View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19401_high_10 (Length: 409)
Name: NF19401_high_10
Description: NF19401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19401_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 47285924 - 47286313
Alignment:
| Q |
1 |
attatactaaaccgtttatctgatttggtttctgatgaactgaaaattaccggtgttaaaacaggttgacatccgttttcccatccagctgtacctgatc |
100 |
Q |
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|||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
47285924 |
attacactaaatcgtttatctgatttggtttctgatgaacggaaaattaccggtgttaaaacaggttgacgtccgttttcccatccagctgtacctgatc |
47286023 |
T |
|
| Q |
101 |
cagcgccgttaattataataacatcgccgttaggtagaattaacatgtctcccattactcttgccattggcatattctcaataatccaactaggattcga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47286024 |
cagcgccgttaattataataacatcgccgttaggtagaattaacatgtctcccattactcttgccattggcatattctcaataatccaactaggattcga |
47286123 |
T |
|
| Q |
201 |
atccgttactttgagaaatccacatgttttaagtgctggcatgaagttctttccctttgcagcttcgaatgatcctcgaggtgctcccccacagatcatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47286124 |
atccgttactttgagaaatccacatgttttaagtgctggcatgaagttctttccctttgcagcttcgaatgatcctcgaggtgctcccccacagatcatg |
47286223 |
T |
|
| Q |
301 |
attgtagcttccatggagatttggttttcgtctaatggaagaagaacagatgatcctgaactaggatagttatgaggatcaccacctgga |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47286224 |
attgtagcttccatggagatttggttttcgtctaatggaagaagaacagatgatcctgaactaggatagttatgaggatcaccacctgga |
47286313 |
T |
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