View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19403_low_9 (Length: 577)
Name: NF19403_low_9
Description: NF19403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19403_low_9 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 512; Significance: 0; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 11 - 564
Target Start/End: Complemental strand, 47569263 - 47568713
Alignment:
| Q |
11 |
cataggttagattttgatatgtggtataattaggctcgatgttgttaacgtgaatcatttcagaatataaatcataggcttggtttacaagtctatcttt |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47569263 |
cataggttagattttgatatgtggtataattaggctcgatgttgttaacgtgaatcatttcagaatataaatcataggcttggtttacaagtctatcttt |
47569164 |
T |
 |
| Q |
111 |
gcagagtctgaatatgatggagttataacagcacttgagagtatcagtaaaatcacagtcatcttttggttccttgtcaatcagtggtgcctgtctcaac |
210 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
47569163 |
gcagagtctgaatatg---gagttataacagcacttgagagtatcagtaacatcacagtcatcttttggttccttgtcaatcagtagtgcctgtctcaac |
47569067 |
T |
 |
| Q |
211 |
atattgatggctaattgagtttctcctatctcacataatccattgatcagaataagataactatcatggttcaacagaaaaccgtttttaagtatgatgt |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47569066 |
atattgatggctaattgagtttctcctatctcacataatccattgatcagaataagataactatcatggttcaacagaaaaccgtttttaagtatgatgt |
47568967 |
T |
 |
| Q |
311 |
cattgtaaaacagcattgctttgtcagtctgtcgtctgccacaaaaaccatctaaaagatgattcaaagtttgtgtagtaggattatcactggtgtcgat |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
47568966 |
cattgtaaaacagcattgctttgtcagtctgtcgtctgcgacaaaaaccaactaaaagatgattcaaagtttgtgtagtaggattatcaccggtgtcgat |
47568867 |
T |
 |
| Q |
411 |
gattttatggaataaagagatagctgaagacattttaccttgtctagagtgacactggatgaggatagcccaaatatgactgtctggtttatgatgatcg |
510 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
47568866 |
gattttatggaataaagagatatctgaagacattttaccttgtctagagtgacactggatgaggatagcccaagtatgactgtctggtttatgatgatcg |
47568767 |
T |
 |
| Q |
511 |
ttgaattcggatgattcttccaattgtttgaaagggaaagaacagtggtgaatg |
564 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47568766 |
ttgaattcggatgattcttccaattgtttgaaagggaaagaacagtggtgaatg |
47568713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 83 - 477
Target Start/End: Complemental strand, 23787072 - 23786687
Alignment:
| Q |
83 |
cataggcttggtttacaagtctatctttgcagagtctgaatatgatggagttataacagcacttgagagtatcagtaaaatcacagtcatcttttggttc |
182 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| ||||||||||| ||||||||||| || |||||| || |||| ||||| |||||| |
|
|
| T |
23787072 |
cataggcttggtttacaagtctttctttggagagcctgaatatgattgagttataacaagacgtgagag---------aaacacaagtatcttctggttc |
23786982 |
T |
 |
| Q |
183 |
cttgtcaatcagtggtgcctgtctcaacatattgatggctaattgagtttctcctatctcacataatccattgatcagaataagataactatcatggttc |
282 |
Q |
| |
|
| | |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||| | |
|
|
| T |
23786981 |
cctttcaatcagcagtgcctgtctcaacatgttgatggctaattgagtttctcctatctcacataatccatcgacaagaatattataactacgatggtcc |
23786882 |
T |
 |
| Q |
283 |
aacagaaaaccgtttttaagtatgatgtcattgtaaaacagcattgctttgtcagtctgtcgtctgccacaaaaaccatctaaaagatgattcaaagttt |
382 |
Q |
| |
|
|| || |||| |||||||||||||||||||| |||||| ||||||||||||| |||| | ||| ||||||||| ||||| ||| ||| ||||||| |
|
|
| T |
23786881 |
aaaggataaccctttttaagtatgatgtcattataaaacggcattgctttgtctatctgacttctaagacaaaaaccttctaagagagcatttaaagttt |
23786782 |
T |
 |
| Q |
383 |
gtgtagtaggattatcactggtgtcgatgattttatggaataaagagatagctgaagacattttaccttgtctagagtgacactggatgaggata |
477 |
Q |
| |
|
| |||||||| || || || |||||||||||||| ||||||| ||| |||||||||||| |||||| | |||||||||||||||||||||| |
|
|
| T |
23786781 |
cagcagtaggataatgaccggagtcgatgattttattgaataaatagagagctgaagacatgttacctcttagagagtgacactggatgaggata |
23786687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 42 - 440
Target Start/End: Complemental strand, 28231569 - 28231180
Alignment:
| Q |
42 |
aggctcgatgttgttaacgtgaatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgatggagttataacag |
141 |
Q |
| |
|
||||| |||||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || || |||||||| |
|
|
| T |
28231569 |
aggcttgatgttgttaacataaatcatttcagaatataattcataggcttggttaacaagtctatctttgcagagtctgaatataattgaattataacac |
28231470 |
T |
 |
| Q |
142 |
cacttgagagtatcagtaaaatcacagtcatcttttggttccttgtcaatcagtggtgcctgtctcaacatattgatggctaattgagtttctcctatct |
241 |
Q |
| |
|
||| ||| | || |||| | || |||||||| |||||||||| | |||||| |||||||| | ||| ||| ||||||||||||||||| |
|
|
| T |
28231469 |
cacatgaaatta-----gaaat----gcgatattttggtttcttgtcaatctctagtgcctttctcaacaactggattgctgtttgagtttctcctatct |
28231379 |
T |
 |
| Q |
242 |
cacataatccattgatcagaataagataactatcatggttcaacagaaaaccgtttttaagtatgatgtcattgtaaaacagcattgctttgtcagtctg |
341 |
Q |
| |
|
|||||||||||||| | |||||| |||||| |||| ||||||| ||||||| |||||||||||||| |||||||||| |||| ||| || | | ||| |
|
|
| T |
28231378 |
cacataatccattgcttagaatataataactttcatcgttcaactgaaaaccctttttaagtatgataccattgtaaaagagcaatgcattatgaatctc |
28231279 |
T |
 |
| Q |
342 |
tcgtctgccacaaaaaccatctaaaagatgattcaaagtttgtgtagtaggattatcactggtgtcgatgattttatggaataaagagatagctgaaga |
440 |
Q |
| |
|
|| || ||| |||||| || ||||||||||||| ||||||||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
28231278 |
atgtttgtcacgaaaacctcgtagaagatgattcaaattttgtgtagtaggatgataaccggtgtcgatgattttattgaatagagagaaagctgaaga |
28231180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 229 - 483
Target Start/End: Complemental strand, 28238973 - 28238719
Alignment:
| Q |
229 |
gtttctcctatctcacataatccattgatcagaataagataactatcatggttcaacagaaaaccgtttttaagtatgatgtcattgtaaaacagcattg |
328 |
Q |
| |
|
||||||||||||| ||||||||| ||||| |||| |||||||| | ||||| |||| ||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
28238973 |
gtttctcctatcttacataatcctttgattagaacaagataacacttatggtccaactgaaaaccctttttaagtatgatgtaattgtaaaagtgcattg |
28238874 |
T |
 |
| Q |
329 |
ctttgtcagtctgtcgtctgccacaaaaaccatctaaaagatgattcaaagtttgtgtagtaggattatcactggtgtcgatgattttatggaataaaga |
428 |
Q |
| |
|
| |||| | |||| |||| |||||||||||| ||||||| || |||||| | |||||||| || || |||||||||||| |||||||| | ||| |
|
|
| T |
28238873 |
ccttgtgaatctgatgtctatcacaaaaaccatataaaagagaatacaaagtaccagcagtaggatgatgaccggtgtcgatgatcttatggaaaagaga |
28238774 |
T |
 |
| Q |
429 |
gatagctgaagacattttaccttgtctagagtgacactggatgaggatagcccaa |
483 |
Q |
| |
|
||||||||||||||| ||||| | ||| ||||| | |||||||||||||||| |
|
|
| T |
28238773 |
gatagctgaagacatgttaccatcgacagaatgacatttgatgaggatagcccaa |
28238719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 51 - 451
Target Start/End: Original strand, 21159167 - 21159567
Alignment:
| Q |
51 |
gttgttaacgtgaatcatttcagaatataaatcataggcttggtttacaagtctatctttgcag---agtctgaatatgatggagttataacagcacttg |
147 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| | ||||||||| || || |
|
|
| T |
21159167 |
gttgttaacatgaagaatttcagaatataaatcataggcttggtttataagtctatctttgcaggctagcctgaatatgactgtattataacagaacgtg |
21159266 |
T |
 |
| Q |
148 |
agagtatcagtaaaatcacagtcatcttttggttccttgtcaatcagtggtgcctgtctcaacatattgatggctaattgagtttctcctatctcacata |
247 |
Q |
| |
|
| |||||||| || | ||| || || | |||||| || |||| |||||||| | ||||||| ||||||||||||||||| ||||| |
|
|
| T |
21159267 |
a------cagtaaaaccataaccattttccctgtcaatctcaatctgtaaagcctttctcaacaactggatggctgattgagtttctcctatccgacata |
21159360 |
T |
 |
| Q |
248 |
atccattgatcagaataagataactatcatggttcaacagaaa---accgtttttaagtatgatgtcattgtaaaacagcattgctttgtcagtctgtcg |
344 |
Q |
| |
|
||||| |||| ||||||| ||||||||||||||||||| ||| ||| ||| | | |||||||||||||||||| ||||||| ||||| ||| | | |
|
|
| T |
21159361 |
atccagtgattagaataatataactatcatggttcaactaaaaaccaccatttattattatgatgtcattgtaaaagagcattgatttgtgagtttcacc |
21159460 |
T |
 |
| Q |
345 |
tctgccacaaaaaccatctaaaagatgattcaaagtttgtgtagtaggattatcactggtgtcgatgattttatggaataaagagatagctgaagacatt |
444 |
Q |
| |
|
| ||| |||||||||||| | |||| |||||||||||| ||| |||||| || || ||||| |||||| ||| ||||| |||||| || |||||||| |
|
|
| T |
21159461 |
tttgcgacaaaaaccatcgagaagaagattcaaagtttcagtactaggatgattaccggtgttgatgatattacagaatagagagatggcagaagacatg |
21159560 |
T |
 |
| Q |
445 |
ttacctt |
451 |
Q |
| |
|
||||||| |
|
|
| T |
21159561 |
ttacctt |
21159567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 6326784 - 6326860
Alignment:
| Q |
61 |
tgaatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgatggagttata |
137 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
6326784 |
tgaatcatttcagaatataaatcataggcttggtttgcaagtctatctttgcagagtctgagtatgatcgagttata |
6326860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 28239136 - 28239056
Alignment:
| Q |
48 |
gatgttgttaacgtgaatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgat |
128 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
28239136 |
gatgttgttaacatgaatcatttcagaatacaaatcataggcttggtttacaagtctatctttgcagagcctgtatatgat |
28239056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 14508844 - 14508909
Alignment:
| Q |
63 |
aatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgat |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
14508844 |
aatcatttcagaatataaatcataggcttggtttacacgtctatctttgcatagtctgaatatgat |
14508909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 677272 - 677203
Alignment:
| Q |
56 |
taacgtgaatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatat |
125 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| |
|
|
| T |
677272 |
taacatgaatcatttcagaatataaatcataggcttgatgtacaagtctatctttgcagagtctaaatat |
677203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 671025 - 671090
Alignment:
| Q |
63 |
aatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgat |
128 |
Q |
| |
|
|||||||||| |||||||| ||||| ||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
671025 |
aatcatttcaaaatataaaccatagccttggtttacaagtctatctttgcacagcctgaatatgat |
671090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 2289012 - 2289089
Alignment:
| Q |
48 |
gatgttgttaacgtgaatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgat |
128 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||| ||| |||| |||||| |
|
|
| T |
2289012 |
gatgttgttaac---aatcattttagaatataaatcataggcttggattacaagtctatccttgccgagcctgagtatgat |
2289089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 28326365 - 28326285
Alignment:
| Q |
65 |
tcatttcagaatataaatcataggcttggtttacaagtctatctttgca---gagtctgaatatgatggagttataacagc |
142 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||| | ||||||||||| |
|
|
| T |
28326365 |
tcatttcagaatataaatcataagcttggtttataagtctatctttgcaagctagcctgaatatgattgtgttataacagc |
28326285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 24621795 - 24621852
Alignment:
| Q |
83 |
cataggcttggtttacaagtctatctttgcagagtctgaatatgatggagttataaca |
140 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
24621795 |
cataggcttggtttacaagtctttctttggagagcctgaatatgattgagttataaca |
24621852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 28326234 - 28326159
Alignment:
| Q |
199 |
gcctgtctcaacatattgatggctaattgagtttctcctatctcacataatccattgatcagaataagataactat |
274 |
Q |
| |
|
|||| |||||||| | ||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
28326234 |
gcctttctcaacaactggatggctgattgagtttctcctatccgacataatccagtgattagaataagataactat |
28326159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 4251618 - 4251662
Alignment:
| Q |
84 |
ataggcttggtttacaagtctatctttgcagagtctgaatatgat |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
4251618 |
ataggcttggtttacaagtctatctttgcagagcctggatatgat |
4251662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 334
Target Start/End: Original strand, 6326899 - 6327051
Alignment:
| Q |
185 |
tgtcaatcagtggtgcctgtctcaacatattgatggctaattgagtttctcc---tatctcacataatccattgatcagaataagataactatcatggtt |
281 |
Q |
| |
|
||| |||| || ||||||||||||| | | |||||||| ||| |||||||| ||||||||||| ||| | |||||||||| |||| || || || |
|
|
| T |
6326899 |
tgttaatctgtagtgcctgtctcaaaagctggatggctatttgggtttctcctcctatctcacatactccttggatcagaatagaataagtacgattgtc |
6326998 |
T |
 |
| Q |
282 |
caacagaaaaccgtttttaagtatgatgtcattgtaaaacagcattgctttgt |
334 |
Q |
| |
|
|||| ||||||| | |||||||| ||||||||| ||||| || |||||||||| |
|
|
| T |
6326999 |
caactgaaaaccctgtttaagtacgatgtcattataaaagaggattgctttgt |
6327051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 12535516 - 12535565
Alignment:
| Q |
67 |
atttcagaatataaatcataggcttggtttacaagtctatctttgcagag |
116 |
Q |
| |
|
||||||||| ||||| ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
12535516 |
atttcagaaaataaagcataggcttcgtttacaagtctatcttcgcagag |
12535565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 12540612 - 12540547
Alignment:
| Q |
63 |
aatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgat |
128 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||| | |||| || |||||||| ||| |||||| |
|
|
| T |
12540612 |
aatcatttcagaaaataaatcataggcttcgtttatatgtctttccatgcagagtgtgattatgat |
12540547 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 1717941 - 1717877
Alignment:
| Q |
63 |
aatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatga |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1717941 |
aatcatttcagaatataaatcataggcttggtttacaagtctatctttgcatagtctgaatatga |
1717877 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 1717621 - 1717565
Alignment:
| Q |
408 |
gatgattttatggaataaagagatagctgaagacattttaccttgtctagagtgaca |
464 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| ||| |||| || |||||||||||| |
|
|
| T |
1717621 |
gatgagtttatagaataaagagaaagctgaagccatcttacattttctagagtgaca |
1717565 |
T |
 |
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Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 47924945 - 47925019
Alignment:
| Q |
63 |
aatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgatggagttata |
137 |
Q |
| |
|
||||||||||||||| || ||||||||||| ||||| ||||||||||||||||| ||| |||||| |||||||| |
|
|
| T |
47924945 |
aatcatttcagaatagaagtcataggcttgatttactagtctatctttgcagagggtgagtatgattgagttata |
47925019 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 9066334 - 9066269
Alignment:
| Q |
63 |
aatcatttcagaatataaatcataggcttggtttacaagtctatctttgcagagtctgaatatgat |
128 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| |||| || |||||||||||||| |
|
|
| T |
9066334 |
aatcatttgtgaatataaatcataggcttggtttacaggtctacctttacatagtctgaatatgat |
9066269 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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