View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19403_low_42 (Length: 236)
Name: NF19403_low_42
Description: NF19403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19403_low_42 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 1588652 - 1588854
Alignment:
| Q |
13 |
cactttttattaaataagaaagaatccaataaggaattgaaatgaataaatcaataatgcaatttcgcttaacggagaagaataattcaatcaatcaaaa |
112 |
Q |
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| T |
1588652 |
cactttttattaaataaaaaagaatcaaataaggaattgaaatgaataaatcaataatgcaatttcgcttaacggagaagaataattcaatcaatcaaaa |
1588751 |
T |
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| Q |
113 |
tgaagaagatttttcgttttgacttgaaaaatattcaaatannnnnnnnatatgaaatccatttcctagaaacatgacaaaattttgccgtttcgtgaac |
212 |
Q |
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| T |
1588752 |
tgaagaagatttttcgttttgacttgaaaaatattcaaatattttttttatatggaatccatttcctagaaacatgacaaaattttgccgtttcgtgaac |
1588851 |
T |
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| Q |
213 |
gta |
215 |
Q |
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||| |
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| T |
1588852 |
gta |
1588854 |
T |
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