    
T  3654520 gatttggtgtcaacgaatccgttgacacctggcgtcaacggatcct 3654565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 5590145 - 5590097
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||| ||||||| ||||||||||||||| |||||||||||||||    
T  5590145 ttaaaatttgttgtcaacgaatccgttgacacct-gtatcaacggatcct 5590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 7841593 - 7841540
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| |||||||| ||||||  | |||||||||||| ||||||    
T  7841593 agatttggtgtcaacgaatccgttaacacctgatgtcaacggatcctgactcat 7841540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 19550338 - 19550289
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||| ||||||||||||||| || |||| |||||||    
T  19550338 ttaaaatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 19550289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 43146725 - 43146692
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacac 225  Q
    |||||||||||||||||||| |||||||||||||    
T  43146725 ggttaagatttggtgtcaacgaatccgttgacac 43146692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 48128225 - 48128273
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||| ||||||| ||||||||||||||| |||||||||||||||    
T  48128225 ttaaaatttgttgtcaacgaatccgttgacacct-gtatcaacggatcct 48128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 16903677 - 16903725
Alignment:
Q  202 tggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||| ||||||||||||||| || |||||| ||||| ||||||    
T  16903677 tggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactcat 16903725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 19080432 - 19080388
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||| ||||||||||||||| || ||||| ||||||    
T  19080432 atttggtgtcaacgaatccgttgacacctggtgtcaacagatcct 19080388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 24374843 - 24374787
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||| |||||||| || || |||||||||||| ||||    
T  24374843 ggttgagatttggtgtcaacgaattcgttgacagctggtgtcaacggatcctgactc 24374787  T

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Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 341 - 507
Target Start/End: Original strand, 22631625 - 22631791
Alignment:
Q  341 cacaatcatcaatggctgccattgagatagatattctctatttgtacacaaacaagtgcctgcacataatcactcctcaattgattttcgaatgttggat 440  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  22631625 cacaatcatcaatggctgccactgagatagatattctctatttgtacacaaacaagtggctgcacataatcactcctcaattgatttccgaatgttggat 22631724  T
Q  441 ttgattatctcatctgaaaccaattttacgggatatggctttaccttcactgatgggtggaagcatt 507  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||||||||  ||||| ||||||||    
T  22631725 ttgattatctcatctgaaaccaattttgcgggatctggttttaccttcactagtgggtagaagcatt 22631791  T

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Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 306 - 507
Target Start/End: Complemental strand, 28323680 - 28323487
Alignment:
Q  306 ttcttcataagattaggtccagaagcttcaagaagcacaatcatcaatggctgccattgagatagatattctctatttgtacacaaacaagtgcctgcac 405  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||||||| | | |||||||  |||| |||||||||||||||||||||| ||||||    
T  28323680 ttcttcataaaattaggtccagaagtttcaagaagcacaattatcaatggctactactgagata--tattttctatttgtacacaaacaagtggctgcac 28323583  T
Q  406 ataatcactcctcaattgattttcgaatgttggatttgattatctcatctgaaaccaattttacgggatatggctttaccttcactgatgggtggaagca 505  Q
     |||||||||||||||||||||  |||||||||||||||||     ||||||||||| |||| | |||| ||||||||||||||||| |||  |||||||    
T  28323582 ttaatcactcctcaattgatttatgaatgttggatttgatt-----atctgaaaccagttttgc-ggatctggctttaccttcactggtggcaggaagca 28323489  T

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Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 8996971 - 8997030
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  8996971 tggttgagatttggtgtcaacaaatcagttgacacctggtatcaacggatcctgactcat 8997030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 38576299 - 38576358
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  38576299 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcat 38576358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 14825697 - 14825639
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| |||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  14825697 ggttaggatttgatgtcaacgaatccgttgacacctagtgtcaacggatcctaactcat 14825639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 22320426 - 22320372
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||    
T  22320426 ttaagatttggtgtcaacgaatccgttgacacctggcatcaacggatcctgactc 22320372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 241
Target Start/End: Complemental strand, 28930003 - 28929850
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnnt 187  Q
    |||||||||||||| ||||||||||||||||| ||||  ||||  |  ||  |||||||||||||  | ||| ||||| ||||||||||||        |    
T  28930003 tttaggaaacaagaggatttttaggaaaggagatatgaaatattgaatgcctacattaagatttttataaatgattattgacctttagattaaaagaaat 28929904  T
Q  188 gattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatc 241  Q
    ||  | |||||||||||||||||| |||||||||||| || || |||| |||||    
T  28929903 gaaagtttaagatttggtgtcaacgaatccgttgacatctggtgtcaatggatc 28929850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 41974689 - 41974636
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  41974689 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 41974636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 27441521 - 27441462
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||| ||||||| ||| ||||||||||| || ||||||||||||| |||||    
T  27441521 tggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctatctcat 27441462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 11686276 - 11686222
Alignment:
Q  196 aagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||| ||||||||||||||| ||  ||| ||||||||||||||    
T  11686276 aagatttggtgtcaacgaatccgttgacacctggtgccaatggatcctaactcat 11686222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 3043963 - 3044020
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactca 249  Q
    |||||| ||||||||||||| ||| ||||||||||| || || |||||||||||||||    
T  3043963 ggttaacatttggtgtcaacgaattcgttgacacctggtgtcgacggatcctaactca 3044020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 3165125 - 3165178
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| |||||||||||||||  | |||||||||||| ||||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactcat 3165178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 26654376 - 26654425
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatc 241  Q
    |||||||||||||||||||| ||||| ||||||||| || ||||||||||    
T  26654376 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaacggatc 26654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 32414524 - 32414573
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||||| ||||||||||||||| || ||||| ||||||    
T  32414524 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaacagatcct 32414573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 8373691 - 8373747
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||| ||||||||||||| ||||||||||||| | || |||||||||||| ||||    
T  8373691 ggttaatatttggtgtcaacgaatccgttgacacttggtgtcaacggatcctgactc 8373747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 31602070 - 31602014
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||| ||||||||||| || ||||| |||||||||||    
T  31602070 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctaactc 31602014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 31641565 - 31641509
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||||||||||||||||| ||||| ||||||||| || |||| ||||||| ||||    
T  31641565 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgactc 31641509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 14754053 - 14754091
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaac 236  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  14754053 gatttagtgtcaacaaatccgttgacacctagtgtcaac 14754091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 32979828 - 32979878
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||||||| ||||||| ||||||||||| || |||||||||||| ||||    
T  32979828 gatttggtgttaacaaattcgttgacacctggtgtcaacggatcctgactc 32979878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 37732878 - 37732824
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| |||||||||||| ||||||||||||||  || |||||||||||| ||||    
T  37732878 ttaagttttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactc 37732824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 8372965 - 8372916
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||| ||||||||||||||  || ||||||||||||    
T  8372965 ttaatatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 8372916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 11686962 - 11687023
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatttt 253  Q
    |||| |||||| |||||||| ||| ||||||||||  || ||||||||||||||||| ||||    
T  11686962 ggttgagatttagtgtcaacgaattcgttgacaccaggtgtcaacggatcctaactcttttt 11687023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 22631587 - 22631620
Alignment:
Q  389 caaacaagtgcctgcacataatcactcctcaatt 422  Q
    |||||||||| |||||||||||||||||||||||    
T  22631587 caaacaagtggctgcacataatcactcctcaatt 22631620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 26652341 - 26652288
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatt 251  Q
    |||||||||| ||| ||| ||||||||||| || |||||||||||| |||||||    
T  26652341 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgactcatt 26652288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 3043297 - 3043237
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatt 251  Q
    |||||| |||||||||||||  |||  |||||||||  || ||||||||||||||||||||    
T  3043297 tggttaggatttggtgtcaatgaatttgttgacaccaggtgtcaacggatcctaactcatt 3043237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 9197143 - 9197091
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||| ||||||||||| || ||||||||| || ||||||    
T  9197143 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcat 9197091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 9197818 - 9197874
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| |||||||||||||| ||| ||||||||| | || |||||||||||| ||||    
T  9197818 ggttaggatttggtgtcaacgaattcgttgacacttggtgtcaacggatcctgactc 9197874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 37025060 - 37025005
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    ||||| ||||||||||||||| |||| ||||||| || || ||||||||||||||||    
T  37025060 tggttgagatttggtgtcaacgaatctgttgaca-ctggtgtcaacggatcctaact 37025005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 39860164 - 39860113
Alignment:
Q  194 ttaagatttggtgtcaacaaatcc--gttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||||| |||||  |||||||||| || ||||||||||||    
T  39860164 ttaagatttggtgtcaacgaatccttgttgacacctggtgtcaacggatcct 39860113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 9407493 - 9407270
Alignment:
Q  1 aaacaatttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaag 100  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  9407493 aaacaatttaacaaccatgaatcaattcttttgaaaaataacatggtgttggtacat-atatatcaatgagaagaagataggtatagtttaggaaacaag 9407395  T
Q  101 atgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggttaagat 200  Q
    | ||||||||||||||||| ||||  |||  ||| |  ||||||||||||||  | ||||||||| ||||||||||||        |||  | |||||||    
T  9407394 aggatttttaggaaaggagatatgaaatactaagtgtccacattaagatttttatcaataattattgacctttagattaaaagaaatgaacgcttaagat 9407295  T
Q  201 ttggtgtcaacaaatccgttgacac 225  Q
    ||||||||||| |||||||||||||    
T  9407294 ttggtgtcaacgaatccgttgacac 9407270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 19129370 - 19129539
Alignment:
Q  8 ttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaagatgattt 107  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| | |||||    
T  19129370 ttaacaaccatgaaccagttcttttgaaagataacatggtgttagtacatgatatataattgagaagacgataggtatagtttaggaaacaa-aggattt 19129468  T
Q  108 ttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagatt 178  Q
    |||||||||||| ||||  |||  ||| || ||||||||||||||| | ||||||||| ||||||||||||    
T  19129469 ttaggaaaggagatatgaaatactaagtgcccacattaagattttgatcaataattattgacctttagatt 19129539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 1283394 - 1283548
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnnt 187  Q
    ||||| |||||||| ||||||||||||||||| ||||  |||| ||  |  ||||||||||||||| | ||| ||||| ||||||||||||        |    
T  1283394 tttagaaaacaagaggatttttaggaaaggagatatgaaatattaaatgtccacattaagattttgataaatgattattgacctttagattaaaataaat 1283493  T
Q  188 gattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||  | |||||||||||||||||| ||||||||||||||| || |||||| ||||    
T  1283494 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 1283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 19128823 - 19128765
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  19128823 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 19128765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 1281942 - 1281831
Alignment:
Q  139 cacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacgg 238  Q
    ||||||||||||||| | ||| ||||| ||||||||||||        |||  | |||||||||||||||||| ||||||||||||||| || |||| ||    
T  1281942 cacattaagattttgataaatgattattgacctttagattaaattaaatgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaatgg 1281843  T
Q  239 atcctaactcat 250  Q
    |||||| |||||    
T  1281842 atcctatctcat 1281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 7632145 - 7632090
Alignment:
Q  195 taagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||| |||||    
T  7632145 taagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatctcat 7632090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 38057599 - 38057646
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaa 245  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  38057599 gatttggtgtcaaccaatccgttgacacctagtgtcaacggatcctaa 38057646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 235645 - 235587
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||||||||||||||| || |||| ||||||||||||||    
T  235645 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctaactcat 235587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 237819 - 237877
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  237819 ggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 237877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 19359757 - 19359699
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  19359757 ggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 19359699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 1554080 - 1554133
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||||||||| ||| ||||||||||| || |||||||||||||    
T  1554080 tggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 1554133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 234754 - 234698
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||||| ||||    
T  234754 ggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 234698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 6476788 - 6476840
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||| ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  6476788 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 6476840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 25858257 - 25858213
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    |||||||||||||| |||||||||||||||||| |||||||||||    
T  25858257 gatttggtgtcaacgaatccgttgacacctagtgtcaacggatcc 25858213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 22798952 - 22798905
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatc 241  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||    
T  22798952 ttaagatttggtgtcaacgaatccgttgacacctgatatcaacggatc 22798905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 29046077 - 29046026
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||| ||||    
T  29046077 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 29046026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 236927 - 236985
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| |||||||||||| || ||||||||||||||| || |||| ||||||||||||||    
T  236927 ggttgagatttggtgtctacgaatccgttgacacctggtgtcaatggatcctaactcat 236985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 17071277 - 17071219
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||| |||||||||||  | |||||||||||||||||||    
T  17071277 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactcat 17071219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 19360474 - 19360532
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| ||||||||||||| ||| ||||||||||| || |||||||||||| ||||||    
T  19360474 ggttaatatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcat 19360532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 28705877 - 28705935
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| |||||| |||||||| ||||||||||||||| || |||||||||||| ||||||    
T  28705877 ggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 28705935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 226
Target Start/End: Complemental strand, 1282087 - 1281948
Alignment:
Q  87 gtttaggaaacaagatgatttttaggaaaggagctatgcgata-tcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnn 185  Q
    |||||||||| |||| ||||||||||||||||| ||||  ||| | || | | ||||||||||||||| | ||| ||||| ||||||||||||           
T  1282087 gtttaggaaataagaggatttttaggaaaggagatatgaaatactgaatgtc-cacattaagattttgataaatgattattgacctttagattaaattaa 1281989  T
Q  186 ntgattggttaagatttggtgtcaacaaatccgttgacacc 226  Q
     | |  | |||||||||||||||||| ||||||||||||||    
T  1281988 attaacgtttaagatttggtgtcaacgaatccgttgacacc 1281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 27364484 - 27364536
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||| ||||||||||||||| ||||| ||||||||| || ||||||||||||    
T  27364484 tggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcct 27364536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 10554601 - 10554550
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||||| ||||||||||||||| ||||||||||||||| || |||||| ||||    
T  10554601 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 10554550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 28705219 - 28705160
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||| ||| ||||||||||||||| || ||||||||| || ||||||    
T  28705219 tggttgagatttggtgtaaacgaatccgttgacacctggtgtcaacggatactgactcat 28705160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 29087973 - 29087922
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||||  ||||||||||||||| || |||||||||||| ||||    
T  29087973 agatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactc 29087922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 34600314 - 34600259
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    |||| ||||||||||||||| ||| |||||||||||  | ||||||||||||||||    
T  34600314 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaact 34600259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 38056840 - 38056789
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||| ||||||||||||||| || ||||| ||||||| |||||    
T  38056840 atttggtgtcaaccaatccgttgacacctggtgtcaacagatcctatctcat 38056789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 17071798 - 17071848
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||||||||||| ||| |||| |||||| || |||||||||||||||||    
T  17071798 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactc 17071848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 1283533 - 1283574
Alignment:
Q  202 tggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||| ||||||||||||||| || ||||||||||||    
T  1283533 tggtgtcaacgaatccgttgacacctggtgtcaacggatcct 1283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 4084934 - 4084877
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| ||||||||||||||| ||| ||||||||||  || |||||||||||| ||||    
T  4084934 tggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctgactc 4084877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 10554565 - 10554524
Alignment:
Q  202 tggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||| ||||||||||||||| || ||||||||||||    
T  10554565 tggtgtcaacgaatccgttgacacctggtgtcaacggatcct 10554524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 14478972 - 14478923
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  14478972 ttaaaatttggtgtcaacgaatccgttgacacctgatgtcaacggatcct 14478923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 19366565 - 19366622
Alignment:
Q  193 gttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||  ||||||| ||| | ||||||||| || |||||||||||||||||||    
T  19366565 gttaagatttaatgtcaacgaattcattgacacctggtgtcaacggatcctaactcat 19366622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 43510278 - 43510229
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||| ||| |||| |||||||||| || |||||||||||||||||    
T  43510278 atttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactc 43510229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-34; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 24992214 - 24991965
Alignment:
Q  1 aaacaatttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaag 100  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||| || ||||||| ||||||||||||||||||||| | ||    ||||||||||||     
T  24992214 aaacaattaaacaaccatgaaccaattcttttgtaagataatatgatgctggtacaggatatatcattgagaagaagacaagtcccatttaggaaacaaa 24992115  T
Q  101 atgatttttaggaaaggagctatgcgata-tcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggttaaga 199  Q
    | |||||||| |||||||| ||||  ||| | || | | ||||||||||||||| | ||||||||| ||||||||||||        |||  | ||| ||    
T  24992114 aggatttttatgaaaggagatatgaaatacttaatgtc-cacattaagattttgatgaataattattgacctttagattaaatgaaatgaacgtttatga 24992016  T
Q  200 tttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||| ||||||||||||||| || |||| |||||||| |||||    
T  24992015 tttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctcat 24991965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 37 - 243
Target Start/End: Complemental strand, 47968070 - 47967864
Alignment:
Q  37 gataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaagatgatttttaggaaaggagctatgcgatatcaaggg 136  Q
    ||||| |||||| ||||||||||| ||| |||| |||||||| | || | ||||||||||||||| ||||||||||||||||| ||||  |||| ||  |    
T  47968070 gataatatggtgctggtacatgatgtataattgtgaagaagacaagtctcgtttaggaaacaagaagatttttaggaaaggagatatgaaatattaaatg 47967971  T
Q  137 ctcacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaac 236  Q
    | |||| |||||||||| | ||||||||| ||||||||||||        |||  | | |||||||||||||||| ||||||||||||||| || ||||     
T  47967970 cccacaataagattttgatgaataattattgacctttagattaagagaaatgaacgctcaagatttggtgtcaacgaatccgttgacacctggtgtcaat 47967871  T
Q  237 ggatcct 243  Q
    |||||||    
T  47967870 ggatcct 47967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 10120830 - 10120775
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatttt 253  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  10120830 gatttggtgtcaaccaatccgttgacacctggtgtcaacggatcctaactcatttt 10120775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 49680859 - 49680806
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  49680859 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcat 49680806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 10121551 - 10121607
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  10121551 ggttgagatttggtgtcaaccaatccgttgacacctggtgtcaacggatcctaactc 10121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 25469085 - 25469141
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||    
T  25469085 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 25469141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 24992690 - 24992795
Alignment:
Q  139 cacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacgg 238  Q
    ||||||||||||||||| ||||||||| ||||||||||||        |||  | |||||||||| ||||||| ||||||||||||||| || |||  ||    
T  24992690 cacattaagattttgctaaataattattgacctttagattaaaagaaatgaacgtttaagatttgatgtcaacgaatccgttgacacctggtgtcagtgg 24992789  T
Q  239 atccta 244  Q
    ||||||    
T  24992790 atccta 24992795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 32038530 - 32038469
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatttt 253  Q
    |||| ||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| ||||    
T  32038530 ggttgagatttggtgtcaacgaattcgttgacacctggtatcaaccgatcctaactcttttt 32038469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 13262886 - 13262830
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  13262886 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactc 13262830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 4433851 - 4433898
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||    
T  4433851 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 4433898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 7558497 - 7558450
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||||||||||||||||| | || |||||||||||||    
T  7558497 agatttggtgtcaacaaatccgttgacacttggtgtcaacggatccta 7558450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 34309229 - 34309280
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  34309229 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 34309280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 43252533 - 43252479
Alignment:
Q  195 taagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  43252533 taagatttggtgtcaacaaatccgttgacacct-gtgtcaacggattctatctcat 43252479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 169625 - 169683
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactca 249  Q
    ||||| |||||||||||||| |||| ||||||||||| || ||||||||||||| ||||    
T  169625 tggttgagatttggtgtcaataaattcgttgacacctggtgtcaacggatcctacctca 169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 28182071 - 28182129
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||  ||||||||||||||| || ||||| |||||| ||||||    
T  28182071 ggttaagatttggtgtcaaagaatccgttgacacctggtgtcaacagatcctcactcat 28182129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 30663846 - 30663900
Alignment:
Q  64 tcattgagaagaagataggtatagtttaggaaacaagatgatttttaggaaagga 118  Q
    ||||| |||||||||| ||| |  |||||||||||||||||||||||||||||||    
T  30663846 tcattaagaagaagatgggtctcttttaggaaacaagatgatttttaggaaagga 30663900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 30663975 - 30664033
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||||||||||||||  || |||||||||||| ||||||    
T  30663975 ggttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactcat 30664033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 11704812 - 11704865
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| ||||||||||||| | || |||| ||||||||||||||    
T  11704812 agatttggtgtcaacgaatccgttgacacttggtgtcaatggatcctaactcat 11704865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 30663411 - 30663350
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatttt 253  Q
    |||| ||||||||||||||| |||||||||| |||| || |||||||||||| |||| ||||    
T  30663411 ggttgagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctgactcttttt 30663350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 30932793 - 30932850
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| |||||||||| |||| ||||||||||||||| || |||||||||||| ||||    
T  30932793 tggttgagatttggtgccaacgaatccgttgacacctggtgtcaacggatcctcactc 30932850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 37577651 - 37577696
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  37577651 atttggtgtcaacgaatccgttgacacctggtatcaatggatccta 37577696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 4135542 - 4135602
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatt 251  Q
    ||||||||||||||||||||| |||  ||||||||||  |  |||||||||||||||||||    
T  4135542 tggttaagatttggtgtcaacgaatatgttgacacctgatgccaacggatcctaactcatt 4135602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 13263515 - 13263571
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||| ||||||||| || |||||||||||| ||||    
T  13263515 ggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgactc 13263571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 17172667 - 17172719
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||| |||||| ||||||||||||||| || ||||||||||||| |||||    
T  17172667 gatttggcgtcaacgaatccgttgacacctggtgtcaacggatcctatctcat 17172719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 19172580 - 19172632
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||||||||||||||| || |||| ||||||| ||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcat 19172632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 36390372 - 36390424
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||  || ||||||||||| || |||||||||||||||||||    
T  36390372 gatttggtgtcaacggattcgttgacacctggtgtcaacggatcctaactcat 36390424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 4439210 - 4439257
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||| ||||||||||||||  || |||||||||||||    
T  4439210 agatttggtgtcaacgaatccgttgacaccaggtgtcaacggatccta 4439257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 8987844 - 8987785
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||||||| |||||||||||||||  | ||||| |||||| ||||||    
T  8987844 tggttgagatttggtgtcaacgaatccgttgacacctgatgtcaaccgatcctgactcat 8987785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 13142673 - 13142724
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| |||||||| ||||||||||||||| || |||| ||||||||||||||    
T  13142673 atttagtgtcaacgaatccgttgacacctggtgtcaagggatcctaactcat 13142724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 4134081 - 4134023
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||| |||||  |||||||| |||||||  ||||||| |||||    
T  4134081 ggttaagatttggtgtcaacgaatccagtgacacctggtatcaaaagatcctatctcat 4134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 7406298 - 7406240
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||| |||| |||||| || |||||||||||| ||||||    
T  7406298 ggttgagatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctgactcat 7406240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 7559203 - 7559249
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||  |||||||||||||| || ||||||||||||    
T  7559203 agatttggtgtcaacggatccgttgacacctggtgtcaacggatcct 7559249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 25468563 - 25468505
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||  ||||||||||||||| || |||| ||||||| ||||||    
T  25468563 ggttgagatttggtgtcaatgaatccgttgacacctggtgtcaatggatcctgactcat 25468505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 36389823 - 36389777
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||| ||||||||||||||||  || ||||||||||||    
T  36389823 agatttggtgtcagcaaatccgttgacaccaggtgtcaacggatcct 36389777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 37576977 - 37576919
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| |||||||||||||| ||||| ||||||||  |||||||||||| ||| |||||    
T  37576977 ggttaggatttggtgtcaacgaatccattgacaccgggtatcaacggattctatctcat 37576919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 17171977 - 17171932
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||| ||| ||||||||||| || |||||||||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 17171932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 26118716 - 26118675
Alignment:
Q  202 tggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||||||||||||| || || ||||||||||||    
T  26118716 tggtgtcaacaaatccgttgacatctggtgtcaacggatcct 26118675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 45818067 - 45818018
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||  ||||||||||||||| || |||||||||| ||||||    
T  45818067 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcttaactc 45818018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 168943 - 168891
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    |||| ||||||||||||||  |||||| |||||||| || |||||||||||||    
T  168943 ggttgagatttggtgtcaatgaatccgctgacacctggtgtcaacggatccta 168891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 8988547 - 8988603
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||  ||||||||||||||| || ||| |||||| ||||||    
T  8988547 ggttgagatttggtgtcaaggaatccgttgacacctggtgtcagcggatcttaactc 8988603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 27256718 - 27256762
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||| ||| ||||||||||| || ||||||||||||    
T  27256718 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 27256762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 30931942 - 30931906
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacct 227  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  30931942 tggttaagatttggtgttaacgaatccgttgacacct 30931906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 34308519 - 34308475
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||| ||| ||||||||||| || ||||||||||||    
T  34308519 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 34308475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 46391872 - 46391916
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||| ||||||| ||||||||||||||| || ||||||||||||    
T  46391872 atttgatgtcaacgaatccgttgacacctggtgtcaacggatcct 46391916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 14305248 - 14305085
Alignment:
Q  87 gtttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnn 186  Q
    |||||||||| |||||||||||||||||||||| ||||  ||||  |  || ||||||||||||||| | ||||||||| ||||||||||||            
T  14305248 gtttaggaaagaagatgatttttaggaaaggagatatgaaatattgaatgcgcacattaagattttgatgaataattatggacctttagattcagagaaa 14305149  T
Q  187 tgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||  | |||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||    
T  14305148 tgaacgtttaagatttggtgtcaatgaatccgttgacacctagtgtcaacggatcctatctcat 14305085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 23900558 - 23900382
Alignment:
Q  1 aaacaatttaaccaccatgaaccaattcttttgaaagataacatggtgttggtacatgatatatcattgagaagaagataggtatagtttaggaaacaag 100  Q
    |||||||| ||| |||||||||||||||||||| |||||||  || || | ||||| ||| ||||||||||||||||| | ||    |||||||||||||    
T  23900558 aaacaattaaacaaccatgaaccaattcttttgtaagataatttgatgct-gtacaagatgtatcattgagaagaagacaagtcccatttaggaaacaag 23900460  T
Q  101 atgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagatt 178  Q
    | ||||||||| ||||||| ||||  ||||  |     ||||||||||||||| | ||||||||| ||||||||||||    
T  23900459 aggatttttagtaaaggagatatgaaatatttaatatccacattaagattttgatgaataattattgacctttagatt 23900382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 47719598 - 47719761
Alignment:
Q  87 gtttaggaaacaagatgatttttaggaaaggagctatgcgata-tcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnn 185  Q
    |||||||||| |||| ||||||||||||||||| ||||  ||| | || | | ||||||||||||||| | ||| ||||| ||||||||||||           
T  47719598 gtttaggaaataagaggatttttaggaaaggagatatgaaatactgaatgtc-cacattaagattttgataaatgattattgacctttagattaaattaa 47719696  T
Q  186 ntgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
     |||  | |||||||||||||||||| ||||||||||||||| || |||| |||||||| |||||    
T  47719697 atgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctcat 47719761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 25343357 - 25343298
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  25343357 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcat 25343298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 25342551 - 25342494
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  25342551 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactc 25342494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 37950471 - 37950524
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  37950471 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcat 37950524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 1417662 - 1417602
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatt 251  Q
    ||||||||||||||||||||| ||| ||||||||||| || ||||||||||||| ||||||    
T  1417662 tggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctcatt 1417602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 25599070 - 25599014
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcatttt 253  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||| |||||||||    
T  25599070 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatttt 25599014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 30660641 - 30660590
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  30660641 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactc 30660590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 46428241 - 46428182
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  46428241 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 46428182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 3772525 - 3772583
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||| ||||||||||| || |||||||||||||||||||    
T  3772525 ggttgagatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctaactcat 3772583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 27948499 - 27948441
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||| ||||||||||| || |||||||||||||||||||    
T  27948499 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcat 27948441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 45099892 - 45099950
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  45099892 ggttaaaatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 45099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 13785594 - 13785643
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  13785594 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 13785643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 38225973 - 38226026
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||||||||| ||| ||||||||||| || |||||||||||||    
T  38225973 tggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 38226026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 7668536 - 7668484
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||| ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  7668536 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 7668484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 26636156 - 26636100
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| || |||||||||||| ||||    
T  26636156 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 26636100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 14686179 - 14686132
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||||||||||||||||| | || |||||||||||||    
T  14686179 agatttggtgtcaacaaatccgttgacacttggtgtcaacggatccta 14686132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 16664123 - 16664182
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| |||||| ||||||||  |||||||||||||| || |||||||||||||||||||    
T  16664123 tggttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcat 16664182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 17638483 - 17638542
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| |||||| ||||||||  |||||||||||||| || |||||||||||||||||||    
T  17638483 tggttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcat 17638542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 23901040 - 23901151
Alignment:
Q  139 cacattaagattttgcttaataattatagacctttagattnnnnnnnntgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacgg 238  Q
    ||||||||||||||||| ||||||||| ||||||||||||        |||    ||||||||| |||||||| ||| ||||||||||| || |||| ||    
T  23901040 cacattaagattttgctaaataattattgacctttagattaaaagaaatgaacatttaagatttagtgtcaacgaattcgttgacacctggtgtcaatgg 23901139  T
Q  239 atcctaactcat 250  Q
    |||||| |||||    
T  23901140 atcctatctcat 23901151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 24453728 - 24453775
Alignment:
Q  195 taagatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||    
T  24453728 taagatttggtgtcaacaaatccgttgacacctggtgtcaacgaatcc 24453775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 26636859 - 26636910
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  26636859 ggttgagatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcct 26636910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 30661454 - 30661505
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  30661454 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 30661505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 37395505 - 37395556
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||||||||||    
T  37395505 atttggtgttaacgaatccgttgacacctggtgtcaacggatcctaactcat 37395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 37949658 - 37949607
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  37949658 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 37949607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 47719062 - 47718924
Alignment:
Q  88 tttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnnnnt 187  Q
    ||||||||||| || ||||||||||||| ||| ||||  |||| ||  || ||||||||||||||| | ||| ||||| || |||||||||        |    
T  47719062 tttaggaaacaggaggatttttaggaaatgagatatggaatattaaatgcccacattaagattttgataaatgattattgatctttagattaaaagaaat 47718963  T
Q  188 gattggttaagatttggtgtcaacaaatccgttgacacc 226  Q
    ||    |||||||||||||||||| ||||||||||||||    
T  47718962 gaacatttaagatttggtgtcaacgaatccgttgacacc 47718924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 24389614 - 24389667
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||| ||||||||||||||  ||||||||||||||| || |||||||||||||    
T  24389614 tggttgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatccta 24389667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 43065119 - 43065164
Alignment:
Q  196 aagatttggtgtcaacaaatccgttgacacctagtatcaacggatc 241  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  43065119 aagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 43065164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 45162017 - 45161964
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| |||||||| |||||| || |||| ||||||||||||||    
T  45162017 agatttggtgtcaacgaatccgttaacacctggtgtcaatggatcctaactcat 45161964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 24719381 - 24719333
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaact 247  Q
    ||||||||||||| |||||||||||| || || ||||||||||||||||    
T  24719381 atttggtgtcaacgaatccgttgacatctggtgtcaacggatcctaact 24719333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 40273613 - 40273557
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||| | ||||||||| || |||||||||||||||||    
T  40273613 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctaactc 40273557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 19067690 - 19067639
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||||| ||||||||||||| | || ||||||||||||    
T  19067690 ggttgagatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcct 19067639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 3029203 - 3029249
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    |||||||||||||| ||| ||||||||||| || |||||||||||||    
T  3029203 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 3029249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 3219545 - 3219603
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| |||||| |||||||| ||| |||| ||||||||| | |||||||||||||||||    
T  3219545 ggttgagattttgtgtcaacgaattcgttaacacctagtgttaacggatcctaactcat 3219603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 31278159 - 31278205
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    |||||||||||||| |||||||||||| || || |||||||||||||    
T  31278159 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatccta 31278205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 31954292 - 31954326
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacc 226  Q
    |||||||||||||||||||| ||||||||||||||    
T  31954292 ggttaagatttggtgtcaacgaatccgttgacacc 31954326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 7171571 - 7171652
Alignment:
Q  311 cataagattaggtccagaagcttcaagaagcacaatcatcaatggctgc----cattgagatagatattctctatttgtacacaa 391  Q
    ||||| ||||||||||||||||||   || |||||||||||||||||||    ||| |||||| ||||| ||||| |||||||||    
T  7171571 cataaaattaggtccagaagcttc---aaacacaatcatcaatggctgccactcatcgagatatatattttctatatgtacacaa 7171652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 25343237 - 25343294
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| ||||||||||||||| ||| | ||||||||| || |||||||||||| ||||    
T  25343237 tggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgactc 25343294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 3688434 - 3688386
Alignment:
Q  195 taagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||||||| |||||||||| | || || ||||||||||||    
T  3688434 taagatttggtgtcaacgaatccgttgatatctggtgtcaacggatcct 3688386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 3903345 - 3903389
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||  |||||||||||||| || ||||||||||||    
T  3903345 atttggtgtcaacggatccgttgacacctggtgtcaacggatcct 3903389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 18977767 - 18977819
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||| ||||||||||| ||| ||||||||||||||| || |||| |||||||    
T  18977767 tggttgagatttggtgttaacgaatccgttgacacctggtgtcaatggatcct 18977819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 19068401 - 19068445
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||| ||| ||||||||||| || ||||||||||||    
T  19068401 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 19068445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 42421049 - 42421101
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    |||| |||||||||||||||||||| ||||||| || || ||||| |||||||    
T  42421049 ggttgagatttggtgtcaacaaatcggttgacatctggtgtcaacagatccta 42421101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 12725619 - 12725671
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  12725619 gatttggtgtcaacaaatccgttgacacctggtgtcaacggatcctaactcat 12725671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 1297120 - 1297179
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  1297120 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcat 1297179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 9275641 - 9275582
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  9275641 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcat 9275582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 29513038 - 29513197
Alignment:
Q  85 tagtttaggaaacaagatgatttttaggaaaggagctatgcgatatcaagggctcacattaagattttgcttaataattatagacctttagattnnnnnn 184  Q
    ||||||||||| ||||| ||| ||||||||||||| ||||  |||  ||  ||  ||| |||||||||| | ||||||||| ||||||||||||          
T  29513038 tagtttaggaatcaagaggatctttaggaaaggagatatgaaatactaaatgcctacaataagattttgatgaataattattgacctttagattaggaga 29513137  T
Q  185 nntgattggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
      |||  | | |||||||||||||||| ||||||||||||||| || |||| ||||||||    
T  29513138 aatgaacgttcaagatttggtgtcaacgaatccgttgacacctggtgtcaatggatccta 29513197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22301867 - 22301920
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||||||||||||||||||| ||| ||||||||||| || |||||||||||||    
T  22301867 tggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 22301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 9540386 - 9540334
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||||||||||| ||| ||||||||||| || ||||||||||||    
T  9540386 tggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 9540334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 11750311 - 11750255
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| || |||| ||||||||||||    
T  11750311 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctaactc 11750255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 23857028 - 23857080
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||||||||||||||  || |||||||||||||||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcctaactcat 23857080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 9276327 - 9276386
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||| ||||||||||||||| ||| ||||||||||| || |||||||||||| ||||||    
T  9276327 tggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcat 9276386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 29719500 - 29719449
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  29719500 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 29719449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 18174668 - 18174726
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||| |||||||||||  | |||||||||||||||||||    
T  18174668 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactcat 18174726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 1296434 - 1296377
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||| ||||||||||||||| ||| ||||||||||| || |||||||||||| ||||    
T  1296434 tggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactc 1296377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 15774257 - 15774204
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    ||||| ||||||||||||||||||| ||||||||||  || |||||||||||||    
T  15774257 tggttgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatccta 15774204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 15902882 - 15902931
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||| |||||||| ||||||||||||||| || ||||||||||||    
T  15902882 ttaagattttgtgtcaacgaatccgttgacacctggtgtcaacggatcct 15902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 29559423 - 29559476
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| ||| ||||||||||| || ||||| |||||||||||||    
T  29559423 agatttggtgtcaacgaattcgttgacacctggtgtcaacagatcctaactcat 29559476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 11751073 - 11751125
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||| ||| ||| ||||||||||| || |||||||||||||||||||    
T  11751073 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctaactcat 11751125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 22560566 - 22560622
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| |||||||||||||||  | |||||||||||| ||||    
T  22560566 ggttgagatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactc 22560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 42182613 - 42182669
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||| ||||||||| || ||||||| |||||||||    
T  42182613 ggttgagatttggtgtcaacgaatcccttgacacctggtgtcaacgggtcctaactc 42182669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 8542546 - 8542597
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||| ||||||||||||||| |||||||||||||||||| || | |||||||    
T  8542546 ggttgagatttggtgtcaacgaatccgttgacacctagtgtccatggatcct 8542597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 26752720 - 26752771
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcc 242  Q
    ||||||||||||| ||||||| ||| ||||||||||| || |||||||||||    
T  26752720 tggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcc 26752771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 27177959 - 27177908
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||| ||| ||||||||||| || ||||||||||||| |||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctcat 27177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 11750440 - 11750386
Alignment:
Q  64 tcattgagaagaagataggtatagtttaggaaacaagatgatttttaggaaagga 118  Q
    |||||||||||||||| ||| |  |||||||||||||| | ||||||||||||||    
T  11750440 tcattgagaagaagatgggtctcttttaggaaacaagagggtttttaggaaagga 11750386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 18174147 - 18174097
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||||||||||||| ||| |||| |||||| || |||||||||||||||||    
T  18174147 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactc 18174097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 26589015 - 26589073
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| |||||| |||||| ||||||||||||| | || ||||||||||||| |||||    
T  26589015 ggttaatatttggagtcaacgaatccgttgacacttggtgtcaacggatcctatctcat 26589073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 27178649 - 27178695
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatccta 244  Q
    |||||||||||||  ||||||||||||||| || |||||||||||||    
T  27178649 gatttggtgtcaaacaatccgttgacacctggtgtcaacggatccta 27178695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 16692974 - 16693007
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacct 227  Q
    |||||||||||||||||| |||||||||||||||    
T  16692974 ttaagatttggtgtcaacgaatccgttgacacct 16693007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 29512420 - 29512367
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||||||| ||||||||||  || |||||||||| | ||||||    
T  29512420 agatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcatgactcat 29512367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 36237678 - 36237629
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    ||||||||||||  ||||||||||||||| || |||||||||||| ||||    
T  36237678 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactc 36237629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 23856689 - 23856633
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||  ||||||||||||||  || |||||||||| ||||||    
T  23856689 ggttgagatttggtgtcaatcaatccgttgacaccaggtgtcaacggatcttaactc 23856633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 34812853 - 34812905
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||| |||||||||| ||| |||||||||||| || || ||||||||||||    
T  34812853 tggttaggatttggtgttaacgaatccgttgacaactggtgtcaacggatcct 34812905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 5385 - 5436
Alignment:
Q  199 atttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcctgactcat 5436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 10171329 - 10171271
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  10171329 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 10171271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 26528876 - 26528818
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||||| ||| ||||||||||| || |||||||||||||||||||    
T  26528876 ggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactcat 26528818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 19311049 - 19310996
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||||||| |||||| || |||||||||||| ||||||    
T  19311049 agatttggtgtcaacaaatccgttaacacctggtgtcaacggatcctgactcat 19310996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 33435392 - 33435335
Alignment:
Q  193 gttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||||||| |||||||| |||||  || |||||||||||||||||||    
T  33435392 gttaagatttggtgtcaacgaatccgttaacaccaggtgtcaacggatcctaactcat 33435335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 8488522 - 8488466
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| || |||| ||||||||||||    
T  8488522 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctaactc 8488466  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 10171964 - 10172020
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  10171964 ggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactc 10172020  T

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Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 26529511 - 26529567
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| ||||||||||||||| || |||||||||||| ||||    
T  26529511 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 26529567  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 21133225 - 21133283
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||||||||| ||| |||| |||| | || |||||||||||||||||||    
T  21133225 ggttaagatttggtgtcaacgaattcgttaacacatggtgtcaacggatcctaactcat 21133283  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 33436274 - 33436323
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||||||||||||||| |||||||||||| || || ||||||||||||    
T  33436274 ttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 33436323  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 19311828 - 19311876
Alignment:
Q  195 taagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||||||||||||||| ||||||||||||||| || |||||| |||||    
T  19311828 taagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcct 19311876  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 19323031 - 19322979
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaac-ggatcctaactc 248  Q
    ||||||||||||||| ||||||||||||||| || ||||| ||||||||||||    
T  19323031 agatttggtgtcaacgaatccgttgacacctggtgtcaacgggatcctaactc 19322979  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 19323764 - 19323816
Alignment:
Q  191 tggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    ||||| ||||||||||||||| ||| ||||||||||| || ||||||||||||    
T  19323764 tggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 19323816  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 8488651 - 8488597
Alignment:
Q  64 tcattgagaagaagataggtatagtttaggaaacaagatgatttttaggaaagga 118  Q
    |||||||||||||||| ||| |  |||||||||||||| | ||||||||||||||    
T  8488651 tcattgagaagaagatgggtctcttttaggaaacaagagggtttttaggaaagga 8488597  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 12344947 - 12344889
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||| ||||| |||| |||||||||| || |||| ||||||||||||||    
T  12344947 ggttgagatttggtatcaacgaatctgttgacacctggtgtcaatggatcctaactcat 12344889  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 25060864 - 25060811
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||| |||| ||| |||| |||||||||| || |||||||||||||||||||    
T  25060864 agattttgtgttaacgaatctgttgacacctggtgtcaacggatcctaactcat 25060811  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 3623228 - 3623172
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||  ||| |||||||||||  | |||||||||||||||||    
T  3623228 ggttgagatttggtgtcaaagaattcgttgacacctgatgtcaacggatcctaactc 3623172  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 3623751 - 3623803
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||| |||| ||| || || |||||||||||||||||||    
T  3623751 gatttggtgtcaacgaattcgttaacatctggtgtcaacggatcctaactcat 3623803  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 18227778 - 18227727
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| |||||||||||| || || |||||||||||| ||||||    
T  18227778 gatttggtgtcaacgaatccgttgaca-ctggtgtcaacggatcctgactcat 18227727  T

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Target: scaffold0176 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 26639 - 26587
Alignment:
Q  198 gatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||||||||||||| ||||||||||||||| || |||||||||||| ||||||    
T  26639 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 26587  T

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Target: scaffold0085 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 22069 - 22120
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcct 243  Q
    |||||| ||||||||||||| ||||||||||||||| || ||||||||||||    
T  22069 ggttaaaatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 22120  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 39947 - 39891
Alignment:
Q  194 ttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||||| ||||||||||||||| || ||||||||| || ||||||    
T  39947 ttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggattctgactcat 39891  T

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Target: scaffold0093 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 23727 - 23783
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactc 248  Q
    |||| ||||||||||||||| |||||||||||| || || |||| ||||||||||||    
T  23727 ggttgagatttggtgtcaacgaatccgttgacaactggtgtcaatggatcctaactc 23783  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 8290 - 8348
Alignment:
Q  192 ggttaagatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    |||| ||||||||||| ||| ||| ||||||||||| || |||| ||||||||||||||    
T  8290 ggttgagatttggtgttaacgaatacgttgacacctggtgtcaatggatcctaactcat 8348  T

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Target: scaffold2007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 799 - 746
Alignment:
Q  197 agatttggtgtcaacaaatccgttgacacctagtatcaacggatcctaactcat 250  Q
    ||||||||||||||| |||||||||| |||| || |||| ||||||| ||||||    
T  799 agatttggtgtcaacgaatccgttgaaacctggtgtcaatggatcctgactcat 746  T

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