View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19405_high_26 (Length: 236)
Name: NF19405_high_26
Description: NF19405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19405_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 5396074 - 5396278
Alignment:
| Q |
14 |
ataaaaggctcagaaacaaaatcaaaagcatcaccatagtgtagttcatgcggaagtatgagatgttgacacgaacacgtgaaattgcttccggtacacc |
113 |
Q |
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| T |
5396074 |
ataaaaggctcagaaacaaaatcaaaagcatcaccatagtgtagttcatgcggaagtatgagatgttgacacgaacacgtgaaattgcttccggtacacc |
5396173 |
T |
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| Q |
114 |
agtggggatgccgagtgaccggatatcaaacatggttttccacggtcgacgagttcctaagccggccttgatccgttgtttgccacgtgttatgtattca |
213 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5396174 |
agtggggatgccgagtgaccggatatcgaacatggttttccacggtcgacgagttcctaagccggccttgatccgttgtttgccacgtgttatgtattca |
5396273 |
T |
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| Q |
214 |
agttt |
218 |
Q |
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||||| |
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| T |
5396274 |
agttt |
5396278 |
T |
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