View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19401_low_3 (Length: 556)

Name: NF19401_low_3
Description: NF19401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19401_low_3
NF19401_low_3
[»] chr6 (63 HSPs)
chr6 (177-349)||(5157493-5157665)
chr6 (177-347)||(5066561-5066731)
chr6 (344-537)||(5350629-5350822)
chr6 (344-538)||(5157274-5157468)
chr6 (177-347)||(5425954-5426124)
chr6 (181-345)||(5128286-5128450)
chr6 (344-538)||(5128063-5128257)
chr6 (181-345)||(5370619-5370783)
chr6 (181-347)||(5096756-5096922)
chr6 (177-347)||(5350438-5350602)
chr6 (177-334)||(5176783-5176940)
chr6 (14-151)||(5434102-5434239)
chr6 (177-349)||(5354479-5354651)
chr6 (177-342)||(5073780-5073945)
chr6 (177-334)||(5278610-5278767)
chr6 (344-538)||(5102260-5102454)
chr6 (344-538)||(5137312-5137506)
chr6 (344-538)||(5370812-5371006)
chr6 (344-525)||(5426151-5426332)
chr6 (181-341)||(5102487-5102647)
chr6 (177-341)||(5434079-5434243)
chr6 (177-346)||(5396994-5397163)
chr6 (344-538)||(5096949-5097143)
chr6 (177-347)||(5181794-5181964)
chr6 (353-538)||(5447831-5448016)
chr6 (177-334)||(5690039-5690196)
chr6 (344-522)||(5383567-5383745)
chr6 (177-339)||(5447631-5447793)
chr6 (177-346)||(5284257-5284426)
chr6 (177-334)||(5344905-5345062)
chr6 (14-156)||(5066566-5066708)
chr6 (14-148)||(5176806-5176940)
chr6 (216-334)||(5243793-5243911)
chr6 (14-165)||(5181790-5181941)
chr6 (14-148)||(5278633-5278767)
chr6 (19-156)||(5157500-5157637)
chr6 (177-346)||(5383370-5383539)
chr6 (19-151)||(5102491-5102623)
chr6 (22-165)||(5073771-5073914)
chr6 (14-150)||(5128295-5128431)
chr6 (14-165)||(5425977-5426128)
chr6 (30-148)||(5243793-5243911)
chr6 (14-148)||(5344928-5345062)
chr6 (14-151)||(5350461-5350592)
chr6 (343-488)||(5066390-5066535)
chr6 (19-156)||(5354486-5354623)
chr6 (14-150)||(5370638-5370774)
chr6 (14-148)||(5397017-5397151)
chr6 (19-148)||(5690039-5690168)
chr6 (14-163)||(5096775-5096924)
chr6 (344-512)||(5278810-5278978)
chr6 (22-92)||(5284325-5284395)
chr6 (14-151)||(5447654-5447791)
chr6 (344-512)||(5176983-5177151)
chr6 (413-538)||(2938402-2938527)
chr6 (449-509)||(5073583-5073643)
chr6 (203-323)||(5281370-5281490)
chr6 (344-512)||(5689831-5689999)
chr6 (177-327)||(5257221-5257371)
chr6 (313-345)||(5137535-5137567)
chr6 (203-323)||(5179611-5179731)
chr6 (19-134)||(5281372-5281487)
chr6 (14-95)||(5257267-5257348)
[»] chr5 (9 HSPs)
chr5 (177-339)||(8877653-8877815)
chr5 (14-151)||(8877676-8877813)
chr5 (244-332)||(12599054-12599142)
chr5 (241-332)||(20838740-20838831)
chr5 (271-332)||(20812415-20812476)
chr5 (241-330)||(15803019-15803108)
chr5 (33-146)||(20838718-20838831)
chr5 (271-334)||(30417958-30418021)
chr5 (52-108)||(15803016-15803072)
[»] chr4 (33 HSPs)
chr4 (177-336)||(4344690-4344849)
chr4 (177-345)||(4123808-4123976)
chr4 (177-336)||(4361121-4361280)
chr4 (177-331)||(4320502-4320656)
chr4 (177-339)||(4335389-4335551)
chr4 (205-339)||(6498401-6498535)
chr4 (14-158)||(4344713-4344857)
chr4 (14-156)||(4123811-4123953)
chr4 (40-158)||(4361170-4361288)
chr4 (223-339)||(6675793-6675909)
chr4 (12-101)||(4335410-4335499)
chr4 (14-145)||(4320502-4320633)
chr4 (244-339)||(6588071-6588166)
chr4 (40-151)||(6675796-6675907)
chr4 (448-538)||(4361422-4361512)
chr4 (13-151)||(6498403-6498541)
chr4 (205-339)||(6545323-6545457)
chr4 (205-330)||(6621391-6621516)
chr4 (13-144)||(6651133-6651264)
chr4 (276-339)||(6728549-6728612)
chr4 (13-80)||(6815536-6815603)
chr4 (41-151)||(6758818-6758928)
chr4 (244-338)||(6822802-6822896)
chr4 (205-338)||(6753032-6753165)
chr4 (30-95)||(7885324-7885389)
chr4 (448-536)||(4344991-4345079)
chr4 (13-113)||(6753026-6753126)
chr4 (13-151)||(6545325-6545463)
chr4 (205-339)||(6815542-6815676)
chr4 (27-113)||(6822771-6822857)
chr4 (13-74)||(4133379-4133440)
chr4 (223-335)||(6532111-6532223)
chr4 (13-113)||(6728472-6728572)
[»] scaffold0294 (3 HSPs)
scaffold0294 (177-348)||(8766-8937)
scaffold0294 (344-446)||(8638-8740)
scaffold0294 (472-531)||(8572-8631)
[»] chr7 (5 HSPs)
chr7 (177-336)||(36213707-36213866)
chr7 (14-150)||(36213707-36213843)
chr7 (453-520)||(36213493-36213560)
chr7 (13-95)||(18935452-18935534)
chr7 (216-336)||(18935469-18935589)
[»] chr3 (6 HSPs)
chr3 (274-347)||(47986739-47986812)
chr3 (274-347)||(47996026-47996099)
chr3 (274-347)||(48005313-48005386)
chr3 (274-347)||(48014598-48014671)
chr3 (270-334)||(6905806-6905870)
chr3 (271-334)||(32411083-32411146)
[»] chr8 (13 HSPs)
chr8 (233-334)||(3391536-3391637)
chr8 (223-332)||(3262629-3262737)
chr8 (233-334)||(3364269-3364370)
chr8 (271-334)||(3407323-3407386)
chr8 (241-332)||(31175955-31176046)
chr8 (271-333)||(3286516-3286578)
chr8 (273-331)||(3314998-3315056)
chr8 (47-148)||(3391536-3391637)
chr8 (272-332)||(7164654-7164714)
chr8 (33-147)||(3286516-3286630)
chr8 (47-105)||(3364269-3364327)
chr8 (42-74)||(3262700-3262732)
chr8 (271-331)||(3325003-3325063)
[»] chr2 (2 HSPs)
chr2 (177-334)||(22584094-22584251)
chr2 (50-117)||(14766978-14767045)
[»] scaffold0468 (1 HSPs)
scaffold0468 (270-334)||(6146-6210)
[»] scaffold0286 (1 HSPs)
scaffold0286 (205-330)||(6731-6856)
[»] scaffold0813 (1 HSPs)
scaffold0813 (13-144)||(4710-4841)
[»] scaffold0552 (1 HSPs)
scaffold0552 (13-80)||(8233-8300)


Alignment Details
Target: chr6 (Bit Score: 129; Significance: 2e-66; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 177 - 349
Target Start/End: Complemental strand, 5157665 - 5157493
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||    
T  5157665 atctttaaccactctgcttgcacacgacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatctctttgggcggctat 5157566  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatctc 349  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  5157565 gaaggattttctcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcccatctc 5157493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 177 - 347
Target Start/End: Complemental strand, 5066731 - 5066561
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| ||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  5066731 atctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5066632  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    |||||||| || |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  5066631 gaaggattctcgcgtgatgtgtttccatctatcattttgtcttggatgtcaccaacaaataatctcccatc 5066561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 344 - 537
Target Start/End: Original strand, 5350629 - 5350822
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    ||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||||| |||| | ||  || |||||||    
T  5350629 catctcttgttcctttagatgtaccacatagtagttcccaggaactatcatcgatttcccagtgtcttccaagtcttcaaagtctttgtgtggagtgtag 5350728  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatca 537  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||| ||||| || ||||||||    
T  5350729 ctcggaacttcaactttctcatgatgcagcaataattttggatgccttgtatgccacaaattataaggagttggaatcaactacagctacatca 5350822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 344 - 538
Target Start/End: Complemental strand, 5157468 - 5157274
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    ||||||||||||||||| ||||||||||||||| ||| |  ||||||||||||||||||||||||||| |||||||||||||| | ||| || |||| ||    
T  5157468 catctcttgttcctttagatgtaccacatagtaattcccaggaactatcatcgatttcccagtgtcttccaagtcttcgaagtctatgggtggagtgcag 5157369  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||||||||||| | |||||||||||| || |||||||||    
T  5157368 ctcggaacttcaactttctcatgatgcagcaataattttggatgccctgtatgccacaaattctaagaatttggaaccaactacagctacatcac 5157274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 177 - 347
Target Start/End: Original strand, 5425954 - 5426124
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| | ||||| | || ||||||||||||||||||||||||||||| || | |||| |||||||||||||||||||||||| ||| |||    
T  5425954 atctttaaccactctgattgcacataaaactgcaataaaaagagtacccttttcagtggtaatgtcacaaagcattggatacatctctttgtgcggctat 5426053  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    ||||||||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||    
T  5426054 gaaggattttcacgtgatgtgtttccagcgatcatttggtcttggatgtcaccaacaaataatctcccatc 5426124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 181 - 345
Target Start/End: Complemental strand, 5128450 - 5128286
Alignment:
Q  181 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaag 280  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||  ||||||    
T  5128450 ttaacaactctgcttgcaaataacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatatatctctctgtgcggccatgaag 5128351  T
Q  281 gattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctccca 345  Q
    |||||||| ||||||||||||||||| | || |||||||||||||||||||||||| ||||||||    
T  5128350 gattttcaagtgatgtgtttccatctatcatctggtcttggatgtcaccaacaaatgatctccca 5128286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 344 - 538
Target Start/End: Complemental strand, 5128257 - 5128063
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    |||||||||||||| || ||||||||||||||||||| | ||||||||| ||||| |||||||  ||| |||||||||||||| | ||| || |||| ||    
T  5128257 catctcttgttcctctagatgtaccacatagtagttcccacgaactatcgtcgatgtcccagtaccttccaagtcttcgaagtctttggatggagtgcag 5128158  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
    ||| ||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||| |||||||| ||||||||    
T  5128157 ctcagaacttcaactttctcatgatgcagcaataattttggatgccttgtatgccacaaattataaggagttggaacaaactgcaagtacatcac 5128063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 181 - 345
Target Start/End: Original strand, 5370619 - 5370783
Alignment:
Q  181 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaag 280  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| || ||||  ||  ||| ||    
T  5370619 ttaaccactctgcttgcaaataacactgcaataaaaagggtacccttttcagtagtacggtcaaaaagcattggatacatttcattgtgtggccatgtag 5370718  T
Q  281 gattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctccca 345  Q
    ||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  5370719 gattttcacatgatgtttttccatctatcatttggtcttggatgtcaccaacaaattatctccca 5370783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 5096756 - 5096922
Alignment:
Q  181 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaag 280  Q
    ||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |  ||  ||||||    
T  5096756 ttaaccattctgcttgcaaataacactggaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatttctctatgtggccatgaag 5096855  T
Q  281 gattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    |||||||||||||||||||||| ||| | || ||||||||| |||||||||||||||||||| ||||    
T  5096856 gattttcacgtgatgtgtttccgtctatcatctggtcttggttgtcaccaacaaataatctctcatc 5096922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 177 - 347
Target Start/End: Original strand, 5350438 - 5350602
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| ||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  5350438 atctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5350537  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    ||||||||||||||||||||||||  |||    |||   ||||||||||||||||||||||||| ||||||    
T  5350538 gaaggattttcacgtgatgtgttt--atc----attcattcttggatgtcaccaacaaataatcacccatc 5350602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 177 - 334
Target Start/End: Original strand, 5176783 - 5176940
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||| |||| ||||||||| ||||||||||||| |||||| ||||| ||| |||| ||||||||||||||||||||||||||||||| ||| |||    
T  5176783 atctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtcaatagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5176882  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||||||| ||||||||| | ||||||||  | |||||||||||||||||||||||||    
T  5176883 gaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa 5176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 5434102 - 5434239
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||    
T  5434102 ataacactgcaataaaaagagtgcctctttcagtactgagatcaaaaagcattggatatatctctttgtgcggttatgaaggattctcacacgatttatt 5434201  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaata 151  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  5434202 tccatttatcattcagtcttggatgtcaccaacaaata 5434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 177 - 349
Target Start/End: Complemental strand, 5354651 - 5354479
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||| | |||||||||  |||||||||||| |||||||||||| ||| |||| || || |||||||||||||| || ||||| |  || |||    
T  5354651 atctttaaccaccctgcttgcaaatgacactgcaataacaagagtacccttctcaatagttagttccaaaagcattggatatatttctttatgtggctat 5354552  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatctc 349  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  5354551 gaaggattctcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctccgatctc 5354479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 177 - 342
Target Start/End: Complemental strand, 5073945 - 5073780
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| | | ||||| ||||| ||||||| |||||| |||||||||||||| ||||| |||||||||||||| || ||||||| ||| |||    
T  5073945 atctttaaccactctgatagcaaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatatttctttgtgcggctat 5073846  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctc 342  Q
    |||||||| |||||||||||||| |||||  | |||||||||||||||||||| ||||||||||||    
T  5073845 gaaggattctcacgtgatgtgttcccatcgatcatttggtcttggatgtcaccgacaaataatctc 5073780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 177 - 334
Target Start/End: Original strand, 5278610 - 5278767
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||| |||| ||||||||| ||||||||||||| |||||| ||||| ||  |||| ||||||||||||||||||||||||||||||| ||| |||    
T  5278610 atctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtctatagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5278709  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||||||| ||||||||| | ||||||||  | |||||||||||||||||||||||||    
T  5278710 gaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa 5278767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 344 - 538
Target Start/End: Complemental strand, 5102454 - 5102260
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    |||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||  ||  ||| ||| |||||||||| | ||| || |||| ||    
T  5102454 catctcttgttcctctagatgtaccacatagtagttcccacgaactatcatcgatttccatgtaccttccaaatcttcgaagtctttgggtggagtgcag 5102355  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
     || |||| |||||||| ||||||||||||||| ||||||||||||||  || ||| ||||  ||||||||||||||||||||||||||| ||||    
T  5102354 ttcagaacgtcaactttctcatgatgcagcaataattttggatgccttgcataccataaatcgtaaggagttggaaccaactgcaactacgtcac 5102260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 344 - 538
Target Start/End: Complemental strand, 5137506 - 5137312
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    |||||||||||||| || ||||||||||||||||||| | ||||||||||||||||| |  ||  ||| |||||||||||||| | ||| || |||| ||    
T  5137506 catctcttgttcctctagatgtaccacatagtagttcccacgaactatcatcgattttcgtgtaccttccaagtcttcgaagtctttgggtggagtgcag 5137407  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
     || |||| |||||||| ||||||||||||||| ||||||||||||||  || ||| ||||  ||||||||||||||||||||||||||| ||||    
T  5137406 ttcagaacgtcaactttctcatgatgcagcaataattttggatgccttgcataccataaatcgtaaggagttggaaccaactgcaactacgtcac 5137312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 344 - 538
Target Start/End: Original strand, 5370812 - 5371006
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    ||||||||||||||||| ||||||||||||||||||| |  ||||||||||| |||| | |||  ||| ||| |||||||||| | ||| || | |||||    
T  5370812 catctcttgttcctttagatgtaccacatagtagttcccatgaactatcatcaattttcaagtaccttccaattcttcgaagtctttgggtggaatgtag 5370911  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| |||| |||| | | ||| ||||||| ||||||||||||||| ||||||||    
T  5370912 ctcggaacttcaactttctcatgatgcagcaacaattttggatgtcttatatgcgatagattataaggagatggaaccaactgcaattacatcac 5371006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 344 - 525
Target Start/End: Original strand, 5426151 - 5426332
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    ||||||||||||||||| ||||||||||||||| ||| |  ||||||||||||||||||||||  ||| ||| ||||| |||  | ||| || |||| ||    
T  5426151 catctcttgttcctttagatgtaccacatagtaattcccaggaactatcatcgatttcccagtaccttccaaatcttcaaaggctttgggtggagtgcag 5426250  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaact 525  Q
    ||| ||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||| || |||||||||||||||||||    
T  5426251 ctcagaacttcaactttctcatgatgcagcaataattttagatgccttgtatgccacaagttataaggagttggaaccaact 5426332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 5102647 - 5102487
Alignment:
Q  181 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaag 280  Q
    ||||||||||  || ||||| ||||||||||||| || ||| |||||||||||||| |||||||||||||||||||| |||||| | |  || |||||||    
T  5102647 ttaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtagtaaggtcaaaaagcattggatatatctctctatgtggctatgaag 5102548  T
Q  281 gattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatct 341  Q
    || |||||| |||||||||||||||| | || |||||||||||||||||||||||||||||    
T  5102547 gactttcacatgatgtgtttccatctatcatctggtcttggatgtcaccaacaaataatct 5102487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 177 - 341
Target Start/End: Original strand, 5434079 - 5434243
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| ||  |||||||| |||| ||||||||||||||||| |||||||||| ||| |||    
T  5434079 atctttaaccactctgcttgcaaataacactgcaataaaaagagtgcctctttcagtactgagatcaaaaagcattggatatatctctttgtgcggttat 5434178  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatct 341  Q
    |||||||| ||||  ||| | ||||||| | | |||  |||||||||||||||||||||||||||    
T  5434179 gaaggattctcacacgatttatttccatttatcattcagtcttggatgtcaccaacaaataatct 5434243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 177 - 346
Target Start/End: Original strand, 5396994 - 5397163
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||||||   | ||||||| |||||||||||||||||||| || |||||| |  | |||| ||||||||||||||  |||||||||| |||||||    
T  5396994 atctttaaccaccttggttgcaaataacactgcaataaaaagagtgccgttttcaattttaaggttaaaaagcattggatttatctctttgtgcggatat 5397093  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccat 346  Q
    |||||||||||| |||| ||||||||| || | |||| |||||||||||||||||||| ||| |||||||    
T  5397094 gaaggattttcatgtgaagtgtttccagctatcatttcgtcttggatgtcaccaacaattaacctcccat 5397163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 344 - 538
Target Start/End: Original strand, 5096949 - 5097143
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    |||| |||||| || || |||||||| |||||||||| |  ||||||| |||||||||| |||  ||| |||||||||||||| | ||| || |||| ||    
T  5096949 catcccttgtttctgtagatgtaccaaatagtagttcccatgaactattatcgatttccaagtaccttccaagtcttcgaagtctttgggtggagtgcag 5097048  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
    ||| ||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||| ||| ||||| ||| ||| ||| ||||| ||||||||    
T  5097049 ctcagaacttcaactttctcatgatgctgcaataattttggatgccttatatgccacagattataaggggtttgaatcaattgcaattacatcac 5097143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 177 - 347
Target Start/End: Complemental strand, 5181964 - 5181794
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||||||   | ||||||| ||||||||||||| |||||| || ||||||||||| | ||| |||||||||| ||| || || ||||  ||||||    
T  5181964 atctttaaccacattgattgcaaataacactgcaataacaagagtgccgttttcagtagtaaagtccaaaagcattgcatatatttccttgtgtggatat 5181865  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    |||||||| |||| ||||||||||||| |  | |||||||||||||||||||| |||||||||||||||||    
T  5181864 gaaggattctcacatgatgtgtttccagcgatcatttggtcttggatgtcaccgacaaataatctcccatc 5181794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 353 - 538
Target Start/End: Original strand, 5447831 - 5448016
Alignment:
Q  353 ttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtagctcggaact 452  Q
    |||||| | |||||||||| ||||||||||  |||||||||||| |||||||||  ||  |||||||||||||| | ||| || |||  ||||| |||||    
T  5447831 ttccttcagatgtaccacacagtagttctcaggaactatcatcgttttcccagtacctaccaagtcttcgaagtctttgggtgcagttcagctcagaact 5447930  T
Q  453 tcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
    |||||||| |||||| |||||||| ||||||||||| ||  |||||||||||| |||||||||||||| ||| |||  ||||||||    
T  5447931 tcaactttctcatgaggcagcaataattttggatgctttgtatgccacaaattataaggagttggaactaacggcagttacatcac 5448016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 177 - 334
Target Start/End: Complemental strand, 5690196 - 5690039
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| |||||||||  |||||| ||||| ||| || ||||||||| | || ||||||||||||||||| || || ||| ||| |||| ||    
T  5690196 atctttaaccactctgcttgcaaatgacactggaataacaagtgtgcccttttcaattgtaaggtcaaaaagcattgggtatatttctctgtgcggacat 5690097  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||||||| ||||||||| | ||||||||| | |||||||||||||||||||||||||    
T  5690096 gaaggattctcacgtgatatatttccatctatcatttggtcttggatgtcaccaacaa 5690039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 344 - 522
Target Start/End: Original strand, 5383567 - 5383745
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    |||||| |||||||||  ||||||||| ||||||||| |  || |||||||| |||||| |||  ||| ||||| |||| ||| | ||| ||||||||||    
T  5383567 catctcatgttcctttcgatgtaccacgtagtagttcccatgacctatcatcaatttccaagtaccttccaagtattcgcagtctttgggtgaagtgtag 5383666  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaacca 522  Q
    ||||||||||||| ||| ||||||||| ||||| |||||||| |||||| ||||| |||||||||| || |||||||||    
T  5383667 ctcggaacttcaagtttctcatgatgctgcaattattttggaagccttatatgccgcaaattctaaagaattggaacca 5383745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 177 - 339
Target Start/End: Original strand, 5447631 - 5447793
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| ||||||||| || ||| |||||| || ||| |||||||| ||||| ||||| || ||||||||||| || ||||||| ||||| |    
T  5447631 atctttaaccactctgcttgcaaataatacttcaataacaacagtgcccttttcggtagttaggtcgaagagcattggatatatttctttgtgcggattt 5447730  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataat 339  Q
    |||||||  || | |||||||||||||||| | ||| |||||||||||||||||| |||||||    
T  5447731 gaaggatcctcgcatgatgtgtttccatctattattcggtcttggatgtcaccaagaaataat 5447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 177 - 346
Target Start/End: Complemental strand, 5284426 - 5284257
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| | | || || ||||| ||||||| |||||| |||||||||||||| ||||| |||||||||||||| ||  |||||| ||| |||    
T  5284426 atctttaaccactctgatagctaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatattgctttgtgcggttat 5284327  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccat 346  Q
    || ||| ||||| | |||||||||||||   |||||| ||| ||||||||| ||||||||||||||||||    
T  5284326 gagggactttcaagcgatgtgtttccattaataattttgtcatggatgtcagcaacaaataatctcccat 5284257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 177 - 334
Target Start/End: Original strand, 5344905 - 5345062
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||||| || | | ||||| ||||||||||||| || ||| ||||||| |||||| |||||||||||||||||||| || ||| |||  || |||    
T  5344905 atctttaaccattctgatcgcaaataacactgcaataacaaaagttccctttttagtagtaaggtcaaaaagcattggatatatttctctgtgtggctat 5345004  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||||||| ||||| ||||| ||||||||| | || ||||||||||||||||||||||    
T  5345005 gaaggattctcacgcgatgtatttccatctatcatctggtcttggatgtcaccaacaa 5345062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 5066708 - 5066566
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||||||||||||| | || |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||| | |||| | ||    
T  5066708 ataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcgcgtgatgtgtt 5066609  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaatagtctc 156  Q
    ||||  |||||||  |||||| |||||||||||||||| ||||    
T  5066608 tccatctatcattttgtcttggatgtcaccaacaaataatctc 5066566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 5176806 - 5176940
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| |||||||||| ||||||||| || ||| ||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||||| |||||||||    
T  5176806 ataacactgcaataacaagagtgcccttgtcaatagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcacgtgatatatt 5176905  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaa 148  Q
    ||||   ||||||  |||||| |||||||||||||    
T  5176906 tccatcaatcatttggtcttggatgtcaccaacaa 5176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 5243911 - 5243793
Alignment:
Q  216 aagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttgg 315  Q
    |||||| |||||||||||||| |||||||||||||| ||||| || |||||||  || ||||||||||||||||| ||||| ||||||||| | || |||    
T  5243911 aagagtgcccttttcagtagtaaggtcaaaaagcatcggatatatttctttgtgtggctatgaaggattttcacgcgatgtatttccatctatcatctgg 5243812  T
Q  316 tcttggatgtcaccaacaa 334  Q
    |||||||||||||||||||    
T  5243811 tcttggatgtcaccaacaa 5243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 5181941 - 5181790
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| |||||||||| |||||||||||||||||||||||  || |||||||||| |||||| || |||||||| |||||||| |||||||||||| | ||    
T  5181941 ataacactgcaataacaagagtgccgttttcagtagtaaagtccaaaagcattgcatatatttccttgtgtggatatgaaggattctcacatgatgtgtt 5181842  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctcttcccca 165  Q
    ||||   ||||||  |||||| |||||||| ||||||| |||| | ||||||    
T  5181841 tccagcgatcatttggtcttggatgtcaccgacaaataatctcccatcccca 5181790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 5278633 - 5278767
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| |||||||||| ||||||||| || ||  ||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||||| |||||||||    
T  5278633 ataacactgcaataacaagagtgcccttgtctatagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcacgtgatatatt 5278732  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaa 148  Q
    ||||   ||||||  |||||| |||||||||||||    
T  5278733 tccatcaatcatttggtcttggatgtcaccaacaa 5278767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 5157637 - 5157500
Alignment:
Q  19 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 118  Q
    ||||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||| | || |||||||| || || | |||| | ||||||     
T  5157637 actgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatctctttgggcggctatgaaggattttctcgtgatgtgtttccat 5157538  T
Q  119 ttatcattcagtcttgtatgtcaccaacaaatagtctc 156  Q
     |||||||  |||||| |||||||||||||||| ||||    
T  5157537 ctatcatttggtcttggatgtcaccaacaaataatctc 5157500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 346
Target Start/End: Original strand, 5383370 - 5383539
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||| |||  ||||||| | ||||||||||||| |||||| ||| ||||| |  | ||||||||||| |||| ||| || ||||||| |||  ||    
T  5383370 atctttaactactttgcttgcagataacactgcaataacaagagttcccctttcaattttaaggtcaaaaagtattgtatatatttctttgtgcggccat 5383469  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccat 346  Q
    |||||||| ||||||||||||||||||||  | |||  ||||||||||||  ||||||||||||||||||    
T  5383470 gaaggattctcacgtgatgtgtttccatccatcattaagtcttggatgtcctcaacaaataatctcccat 5383539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 5102623 - 5102491
Alignment:
Q  19 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 118  Q
    |||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||  | ||||||||| | ||||||     
T  5102623 actgcaataacaacagtgcccttttcagtagtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 5102524  T
Q  119 ttatcattcagtcttgtatgtcaccaacaaata 151  Q
     ||||||   |||||| ||||||||||||||||    
T  5102523 ctatcatctggtcttggatgtcaccaacaaata 5102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 5073914 - 5073771
Alignment:
Q  22 gcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccactta 121  Q
    ||||||| ||||||||| |||||||||||||| || ||||||||||||||||| |||||||| || |||||||| ||||||| |||| | || |||   |    
T  5073914 gcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatatttctttgtgcggctatgaaggattctcacgtgatgtgttcccatcga 5073815  T
Q  122 tcattcagtcttgtatgtcaccaacaaatagtctctcttcccca 165  Q
    |||||  |||||| |||||||| ||||||| |||| ||||||||    
T  5073814 tcatttggtcttggatgtcaccgacaaataatctcacttcccca 5073771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 5128431 - 5128295
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| |||| ||  ||||||| || |||  |||| | ||    
T  5128431 ataacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatatatctctctgtgcggccatgaaggattttcaagtgatgtgtt 5128332  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaat 150  Q
    ||||  ||||||   |||||| |||||||||||||||    
T  5128331 tccatctatcatctggtcttggatgtcaccaacaaat 5128295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 5425977 - 5426128
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||||||||||||||| || |||||||| ||||  ||| ||||||||||||| ||||||||||| || |||||||| || |||| |||| | ||    
T  5425977 ataaaactgcaataaaaagagtacccttttcagtggtaatgtcacaaagcattggatacatctctttgtgcggctatgaaggattttcacgtgatgtgtt 5426076  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctcttcccca 165  Q
    ||||   ||||||  |||||| |||||||||||||||| |||| | ||||||    
T  5426077 tccagcgatcatttggtcttggatgtcaccaacaaataatctcccatcccca 5426128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 5243911 - 5243793
Alignment:
Q  30 aagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcag 129  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||| || ||||  ||| ||||||||  ||||||   |    
T  5243911 aagagtgcccttttcagtagtaaggtcaaaaagcatcggatatatttctttgtgtggctatgaaggattttcacgcgatgtatttccatctatcatctgg 5243812  T
Q  130 tcttgtatgtcaccaacaa 148  Q
    ||||| |||||||||||||    
T  5243811 tcttggatgtcaccaacaa 5243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 5344928 - 5345062
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| |||||||||| || ||| || |||| ||||||||| |||||||||||||||||||| ||| ||||||| |||||||| |||||||  ||| ||||    
T  5344928 ataacactgcaataacaaaagttccctttttagtagtaaggtcaaaaagcattggatatatttctctgtgtggctatgaaggattctcacgcgatgtatt 5345027  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaa 148  Q
    ||||  ||||||   |||||| |||||||||||||    
T  5345028 tccatctatcatctggtcttggatgtcaccaacaa 5345062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 5350461 - 5350592
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||||||||||||| | || |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| || |||| |||| | |     
T  5350461 ataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattttcacgtgatgtgt- 5350559  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaata 151  Q
         |||||||||| ||||| ||||||||||||||||    
T  5350560 -----ttatcattcattcttggatgtcaccaacaaata 5350592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 5066535 - 5066390
Alignment:
Q  343 ccatctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgta 442  Q
    |||||||||||||||||| |||||||||||||||| || |  ||||||||||| |||||| |||  ||| |||||||||||||| | ||| || |||| |    
T  5066535 ccatctcttgttcctttagatgtaccacatagtagctcccatgaactatcatcaatttccaagtaccttccaagtcttcgaagtctttgggtggagtgca 5066436  T
Q  443 gctcggaacttcaactttgtcatgatgcagcaatgattttggatgc 488  Q
    | || |||| |||||||| | |||||||| |||| || ||||||||    
T  5066435 gttcagaacatcaactttctaatgatgcaacaataatattggatgc 5066390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 5354623 - 5354486
Alignment:
Q  19 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 118  Q
    |||||||||| |||||| || || ||| |||| || || ||||||||||||||||| ||||| ||||| |||||||| ||||||| |||| | ||||||     
T  5354623 actgcaataacaagagtacccttctcaatagttagttccaaaagcattggatatatttctttatgtggctatgaaggattctcacgtgatgtgtttccat 5354524  T
Q  119 ttatcattcagtcttgtatgtcaccaacaaatagtctc 156  Q
     |||||||  |||||| |||||||||||||||| ||||    
T  5354523 ctatcatttggtcttggatgtcaccaacaaataatctc 5354486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 5370638 - 5370774
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| |||||||||||||| || || |||||||||||| | ||||||||||||||||| || || ||||||||  ||| ||| || ||||||||| | ||    
T  5370638 ataacactgcaataaaaagggtacccttttcagtagtacggtcaaaaagcattggatacatttcattgtgtggccatgtaggattttcacatgatgtttt 5370737  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaat 150  Q
    ||||  |||||||  |||||| |||||||||||||||    
T  5370738 tccatctatcatttggtcttggatgtcaccaacaaat 5370774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 5397017 - 5397151
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||||||||||||||||||||||||| |  |||| | |||||||||||||| |||||||||||| || |||||||| || |||  |||  | ||    
T  5397017 ataacactgcaataaaaagagtgccgttttcaattttaaggttaaaaagcattggatttatctctttgtgcggatatgaaggattttcatgtgaagtgtt 5397116  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaa 148  Q
    ||||  |||||||  |||||| |||||||||||||    
T  5397117 tccagctatcatttcgtcttggatgtcaccaacaa 5397151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 5690168 - 5690039
Alignment:
Q  19 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 118  Q
    |||| ||||| ||| ||||| |||||| | ||||| |||||||||||||| ||||| ||| |||| ||  ||||||| ||||||| |||||||||||||     
T  5690168 actggaataacaagtgtgcccttttcaattgtaaggtcaaaaagcattgggtatatttctctgtgcggacatgaaggattctcacgtgatatatttccat 5690069  T
Q  119 ttatcattcagtcttgtatgtcaccaacaa 148  Q
     |||||||  |||||| |||||||||||||    
T  5690068 ctatcatttggtcttggatgtcaccaacaa 5690039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 5096775 - 5096924
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| |||| |||||||||||| || |||||||||||||| ||||||||||||||||| || ||| | |||||  ||||||| || |||| |||| | ||    
T  5096775 ataacactggaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatttctctatgtggccatgaaggattttcacgtgatgtgtt 5096874  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctcttccc 163  Q
    |||   ||||||   ||||||  ||||||||||||||| |||||| ||||    
T  5096875 tccgtctatcatctggtcttggttgtcaccaacaaataatctctcatccc 5096924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 5278810 - 5278978
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    ||||||||||| ||||| || ||||||||||||||||||  ||||| ||||| |||||| |    |||||||| ||||||||| | ||| |  ||||| |    
T  5278810 catctcttgtttctttagatataccacatagtagttctcaggaactgtcatctatttccgaccacctttcaaggcttcgaagtctatgggtagagtgtgg 5278909  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaagga 512  Q
     || ||||||||||||| |   ||||||  ||| ||||||||||| ||| ||||||||| |||||||||    
T  5278910 ttcagaacttcaactttctgtagatgcaaaaatcattttggatgctttatatgccacaatttctaagga 5278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 5284395 - 5284325
Alignment:
Q  22 gcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatga 92  Q
    ||||||| ||||||||| |||||||||||||| || |||||||||||||||||  ||||||| ||||||||    
T  5284395 gcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatattgctttgtgcggttatga 5284325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 5447654 - 5447791
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||||||| |||||| || |||||| ||||| ||||| || || || |||||||||||||| |||||||| || | |||||| | ||| |||||| | ||    
T  5447654 ataatacttcaataacaacagtgcccttttcggtagttaggtcgaagagcattggatatatttctttgtgcggatttgaaggatcctcgcatgatgtgtt 5447753  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaata 151  Q
    ||||  ||| |||| |||||| |||||||||| |||||    
T  5447754 tccatctattattcggtcttggatgtcaccaagaaata 5447791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 5176983 - 5177151
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    ||||||| ||| ||||| || ||||||||||||||||||  ||||| ||||| |||||| |    |||||||| ||||||||| | ||| |  ||||| |    
T  5176983 catctctcgtttctttagatataccacatagtagttctcaggaactgtcatctatttccgaccacctttcaaggcttcgaagtctatgggtagagtgtgg 5177082  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaagga 512  Q
     || ||||||||||||| |   ||||||  ||| ||||||||||| ||| ||||||||| |||||||||    
T  5177083 ttcagaacttcaactttctgtagatgcaaaaatcattttggatgctttatatgccacaatttctaagga 5177151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 538
Target Start/End: Original strand, 2938402 - 2938527
Alignment:
Q  413 caagtcttcgaagtatgtggctgaagtgtagctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaagga 512  Q
    ||||||||| |||| | ||| || | ||| |||| ||| ||||||||| ||||||||||||||   ||||||||| |||| |||| | | ||| ||||||    
T  2938402 caagtcttccaagtctttgggtggaatgttgctcagaatttcaactttctcatgatgcagcaacagttttggatgtcttatatgcgatagattataagga 2938501  T
Q  513 gttggaaccaactgcaactacatcac 538  Q
    | ||||||||||| ||| ||||||||    
T  2938502 gatggaaccaactacaattacatcac 2938527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 509
Target Start/End: Complemental strand, 5073643 - 5073583
Alignment:
Q  449 aacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaa 509  Q
    |||||||||||| ||| ||||||| ||  ||||||||||||||| ||||||||||||||||    
T  5073643 aacttcaactttctcaagatgcagaaagaattttggatgccttatatgccacaaattctaa 5073583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 323
Target Start/End: Original strand, 5281370 - 5281490
Alignment:
Q  203 acactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttcc 302  Q
    |||||||||||| |||||| |||||| ||||||  ||||  |||| ||||||||| || ||||| | ||| ||| ||||||| |||||||||||  ||||    
T  5281370 acactgcaataacaagagttccctttgcagtaggaaggttgaaaaacattggatatatttctttctgcggctataaaggattctcacgtgatgtagttcc 5281469  T
Q  303 atctctaatttggtcttggat 323  Q
    || | | ||| ||||||||||    
T  5281470 atatatcattcggtcttggat 5281490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 5689999 - 5689831
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    ||||||||||| ||||| || |||||  |||||||||||  ||||| ||||| |||||| |    |||||||| ||||||||| | ||| |  ||||| |    
T  5689999 catctcttgtttctttagatataccatgtagtagttctcaggaactgtcatctatttccaaccacctttcaaggcttcgaagtctatgggtagagtgtgg 5689900  T
Q  444 ctcggaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaagga 512  Q
     || ||||||||||||| | | ||||||  ||| ||||||||||| ||| | ||||||| |||||||||    
T  5689899 ttcagaacttcaactttctgaagatgcaaaaatcattttggatgctttatacgccacaatttctaagga 5689831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 327
Target Start/End: Complemental strand, 5257371 - 5257221
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||||||||   ||||||| ||||||||||||| |||||| || || |||||  | || ||||||||||| | ||   ||||||||  ||| |||    
T  5257371 atctttaaccactctaattgcaaataacactgcaataacaagagtgccattatcagttttaagatcaaaaagcatcgaatttgtctctttgcacggttat 5257272  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtca 327  Q
    |||||||||||| |   |||||||||||   | |||| |||||||||||||    
T  5257271 gaaggattttcaagcattgtgtttccattaatcattttgtcttggatgtca 5257221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 5137567 - 5137535
Alignment:
Q  313 tggtcttggatgtcaccaacaaataatctccca 345  Q
    |||||||||||||||||||||||||||||||||    
T  5137567 tggtcttggatgtcaccaacaaataatctccca 5137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 323
Target Start/End: Original strand, 5179611 - 5179731
Alignment:
Q  203 acactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttcc 302  Q
    ||||||||||||  ||||| |||||| ||||||  ||||  |||| ||||||||| || ||||| | ||| ||| ||||||| |||||||||||  ||||    
T  5179611 acactgcaataactagagttccctttgcagtaggaaggttgaaaaacattggatatatttctttctgcggctataaaggattctcacgtgatgtagttcc 5179710  T
Q  303 atctctaatttggtcttggat 323  Q
    || | | ||| ||||||||||    
T  5179711 atatatcattcggtcttggat 5179731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 5281372 - 5281487
Alignment:
Q  19 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 118  Q
    |||||||||| |||||| || ||| |||||| ||| |  |||| |||||||||||| ||||| || || ||| |||| ||||||| |||| || |||||     
T  5281372 actgcaataacaagagttccctttgcagtaggaaggttgaaaaacattggatatatttctttctgcggctataaaggattctcacgtgatgtagttccat 5281471  T
Q  119 ttatcattcagtcttg 134  Q
     |||||||| ||||||    
T  5281472 atatcattcggtcttg 5281487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 5257348 - 5257267
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagg 95  Q
    |||| |||||||||| ||||||||| || |||||  |||||||||||||||| | || | ||||||||   |||||||||||    
T  5257348 ataacactgcaataacaagagtgccattatcagttttaagatcaaaaagcatcgaatttgtctctttgcacggttatgaagg 5257267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 4e-58; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 177 - 339
Target Start/End: Original strand, 8877653 - 8877815
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| || ||||||| ||| |||    
T  8877653 atctttaaccactctgcttgcaaataacactgcaataaaaagagtaccattttcattagtaaggtcaaaaagcattggatatatttctttgtgcggctat 8877752  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataat 339  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  8877753 gaaggattttcgcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 8877815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 8877676 - 8877813
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||||||||||||||| || |||||| ||||||| |||||||||||||||||||| |||||||| || |||||||| || || | |||| | ||    
T  8877676 ataacactgcaataaaaagagtaccattttcattagtaaggtcaaaaagcattggatatatttctttgtgcggctatgaaggattttcgcgtgatgtgtt 8877775  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaata 151  Q
    ||||  |||||||  |||||| ||||||||||||||||    
T  8877776 tccatctatcatttggtcttggatgtcaccaacaaata 8877813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 332
Target Start/End: Complemental strand, 12599142 - 12599054
Alignment:
Q  244 aaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaac 332  Q
    |||||||||||||| || || ||||  |||||||||||||| ||||||||||| ||||| ||||| | |||||||||||||||||||||    
T  12599142 aaaagcattggatatatatccttgtgtggatatgaaggattatcacgtgatgtttttccttctctcaattggtcttggatgtcaccaac 12599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 241 - 332
Target Start/End: Original strand, 20838740 - 20838831
Alignment:
Q  241 tcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaac 332  Q
    ||||||||||||||||| || ||  | |  |||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||||||||    
T  20838740 tcaaaaagcattggatatatatcactatgtggatatgaaggattatcacatgatgtttttccttctctcatttggtcttggatgtcaccaac 20838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 20812415 - 20812476
Alignment:
Q  271 ggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaac 332  Q
    ||||| |||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  20812415 ggatacgaaggattatcacgtgatgtttttccttctctcatttggtcttggatgtcaccaac 20812476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 15803019 - 15803108
Alignment:
Q  241 tcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcacca 330  Q
    ||||||||||||||||| || ||| | |  |||||| ||||||| |||| |||||| ||||| ||||| ||| |||||||||| ||||||    
T  15803019 tcaaaaagcattggatatatatctctatgtggatataaaggattatcacatgatgtttttccttctctcattaggtcttggatatcacca 15803108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 20838718 - 20838831
Alignment:
Q  33 agtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtct 132  Q
    |||||| | |||| ||| |||||||||||||||||||||||| ||  | ||||| |||||||| || ||||||||| | |||||   | |||||  ||||    
T  20838718 agtgccctattcaatagcaagatcaaaaagcattggatatatatcactatgtggatatgaaggattatcacatgatgtttttccttctctcatttggtct 20838817  T
Q  133 tgtatgtcaccaac 146  Q
    || |||||||||||    
T  20838818 tggatgtcaccaac 20838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 30417958 - 30418021
Alignment:
Q  271 ggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||| |||||||||| |||||||||| ||||| | ||| ||  |||||||||||||||||||||    
T  30417958 ggatttgaaggatttgcacgtgatgtttttccttgtctcatacggtcttggatgtcaccaacaa 30418021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 15803016 - 15803072
Alignment:
Q  52 agatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgat 108  Q
    ||||||||||||||||||||||| ||| | ||||| ||| |||| || |||||||||    
T  15803016 agatcaaaaagcattggatatatatctctatgtggatataaaggattatcacatgat 15803072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 4344690 - 4344849
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| | ||||||| |||||||| |||| || |||||||||||||||||| ||||||||| |||||||||  || |||||||  ||||||    
T  4344690 atctttaaccactctgattgcaaataacactgctataacaaaagtacccttttcagtagtaaggtcaaaacgcattggatttatttctttgtgtggatat 4344789  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaat 336  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  4344790 gaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaacaaat 4344849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 177 - 345
Target Start/End: Complemental strand, 4123976 - 4123808
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| | ||||||| || ||||| |||| || ||| |||||||| ||||| |||||||||||||||||||  || ||| |||  ||||||    
T  4123976 atctttaaccactctgattgcaaataatactgctataacaaaagtgcccttttcggtagtaaggtcaaaaagcattggatttatttctctgtgtggatat 4123877  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctccca 345  Q
    |||||||| || |||||||||||||| ||| | |||| ||||||||||| |||||||||||||||||||    
T  4123876 gaaggattctctcgtgatgtgtttccttctatcatttcgtcttggatgttaccaacaaataatctccca 4123808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 4361121 - 4361280
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| | ||||||| |||||||  |||| || ||||||||||||| | || || |||||| |||||||||  || |||||||  ||||||    
T  4361121 atctttaaccactctgattgcaaataacactggtataacaaaagtacccttttcaattgtaagatcaaaacgcattggatttatttctttgtgtggatat 4361220  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaat 336  Q
    |||||||| ||||||||||||||||| ||| | |||| ||||||||||||||||||||||    
T  4361221 gaaggattctcacgtgatgtgtttccttctatcatttcgtcttggatgtcaccaacaaat 4361280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 177 - 331
Target Start/End: Complemental strand, 4320656 - 4320502
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||| | | ||||||| || ||||  |||| || ||| ||||||||| |||| |||||||||||||||||||  || ||| |||  ||||||    
T  4320656 atctttaaccaccctgattgcaaataatactggtataacaaaagttcccttttcattagtaaggtcaaaaagcattggatttatttctctgtgtggatat 4320557  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaa 331  Q
    |||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||    
T  4320556 gaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaa 4320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 177 - 339
Target Start/End: Original strand, 4335389 - 4335551
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||||||||   | ||| | |||||||  |||| || ||| |||||||||||||| | ||||||||||||||| || ||||||||||  || |||    
T  4335389 atctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtat 4335488  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataat 339  Q
    |||||||| || |||||||||||||| ||| |||||||||||||||||  |||||||||||||    
T  4335489 gaaggattctcccgtgatgtgtttccttctataatttggtcttggatggtaccaacaaataat 4335551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 6498535 - 6498401
Alignment:
Q  205 actgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccat 304  Q
    ||||| |||| || ||| ||||||||| |||| || |||||||||||||||||||| |||||    |||| | ||||||||||||||||||| ||||| |    
T  6498535 actgctataacaaaagttcccttttcaatagtaagatcaaaaagcattggatacatttctttaggtggatttaaaggattttcacgtgatgtatttcctt 6498436  T
Q  305 ctctaatttggtcttggatgtcaccaacaaataat 339  Q
    |||| ||| ||||||||||||||||| ||||||||    
T  6498435 ctctcattcggtcttggatgtcaccatcaaataat 6498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 4344713 - 4344857
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| ||||| |||| || ||| || |||||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||| ||||||| |||| | ||    
T  4344713 ataacactgctataacaaaagtacccttttcagtagtaaggtcaaaacgcattggatttatttctttgtgtggatatgaaggattctcacgtgatgtgtt 4344812  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctc 158  Q
    |||   |||||||  |||||| ||||||||||||||| |||||||    
T  4344813 tccttctatcatttggtcttggatgtcaccaacaaatggtctctc 4344857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 4123953 - 4123811
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||||||||| |||| || |||||| ||||| |||||||| |||||||||||||||| ||| ||| ||||||| |||||||| ||||| | |||| | ||    
T  4123953 ataatactgctataacaaaagtgcccttttcggtagtaaggtcaaaaagcattggatttatttctctgtgtggatatgaaggattctctcgtgatgtgtt 4123854  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaatagtctc 156  Q
    |||   |||||||  |||||| |||| ||||||||||| ||||    
T  4123853 tccttctatcatttcgtcttggatgttaccaacaaataatctc 4123811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 4361170 - 4361288
Alignment:
Q  40 ttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgt 139  Q
    |||||| | |||||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||| |||| | |||||   |||||||  |||||| ||||    
T  4361170 ttttcaattgtaagatcaaaacgcattggatttatttctttgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttcgtcttggatgt 4361269  T
Q  140 caccaacaaatagtctctc 158  Q
    ||||||||||| |||||||    
T  4361270 caccaacaaatggtctctc 4361288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 223 - 339
Target Start/End: Original strand, 6675793 - 6675909
Alignment:
Q  223 cccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttgga 322  Q
    ||||||||| |||| || ||||| |||||||||| ||||||||| |  || | |||||||||||||| |||||| ||||| ||||| |||  ||||||||    
T  6675793 cccttttcaatagtaagatcaaagagcattggattcatctctttatgtggctttgaaggattttcacttgatgtatttccttctctcattaagtcttgga 6675892  T
Q  323 tgtcaccaacaaataat 339  Q
    |||||||| ||||||||    
T  6675893 tgtcaccatcaaataat 6675909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 4335410 - 4335499
Alignment:
Q  12 agataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctc 101  Q
    |||||| ||||  |||| || |||||| |||||||||||||  |||||||||||||| ||||||||||||||||| |||||||| |||||    
T  4335410 agataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctc 4335499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 4320633 - 4320502
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||||||||  |||| || ||| || |||||| ||||||| |||||||||||||||| ||| ||| ||||||| |||||||| ||||||| |||| | ||    
T  4320633 ataatactggtataacaaaagttcccttttcattagtaaggtcaaaaagcattggatttatttctctgtgtggatatgaaggattctcacgtgatgtgtt 4320534  T
Q  114 tccacttatcattcagtcttgtatgtcaccaa 145  Q
    |||   |||||||  |||||| ||||||||||    
T  4320533 tccttctatcatttggtcttggatgtcaccaa 4320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 339
Target Start/End: Complemental strand, 6588166 - 6588071
Alignment:
Q  244 aaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataat 339  Q
    |||||||||||||| || ||||| |  || | ||||||||||||||||||||| || || ||||| ||| ||||||||||||| ||| ||||||||    
T  6588166 aaaagcattggatatatttctttttgtggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggatgtcgccatcaaataat 6588071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 6675796 - 6675907
Alignment:
Q  40 ttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgt 139  Q
    |||||| ||||||||||||| ||||||||||  |||||||| ||||| | |||||| || |||| |||| |||||||   | ||||| ||||||| ||||    
T  6675796 ttttcaatagtaagatcaaagagcattggattcatctctttatgtggctttgaaggattttcacttgatgtatttccttctctcattaagtcttggatgt 6675895  T
Q  140 caccaacaaata 151  Q
    ||||| ||||||    
T  6675896 caccatcaaata 6675907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 448 - 538
Target Start/End: Original strand, 4361422 - 4361512
Alignment:
Q  448 gaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatcac 538  Q
    |||||||||||||  || ||  ||||||| |||||| |||| |||| ||| |||||||| ||||| |||||| ||||||||||||||||||    
T  4361422 gaacttcaactttcacaggacacagcaataattttgaatgctttaagtgcaacaaattccaaggaattggaatcaactgcaactacatcac 4361512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 6498541 - 6498403
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 112  Q
    ||||| ||||| |||| || ||| || |||||| ||||||||||||||||||||||||| || |||||  |||| | | |||| || |||| |||| |||    
T  6498541 gataagactgctataacaaaagttcccttttcaatagtaagatcaaaaagcattggatacatttctttaggtggatttaaaggattttcacgtgatgtat 6498442  T
Q  113 ttccacttatcattcagtcttgtatgtcaccaacaaata 151  Q
    ||||   | |||||| |||||| ||||||||| ||||||    
T  6498441 ttccttctctcattcggtcttggatgtcaccatcaaata 6498403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 6545457 - 6545323
Alignment:
Q  205 actgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccat 304  Q
    ||||| |||| || ||| ||||||||| |||| || |  |||||||||||||| || |||||    || | ||||||||||||||||||||| || || |    
T  6545457 actgctataacaaaagtgcccttttcaatagttagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtattccctt 6545358  T
Q  305 ctctaatttggtcttggatgtcaccaacaaataat 339  Q
    |||| ||| |||||||| |||||||| ||||||||    
T  6545357 ctctcattcggtcttggctgtcaccatcaaataat 6545323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 330
Target Start/End: Complemental strand, 6621516 - 6621391
Alignment:
Q  205 actgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccat 304  Q
    ||||| |||| || ||| ||||||||| ||||  | || |||| ||||||||| || ||||| |  |||| ||||||||||||||| ||||||||||| |    
T  6621516 actgctataacaaaagttcccttttcaatagtacgatctaaaaacattggatatatttctttatgtggatttgaaggattttcacgggatgtgtttcctt 6621417  T
Q  305 ctctaatttggtcttggatgtcacca 330  Q
    | || ||| | |||||||||||||||    
T  6621416 cacttattcgctcttggatgtcacca 6621391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 6651133 - 6651264
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 112  Q
    ||||| ||||| |||| || ||||||||||||| ||||||||| || || |||||||||||| ||| | ||||| | |||||| || ||||  ||| |||    
T  6651133 gataagactgctataacaaaagtgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtat 6651232  T
Q  113 ttccacttatcattcagtcttgtatgtcacca 144  Q
    ||||  || || ||| |||||| |||||||||    
T  6651233 ttccttttctcgttcggtcttggatgtcacca 6651264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 6728549 - 6728612
Alignment:
Q  276 tgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataat 339  Q
    ||||||||||||||||||||| || || |||||  |||||||||||||||| ||| ||||||||    
T  6728549 tgaaggattttcacgtgatgtattcccttctcttgtttggtcttggatgtcgccatcaaataat 6728612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 6815536 - 6815603
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctcttt 80  Q
    ||||| ||||| ||||||| |||||| |||||||| |||||||  ||||||||||||||||| |||||    
T  6815536 gataagactgctataaaaaaagtgccattttcagtggtaagattgaaaagcattggatatatttcttt 6815603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 6758818 - 6758928
Alignment:
Q  41 tttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgtc 140  Q
    ||||| || |||||| |||||||||| ||| ||| ||| ||||||| | |||||| ||  ||| ||||||||||||  || |||||| |||| | |||||    
T  6758818 tttcaatattaagattaaaaagcattagatttatttctctgtgtggctttgaaggatttgcacgtgatatatttccttttgtcattcggtctaggatgtc 6758917  T
Q  141 accaacaaata 151  Q
    |||||||||||    
T  6758918 accaacaaata 6758928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 6822802 - 6822896
Alignment:
Q  244 aaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataa 338  Q
    |||||||||||||| || ||||| | ||| | ||||||||||||||||||||| || || ||||| ||| | |||||||| || ||| |||||||    
T  6822802 aaaagcattggatatatttctttatgcggctttgaaggattttcacgtgatgtattcccttctctcattcgctcttggatatcgccatcaaataa 6822896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 338
Target Start/End: Original strand, 6753032 - 6753165
Alignment:
Q  205 actgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccat 304  Q
    ||||| |||| || ||| ||||||||| |||| || |  |||||||||||||| || |||||    || | ||||||||||||||||||||| || || |    
T  6753032 actgctataacaaaagtgcccttttcaatagtaagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtattccctt 6753131  T
Q  305 ctctaatttggtcttggatgtcaccaacaaataa 338  Q
    |||| ||| |||||||||| || ||| |||||||    
T  6753132 ctctcattcggtcttggatatcgccatcaaataa 6753165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 7885389 - 7885324
Alignment:
Q  30 aagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagg 95  Q
    ||||||||| ||| |||||||||||||||||||||||| || ||| ||| | ||||||||| ||||    
T  7885389 aagagtgccctttgcagtagtaagatcaaaaagcattgcatttatttctctatgtggttataaagg 7885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 536
Target Start/End: Original strand, 4344991 - 4345079
Alignment:
Q  448 gaacttcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaactacatc 536  Q
    ||||||||||| |  || |||||| |||  |||||| ||||||||| ||| |||| ||||| ||| |||||| ||||||||||||||||    
T  4344991 gaacttcaactatcacaagatgcaacaagtattttgcatgccttaagtgcaacaagttctacggaattggaatcaactgcaactacatc 4345079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 6753026 - 6753126
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 112  Q
    ||||| ||||| |||| || |||||| |||||| |||||||||  ||||||||||||||||| |||||  |||| | |||||| || |||| |||| |||    
T  6753026 gataagactgctataacaaaagtgcccttttcaatagtaagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtat 6753125  T
Q  113 t 113  Q
    |    
T  6753126 t 6753126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 6545463 - 6545325
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 112  Q
    ||||| ||||| |||| || |||||| |||||| |||| ||||  ||||||||||||||||| |||||  |||| | |||||| || |||| |||| |||    
T  6545463 gataagactgctataacaaaagtgcccttttcaatagttagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtat 6545364  T
Q  113 ttccacttatcattcagtcttgtatgtcaccaacaaata 151  Q
    | ||   | |||||| ||||||  |||||||| ||||||    
T  6545363 tcccttctctcattcggtcttggctgtcaccatcaaata 6545325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 339
Target Start/End: Original strand, 6815542 - 6815676
Alignment:
Q  205 actgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccat 304  Q
    ||||| ||||||| ||| || |||||||| || || |  |||||||||||||| || |||||    || | |||||||||| |||||||||| ||| | |    
T  6815542 actgctataaaaaaagtgccattttcagtggtaagattgaaaagcattggatatatttctttaggtggctttgaaggatttacacgtgatgtattttctt 6815641  T
Q  305 ctctaatttggtcttggatgtcaccaacaaataat 339  Q
    ||||  || | ||||||||||||||| ||||||||    
T  6815642 ctctcgttcgctcttggatgtcaccatcaaataat 6815676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 6822771 - 6822857
Alignment:
Q  27 aaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    ||||| |||||| |||||| |||||||||  ||||||||||||||||| ||||| || || | |||||| || |||| |||| ||||    
T  6822771 aaaaaaagtgccattttcaatagtaagattgaaaagcattggatatatttctttatgcggctttgaaggattttcacgtgatgtatt 6822857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 4133440 - 4133379
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatat 74  Q
    ||||| |||||||||| || |||||| |||||||| | ||| ||||||||||||| ||||||    
T  4133440 gataacactgcaataacaaaagtgcccttttcagtcgcaaggtcaaaaagcattgaatatat 4133379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 335
Target Start/End: Complemental strand, 6532223 - 6532111
Alignment:
Q  223 cccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttgga 322  Q
    ||||||||| |||| ||  |||||| ||||| ||| || ||| | | ||| | |||||||||||||  |||||| ||||| ||| | ||| |||||||||    
T  6532223 cccttttcaatagtaagaccaaaaaacattgaatatatttctatttgcggctttgaaggattttcaaatgatgtatttccttctatcattcggtcttgga 6532124  T
Q  323 tgtcaccaacaaa 335  Q
    |||||||| ||||    
T  6532123 tgtcaccatcaaa 6532111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 6728472 - 6728572
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 112  Q
    ||||| ||||| |||| || |||||| |||||| |||||||||  ||||| ||||||||||| |||||  |||| | |||||| || |||| |||| |||    
T  6728472 gataagactgctataacaaaagtgccattttcaatagtaagattgaaaagtattggatatatttcttttcgtggctttgaaggattttcacgtgatgtat 6728571  T
Q  113 t 113  Q
    |    
T  6728572 t 6728572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 88; Significance: 5e-42; HSPs: 3)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 177 - 348
Target Start/End: Complemental strand, 8937 - 8766
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| ||||||| | ||||||||| ||| |||||| ||||||||| |||| ||||||||||| |||| ||| || ||||||| |||  ||    
T  8937 atctttaaccactctgcttgcagataacactgcattaacaagagtgcccttttcaatagtaaggtcaaaaagtattgtatatatttctttgtgcggccat 8838  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatct 348  Q
    |||||||| ||||||||||||||||||||| | |||  |||||||||||| |||||||||||||||||||||    
T  8837 gaaggattctcacgtgatgtgtttccatctatcattaagtcttggatgtctccaacaaataatctcccatct 8766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 446
Target Start/End: Complemental strand, 8740 - 8638
Alignment:
Q  344 catctcttgttcctttaaatgtaccacatagtagttctcgcgaactatcatcgatttcccagtgtctttcaagtcttcgaagtatgtggctgaagtgtag 443  Q
    |||||| |||||||||| ||||||||| ||||||||| |  ||||||||||| |||||| |||  ||| ||||| |||||||| | ||| ||||||||||    
T  8740 catctcatgttcctttagatgtaccacgtagtagttcccaggaactatcatcaatttccaagtaccttccaagtattcgaagtctttgggtgaagtgtag 8641  T
Q  444 ctc 446  Q
    |||    
T  8640 ctc 8638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 472 - 531
Target Start/End: Complemental strand, 8631 - 8572
Alignment:
Q  472 gcaatgattttggatgccttaaatgccacaaattctaaggagttggaaccaactgcaact 531  Q
    ||||| ||||||||||||||| ||||| |||||||||| || |||||||||||| |||||    
T  8631 gcaattattttggatgccttatatgccgcaaattctaaagaattggaaccaactacaact 8572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 177 - 336
Target Start/End: Complemental strand, 36213866 - 36213707
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    ||||||||||||   | ||||||| ||||||||||||| |||||| || ||||||||||| || || |||||||| |  || || ||||||| ||| |||    
T  36213866 atctttaaccaccttgattgcaaataacactgcaataacaagagtgccattttcagtagtaagatctaaaagcatcgcttatatatctttgtgcggctat 36213767  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaat 336  Q
    |||||||| |||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  36213766 gaaggattctcacatgatgtgtttccatctatcatttggtcttggatgtcaccaacaaat 36213707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 36213843 - 36213707
Alignment:
Q  14 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 113  Q
    |||| |||||||||| ||||||||| ||||||||||||||||| |||||||| |  ||||| |||||||| || |||||||| |||||||||||| | ||    
T  36213843 ataacactgcaataacaagagtgccattttcagtagtaagatctaaaagcatcgcttatatatctttgtgcggctatgaaggattctcacatgatgtgtt 36213744  T
Q  114 tccacttatcattcagtcttgtatgtcaccaacaaat 150  Q
    ||||  |||||||  |||||| |||||||||||||||    
T  36213743 tccatctatcatttggtcttggatgtcaccaacaaat 36213707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 453 - 520
Target Start/End: Complemental strand, 36213560 - 36213493
Alignment:
Q  453 tcaactttgtcatgatgcagcaatgattttggatgccttaaatgccacaaattctaaggagttggaac 520  Q
    |||||||| ||||||||||| ||| ||||||||||||||| ||||||| |||| |||||| |||||||    
T  36213560 tcaactttctcatgatgcagaaataattttggatgccttatatgccactaattataaggaattggaac 36213493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 18935452 - 18935534
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagg 95  Q
    ||||| |||||  ||| ||||||||| ||| ||||||||||||||||||||||||||| ||| ||  ||||||| | ||||||    
T  18935452 gataagactgctgtaacaagagtgccctttgcagtagtaagatcaaaaagcattggatttatttcactgtgtggatttgaagg 18935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 18935469 - 18935589
Alignment:
Q  216 aagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttgg 315  Q
    |||||| |||||| ||||||| || ||||||||||||||||  || ||  |||  |||| |||||||||  ||||| |||||||||| ||  | |||  |    
T  18935469 aagagtgccctttgcagtagtaagatcaaaaagcattggatttatttcactgtgtggatttgaaggattagcacgtaatgtgtttccttcaattattcag 18935568  T
Q  316 tcttggatgtcaccaacaaat 336  Q
    ||||||||||| |||||||||    
T  18935569 tcttggatgtctccaacaaat 18935589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 47986812 - 47986739
Alignment:
Q  274 tatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  47986812 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatc 47986739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 47996099 - 47996026
Alignment:
Q  274 tatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  47996099 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatc 47996026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 48005386 - 48005313
Alignment:
Q  274 tatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  48005386 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatc 48005313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 48014671 - 48014598
Alignment:
Q  274 tatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaaataatctcccatc 347  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  48014671 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatc 48014598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 6905870 - 6905806
Alignment:
Q  270 cggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    ||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||||    
T  6905870 cggatatgaaggattatcacgtgatatttttccttctctcatttggtcttggatgtcaccaacaa 6905806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 32411146 - 32411083
Alignment:
Q  271 ggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||||||||||||| |||| ||| || ||||| ||||| |||||||||| ||||||||||||||    
T  32411146 ggatatgaaggattatcacatgaagtatttccctctctcatttggtcttagatgtcaccaacaa 32411083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 3391637 - 3391536
Alignment:
Q  233 tagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaac 332  Q
    ||||||| ||||||||||||||||| || ||| | |  |||||||||||||| |||| | |||| ||||| ||||| ||| |||||||||||||||||||    
T  3391637 tagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggatgtcaccaac 3391538  T
Q  333 aa 334  Q
    ||    
T  3391537 aa 3391536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 332
Target Start/End: Complemental strand, 3262737 - 3262629
Alignment:
Q  223 cccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttgga 322  Q
    |||| |||| |||| || ||||||||||||||||| || ||  | |  |||||||| ||||||||||||||||| ||||| ||| | |||||||||||||    
T  3262737 ccctattcaatagtaagatcaaaaagcattggatatatatccctatgtggatatga-ggattttcacgtgatgtttttccctctatcatttggtcttgga 3262639  T
Q  323 tgtcaccaac 332  Q
    ||||||||||    
T  3262638 tgtcaccaac 3262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 3364269 - 3364370
Alignment:
Q  233 tagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaac 332  Q
    ||||||| ||||||||||||||||| || ||| | |  |||||||||||||| |||| | |||| ||||| ||||| ||| |||||||||| ||||||||    
T  3364269 tagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggatatcaccaac 3364368  T
Q  333 aa 334  Q
    ||    
T  3364369 aa 3364370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 3407386 - 3407323
Alignment:
Q  271 ggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||||| ||||||| ||||||||||| ||||| ||| | |||||||||||||||||||||||||    
T  3407386 ggatatcaaggattatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaacaa 3407323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 332
Target Start/End: Original strand, 31175955 - 31176046
Alignment:
Q  241 tcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaac 332  Q
    ||||||||||||| ||| || ||| | |  |||||||||||||| ||| |||| || ||||| ||||| |||||||||||||||||||||||    
T  31175955 tcaaaaagcattgcatatatatctctatgtggatatgaaggattatcatgtgacgtttttccttctctcatttggtcttggatgtcaccaac 31176046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 3286578 - 3286516
Alignment:
Q  271 ggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaaca 333  Q
    |||||||||||||| |||| |||||| |||| |||||| ||| ||||||||||||||||||||    
T  3286578 ggatatgaaggattatcacatgatgtttttcaatctctcattaggtcttggatgtcaccaaca 3286516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 3314998 - 3315056
Alignment:
Q  273 atatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaa 331  Q
    ||||||||| || ||||||||||| ||||| ||| | ||||||||||||||||||||||    
T  3314998 atatgaaggtttatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaa 3315056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 3391637 - 3391536
Alignment:
Q  47 tagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgtcaccaac 146  Q
    |||| ||||||||||||||||||||||| ||| | ||||| |||||||| || |||||| || | |||||   | |||||  |||||| |||||||||||    
T  3391637 tagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggatgtcaccaac 3391538  T
Q  147 aa 148  Q
    ||    
T  3391537 aa 3391536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 7164714 - 7164654
Alignment:
Q  272 gatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaac 332  Q
    |||||||||| || ||  ||||||| ||||| ||||| |||||||||||||||||||||||    
T  7164714 gatatgaagggttatcctgtgatgtttttccttctcttatttggtcttggatgtcaccaac 7164654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 3286630 - 3286516
Alignment:
Q  33 agtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtct 132  Q
    |||||| |||||| | |||||||||||||||||  ||||||| ||  | ||||| |||||||| || ||||||||| | |||| |  | |||||  ||||    
T  3286630 agtgcccttttcaattgtaagatcaaaaagcatcagatatatatccctatgtggatatgaaggattatcacatgatgtttttcaatctctcattaggtct 3286531  T
Q  133 tgtatgtcaccaaca 147  Q
    || ||||||||||||    
T  3286530 tggatgtcaccaaca 3286516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 3364269 - 3364327
Alignment:
Q  47 tagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacat 105  Q
    |||| ||||||||||||||||||||||| ||| | ||||| |||||||| || ||||||    
T  3364269 tagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcacat 3364327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 3262732 - 3262700
Alignment:
Q  42 ttcagtagtaagatcaaaaagcattggatatat 74  Q
    |||| ||||||||||||||||||||||||||||    
T  3262732 ttcaatagtaagatcaaaaagcattggatatat 3262700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 3325063 - 3325003
Alignment:
Q  271 ggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaa 331  Q
    |||||||||||| | ||||  ||||| ||||| ||| | ||||||||||||||||||||||    
T  3325063 ggatatgaaggactatcacacgatgtttttccttctatcatttggtcttggatgtcaccaa 3325003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 334
Target Start/End: Complemental strand, 22584251 - 22584094
Alignment:
Q  177 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 276  Q
    |||||||||||||| |||||||||  | ||||||||||||| ||| || |||||| || | ||||||||||  ||| | ||||| |||||||  || |||    
T  22584251 atctttaaccactctgcttgcaaatgaaactgcaataaaaaaagtgccattttcaatatttaggtcaaaaactatttggtacatttctttgtgtggctat 22584152  T
Q  277 gaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    |||||| | | | | |||||  |||||||| | |||||||||||||||||| ||||||    
T  22584151 gaaggactcttaagcgatgtagttccatctatgatttggtcttggatgtcatcaacaa 22584094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 14767045 - 14766978
Alignment:
Q  50 taagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttcca 117  Q
    |||||| |||||||||||||||||| ||  | |||||||||||||| || || |||||||| ||||||    
T  14767045 taagattaaaaagcattggatatatatccctatgtggttatgaaggattatcgcatgatatttttcca 14766978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 6210 - 6146
Alignment:
Q  270 cggatatgaaggattttcacgtgatgtgtttccatctctaatttggtcttggatgtcaccaacaa 334  Q
    ||||||||||||||| ||||||||||| ||||| || || |||||||||||||||||||||||||    
T  6210 cggatatgaaggattatcacgtgatgtttttccttcccttatttggtcttggatgtcaccaacaa 6146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 330
Target Start/End: Original strand, 6731 - 6856
Alignment:
Q  205 actgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattttcacgtgatgtgtttccat 304  Q
    ||||| |||| || ||| ||||||||| ||||  | || |||| ||||||||| || ||||| |  |||| ||||||||||||||| ||||||||||| |    
T  6731 actgctataacaaaagttcccttttcaatagtacgatctaaaaacattggatatatttctttatgtggatttgaaggattttcacgggatgtgtttcctt 6830  T
Q  305 ctctaatttggtcttggatgtcacca 330  Q
    | || ||| | |||||||||||||||    
T  6831 cacttattcgctcttggatgtcacca 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0813 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 4841 - 4710
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 112  Q
    ||||| ||||| |||| || ||||||||||||| ||||||||| || || |||||||||||| ||| | ||||| | |||||| || ||||  ||| |||    
T  4841 gataagactgctataacaaaagtgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtat 4742  T
Q  113 ttccacttatcattcagtcttgtatgtcacca 144  Q
    ||||  || || ||| |||||| |||||||||    
T  4741 ttccttttctcgttcggtcttggatgtcacca 4710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 8300 - 8233
Alignment:
Q  13 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctcttt 80  Q
    ||||| ||||| ||||||| |||||| |||||||| |||||||  |||| |||||||||||| |||||    
T  8300 gataagactgctataaaaaaagtgccattttcagtggtaagattgaaaaccattggatatatttcttt 8233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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