View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19406_low_15 (Length: 381)
Name: NF19406_low_15
Description: NF19406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19406_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 7 - 370
Target Start/End: Original strand, 35798731 - 35799093
Alignment:
| Q |
7 |
ttttggtcaagcatattttgagtctttagtttcaaaactcaattcaattgaattaattcatgttggaaatagtttcttgatttttagtggttgtaccaaa |
106 |
Q |
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| T |
35798731 |
ttttggtcaagcatattttgagtctttagtttcaaaactcaattcaattgaattaattcatgttggaaatagtttcttgatttttagtggttgtaccaaa |
35798830 |
T |
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| Q |
107 |
aggagatgaatctagttaaatgtgattatattttaagtacaacttacattcttaaaatcatatactagatctagatcatatttttacttaccgcaacact |
206 |
Q |
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| T |
35798831 |
aggagataaatctagttaaatgtgattatattttaagtacaacttacattct-aaaatcatatactagatctagatcatatttttacttaccgcaacact |
35798929 |
T |
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| Q |
207 |
agcaaaaacttgtaatggcagataacattttcaatgcaaaaataattgactcagttgggatcaataggtctgaattgaaatactacctaaaaatagttga |
306 |
Q |
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| T |
35798930 |
agcaaaaacttgtcatggcagataacattttcaatgcaaaaataattgactcagttgggatcaataggtctgaattgaaatactacctaaaaatagttga |
35799029 |
T |
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| Q |
307 |
aatagtagcaaatacgttgctatcaactgtaattttgtttttgaagcattgattcaaatatttt |
370 |
Q |
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| T |
35799030 |
aatagtagcaaatacgttgctatcaactgtaattttgtttttgaagcattgattcaaatatttt |
35799093 |
T |
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