View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19401_high_23 (Length: 294)

Name: NF19401_high_23
Description: NF19401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19401_high_23
NF19401_high_23
[»] chr1 (9 HSPs)
chr1 (85-240)||(33470243-33470398)
chr1 (1-84)||(41386543-41386633)
chr1 (1-62)||(1055212-1055274)
chr1 (1-62)||(25445290-25445352)
chr1 (1-62)||(39445322-39445384)
chr1 (2-84)||(41398032-41398121)
chr1 (1-62)||(44024073-44024135)
chr1 (6-47)||(24787583-24787624)
chr1 (241-278)||(33470418-33470455)
[»] chr5 (18 HSPs)
chr5 (1-84)||(1457362-1457445)
chr5 (1-85)||(27444770-27444854)
chr5 (1-84)||(43598525-43598608)
chr5 (1-84)||(43604017-43604100)
chr5 (1-84)||(43609509-43609592)
chr5 (1-86)||(43592078-43592163)
chr5 (1-84)||(27449615-27449698)
chr5 (1-66)||(30631227-30631292)
chr5 (1-62)||(28807775-28807837)
chr5 (1-84)||(15044484-15044571)
chr5 (18-84)||(31180079-31180142)
chr5 (5-62)||(37556828-37556887)
chr5 (5-62)||(37561650-37561709)
chr5 (6-62)||(2785197-2785255)
chr5 (6-62)||(31397198-31397256)
chr5 (6-62)||(31402055-31402113)
chr5 (27-85)||(38191982-38192036)
chr5 (27-85)||(38219207-38219261)
[»] chr4 (11 HSPs)
chr4 (1-84)||(51520258-51520341)
chr4 (1-84)||(56146912-56146995)
chr4 (1-62)||(9224607-9224668)
chr4 (1-62)||(9229394-9229455)
chr4 (1-62)||(45348018-45348079)
chr4 (1-62)||(45357497-45357558)
chr4 (5-62)||(3813846-3813904)
chr4 (1-62)||(18855549-18855611)
chr4 (1-84)||(5732458-5732546)
chr4 (9-86)||(29760447-29760521)
chr4 (7-84)||(24741748-24741821)
[»] chr8 (13 HSPs)
chr8 (1-84)||(7290127-7290210)
chr8 (1-84)||(6311100-6311182)
chr8 (7-85)||(36979183-36979258)
chr8 (1-62)||(39785024-39785086)
chr8 (1-84)||(25328478-25328568)
chr8 (7-84)||(30655448-30655521)
chr8 (6-84)||(4760291-4760366)
chr8 (6-66)||(10689358-10689416)
chr8 (6-84)||(18870775-18870849)
chr8 (6-84)||(18853384-18853457)
chr8 (7-47)||(33038023-33038063)
chr8 (6-62)||(35745213-35745271)
chr8 (9-84)||(19752609-19752681)
[»] chr6 (12 HSPs)
chr6 (1-84)||(22010897-22010983)
chr6 (3-62)||(6438324-6438383)
chr6 (1-62)||(11856795-11856856)
chr6 (1-62)||(14737777-14737838)
chr6 (1-62)||(14742636-14742697)
chr6 (1-84)||(28184297-28184387)
chr6 (5-62)||(28155775-28155832)
chr6 (10-84)||(5674987-5675057)
chr6 (6-62)||(6005239-6005297)
chr6 (8-84)||(31936398-31936470)
chr6 (6-62)||(33336149-33336207)
chr6 (6-84)||(30126010-30126084)
[»] chr2 (8 HSPs)
chr2 (1-84)||(44312824-44312910)
chr2 (1-62)||(32246607-32246669)
chr2 (1-85)||(39812188-39812279)
chr2 (7-84)||(11099143-11099217)
chr2 (8-84)||(14291295-14291367)
chr2 (5-62)||(19344243-19344301)
chr2 (5-62)||(19349101-19349159)
chr2 (6-84)||(9296617-9296691)
[»] chr7 (11 HSPs)
chr7 (1-62)||(24024528-24024589)
chr7 (1-84)||(12396710-12396796)
chr7 (1-62)||(12406155-12406216)
chr7 (1-84)||(4866528-4866614)
chr7 (1-84)||(31109783-31109872)
chr7 (6-84)||(2057765-2057840)
chr7 (1-62)||(19992135-19992197)
chr7 (6-86)||(20357763-20357839)
chr7 (4-84)||(1533654-1533730)
chr7 (5-62)||(21812443-21812501)
chr7 (6-84)||(21645818-21645892)
[»] chr3 (14 HSPs)
chr3 (1-84)||(22173395-22173484)
chr3 (1-84)||(18656228-18656316)
chr3 (6-84)||(7167051-7167126)
chr3 (6-84)||(2671802-2671876)
chr3 (8-84)||(40373013-40373085)
chr3 (10-84)||(8477171-8477242)
chr3 (5-62)||(2673136-2673195)
chr3 (5-62)||(2677292-2677351)
chr3 (5-62)||(8512037-8512096)
chr3 (5-62)||(8516917-8516976)
chr3 (6-62)||(10207755-10207813)
chr3 (4-84)||(28504068-28504145)
chr3 (6-64)||(8739280-8739335)
chr3 (6-64)||(9091518-9091573)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-62)||(35262-35323)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-84)||(34149-34239)
[»] scaffold0355 (2 HSPs)
scaffold0355 (5-84)||(9844-9930)
scaffold0355 (21-62)||(101-143)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-62)||(13171-13233)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-62)||(185-247)
[»] scaffold0978 (1 HSPs)
scaffold0978 (6-66)||(453-510)
[»] scaffold0197 (1 HSPs)
scaffold0197 (6-62)||(19370-19428)
[»] scaffold0028 (1 HSPs)
scaffold0028 (6-62)||(149161-149219)
[»] scaffold0188 (1 HSPs)
scaffold0188 (27-85)||(24278-24332)


Alignment Details
Target: chr1 (Bit Score: 144; Significance: 9e-76; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 33470243 - 33470398
Alignment:
Q  85 caacctaatgtgtcaaatgccatataaatgtaaattttaattcctaaattaccaccaaaaaatttcttgttaagaaagtttatttcttcagatgccaaac 184  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33470243 caacctaatgtgtcaaatgtcatataaatgtaaattttaattgctaaattaccaccaaaaaatttcttgttaagaaagtttatttcttcagatgccaaac 33470342  T
Q  185 caatgcagtctctaatatgtcttcctctaataaagcatcttcgatcctctaagata 240  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33470343 caatgcagtctctaatatgtctccctctaataaagcatcttcgatcctctaagata 33470398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41386633 - 41386543
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||       |||||||||||||||||||||    
T  41386633 ttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtgaaggtttctttggaaccggattcacaaca 41386543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1055212 - 1055274
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  1055212 ttgttcacattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 1055274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25445290 - 25445352
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25445290 ttgttctcattgattatcactatcgcttgctccacacatcattggtttatttcattggtgtga 25445352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39445384 - 39445322
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  39445384 ttgttcacattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 39445322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 41398121 - 41398032
Alignment:
Q  2 tgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||       |||||||||||||||||||||    
T  41398121 tgttctcattgattatcactatcacttgctccacacataattggtttatttcattggtgtgaaggtttctttggaaccggattcacaaca 41398032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44024073 - 44024135
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  44024073 ttgttctcattgattatcactatcagttgctccacacatcattggtttatttcattggtgtga 44024135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 24787583 - 24787624
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgttt 47  Q
    |||||| |||||||||||| ||||||||||||||| ||||||    
T  24787583 ctcatttattaccactatctcttgctccacacatctttgttt 24787624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 33470418 - 33470455
Alignment:
Q  241 taaaatgactctttatttaaatatggccatatcaatgg 278  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  33470418 taaaatgactctaaatttaaatatggccatatcaatgg 33470455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1457362 - 1457445
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457362 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 1457445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27444854 - 27444770
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacac 85  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27444854 ttgtactcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacac 27444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43598608 - 43598525
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43598608 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccggattcacaaca 43598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43604100 - 43604017
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43604100 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccggattcacaaca 43604017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43609592 - 43609509
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43609592 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccggattcacaaca 43609509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43592163 - 43592078
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacaca 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  43592163 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattgatgtgactttggaaccggattcacaacaca 43592078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27449698 - 27449615
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27449698 ttgtactcattgattaccactatctcttgctccacatatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 27449615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30631292 - 30631227
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt 66  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  30631292 ttgttctcatagattaccactatctcttgctccacacatcattgtttatttcatttgtgtgagttt 30631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28807775 - 28807837
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  28807775 ttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 28807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15044571 - 15044484
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||||||       |||||||||||||||||||||    
T  15044571 ttgttctcattgattaccactatcacttgctctacacgtcattg--tatttcattggtgtgaaggtttctttggaaccggattcacaaca 15044484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 31180142 - 31180079
Alignment:
Q  18 cactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||| |||||||||||||||||||||   |||||||||||||||||  ||||||||||||||||    
T  31180142 cactatctcttgctccacacatcattgtt--attcattggtgtgagttt-caaccggattcacaaca 31180079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 37556828 - 37556887
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    |||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  37556828 tctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtga 37556887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 37561650 - 37561709
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    |||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  37561650 tctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtga 37561709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 2785255 - 2785197
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2785255 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 31397198 - 31397256
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 62  Q
    ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  31397198 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 31397256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 31402055 - 31402113
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 62  Q
    ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  31402055 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 31402113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 38192036 - 38191982
Alignment:
Q  27 ttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacac 85  Q
    |||||||||||||| |||||||   |||||||||||||||  |||||||||||||||||    
T  38192036 ttgctccacacatctttgttta---cattggtgtgagttt-caaccggattcacaacac 38191982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 38219261 - 38219207
Alignment:
Q  27 ttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacac 85  Q
    |||||||||||||| |||||||   |||||||||||||||  |||||||||||||||||    
T  38219261 ttgctccacacatctttgttta---cattggtgtgagttt-caaccggattcacaacac 38219207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51520341 - 51520258
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520341 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 51520258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 56146912 - 56146995
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  56146912 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaatttggaaccggattcacaaca 56146995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9224607 - 9224668
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9224607 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 9224668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9229394 - 9229455
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9229394 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 9229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45348018 - 45348079
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45348018 ttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45348079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45357497 - 45357558
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357497 ttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45357558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 3813904 - 3813846
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3813904 tctcattgattaccactatcacttgctccacacatcattggtttatttcattggtgtga 3813846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18855611 - 18855549
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  18855611 ttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 18855549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5732546 - 5732458
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||       |||||||||||||||||||||    
T  5732546 ttgttctcattgattaccaccatcacttgctccacacatcattgtat-tttcattggtgtgaaggtttctttggaaccggattcacaaca 5732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 29760521 - 29760447
Alignment:
Q  9 attgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacaca 86  Q
    |||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||  ||||||||||||||||||    
T  29760521 attgattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-caaccggattcacaacaca 29760447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 24741821 - 24741748
Alignment:
Q  7 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||    
T  24741821 tcattgattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttt-caaccggattcacaaca 24741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 7290127 - 7290210
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7290127 ttgttctcattgattaccactatctcttgctccacacatcaatgtttatttcattggtgtgagtttggaaccggattcacaaca 7290210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6311182 - 6311100
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  6311182 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggattcacaaca 6311100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 36979258 - 36979183
Alignment:
Q  7 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacac 85  Q
    |||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||  |||||||||||||||||    
T  36979258 tcattgattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-caaccggattcacaacac 36979183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39785024 - 39785086
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  39785024 ttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtga 39785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25328478 - 25328568
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattg-tttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||| |||||||||||||||| |||||||||| |||||||||||| |||||       |||||||||||||||||||||    
T  25328478 ttgttctcattgattatcactatcacttgctccgcacatcattgatttatttcattgttgtgaaggtttctttggaaccggattcacaaca 25328568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 30655521 - 30655448
Alignment:
Q  7 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||    
T  30655521 tcattgattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttt-caaccggattcacaaca 30655448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 4760291 - 4760366
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||||||||||||||| || |||||||||||| |||||  |||||||| |||||||||  ||||||||||||||||    
T  4760291 ctcattgattaccactatctctagctccacacatctttgtt--tttcattgatgtgagttt-caaccggattcacaaca 4760366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 10689358 - 10689416
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt 66  Q
    ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||    
T  10689358 ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt 10689416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 18870775 - 18870849
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| |||||||| |||| ||||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||    
T  18870775 ctcatagattaccattatctcttgctccacacatctttgt---tttcattggtgtgagttt-caaccggattcacaaca 18870849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 18853384 - 18853457
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| ||||||||||||| |||||||||||||||    ||| |||| |||||||||||||  ||||||||||||||||    
T  18853384 ctcatagattaccactatctcttgctccacacatc----tttgtttcgttggtgtgagttt-caaccggattcacaaca 18853457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 33038023 - 33038063
Alignment:
Q  7 tcattgattaccactatcacttgctccacacatcattgttt 47  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  33038023 tcattgattaccactatctcttgctccacacatctttgttt 33038063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 35745271 - 35745213
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  35745271 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 35745213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 19752609 - 19752681
Alignment:
Q  9 attgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||  |  |||||||||||||| |||||| |||||||||||||| |||   |||||||||||||||    
T  19752609 attgattaccacttccttttgctccacacatctttgttt-tttcattggtgtgatttt--taccggattcacaaca 19752681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22010897 - 22010983
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgt---gagtttggaaccggattcacaaca 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| |||||||||||||||||    
T  22010897 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgaagatttttgaaccggattcacaaca 22010983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 6438383 - 6438324
Alignment:
Q  3 gttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6438383 gttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 6438324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11856856 - 11856795
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11856856 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 11856795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14737777 - 14737838
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14737777 ttgttctcattgattatcactatcacttgctccacacatcattgtttatttcattggtgtga 14737838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14742636 - 14742697
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14742636 ttgttctcattgattatcactatcacttgctccacacatcattgtttatttcattggtgtga 14742697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28184387 - 28184297
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||      ||||| ||||||||||||||||    
T  28184387 ttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 28184297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 28155775 - 28155832
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  28155775 tctcattgattatcactatcacttgctccacacatcattgtttattgcattggtgtga 28155832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 5674987 - 5675057
Alignment:
Q  10 ttgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||  |||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||    
T  5674987 ttgattaccactatcttttgctccacacatctttgt---tttcattggtgtgagttt-taaccggattcacaaca 5675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 6005297 - 6005239
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  6005297 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 6005239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 31936470 - 31936398
Alignment:
Q  8 cattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||||||||||  |  |||||||||||||| |||||  |||||||||||||| |||  ||||||||||||||||    
T  31936470 cattgattaccacttccttttgctccacacatctttgtt--tttcattggtgtgatttt--aaccggattcacaaca 31936398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 33336149 - 33336207
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  33336149 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 33336207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 30126010 - 30126084
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| ||||| ||||| | ||||||||||||||| ||||   |||||||||||||| |||  ||||||||||||||||    
T  30126010 ctcatagattatcactacctcttgctccacacatctttgt---tttcattggtgtga-ttttcaaccggattcacaaca 30126084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44312824 - 44312910
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgt---gagtttggaaccggattcacaaca 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| |||||||||||||||||    
T  44312824 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgaagatttttgaaccggattcacaaca 44312910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32246669 - 32246607
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32246669 ttgttctcatagattaccactatcacttgctccacacatcattggtttatttcattggtgtga 32246607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39812188 - 39812279
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga------gtttggaaccggattcacaacac 85  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||       ||||||||||||||||||||||    
T  39812188 ttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtgaaggtttctttggaaccggattcacaacac 39812279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 11099143 - 11099217
Alignment:
Q  7 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||  ||||||||||||||||    
T  11099143 tcattgattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-caaccggattcacaaca 11099217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 14291367 - 14291295
Alignment:
Q  8 cattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||||||||||||| ||||||||||||| | ||||   ||||||||||||||||||  ||||||||||||||||    
T  14291367 cattgattaccactatctcttgctccacacacctttgt---tttcattggtgtgagttt-taaccggattcacaaca 14291295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 19344301 - 19344243
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  19344301 tctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19344243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 19349159 - 19349101
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  19349159 tctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19349101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 9296617 - 9296691
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| ||||||||||| |  |||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||    
T  9296617 ctcatagattaccactaccttttgctccacacatctttgt---tttcattggtgtgagttt-taaccggattcacaaca 9296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24024528 - 24024589
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024528 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 24024589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12396796 - 12396710
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga---gtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    ||| |||||||||||||||||    
T  12396796 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaaggtttttgaaccggattcacaaca 12396710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12406216 - 12406155
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12406216 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 12406155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4866614 - 4866528
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga---gtttggaaccggattcacaaca 84  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    ||| |||||||||||||||||    
T  4866614 ttgtcctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaaggtttttgaaccggattcacaaca 4866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31109783 - 31109872
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  31109783 ttgttctcattgattatcactatcacttgctgcacacatcattgtttatttcattggtgtgaaggtttctttggaaccggattcacaaca 31109872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 2057840 - 2057765
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||  ||||||||||||||||    
T  2057840 ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-caaccggattcacaaca 2057765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19992197 - 19992135
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||    
T  19992197 ttgttctcattgattatcactatcacctgctccacacatctttggtttatttcattggtgtga 19992135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 20357763 - 20357839
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacaca 86  Q
    ||||| ||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||||    
T  20357763 ctcatagattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttt-caaccggattcacaacaca 20357839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 1533654 - 1533730
Alignment:
Q  4 ttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||||||||||||||||   |||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||    
T  1533654 ttctcattgattaccactatattttgctccacacatctttgt---tttcattggtgtgagttt-taaccggattcacaaca 1533730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 21812443 - 21812501
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  21812443 tctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 21812501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 21645892 - 21645818
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| ||||||||||  |  |||||||||||||| |||||||   |||||||||||||||  ||||||||||||||||    
T  21645892 ctcatagattaccactcccttttgctccacacatctttgttta---cattggtgtgagttt-taaccggattcacaaca 21645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22173395 - 22173484
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||      ||||| ||||||||||||||||    
T  22173395 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaagatttgtttgaaaccggattcacaaca 22173484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18656316 - 18656228
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||       |||||||||||||||||||||    
T  18656316 ttgttctcattgattaccaccatcacttgctccacacatcattgtat-tttcattggtgtgaaggtttctttggaaccggattcacaaca 18656228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 7167126 - 7167051
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||  ||||||||||||||||    
T  7167126 ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-caaccggattcacaaca 7167051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 2671802 - 2671876
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||| ||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||  ||||||||||||||||    
T  2671802 ctcatagattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttt-taaccggattcacaaca 2671876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 40373013 - 40373085
Alignment:
Q  8 cattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||||||||||||| ||||||||||||| | ||||   ||||||||||||||||||  ||||||||||||||||    
T  40373013 cattgattaccactatctcttgctccacacacctttgt---tttcattggtgtgagttt-taaccggattcacaaca 40373085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 8477242 - 8477171
Alignment:
Q  10 ttgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    |||||||||||||||  |||||||||||||| ||||   ||||||||||||||||||   |||||||||||||||    
T  8477242 ttgattaccactatcttttgctccacacatctttgt---tttcattggtgtgagttttataccggattcacaaca 8477171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 2673136 - 2673195
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    |||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2673136 tctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 2677292 - 2677351
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    |||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2677292 tctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2677351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 8512096 - 8512037
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 62  Q
    |||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  8512096 tctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 8512037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 8516976 - 8516917
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 62  Q
    |||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  8516976 tctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 8516917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 10207813 - 10207755
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 62  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  10207813 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 10207755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 28504068 - 28504145
Alignment:
Q  4 ttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 84  Q
    ||||||| ||||| ||||| |  ||||||||||||||||||||   ||||||||||||||||  | |||||||||||||||    
T  28504068 ttctcatagattatcactaccttttgctccacacatcattgtt--attcattggtgtgagttaag-accggattcacaaca 28504145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 8739280 - 8739335
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagt 64  Q
    ||||| ||||||||||||  ||||||||||||||| ||||   ||||||||||||||||    
T  8739280 ctcatagattaccactatttcttgctccacacatctttgt---tttcattggtgtgagt 8739335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 9091518 - 9091573
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagt 64  Q
    ||||| ||||||||||||  ||||||||||||||| ||||   ||||||||||||||||    
T  9091518 ctcatagattaccactatttcttgctccacacatctttgt---tttcattggtgtgagt 9091573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35262 - 35323
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35262 ttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 35323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34149 - 34239
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||       |||||||||||||||||||||    
T  34149 ttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtgaaggtttctttggaaccggattcacaaca 34239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 9844 - 9930
Alignment:
Q  5 tctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga------gtttggaaccggattcacaaca 84  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||      ||||| ||||||||||||||||    
T  9844 tctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 9930  T

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Target: scaffold0355; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 101 - 143
Alignment:
Q  21 tatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  101 tatcacttgctccacacatcattggtttatttaattggtgtga 143  T

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Target: scaffold0479 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13233 - 13171
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||    
T  13233 ttgttctcattgattatcactatcacttgctccacatatctttggtttatttcattggtgtga 13171  T

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Target: scaffold0464 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 247 - 185
Alignment:
Q  1 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 62  Q
    |||||||||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||    
T  247 ttgttctcattgattatcaccatcacttgctccacacatctttggtttatttcattggtgtga 185  T

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Target: scaffold0978 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 453 - 510
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt 66  Q
    ||||| ||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||    
T  453 ctcatagattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttt 510  T

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Target: scaffold0197 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 19370 - 19428
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 62  Q
    ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  19370 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 19428  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 149161 - 149219
Alignment:
Q  6 ctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 62  Q
    ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  149161 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 149219  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 24278 - 24332
Alignment:
Q  27 ttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacac 85  Q
    |||||||||||||| |||||||   |||||||||||||||  |||||||||||||||||    
T  24278 ttgctccacacatctttgttta---cattggtgtgagttt-taaccggattcacaacac 24332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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