View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19406_low_11 (Length: 411)

Name: NF19406_low_11
Description: NF19406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19406_low_11
NF19406_low_11
[»] chr7 (6 HSPs)
chr7 (1-257)||(38319119-38319375)
chr7 (258-394)||(38319441-38319582)
chr7 (11-204)||(8950178-8950371)
chr7 (168-218)||(19794396-19794446)
chr7 (162-218)||(13931842-13931898)
chr7 (163-219)||(15736777-15736833)
[»] chr3 (6 HSPs)
chr3 (1-212)||(52604284-52604495)
chr3 (11-210)||(51858870-51859067)
chr3 (98-217)||(49967184-49967303)
chr3 (36-189)||(11765085-11765238)
chr3 (106-191)||(36679770-36679855)
chr3 (171-223)||(11758850-11758902)
[»] chr5 (5 HSPs)
chr5 (15-204)||(13576499-13576688)
chr5 (11-144)||(13518335-13518472)
chr5 (115-178)||(13579153-13579216)
chr5 (171-217)||(42909050-42909096)
chr5 (169-217)||(42910044-42910092)
[»] chr4 (3 HSPs)
chr4 (1-150)||(15067840-15067989)
chr4 (52-210)||(26885852-26886009)
chr4 (183-217)||(19716903-19716937)
[»] chr6 (4 HSPs)
chr6 (112-191)||(641222-641301)
chr6 (168-217)||(35176248-35176297)
chr6 (183-217)||(35177347-35177381)
chr6 (163-219)||(1579542-1579598)
[»] chr2 (2 HSPs)
chr2 (330-394)||(7195142-7195206)
chr2 (258-311)||(7195074-7195127)
[»] chr1 (1 HSPs)
chr1 (168-217)||(48980705-48980754)
[»] chr8 (1 HSPs)
chr8 (162-218)||(32057264-32057320)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 38319119 - 38319375
Alignment:
Q  1 aaatattcatatttaatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcacctggtaacccacaactccatccaaacagat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38319119 aaatattcatatttaatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcaccaggtaacccacaactccatccaaacagat 38319218  T
Q  101 ctcagccgtccgcattaaaataatattaaatgaacggtccagattgaattgtggaacaattatgcacaacttgtgcatagagcacaaatttatgtcttgt 200  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  38319219 ctcagccgttcgcattaaaataatattaaatgaacggttcagattgaattttggaacaattatgcataacttgtgcatggagcacaaatttatgtcttgt 38319318  T
Q  201 gcatgctaaatgccacccattttcacaagtttttcaatcacttttgcgcaagaaaat 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38319319 gcatgctaaatgccacccattttcacaagtttttcaatcacttttgcacaagaaaat 38319375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 258 - 394
Target Start/End: Original strand, 38319441 - 38319582
Alignment:
Q  258 ccactgaaccacacacaaagagacaaaacacgccagaagctatagctgggtta-----cttagcattcatcttccctcaaaaaatcagtctttcttcttt 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||     |||||||||||||||||| ||||||||||| |||||||||||    
T  38319441 ccactgaaccacacacaaagagacaaaacacgccagaagctatagctaggttaggggacttagcattcatcttcccgcaaaaaatcagcctttcttcttt 38319540  T
Q  353 aaacgtgtagttgctatattcagtaataagaccatacaaggt 394  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  38319541 aaacgtgtagttgctatattcggtaataagaccatacaaggt 38319582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 8950178 - 8950371
Alignment:
Q  11 atttaatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcacctggtaacccacaactccatccaaacagatctcagccgtc 110  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |  || |||||| |||||||||||||| |||| | ||||     
T  8950178 atttaatcaaaagggtgggtcccgcgtgggacccacatgacctctctccctttttggcagcaagtcacccactactccatccaaacaaatcttaaccgtt 8950277  T
Q  111 cgcattaaaataatattaaatgaacggtccagattgaattgtggaacaattatgcacaacttgtgcatagagcacaaatttatgtcttgtgcat 204  Q
     |||||||||||||| ||||||||||||||||||| ||||   | | || | || ||||||||||||| | ||||||||| ||  |||||||||    
T  8950278 ggcattaaaataataataaatgaacggtccagatttaatttacggataaatttgtacaacttgtgcatggtgcacaaattcatcacttgtgcat 8950371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 19794446 - 19794396
Alignment:
Q  168 aacttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccaccc 218  Q
    ||||||||||| | ||||||||||||   ||||||||||||||||||||||    
T  19794446 aacttgtgcatggtgcacaaatttatcaattgtgcatgctaaatgccaccc 19794396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 13931842 - 13931898
Alignment:
Q  162 atgcacaacttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccaccc 218  Q
    |||||||| |||||||| | |||||||| | |  |||||||||||||||||||||||    
T  13931842 atgcacaagttgtgcatggtgcacaaatctttcccttgtgcatgctaaatgccaccc 13931898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 15736833 - 15736777
Alignment:
Q  163 tgcacaacttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccaccca 219  Q
    |||||||||||||||| |||||||||| | |  |||||||||||||||  |||||||    
T  15736833 tgcacaacttgtgcatggagcacaaatctttcccttgtgcatgctaaaccccaccca 15736777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 2e-87; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 52604495 - 52604284
Alignment:
Q  1 aaatattcatatttaatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcacctggtaacccacaactccatccaaacagat 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||||||| ||    
T  52604495 aaatattcatatttaatcaaaagggtggatcccgcatgggacccacatcaactctctccctttatggcagcaggtaatccactactccatccaaacaaat 52604396  T
Q  101 ctcagccgtccgcattaaaataatattaaatgaacggtccagattgaattgtggaacaattatgcacaacttgtgcatagagcacaaatttatgtcttgt 200  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  52604395 ctcagccatccgcattaaaataatattaaatgaacagtccagattgaattttggaacaattatgcacaacttgtgcatggtgcacaaatttatgtcttgt 52604296  T
Q  201 gcatgctaaatg 212  Q
    ||||||||||||    
T  52604295 gcatgctaaatg 52604284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 51858870 - 51859067
Alignment:
Q  11 atttaatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcacctggtaacccacaactccatccaaacagatctcagccgtc 110  Q
    ||||||||||||||||||||||||||||||||||||||   | |||||||||| ||||| | ||| |||||| ||||| |||||||| |||||| |||||    
T  51858870 atttaatcaaaagggtgggtcccgcgtgggacccacatg--ccctctccctttttggcagcaggtcacccactactccgtccaaacaaatctcaaccgtc 51858967  T
Q  111 cgcattaaaataatattaaatgaacggtccagattgaa-ttgtggaacaattatgcacaacttgtgcatagagcacaaatttatgtcttgtgcatgctaa 209  Q
     | |||||||||||| ||||||||||||||||||| || ||  |||| |||| |||||||||||||||| | |||||||| | |  ||||||||||||||    
T  51858968 ggtattaaaataataataaatgaacggtccagatttaatttacggaaaaatt-tgcacaacttgtgcatggtgcacaaatctttcccttgtgcatgctaa 51859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 49967184 - 49967303
Alignment:
Q  98 gatctcagccgtccgcattaaaataatattaaatgaacggtccagattgaattgtggaacaattatgcacaacttgtgcatagagcacaaatttatgtct 197  Q
    ||||||| ||||| |||||||||||||| ||||| ||||||| ||||| ||||  ||||||||| |||||||||||||||| | |||||||||  | | |    
T  49967184 gatctcaaccgtcggcattaaaataataataaataaacggtctagatttaatttaggaacaattttgcacaacttgtgcatggtgcacaaattctttttt 49967283  T
Q  198 tgtgcatgctaaatgccacc 217  Q
    ||||||| | ||||||||||    
T  49967284 tgtgcataccaaatgccacc 49967303  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 189
Target Start/End: Original strand, 11765085 - 11765238
Alignment:
Q  36 gtgggacccacatcaactctctccctttatggcacctggtaacccacaactccatccaaacagatctcagccgtccgcattaaaataatattaaatgaac 135  Q
    |||||||||||||   |||||||||| || |||| |  || ||||||  ||||||||||||| |||||| ||||| |||||||||||||| |||||||||    
T  11765085 gtgggacccacatgccctctctccctgtaaggcagcaagtcacccactcctccatccaaacaaatctcaaccgtcggcattaaaataataataaatgaac 11765184  T
Q  136 ggtccagattgaattgtggaacaattatgcacaacttgtgcatagagcacaaat 189  Q
    ||| |||||| ||||  ||  || || |||||||||| ||||| | ||||||||    
T  11765185 ggtacagatttaatttagggtcatttttgcacaacttttgcatggtgcacaaat 11765238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 36679855 - 36679770
Alignment:
Q  106 ccgtccgcattaaaataatattaaatgaacggtccagattgaattgtggaacaattatgcacaacttgtgcatagagcacaaattt 191  Q
    ||||| |||||||||||||| |||||||||||| |||||| || |  ||||||||| |||| || |||||||| | ||||||||||    
T  36679855 ccgtcggcattaaaataataataaatgaacggttcagatttaagttaggaacaattttgcataatttgtgcatggtgcacaaattt 36679770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 11758902 - 11758850
Alignment:
Q  171 ttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccacccatttt 223  Q
    |||||||| | |||||||| | |  ||||||||||||||||||||||||||||    
T  11758902 ttgtgcatggtgcacaaatcttttccttgtgcatgctaaatgccacccatttt 11758850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 13576688 - 13576499
Alignment:
Q  15 aatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcacctggtaacccacaactccatccaaacagatctcagccgtccgca 114  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||| ||||| | ||| |||||| |||||||||||||| |||| | ||||  |||    
T  13576688 aatcaaaagggtgggtcccgcgtgggacccacacgacctctctccctttttggcagcaggtcacccactactccatccaaacaaatcttaaccgttggca 13576589  T
Q  115 ttaaaataatattaaatgaacggtccagattgaa-ttgtggaacaattatgcacaacttgtgcatagagcacaaatttatgtcttgtgcat 204  Q
    ||||||||||| |||||||||| |||||||| || || ||||  |||| |||||||||||||||| | ||||||||| ||  |||||||||    
T  13576588 ttaaaataataataaatgaacgatccagatttaatttatggataaatt-tgcacaacttgtgcatggtgcacaaattcatcacttgtgcat 13576499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 13518335 - 13518472
Alignment:
Q  11 atttaatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcacctggt----aacccacaactccatccaaacagatctcagc 106  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |  ||     || ||| |||||||||||||| |||||| |    
T  13518335 atttaatcaaaagggtgggtcccgcgtgggacccacatgccctctctccctttttggcagcatgtcacacactcacgactccatccaaacaaatctcaac 13518434  T
Q  107 cgtccgcattaaaataatattaaatgaacggtccagat 144  Q
    ||||  ||||||||||||| ||||||||||||||||||    
T  13518435 cgtcgacattaaaataataataaatgaacggtccagat 13518472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 13579216 - 13579153
Alignment:
Q  115 ttaaaataatattaaatgaacggtccagattgaattgtggaacaattatgcacaacttgtgcat 178  Q
    |||||||| |||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||    
T  13579216 ttaaaatattattaaatgaacggtccagattaaattaaggaacaattatgcacaaattgtgcat 13579153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 42909096 - 42909050
Alignment:
Q  171 ttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccacc 217  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||    
T  42909096 ttgtgcatggtgcacaaatttatgtcttgtgcatgctaaatgtcacc 42909050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 42910044 - 42910092
Alignment:
Q  169 acttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccacc 217  Q
    ||||||| || | |||||||||||||| |||||||||||||||||||||    
T  42910044 acttgtgtatggtgcacaaatttatgttttgtgcatgctaaatgccacc 42910092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15067989 - 15067840
Alignment:
Q  1 aaatattcatatttaatcaaaagggtgggtcccgcgtgggacccacatcaactctctccctttatggcacctggtaacccacaactccatccaaacagat 100  Q
    ||||||||| |||||||||||||||| ||||| |||||||||||||||   ||||||||||||| |||| | | | |||||| |||||||||||||| ||    
T  15067989 aaatattcagatttaatcaaaagggttggtccagcgtgggacccacatgctctctctccctttaaggcagcagatcacccactactccatccaaacaaat 15067890  T
Q  101 ctcagccgtccgcattaaaataatattaaatgaacggtccagattgaatt 150  Q
    ||||  ||||  ||||||||||||| ||||| ||||||||||||| ||||    
T  15067889 ctcaatcgtcgacattaaaataataataaataaacggtccagatttaatt 15067840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 210
Target Start/End: Complemental strand, 26886009 - 26885852
Alignment:
Q  52 ctctctccctttatggcacctggtaacccacaactccatccaaacagatctcagccgtccgcattaaaataatattaaatgaacggtccagattgaattg 151  Q
    |||||||||||| || || | ||| |||||| |||||||||||||| |||||| || ||  ||||||||||||| |||||||| |||||| ||| ||||     
T  26886009 ctctctccctttttg-cagcaggtcacccactactccatccaaacaaatctcaaccctcgacattaaaataataataaatgaatggtccatatttaattt 26885911  T
Q  152 tggaacaattatgcacaacttgtgcatagagcacaaatttatgtcttgtgcatgctaaa 210  Q
      | |||| | |||||||||||||||| | |||||||| | |  |||||||||||||||    
T  26885910 acggacaaatttgcacaacttgtgcatggtgcacaaatctttcccttgtgcatgctaaa 26885852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 19716903 - 19716937
Alignment:
Q  183 cacaaatttatgtcttgtgcatgctaaatgccacc 217  Q
    |||||||||||||||||||||||||||||||||||    
T  19716903 cacaaatttatgtcttgtgcatgctaaatgccacc 19716937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 641222 - 641301
Alignment:
Q  112 gcattaaaataatattaaatgaacggtccagattgaattgtggaacaattatgcacaacttgtgcatagagcacaaattt 191  Q
    |||||||||||||| |||||||||||| |||||| || |  ||||||||| ||||||| |||||||| | ||||||||||    
T  641222 gcattaaaataataataaatgaacggttcagatttaagttaggaacaattttgcacaatttgtgcatggtgcacaaattt 641301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 35176297 - 35176248
Alignment:
Q  168 aacttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccacc 217  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  35176297 aacttgtgcatggtgcacaaatttatatcttgtgcatgctaaatgccacc 35176248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 35177347 - 35177381
Alignment:
Q  183 cacaaatttatgtcttgtgcatgctaaatgccacc 217  Q
    |||||||||||||||||| ||||||||||||||||    
T  35177347 cacaaatttatgtcttgttcatgctaaatgccacc 35177381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 1579542 - 1579598
Alignment:
Q  163 tgcacaacttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccaccca 219  Q
    |||||||||||||||| |||||||||| | |  |||||||||||||||  |||||||    
T  1579542 tgcacaacttgtgcatggagcacaaatctttcccttgtgcatgctaaaccccaccca 1579598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 7195142 - 7195206
Alignment:
Q  330 caaaaaatcagtctttcttctttaaacgtgtagttgctatattcagtaataagaccatacaaggt 394  Q
    ||||||| |||  ||||||| ||||| || ||||||||||| |||||||||||||||||||||||    
T  7195142 caaaaaaccaggttttcttccttaaatgtatagttgctatactcagtaataagaccatacaaggt 7195206  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 7195074 - 7195127
Alignment:
Q  258 ccactgaaccacacacaaagagacaaaacacgccagaagctatagctgggttac 311  Q
    |||||| || |||||||||||||||||||| ||||||||| | |||||| ||||    
T  7195074 ccactgtacaacacacaaagagacaaaacatgccagaagcaacagctggtttac 7195127  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 48980754 - 48980705
Alignment:
Q  168 aacttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccacc 217  Q
    |||||||| || | |||||| |||||| ||||||||||||||||||||||    
T  48980754 aacttgtgaatggtgcacaagtttatgacttgtgcatgctaaatgccacc 48980705  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 32057320 - 32057264
Alignment:
Q  162 atgcacaacttgtgcatagagcacaaatttatgtcttgtgcatgctaaatgccaccc 218  Q
    |||||||| |||||||| | |||||||| | |  |||||||||||||||||||||||    
T  32057320 atgcacaagttgtgcatggtgcacaaatctttcccttgtgcatgctaaatgccaccc 32057264  T

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