View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19403_high_31 (Length: 254)
Name: NF19403_high_31
Description: NF19403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19403_high_31 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 36657673 - 36657904
Alignment:
| Q |
1 |
tcaagaaaatgtttgtgaagcactttatatggtcgaaactttaagtctcttatagttggttgtactaccctctaatgatagattcattagtaagaaatga |
100 |
Q |
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| T |
36657673 |
tcaagaaaatgtttgtgaagcactttatatggtcgaaactttaagtctcttatagttggttgtactaccctctaatgatagattcattagtaagaaatga |
36657772 |
T |
|
| Q |
101 |
gtagacaaatttttatatctaggatgagacaatgtcgaatgaaatgatgacattgttttgacaagtttcatgttttaaaaatggaattgttaacattaaa |
200 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36657773 |
gtggacaaatttttatatctaggatgagacaatgtcgaatgaaatgatgacattgttttgacaagtttcatgttttaaaaatggaattgttaacattaaa |
36657872 |
T |
|
| Q |
201 |
cttctctgtggttgagtttgattattccagac |
232 |
Q |
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||||||||||||||||||||||||| |||||| |
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| T |
36657873 |
cttctctgtggttgagtttgattatcccagac |
36657904 |
T |
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