View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19405_high_1 (Length: 632)
Name: NF19405_high_1
Description: NF19405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19405_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 588; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 588; E-Value: 0
Query Start/End: Original strand, 7 - 614
Target Start/End: Original strand, 36878258 - 36878865
Alignment:
| Q |
7 |
tccaagaatataaatgatggtgaagtaaaagcaatctttggaatgtgaactattatcatcaatttgattcagcttctcttgaacctttagtccctggtta |
106 |
Q |
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| T |
36878258 |
tccaacaatataaatgatggtgaagtaaaagcaatctttggaatgtgaactattaccatcaatttgattcagcttctcttgaacctttagtccctggtta |
36878357 |
T |
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| Q |
107 |
acacatgcatcacaattggtagaaacactaaggtccggtttacaagaagtgttgaacaatggtgcaggaccaaccctgctgatccaatcttgcttagatt |
206 |
Q |
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| T |
36878358 |
acacatgcatcacaattggtagaaacactaaggtctggtttacaagaagtgttgaacaatggtgcaggaccaaccctgctgatccaatcttgcttagatt |
36878457 |
T |
|
| Q |
207 |
gaacacgagcgcatatgttaggagtgataacaaactgaagtggatcaaagcatgaagacacaaggtcattgttaagtgaaagggaactgagcttagtttg |
306 |
Q |
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| T |
36878458 |
gaacacgagcgcatatgttaggagtgataacaaactgaagtggatcaaagcatgaagacacaaggtcattgttaagtgaaagggaactgagcttagtttg |
36878557 |
T |
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| Q |
307 |
gaagtcttgaaggcatgaagtggaggtagggagatttgggagttggaaaagagagttcttcttgagattttttgctagtgctatgccaaaaagagacaac |
406 |
Q |
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| T |
36878558 |
gaagtcttgaaggcatgaagtggaggtagggagatttgggagttggaaaagagagttcttcttgagattttttgctagtgctatgccaaaaagagacaac |
36878657 |
T |
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| Q |
407 |
aaagtttgacaacatagagttgtttgtgctttgttttgggattgcaagggttggaagttaaggcatgtagaggtgttccaaggaactctgaacacataat |
506 |
Q |
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| T |
36878658 |
aaagtttgacaacatagagttgtttgtgctttgttttgggattgcaagggttggaagttaaggcatgtagaggtgttccaaggaactcttaacacgtaat |
36878757 |
T |
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| Q |
507 |
tcatgtcaactggacatgaagaatttttggtaaagagagagggtgctgctgagattgaatttgtagcaataacaaagatcactagaaccacaaaaatggt |
606 |
Q |
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| T |
36878758 |
tcatgtcaactggacatgaagaatttttggtaaagagagagggtgctgctgagattgaatttgtagcaataacaaagatcactagaaccacaaaaatggt |
36878857 |
T |
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| Q |
607 |
ctccatat |
614 |
Q |
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| T |
36878858 |
ctccatat |
36878865 |
T |
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