View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19405_low_6 (Length: 375)
Name: NF19405_low_6
Description: NF19405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19405_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 7 - 365
Target Start/End: Complemental strand, 31636814 - 31636455
Alignment:
| Q |
7 |
tatataatactggtctaggggtgtgtatacaacattacattatacggctacggttagctgaggtaattaattctgcatttgccgttaccctcaagcttcc |
106 |
Q |
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| T |
31636814 |
tatataatagtggtctagtggtgcgtatacaacattacattatacgactacggttagctgaggtaattaattctgcatttgccgttaccctcaagcttcc |
31636715 |
T |
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| Q |
107 |
tagaaacatcaacaaataaacnnnnnnntctcatagaaatttaaaatttccacccattgaaagtgaaacacgactaagttattattgagtataatcaact |
206 |
Q |
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| T |
31636714 |
tagaaacatcaacaaataaacaaaaaaatctcatagaaatttaaaatttccacccattgaaagtgaaacacgactaagttattattgaatataataaact |
31636615 |
T |
|
| Q |
207 |
acgcgtagttt-gtttatttcagacattgatttatatcccttttagtgctattcctctttccaactaaacctattctaactttctttcttcggctgcaag |
305 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31636614 |
acgcgtagttttgtttatttcagacattgatttatatcccttttagtgctattcctctttccaactaaacctattctaactttctttcttcggctgcaag |
31636515 |
T |
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| Q |
306 |
aatgaaacctcttcttcatccatcttcttttctctttttctccgtgatacttttgatgat |
365 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
31636514 |
aatgaaacctcttcttcatccatcttcttttctctttttctccgtgatgcttttgatgat |
31636455 |
T |
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