View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19401_high_27 (Length: 266)
Name: NF19401_high_27
Description: NF19401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19401_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 20013703 - 20013934
Alignment:
| Q |
15 |
tcataaagggagataaagcttcacaaacatatattttaccaaaggtcataaattactttgatcacaatctcttttttgttggaaaaagtactttaataag |
114 |
Q |
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| T |
20013703 |
tcataaagggagataaagcttcacaaacatatattttaccaaaggtcataaattactttgatcacaatctcttttttgttggaaaaagtactttaataag |
20013802 |
T |
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| Q |
115 |
taagtaattcttattttcattcacaagaactaaatatctaaaaatcattgaaaaggaaatttgaagctgaggcaggttagtttctcttgccccaattcta |
214 |
Q |
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||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
20013803 |
----taattcttattttcattcacaagaactgaatatctaaaaatcgttgaaaaggaaatttgaagctgaggcaggttagtttctcttgccccaatccta |
20013898 |
T |
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| Q |
215 |
cgtttgttaacacaaaatggcaatgcacgaggaaat |
250 |
Q |
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| T |
20013899 |
cgtttgttaacacaaaatggcaatgcacgaggaaat |
20013934 |
T |
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