View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19405_low_22 (Length: 251)
Name: NF19405_low_22
Description: NF19405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19405_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 918840 - 919065
Alignment:
| Q |
8 |
aaaatttgtttcatactgtaatttattttaaaatgtgacatggttgatgagggtgtatatactcaacaaaactacatgaatattattgtgttcgctttat |
107 |
Q |
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| T |
918840 |
aaaatttgtttaatattgtaatttattttaaaatgtgacatggttgatgagggtgtata--ctcaacaaaactacatgaatattattgtgttcgctttat |
918937 |
T |
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| Q |
108 |
ataaattaattggttcctgacattcatatattaagttccttaataaatgatctatatacagaataataatggaataagccacttgagatgaatctagaaa |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||| |
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| T |
918938 |
ataaattaattggttcctgacattcatatattaagttccttaataaatgatctatatacagaataataatggaatcacccacttgagatggatctagaaa |
919037 |
T |
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| Q |
208 |
actactactaaacaagagacggaaaatt |
235 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
919038 |
actactactaaacaagagacggaaaatt |
919065 |
T |
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