View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19406_low_20 (Length: 328)

Name: NF19406_low_20
Description: NF19406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19406_low_20
NF19406_low_20
[»] chr7 (45 HSPs)
chr7 (13-201)||(19590884-19591072)
chr7 (13-201)||(38859000-38859188)
chr7 (13-201)||(32004612-32004800)
chr7 (13-200)||(19830779-19830965)
chr7 (13-199)||(35288903-35289089)
chr7 (13-201)||(37787126-37787314)
chr7 (13-202)||(2658836-2659025)
chr7 (13-201)||(34533789-34533977)
chr7 (16-201)||(23952728-23952914)
chr7 (13-196)||(4641803-4641983)
chr7 (13-204)||(29099843-29100036)
chr7 (38-200)||(37786766-37786927)
chr7 (38-201)||(19830418-19830580)
chr7 (38-199)||(19590525-19590685)
chr7 (38-199)||(32004999-32005159)
chr7 (38-196)||(29100236-29100393)
chr7 (38-200)||(38858642-38858803)
chr7 (38-201)||(34534176-34534338)
chr7 (38-201)||(35289286-35289448)
chr7 (38-196)||(4641443-4641600)
chr7 (38-201)||(2659225-2659387)
chr7 (83-201)||(28583437-28583555)
chr7 (73-201)||(38160949-38161077)
chr7 (38-193)||(23953114-23953268)
chr7 (38-201)||(4478085-4478247)
chr7 (87-198)||(28584355-28584466)
chr7 (13-100)||(4477800-4477887)
chr7 (38-197)||(9181534-9181692)
chr7 (38-200)||(34595158-34595319)
chr7 (19-197)||(9393738-9393914)
chr7 (38-196)||(35578902-35579058)
chr7 (38-201)||(7732486-7732648)
chr7 (38-196)||(26026320-26026478)
chr7 (38-199)||(27245203-27245364)
chr7 (135-200)||(39137014-39137080)
chr7 (146-199)||(26048439-26048492)
chr7 (38-201)||(48247977-48248140)
chr7 (60-200)||(49064033-49064171)
chr7 (146-201)||(787279-787334)
chr7 (38-196)||(25637584-25637741)
chr7 (38-100)||(28687885-28687947)
chr7 (146-201)||(48247585-48247640)
chr7 (38-75)||(26048071-26048108)
chr7 (38-94)||(32427406-32427461)
chr7 (146-198)||(39388761-39388813)
[»] chr6 (45 HSPs)
chr6 (13-201)||(22219712-22219900)
chr6 (13-201)||(11445346-11445534)
chr6 (13-201)||(12935155-12935343)
chr6 (13-200)||(20741460-20741650)
chr6 (13-201)||(23075487-23075675)
chr6 (13-196)||(18504922-18505105)
chr6 (13-200)||(31470314-31470501)
chr6 (38-196)||(10899942-10900100)
chr6 (13-201)||(2319670-2319857)
chr6 (13-199)||(18257496-18257682)
chr6 (19-198)||(15827639-15827819)
chr6 (38-202)||(20741097-20741260)
chr6 (38-201)||(18257135-18257297)
chr6 (38-199)||(10900315-10900475)
chr6 (38-200)||(15828026-15828187)
chr6 (36-209)||(11276580-11276753)
chr6 (38-199)||(11276967-11277127)
chr6 (13-199)||(4811616-4811801)
chr6 (38-198)||(31470701-31470860)
chr6 (38-201)||(12935542-12935704)
chr6 (38-201)||(28472635-28472796)
chr6 (38-201)||(29859824-29859985)
chr6 (39-198)||(18505305-18505463)
chr6 (38-201)||(11444985-11445147)
chr6 (38-199)||(1149816-1149977)
chr6 (38-196)||(2322604-2322760)
chr6 (102-200)||(23073998-23074096)
chr6 (83-197)||(29033436-29033550)
chr6 (86-197)||(29035069-29035180)
chr6 (111-201)||(1149463-1149553)
chr6 (38-199)||(4811372-4811532)
chr6 (83-201)||(18296143-18296261)
chr6 (83-196)||(3835155-3835268)
chr6 (36-200)||(35163570-35163734)
chr6 (13-69)||(1149558-1149614)
chr6 (143-199)||(22534214-22534270)
chr6 (20-86)||(32836114-32836179)
chr6 (39-201)||(5120856-5121017)
chr6 (13-57)||(28472997-28473041)
chr6 (38-199)||(31073528-31073688)
chr6 (38-75)||(28636582-28636619)
chr6 (38-75)||(31573848-31573885)
chr6 (39-106)||(25468943-25469010)
chr6 (146-198)||(30250722-30250774)
chr6 (152-200)||(31574224-31574272)
[»] chr8 (41 HSPs)
chr8 (13-200)||(13224998-13225185)
chr8 (13-212)||(19176277-19176476)
chr8 (13-200)||(44831246-44831433)
chr8 (13-199)||(41681493-41681679)
chr8 (13-196)||(9928912-9929095)
chr8 (13-200)||(11656816-11657003)
chr8 (13-196)||(12572210-12572393)
chr8 (13-198)||(31133579-31133764)
chr8 (13-197)||(33328499-33328683)
chr8 (13-201)||(33742920-33743107)
chr8 (40-201)||(34540934-34541095)
chr8 (39-201)||(41681132-41681292)
chr8 (38-201)||(19176675-19176837)
chr8 (38-201)||(12571861-12572024)
chr8 (38-201)||(31133218-31133380)
chr8 (44-201)||(4629795-4629952)
chr8 (38-201)||(11656453-11656616)
chr8 (38-200)||(9930042-9930203)
chr8 (38-196)||(33328161-33328318)
chr8 (38-201)||(44831630-44831792)
chr8 (38-195)||(13224645-13224800)
chr8 (91-201)||(11336959-11337069)
chr8 (90-199)||(9178071-9178180)
chr8 (13-107)||(9177724-9177818)
chr8 (200-312)||(27003475-27003589)
chr8 (38-196)||(4630177-4630328)
chr8 (38-153)||(33743304-33743418)
chr8 (87-200)||(8073985-8074097)
chr8 (90-201)||(10918124-10918235)
chr8 (38-207)||(35427198-35427366)
chr8 (38-198)||(28254812-28254971)
chr8 (83-120)||(43958264-43958301)
chr8 (166-201)||(9177665-9177700)
chr8 (146-201)||(15255851-15255906)
chr8 (159-200)||(10919691-10919732)
chr8 (38-94)||(18805267-18805322)
chr8 (146-201)||(6115604-6115659)
chr8 (151-197)||(43958211-43958257)
chr8 (146-199)||(9796726-9796779)
chr8 (39-199)||(18049590-18049750)
chr8 (148-200)||(599531-599583)
[»] chr4 (84 HSPs)
chr4 (13-199)||(22434179-22434365)
chr4 (13-199)||(46193405-46193591)
chr4 (13-199)||(45082783-45082969)
chr4 (13-201)||(15523233-15523421)
chr4 (13-201)||(20470870-20471058)
chr4 (13-201)||(23494802-23494990)
chr4 (13-201)||(51021155-51021342)
chr4 (13-200)||(11153145-11153332)
chr4 (13-199)||(25447247-25447433)
chr4 (13-199)||(12234688-12234874)
chr4 (13-197)||(2118295-2118480)
chr4 (13-201)||(54995067-54995255)
chr4 (13-200)||(25938030-25938217)
chr4 (18-196)||(48526545-48526723)
chr4 (13-201)||(4219918-4220106)
chr4 (13-196)||(18751602-18751785)
chr4 (13-182)||(12503453-12503622)
chr4 (73-201)||(33109883-33110011)
chr4 (38-197)||(46193790-46193948)
chr4 (38-202)||(25447621-25447784)
chr4 (38-197)||(33109686-33109844)
chr4 (38-199)||(11153532-11153692)
chr4 (38-201)||(25937668-25937830)
chr4 (39-197)||(4219559-4219716)
chr4 (39-201)||(12234327-12234488)
chr4 (38-200)||(15523619-15523780)
chr4 (38-200)||(22170322-22170482)
chr4 (38-197)||(23494445-23494603)
chr4 (38-197)||(38962204-38962362)
chr4 (38-201)||(22434563-22434723)
chr4 (38-200)||(48526195-48526355)
chr4 (38-201)||(51020795-51020957)
chr4 (38-196)||(2118681-2118837)
chr4 (85-197)||(18763951-18764063)
chr4 (84-201)||(54995498-54995614)
chr4 (91-198)||(20958296-20958403)
chr4 (83-199)||(35363029-35363146)
chr4 (85-201)||(48293592-48293708)
chr4 (93-201)||(48708293-48708401)
chr4 (38-201)||(45082430-45082590)
chr4 (71-200)||(10258304-10258433)
chr4 (83-198)||(44892577-44892692)
chr4 (200-312)||(35537648-35537762)
chr4 (83-181)||(43243709-43243807)
chr4 (83-196)||(16690939-16691052)
chr4 (85-201)||(48713777-48713893)
chr4 (90-199)||(48294979-48295088)
chr4 (73-192)||(20957196-20957315)
chr4 (73-199)||(16691491-16691616)
chr4 (83-181)||(43281220-43281317)
chr4 (132-200)||(16318254-16318322)
chr4 (90-198)||(44890518-44890626)
chr4 (38-130)||(12503821-12503912)
chr4 (38-200)||(17503973-17504133)
chr4 (73-141)||(43242328-43242396)
chr4 (38-202)||(46737041-46737204)
chr4 (91-199)||(55189528-55189636)
chr4 (26-196)||(40160465-40160633)
chr4 (146-200)||(55677451-55677505)
chr4 (38-201)||(12593409-12593571)
chr4 (20-201)||(35193672-35193850)
chr4 (38-130)||(17504345-17504436)
chr4 (84-199)||(30597951-30598065)
chr4 (38-200)||(12593023-12593184)
chr4 (38-196)||(14439831-14439988)
chr4 (146-197)||(44219377-44219428)
chr4 (19-57)||(10795692-10795730)
chr4 (38-199)||(34789382-34789542)
chr4 (38-100)||(35193406-35193467)
chr4 (38-196)||(45838933-45839092)
chr4 (38-201)||(19528867-19529030)
chr4 (38-197)||(34789768-34789927)
chr4 (38-201)||(229159-229321)
chr4 (38-196)||(229545-229702)
chr4 (38-201)||(34807114-34807277)
chr4 (38-197)||(24336149-24336307)
chr4 (146-201)||(33689827-33689882)
chr4 (146-201)||(41608908-41608963)
chr4 (83-138)||(44220806-44220861)
chr4 (146-201)||(45838545-45838600)
chr4 (146-197)||(54440573-54440624)
chr4 (146-200)||(21034730-21034784)
chr4 (38-80)||(46736774-46736815)
chr4 (38-75)||(26974407-26974444)
[»] chr3 (83 HSPs)
chr3 (13-199)||(37727289-37727475)
chr3 (13-199)||(25853234-25853420)
chr3 (13-201)||(4275723-4275911)
chr3 (20-200)||(39555577-39555757)
chr3 (13-201)||(43973799-43973987)
chr3 (13-200)||(31778652-31778839)
chr3 (13-201)||(17464489-17464677)
chr3 (21-201)||(26837358-26837538)
chr3 (13-200)||(20840920-20841107)
chr3 (13-200)||(27393660-27393847)
chr3 (13-201)||(5137340-5137528)
chr3 (13-201)||(22424812-22425000)
chr3 (13-201)||(29801775-29801963)
chr3 (13-199)||(23644823-23645010)
chr3 (13-196)||(32534962-32535145)
chr3 (15-200)||(30098121-30098309)
chr3 (13-196)||(24300560-24300742)
chr3 (13-196)||(26274570-26274753)
chr3 (15-196)||(41047060-41047239)
chr3 (38-201)||(5136978-5137140)
chr3 (38-201)||(24300941-24301103)
chr3 (38-201)||(31779037-31779199)
chr3 (38-199)||(39555962-39556122)
chr3 (38-201)||(20840558-20840720)
chr3 (38-200)||(37726928-37727089)
chr3 (38-200)||(23644461-23644622)
chr3 (38-196)||(41046703-41046860)
chr3 (43-201)||(48452987-48453144)
chr3 (38-201)||(30104480-30104641)
chr3 (38-200)||(27393962-27394123)
chr3 (38-199)||(32535344-32535508)
chr3 (38-199)||(43973441-43973601)
chr3 (83-196)||(25612406-25612519)
chr3 (87-199)||(29801356-29801468)
chr3 (38-197)||(25853612-25853770)
chr3 (38-201)||(26837741-26837902)
chr3 (49-195)||(22425209-22425354)
chr3 (83-201)||(51474763-51474881)
chr3 (38-200)||(17464876-17465038)
chr3 (73-199)||(23228427-23228552)
chr3 (88-201)||(45965936-45966049)
chr3 (85-198)||(51473429-51473542)
chr3 (83-199)||(50116838-50116954)
chr3 (38-201)||(26274952-26275113)
chr3 (83-198)||(32697129-32697244)
chr3 (83-201)||(37220555-37220673)
chr3 (113-201)||(37222030-37222118)
chr3 (87-202)||(25420574-25420689)
chr3 (102-198)||(25419145-25419242)
chr3 (85-180)||(18010176-18010271)
chr3 (38-200)||(51827956-51828117)
chr3 (38-201)||(27200078-27200239)
chr3 (85-196)||(32695706-32695817)
chr3 (19-105)||(8873784-8873869)
chr3 (38-196)||(22370599-22370757)
chr3 (38-199)||(55192118-55192277)
chr3 (23-111)||(2323466-2323553)
chr3 (38-198)||(37075687-37075848)
chr3 (38-201)||(55389603-55389765)
chr3 (38-201)||(49407794-49407955)
chr3 (38-201)||(52375717-52375879)
chr3 (13-198)||(37076034-37076219)
chr3 (38-203)||(49720367-49720531)
chr3 (20-94)||(50900637-50900710)
chr3 (38-197)||(52237203-52237361)
chr3 (38-197)||(36701482-36701640)
chr3 (39-200)||(330223-330383)
chr3 (38-75)||(32730775-32730812)
chr3 (38-201)||(47431694-47431857)
chr3 (85-200)||(23227261-23227370)
chr3 (38-199)||(40275093-40275255)
chr3 (38-100)||(50662798-50662860)
chr3 (150-200)||(14654686-14654736)
chr3 (38-214)||(40838638-40838812)
chr3 (146-200)||(41998721-41998775)
chr3 (38-80)||(52236935-52236976)
chr3 (38-75)||(40839038-40839075)
chr3 (38-75)||(51828343-51828380)
chr3 (38-75)||(52375450-52375487)
chr3 (38-106)||(8874072-8874138)
chr3 (168-200)||(25611497-25611529)
chr3 (148-200)||(46013421-46013473)
chr3 (148-200)||(49720856-49720908)
[»] chr5 (60 HSPs)
chr5 (13-201)||(5818927-5819115)
chr5 (13-201)||(19359495-19359683)
chr5 (13-197)||(2864756-2864940)
chr5 (13-201)||(8647797-8647985)
chr5 (13-200)||(8461290-8461477)
chr5 (13-201)||(24331557-24331747)
chr5 (13-200)||(29454739-29454926)
chr5 (13-199)||(164191-164376)
chr5 (15-197)||(14215243-14215425)
chr5 (13-201)||(18182968-18183156)
chr5 (13-200)||(25000448-25000635)
chr5 (13-201)||(16018946-16019134)
chr5 (13-197)||(15371873-15372060)
chr5 (20-199)||(15709335-15709513)
chr5 (38-201)||(2865140-2865302)
chr5 (38-201)||(18183354-18183516)
chr5 (38-199)||(5819314-5819474)
chr5 (38-199)||(8647438-8647598)
chr5 (38-201)||(24362221-24362383)
chr5 (42-199)||(19359136-19359292)
chr5 (38-201)||(15372258-15372420)
chr5 (38-200)||(29455127-29455288)
chr5 (13-193)||(24361843-24362022)
chr5 (38-201)||(15708969-15709130)
chr5 (38-201)||(8460928-8461090)
chr5 (13-193)||(24325218-24325397)
chr5 (38-201)||(14215628-14215790)
chr5 (38-203)||(14463906-14464069)
chr5 (83-199)||(7349446-7349562)
chr5 (38-201)||(164576-164738)
chr5 (83-200)||(16018588-16018704)
chr5 (83-198)||(4222151-4222266)
chr5 (83-199)||(4623148-4623264)
chr5 (83-199)||(7348559-7348675)
chr5 (38-177)||(25000112-25000250)
chr5 (38-197)||(24331945-24332107)
chr5 (83-199)||(4219663-4219779)
chr5 (83-186)||(4624654-4624757)
chr5 (16-111)||(10721873-10721967)
chr5 (37-117)||(14462686-14462770)
chr5 (83-198)||(6018315-6018429)
chr5 (23-200)||(41834430-41834606)
chr5 (73-193)||(6019189-6019309)
chr5 (20-111)||(27307148-27307238)
chr5 (13-111)||(28494931-28495029)
chr5 (38-201)||(28290030-28290192)
chr5 (38-197)||(22651347-22651505)
chr5 (38-201)||(15029695-15029857)
chr5 (20-197)||(16752938-16753114)
chr5 (38-100)||(28495227-28495288)
chr5 (38-100)||(32305916-32305977)
chr5 (38-201)||(21371082-21371244)
chr5 (38-94)||(27307444-27307499)
chr5 (38-200)||(28289683-28289844)
chr5 (13-44)||(14463732-14463763)
chr5 (13-111)||(13557079-13557176)
chr5 (83-117)||(13814156-13814190)
chr5 (146-203)||(18150217-18150274)
chr5 (146-207)||(32697719-32697780)
chr5 (138-202)||(22651796-22651860)
[»] chr2 (63 HSPs)
chr2 (13-201)||(22374684-22374872)
chr2 (13-197)||(40815347-40815531)
chr2 (13-200)||(18450829-18451016)
chr2 (15-196)||(40027501-40027682)
chr2 (13-201)||(43058692-43058879)
chr2 (13-198)||(239711-239896)
chr2 (12-201)||(7446704-7446893)
chr2 (13-201)||(11090879-11091067)
chr2 (13-200)||(28616973-28617160)
chr2 (13-201)||(1978468-1978656)
chr2 (13-199)||(3025822-3026006)
chr2 (38-201)||(26538463-26538626)
chr2 (20-196)||(8425358-8425533)
chr2 (13-197)||(14432500-14432684)
chr2 (38-201)||(11090519-11090681)
chr2 (38-201)||(239351-239512)
chr2 (38-201)||(22374318-22374480)
chr2 (38-201)||(40815730-40815892)
chr2 (38-200)||(40027139-40027300)
chr2 (38-203)||(1978104-1978268)
chr2 (38-201)||(18451216-18451378)
chr2 (38-196)||(14432145-14432302)
chr2 (38-200)||(26538096-26538257)
chr2 (83-199)||(28616613-28616729)
chr2 (38-196)||(8425745-8425902)
chr2 (83-201)||(28847124-28847242)
chr2 (83-200)||(20444748-20444865)
chr2 (38-199)||(43058333-43058493)
chr2 (42-200)||(7446341-7446497)
chr2 (84-201)||(20440461-20440578)
chr2 (38-210)||(3025455-3025625)
chr2 (84-198)||(35781093-35781207)
chr2 (83-199)||(35779708-35779824)
chr2 (86-203)||(15551495-15551612)
chr2 (73-197)||(8972239-8972363)
chr2 (83-197)||(15552483-15552596)
chr2 (38-201)||(28143416-28143577)
chr2 (40-200)||(31797166-31797324)
chr2 (38-201)||(20128123-20128285)
chr2 (38-199)||(4355755-4355915)
chr2 (38-201)||(14942230-14942394)
chr2 (38-207)||(15550665-15550834)
chr2 (38-201)||(62955-63117)
chr2 (39-201)||(38007948-38008110)
chr2 (146-201)||(25336093-25336148)
chr2 (38-199)||(42192240-42192400)
chr2 (38-201)||(44219642-44219804)
chr2 (38-198)||(16953320-16953479)
chr2 (146-216)||(24140167-24140237)
chr2 (146-200)||(42192736-42192790)
chr2 (146-200)||(43216202-43216256)
chr2 (146-199)||(6949937-6949990)
chr2 (38-201)||(11540024-11540186)
chr2 (133-196)||(3822924-3822987)
chr2 (38-100)||(33920710-33920772)
chr2 (38-202)||(43160006-43160170)
chr2 (146-200)||(32418158-32418212)
chr2 (38-75)||(4356142-4356179)
chr2 (38-75)||(4809002-4809039)
chr2 (38-75)||(5560936-5560973)
chr2 (38-75)||(13399545-13399582)
chr2 (39-75)||(43160397-43160433)
chr2 (148-200)||(44220140-44220192)
[»] chr1 (56 HSPs)
chr1 (13-200)||(39154379-39154566)
chr1 (13-198)||(5539817-5540002)
chr1 (13-201)||(50970276-50970464)
chr1 (13-208)||(8678532-8678727)
chr1 (13-208)||(17433574-17433769)
chr1 (13-200)||(18984478-18984665)
chr1 (13-197)||(21856044-21856228)
chr1 (13-199)||(29869978-29870164)
chr1 (13-191)||(33143925-33144103)
chr1 (13-201)||(15173453-15173640)
chr1 (13-198)||(4636330-4636515)
chr1 (13-202)||(15646189-15646378)
chr1 (38-199)||(29307326-29307487)
chr1 (26-199)||(26859059-26859232)
chr1 (15-198)||(5962579-5962762)
chr1 (38-201)||(9019347-9019510)
chr1 (38-200)||(50970663-50970824)
chr1 (38-201)||(18984117-18984279)
chr1 (38-200)||(5540203-5540364)
chr1 (38-200)||(15646580-15646741)
chr1 (13-199)||(17112282-17112467)
chr1 (38-200)||(29869619-29869780)
chr1 (38-199)||(29306953-29307113)
chr1 (38-197)||(33144304-33144462)
chr1 (38-199)||(8678927-8679086)
chr1 (38-199)||(21856428-21856588)
chr1 (38-196)||(15173099-15173256)
chr1 (38-196)||(5962963-5963120)
chr1 (49-201)||(9018971-9019122)
chr1 (38-199)||(17433216-17433376)
chr1 (38-201)||(26859445-26859606)
chr1 (216-312)||(45859703-45859799)
chr1 (83-200)||(52268289-52268406)
chr1 (38-197)||(39154021-39154179)
chr1 (83-202)||(52269177-52269296)
chr1 (113-201)||(2733416-2733504)
chr1 (124-197)||(47826966-47827039)
chr1 (99-191)||(47827033-47827125)
chr1 (38-201)||(44802557-44802719)
chr1 (38-201)||(17088526-17088687)
chr1 (38-139)||(4636033-4636132)
chr1 (19-201)||(45048504-45048683)
chr1 (118-199)||(50419725-50419806)
chr1 (146-200)||(29438929-29438983)
chr1 (38-106)||(17088243-17088310)
chr1 (138-201)||(52233736-52233799)
chr1 (138-200)||(39843509-39843571)
chr1 (38-100)||(45048253-45048314)
chr1 (38-75)||(8229763-8229800)
chr1 (38-75)||(8230027-8230064)
chr1 (38-75)||(17641750-17641787)
chr1 (38-75)||(34555766-34555803)
chr1 (38-75)||(44954349-44954386)
chr1 (38-75)||(44954612-44954649)
chr1 (148-197)||(50304441-50304490)
chr1 (148-196)||(17641864-17641912)
[»] scaffold0951 (2 HSPs)
scaffold0951 (15-201)||(2028-2214)
scaffold0951 (38-201)||(1665-1827)
[»] scaffold0417 (2 HSPs)
scaffold0417 (20-199)||(10989-11168)
scaffold0417 (38-180)||(10640-10781)
[»] scaffold0007 (5 HSPs)
scaffold0007 (13-196)||(64664-64847)
scaffold0007 (38-200)||(64301-64462)
scaffold0007 (38-197)||(205754-205911)
scaffold0007 (102-200)||(210786-210884)
scaffold0007 (38-111)||(205038-205110)
[»] scaffold1223 (2 HSPs)
scaffold1223 (38-199)||(1125-1286)
scaffold1223 (38-197)||(755-912)
[»] scaffold0295 (2 HSPs)
scaffold0295 (19-197)||(5160-5334)
scaffold0295 (38-201)||(4791-4953)
[»] scaffold0157 (2 HSPs)
scaffold0157 (13-182)||(16855-17024)
scaffold0157 (38-130)||(16565-16656)
[»] scaffold0273 (2 HSPs)
scaffold0273 (13-160)||(4242-4389)
scaffold0273 (38-201)||(4592-4754)
[»] scaffold0027 (2 HSPs)
scaffold0027 (38-196)||(42172-42330)
scaffold0027 (38-201)||(42544-42705)
[»] scaffold0019 (1 HSPs)
scaffold0019 (38-201)||(134058-134220)
[»] scaffold0432 (2 HSPs)
scaffold0432 (13-196)||(9935-10116)
scaffold0432 (83-196)||(10301-10414)
[»] scaffold0176 (2 HSPs)
scaffold0176 (38-217)||(18818-18994)
scaffold0176 (102-199)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (85-209)||(28674-28798)
[»] scaffold1585 (1 HSPs)
scaffold1585 (87-198)||(568-679)
[»] scaffold1696 (1 HSPs)
scaffold1696 (83-195)||(454-565)
[»] scaffold0076 (1 HSPs)
scaffold0076 (96-196)||(8451-8551)
[»] scaffold0057 (2 HSPs)
scaffold0057 (83-196)||(61887-62000)
scaffold0057 (125-201)||(61026-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (73-150)||(7707-7784)
[»] scaffold0712 (2 HSPs)
scaffold0712 (38-80)||(6777-6818)
scaffold0712 (39-130)||(6461-6551)
[»] scaffold0709 (2 HSPs)
scaffold0709 (38-80)||(6795-6836)
scaffold0709 (39-130)||(6479-6569)


Alignment Details
Target: chr7 (Bit Score: 173; Significance: 5e-93; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 19590884 - 19591072
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19590884 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 19590983  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19590984 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagccta 19591072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 38859000 - 38859188
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38859000 agcataggggcaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 38859099  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38859100 tggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 38859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 32004800 - 32004612
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32004800 agcataggggtaggtctaaaaccgcttaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataa 32004701  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32004700 ttgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 19830779 - 19830965
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  19830779 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataa 19830877  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  19830878 ttgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 35289089 - 35288903
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35289089 agcataggggtaggtctaaaaccgcttaaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataa 35288990  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  35288989 ttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 37787126 - 37787314
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37787126 agcataggggtaggtctaaaactgccaaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 37787225  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| ||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37787226 ttgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 37787314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 13 - 202
Target Start/End: Complemental strand, 2659025 - 2658836
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  2659025 agcataggtgtaggtctaaaacggcctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataa 2658926  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 202  Q
    |||||||||| ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2658925 ttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcctag 2658836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 34533977 - 34533789
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  34533977 agcataggggtaggtctaaaactgcctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataa 34533878  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| |||| |||| || ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34533877 ttgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 23952914 - 23952728
Alignment:
Q  16 ataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattg 115  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||    
T  23952914 ataggggtaggtttaaaactgcctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattg 23952815  T
Q  116 aaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagta-ggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  23952814 aaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagccta 23952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 4641803 - 4641983
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4641803 agcatagaggtatgtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataa 4641902  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||||||||||| |||||||||||| |||||||| |   |||||||||||||||||||||||||||||||||||||||    
T  4641903 ttgaaggaccgttttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 29100036 - 29099843
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| ||||||||||||||  |||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  29100036 agcatagaggtaggtctaaaacttcctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 29099937  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaa--gtgtaattaagcctagta 204  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||  |||| | |||||||||||    
T  29099936 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaaaggtgttaataagcctagta 29099843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 37786927 - 37786766
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37786927 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 37786829  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  37786828 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 19830580 - 19830418
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19830580 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19830482  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19830481 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 19590685 - 19590525
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||| |||| |||||  | ||||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19590685 ctaaaactgtcatttctctgggtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19590587  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19590586 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 32004999 - 32005159
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||    
T  32004999 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctatttt 32005097  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32005098 aaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 29100236 - 29100393
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  29100236 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 29100334  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  29100335 aaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 38858803 - 38858642
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  38858803 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 38858705  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  38858704 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 34534176 - 34534338
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||  ||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34534176 ctaaaactgtcatttctctgtttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 34534274  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||| |||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  34534275 aaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 35289286 - 35289448
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| | |||||||||||||| | |||  | ||||| ||  ||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  35289286 ctaaaactattatttctctgcgtttttagagaat-aaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 35289384  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35289385 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 4641600 - 4641443
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| |||||||||||| ||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  4641600 ctaaaactatcatttctctgcatttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtttc 4641502  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4641501 aaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 2659225 - 2659387
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  2659225 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2659323  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| ||||| |||| ||| ||||||||||| |||||||||||| ||||||||||||||    
T  2659324 aaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagccta 2659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 28583555 - 28583437
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  28583555 gtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaacacgaggacc 28583456  T
Q  183 aaaagtgtaattaagccta 201  Q
    |||||||||||||||||||    
T  28583455 aaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 38161077 - 38160949
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 172  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||||  | |||||||||||||||||||    
T  38161077 aaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaa 38160978  T
Q  173 cacgaggaccaaaagtgtaattaagccta 201  Q
    | |||||||||||||||||||||||||||    
T  38160977 cccgaggaccaaaagtgtaattaagccta 38160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 38 - 193
Target Start/End: Original strand, 23953114 - 23953268
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23953114 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23953212  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 193  Q
     ||||||| |||||| ||||||||||||  ||||||||||||||||||| ||||||    
T  23953213 gaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 4478085 - 4478247
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | |||  ||| | || |||||||||||||||||||||||||||||||||||  | || || ||||||    
T  4478085 ctaaaactgttatttctctgcgtttttggagaataaaatgaggga-taagacgaaaaatgcaacaaaaatgataattgaaggacaatgttattctgtttt 4478183  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  4478184 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 28584355 - 28584466
Alignment:
Q  87 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaa 186  Q
    |||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||| || |||||||||||||| ||||||||| ||||||||| ||||    
T  28584355 gacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaa 28584454  T
Q  187 gtgtaattaagc 198  Q
    ||||||||||||    
T  28584455 gtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 4477887 - 4477800
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaa 100  Q
    ||||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| |||||    
T  4477887 agcataggggtaggtctaaaactaccaaaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaa 4477800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 9181692 - 9181534
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||| || |||||| |||| ||||| |||||| ||| || ||||||  |||||||   |||    
T  9181692 ctaaaactgtcatttctgtgcgtttctggag-ttggaaatagggagataggactaaaactgcaaaaaaaat-atagtttaaggacgattttgttcgattt 9181595  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
     |||| |  ||||||| |||||||||| || |||||    |||||||||||||||||||||    
T  9181594 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 34595158 - 34595319
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||  |||| || |||| ||||| ||| |||||| || | ||||  |||||||  | ||    
T  34595158 ctaaaactgtcatttctgtgcgtttctggagtt-gaaaataagggggtagcactaaaactgcaa-aaacatgatagtttagggacgattttgttc-gatt 34595254  T
Q  137 taaaagg-gcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||  ||||||||| |||||||||| || |||||   |||||||||||||||||||||||||    
T  34595255 taaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 34595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 9393914 - 9393738
Alignment:
Q  19 ggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaag 118  Q
    |||||||||||| ||  || ||||||||||||||| ||| |||||||||| |||||||||||| ||||||| ||||  |||| ||| |||||| ||  ||    
T  9393914 ggggtaggtctataattgcttaaaactgtcatttcactgtgtttctggag-ttgaaaataggaggtaggactaaaacagcaaaaaacatgatagtt-tag 9393817  T
Q  119 gaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||| ||||||||   ||| |||  |||| ||| | |||||||||  |  |||||  |||||| ||||||||||||||||    
T  9393816 gacggttttgttcgatttgaaagaggcaagacaattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaag 9393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 35579058 - 35578902
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||||  |||| ||||| ||| |||||| ||  | ||| ||||||||   |||     
T  35579058 ctaaaaatgtcatttctctgcgtttctggag-ttgaaaataggatgtaggattaaaactgcaaaaaacatgatagtt-tatgacggttttgttcgatttg 35578961  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||  |||||||||| ||| |||||  || |||||  | | ||||||||||||||||||    
T  35578960 aaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 7732648 - 7732486
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||| ||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || ||||||  |||||||  | ||    
T  7732648 ctaaaactgtcatttatgtgcgtttatggagtt-gaaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc-gatt 7732552  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| || |||||||||||||||||| |  |||||  | |||||||||| ||||||||||||||    
T  7732551 taaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagccta 7732486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 26026478 - 26026320
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| || || ||| |||| ||||| ||||   ||| || | ||||  |||||||  | ||    
T  26026478 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgtt-cgatt 26026381  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||| || | |||||||||||||||  || ||||| || ||||||||||||||||||||    
T  26026380 taaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 27245364 - 27245203
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| |||||||| ||||||||||||||| ||||  ||||  |||||| |||| ||||| ||||   ||  ||   ||||  |||||||  | |||    
T  27245364 ctaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttc-gattt 27245266  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||| || |||||||||||||||||| || |||||  | |||||||||||||||||||||||    
T  27245265 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 27245203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 39137014 - 39137080
Alignment:
Q  135 tttaaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||| |||||||||| |||||||||  || ||||| ||||||| |||||||||||||||||||    
T  39137014 tttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcct 39137080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 26048439 - 26048492
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| || |||||| | |||| ||||||||||||||||||    
T  26048439 aggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagcc 26048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 48247977 - 48248140
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||| || | |||| |||| ||||| ||||   ||| || ||||||  |||||||   |||    
T  48247977 ctaaaactgtcatttctgtgcgtttctggag-ttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 48248075  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
     |||| |  ||||||| ||| |||||| || |||||    |||||||||||||||||||||||||    
T  48248076 aaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 48248140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 200
Target Start/End: Complemental strand, 49064171 - 49064033
Alignment:
Q  60 tttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgt 159  Q
    ||||||||||| ||||||||||  |||||| |||| ||||| ||| |||||| || | |||   ||||||| | ||| |||  ||||  |||| ||||||    
T  49064171 tttctggagtt-gaaaataggagttaggactaaaagtgcaa-aaacatgatagtttatggaagattttgttctatttgaaagaggcaataccattttcgt 49064074  T
Q  160 gagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||  || ||||| |||||||||||||||||||||||||||    
T  49064073 gagctggtcaaaatacgaggaccaaaagtgtaattaagcct 49064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 787279 - 787334
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||| |||||||||| || ||||| ||||| ||||||||||||||||| ||||    
T  787279 aggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaaccta 787334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 25637584 - 25637741
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| || |||||||||||| |||| |||| || |||||| |||| ||||| ||| || ||| || ||||||  |||||||   |||    
T  25637584 ctaaaactgtcatttctgtgtgtttctggagttggaaa-tagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 25637681  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
     |||| |  ||||||| |||||||||| || |||||    ||||||||||||||||||||    
T  25637682 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 28687885 - 28687947
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaa 100  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||| |||||| |||| |||||    
T  28687885 ctaaaactgtcatttctgtgcgtttctggag-ttggaaataggaagataggactaaaagtgcaa 28687947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 48247640 - 48247585
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| |  |||||  | |||||||||||||||||||||||||    
T  48247640 aggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 48247585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 26048108 - 26048071
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  26048108 ctaaaactgtcatttctgtgcgtttctggagttggaaa 26048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 32427406 - 32427461
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaa 94  Q
    ||||||||||||||||||||||||| | ||| |||||||||||| | ||||| ||||    
T  32427406 ctaaaactgtcatttctctgcgtttttagag-ttgaaaataggaggaaggactaaaa 32427461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 39388761 - 39388813
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    ||||| |||||||||||| || |||||  | ||||||||||||||||||||||    
T  39388761 aggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 39388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 22219712 - 22219900
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  22219712 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 22219811  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219812 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22219900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 11445346 - 11445534
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  11445346 agcataggggtgggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11445445  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11445446 ttgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11445534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 12935343 - 12935155
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12935343 agcataggggtatatctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12935244  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935243 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12935155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 20741460 - 20741650
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaa---atga 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||   ||||    
T  20741460 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatga 20741559  T
Q  110 taattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  20741560 taattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 23075487 - 23075675
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  23075487 agcataagggtaggtctaaaactgcctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 23075586  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23075587 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 18505105 - 18504922
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18505105 agcataggggtaggtctaaaatcgcctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataa 18505006  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18505005 ttgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 31470501 - 31470314
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  31470501 agcataggggtaggtctaaaatcgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataa 31470402  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||| ||| |||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31470401 ttgaatgactgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 10900100 - 10899942
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10900100 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 10900001  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  10900000 aaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 2319857 - 2319670
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||||| ||  ||||||||||||||||||||||||||||||    
T  2319857 agcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataa 2319759  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2319758 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccta 2319670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 18257496 - 18257682
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| ||||||| || ||||||||||||||| ||||||||| ||||    
T  18257496 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctacgtgtatggagttggaaaatatgaggtaggacgaaaaatgtaacaaaaataataa 18257595  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  18257596 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 15827819 - 15827639
Alignment:
Q  19 ggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaag 118  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  15827819 ggggtaagtctaaaaccgcctaaaa-tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaag 15827721  T
Q  119 gaccgt--tttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    ||||||  ||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  15827720 gaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 20741260 - 20741097
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  20741260 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggaccattttgttctgtttt 20741162  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 202  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20741161 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 20741097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 18257297 - 18257135
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18257297 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18257199  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18257198 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 10900315 - 10900475
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10900315 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 10900413  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  10900414 aaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 15828026 - 15828187
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15828026 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 15828124  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15828125 aaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 209
Target Start/End: Complemental strand, 11276753 - 11276580
Alignment:
Q  36 gcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtt 135  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  11276753 gcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttgttctgtt 11276654  T
Q  136 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattttt 209  Q
    ||||||||| |||| || |||| ||||||| |||||||||| |||| ||| ||||||||||||||  |||||||    
T  11276653 ttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagccttttattttt 11276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 11276967 - 11277127
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  11276967 ctaaaactgtcatttctcttcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgtttt 11277065  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  11277066 aaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 4811616 - 4811801
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||  ||||||| || ||||| ||||||||| ||| |||||||||||||| ||| || |||||||||||||||||||||||    
T  4811616 agcataggggtaggtctaaaactacctaaaattgccattt-tctgcgtttatggggtttgaaaataggaggtatgatgaaaaatgcaacaaaaatgataa 4811714  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||  ||| || || |||| |||||||||||||||||||||| ||||||| ||||||||||    
T  4811715 ttgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 31470701 - 31470860
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||| |||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31470701 ctaaaattgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 31470799  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||    
T  31470800 aaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 12935542 - 12935704
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||| |||| |||||  | ||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  12935542 ctaaaactgtcatttctctgtgtttatggagaat-aaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgttctgtttt 12935640  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    | || |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12935641 ataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 28472796 - 28472635
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  28472796 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 28472699  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  28472698 aaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 28472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 29859985 - 29859824
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  29859985 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 29859888  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  29859887 aaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 29859824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 39 - 198
Target Start/End: Original strand, 18505305 - 18505463
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttta 138  Q
    |||||||||||||||||| ||||  |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18505305 taaaactgtcatttctcttcgttgttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttatgtttta 18505403  T
Q  139 aaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||||| |||||||||    
T  18505404 aaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 11445147 - 11444985
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||| |||| | |||  | ||||| |   |||||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  11445147 ctaaaactgtcatttctctgtgtttttagagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttattctgtttt 11445049  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  11445048 aaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 1149816 - 1149977
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttct-ggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||||||||||| | ||||  | ||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||||| | |||    
T  1149816 ctaaaactgtcatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttctattt 1149914  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  1149915 taaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 2322604 - 2322760
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||| |||| |||||  | |||  |||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2322604 ctaaaactgtcatttctctgtgttt-tggagaataaaatgaggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 2322701  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||| |||| ||| | |||||||||||| ||||||||||| ||||||||||||||||||    
T  2322702 aaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 23074096 - 23073998
Alignment:
Q  102 aaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 29033550 - 29033436
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||| ||||  ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  29033550 gtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggacc 29033451  T
Q  183 aaaagtgtaattaag 197  Q
    |||||||||||||||    
T  29033450 aaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 29035069 - 29035180
Alignment:
Q  86 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaa 185  Q
    ||||||||||||||||||||||||||| | ||||||  ||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||| |||    
T  29035069 ggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaa 29035168  T
Q  186 agtgtaattaag 197  Q
    ||||||||||||    
T  29035169 agtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 1149553 - 1149463
Alignment:
Q  111 aattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 4811532 - 4811372
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||| ||||||||| || ||  | ||||| ||  ||| ||||||||||| ||||||||||||||||||||||||||||| || | ||||    
T  4811532 ctaaaactgttatttatctgcgtttttgaagaat-aaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatttt 4811434  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||| ||||| |||||||||||| |||||| ||  ||||||||||||||||||||||    
T  4811433 aaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 18296261 - 18296143
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||  | |||||| ||||||| | ||||||||||||||     
T  18296261 gtaggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgaggact 18296162  T
Q  183 aaaagtgtaattaagccta 201  Q
    |||| | ||||||||||||    
T  18296161 aaaattataattaagccta 18296143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 3835155 - 3835268
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||| ||||||||||||||| ||||||  ||||||| |||||||||  |||||||||| ||||||||||||| ||||||||  |||||    
T  3835155 gtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggacc 3835254  T
Q  183 aaaagtgtaattaa 196  Q
    ||||||||||||||    
T  3835255 aaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 35163570 - 35163734
Alignment:
Q  36 gcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttatgt 134  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||| ||||||| |||| ||||| |||||   ||| || | ||||  ||||||| ||     
T  35163570 gcctaaaactgtcatttctctgtgtttttggag-ttgaaaataggaggtaggactaaaactgcaaaaaaaacatatagtttagggacgattttgtt-tga 35163667  T
Q  135 tttaaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||| |||| ||||| |||| |||||||||  || |||||  || |||||||||||||||||||||||    
T  35163668 tttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagcct 35163734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 1149614 - 1149558
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagt 69  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||| |||||||||||    
T  1149614 agcataggggtaggtctaaaatcgcctaaaactgctatttctctgtgtttctggagt 1149558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  143 ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||| |||||||||| || ||||| ||||||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 32836179 - 32836114
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtag 86  Q
    ||||||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||| ||||    
T  32836179 gggtaggtctaaaattgtctaaaactgtcatttctctgtgtttcaggag-ttgaaaataggaggtag 32836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 201
Target Start/End: Original strand, 5120856 - 5121017
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||| ||||||| ||||||| |||| |||| || |||||| |||| ||||| ||| || ||| || | ||||  |||||||  | |||    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaa-tagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttc-gattt 5120952  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| || ||||  |||||||||||| || |||||  | |||||||||||||||||||||||||    
T  5120953 aaaagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 5121017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 28472997 - 28473041
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctg 57  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||    
T  28472997 agcatatgggtaggtctaaaaccccctaaaactgtcatttttctg 28473041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 31073528 - 31073688
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||| || |||||| |||| ||| ||||||   ||| || | ||||  |||||||  | ||    
T  31073528 ctaaaactgtcatttctgtgcgtttctggag-ttggaaatagggagataggactaaaactgc-acaaaacatatagtttagggacaattttgtt-cgatt 31073624  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||| || | |||||||||||||||  || |||||  | |||||||||||||||||||||||    
T  31073625 taaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 31073688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 28636582 - 28636619
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28636582 ctaaaactgtcatttctgtgcgtttctggagttggaaa 28636619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 31573885 - 31573848
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  31573885 ctaaaactgtcatttctatgcgtttctggagttggaaa 31573848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 25469010 - 25468943
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaa 106  Q
    |||||||||||||||| |||||||||||| ||| |||||||| || |||||| |||| ||||| |||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaattt-aaaatagggagataggactaaaactgcaagaaaaa 25468943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 30250774 - 30250722
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||||||||||||||| || |||||  | |||||||||| |||||||||||    
T  30250774 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagc 30250722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 31574224 - 31574272
Alignment:
Q  152 aatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||| || |||||  | ||||||||||||||||||||||||    
T  31574224 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 31574272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 5e-90; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 13224998 - 13225185
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13224998 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 13225097  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13225098 ttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 19176476 - 19176277
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19176476 agcatatgggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataa 19176377  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattttttgt 212  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  19176376 ttgaaggaccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatatttattgt 19176277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 44831433 - 44831246
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44831433 agcataggggcaggtctaaaaccgcctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 44831334  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44831333 tggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 41681493 - 41681679
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  41681493 agcataggggtaggtctaaaaccgcctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataa 41681592  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41681593 ttgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 9929095 - 9928912
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  9929095 agcataagggtaggtctaaaaccgcctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataa 9928996  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  9928995 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 11656816 - 11657003
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11656816 agcataggggtaggtctacaatcgcctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11656915  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||| ||||||| |||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11656916 ttgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 12572210 - 12572393
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12572210 agcataggggtagatctaaaaccgcctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12572309  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||||||||||| ||||||||||| ||| ||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  12572310 ttgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 31133579 - 31133764
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| | ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  31133579 agcatagagataggtctaaaaccgcataaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataa 31133678  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  31133679 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 33328499 - 33328683
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  33328499 agcataggggtaggtttaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataa 33328598  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||||||||||||||||||| ||| ||| | |||||||||||||| |||||||||||||||||||| ||||||||    
T  33328599 ttgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 33743107 - 33742920
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||    
T  33743107 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataa 33743008  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| ||||| |||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33743007 ttgaaagaccg-tttgttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 33742920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 34540934 - 34541095
Alignment:
Q  40 aaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaa 139  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  140 aagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 39 - 201
Target Start/End: Complemental strand, 41681292 - 41681132
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttta 138  Q
    |||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41681292 taaaactgtcatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 41681195  T
Q  139 aaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681194 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 19176675 - 19176837
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19176675 ctaaaactgtcatttgtctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176773  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  19176774 aaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 12572024 - 12571861
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagt-aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  || ||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  12572024 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttt 12571926  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12571925 taaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 31133380 - 31133218
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  31133380 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttgtttt 31133282  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31133281 aaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 31133218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 4629952 - 4629795
Alignment:
Q  44 ctgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagg 143  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  144 gcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| |||||||| || ||||||||||||| |  ||||||| |||||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 11656616 - 11656453
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttct-ggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||| ||||||||||||||| | ||||  | ||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||||  ||||    
T  11656616 ctaaaactgccatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttcagttt 11656518  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11656517 taaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 9930042 - 9930203
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| ||||||||||||| || |||||  | ||||| ||  ||||||||||||||||||||||||||||| |||||||||| ||||||| | ||||    
T  9930042 ctaaaactatcatttctctgcgcttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctatttt 9930140  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  9930141 aaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 33328318 - 33328161
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||| |||||  | ||||| |   ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  33328318 ctaaaactgtcatttctttgcgtttttggagaat-aaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 33328220  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||    
T  33328219 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 44831630 - 44831792
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||| |||| |||||  | ||||| ||  ||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||    
T  44831630 ctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgttctgtttt 44831728  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  44831729 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 44831792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 38 - 195
Target Start/End: Complemental strand, 13224800 - 13224645
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||| |||||||||||||||||||||||  |||||||| ||||||    
T  13224800 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggattgttttgttctgtttt 13224702  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 195  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  13224701 aaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 11336959 - 11337069
Alignment:
Q  91 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgt 190  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  191 aattaagccta 201  Q
    |||||||||||    
T  11337059 aattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 9178071 - 9178180
Alignment:
Q  90 gaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtg 189  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| || || ||||||||||||||||||||||||||||||||||||    
T  9178071 gaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtg 9178170  T
Q  190 taattaagcc 199  Q
    ||||||||||    
T  9178171 taattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 9177818 - 9177724
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| || ||| ||||||||||||||||||    
T  9177818 agcataggggtaggtctaaaaccgcctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 27003589 - 27003475
Alignment:
Q  200 tagtattttttgtctattctgcagtatcttgcatggtctctgaagcggagcaa------ggctgtgaataactgtaaaagggtggtaggtgtgattggaa 293  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||      |||||||||||||||||||||||    ||||||||||||||    
T  27003589 tagtattttttgtctgttctgcagtatcttgcatggtctctgaagcagagcaaggttgtggctgtgaataactgtaaaaggg----aggtgtgattggaa 27003494  T
Q  294 aaggccacatggatggtgt 312  Q
    |||||||||||||||||||    
T  27003493 aaggccacatggatggtgt 27003475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 4630177 - 4630328
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||  |||||| ||||||||||||||      |||||||||||||||| | || ||||||    
T  4630177 ctaaaactgtcatttttctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaa------taattgaaggaccgttgtattctgtttt 4630269  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||  |||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  4630270 aaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 33743304 - 33743418
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  33743304 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttctgtttt 33743402  T
Q  138 aaaagggcaggaccaa 153  Q
    |||| ||||| |||||    
T  33743403 aaaaaggcagaaccaa 33743418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 8073985 - 8074097
Alignment:
Q  87 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaa 186  Q
    |||| |||||||||||||| ||||||||||||||   ||||||| |||||||||||| || || || |||||||| ||||||||||||||||||||||||    
T  8073985 gacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaa 8074083  T
Q  187 gtgtaattaagcct 200  Q
    || ||| |||||||    
T  8074084 gtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 10918235 - 10918124
Alignment:
Q  90 gaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtg 189  Q
    |||||||||||||||||||||| |||||||||  ||||| | ||||||||   |||| ||||||||||||||||||  |||||||||||||| |||| ||    
T  10918235 gaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagtagatcaaaacacgaggacaaaaaatg 10918136  T
Q  190 taattaagccta 201  Q
    ||||||| ||||    
T  10918135 taattaaaccta 10918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 35427198 - 35427366
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||| ||||||| |||| |||| || | |||| |||| ||||| ||| || |||||| | ||||  |||||||  ||||    
T  35427198 ctaaaactgtcatttctgtgcgtttatggagttggaaa-tagggagatgggactaaaactgcaaaaaatat-ataatttagggacgattttgttcggttt 35427295  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattt 207  Q
     |||  || || |||| |||||||||| || |||||  ||||||||||||||||||||||||||| |||||    
T  35427296 aaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctaatattt 35427366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 28254812 - 28254971
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||||| |||| |||| || |||||| |||| ||||| ||  || ||| || | ||||  |||||||  | ||    
T  28254812 ctaaaactgtcatttctgtgcgtttctggagttggaaa-tagggagataggactaaaactgcaaaaattat-atagtttagggacgattttgttc-gatt 28254908  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||| || |||||||||||||||||| || |||||  | ||||||||||||||||||||||    
T  28254909 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 43958301 - 43958264
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaagga 120  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43958301 gtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  166 gccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 15255906 - 15255851
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| || |||||  | |||||||||||||||||||||||||    
T  15255906 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 15255851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 10919691 - 10919732
Alignment:
Q  159 tgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  10919691 tgagtaggtcaaaacacgaggaccaaaagtataattaagcct 10919732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 18805322 - 18805267
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaa 94  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| ||||||| ||||    
T  18805322 ctaaaactgtcatttctctgtgtttctggag-ttgaagataggaggtaggactaaaa 18805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 6115604 - 6115659
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||| |||| || ||||| || |||||||||||| ||||||||||||    
T  6115604 aggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaagccta 6115659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 43958257 - 43958211
Alignment:
Q  151 caatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||||  |||||||||| |||||||||| ||||||||    
T  43958257 caatttcgtgagtagatcaaaacacgaagaccaaaagtataattaag 43958211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 9796779 - 9796726
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||| |||||| || |||||  | |||||||||||||||||||||||    
T  9796779 aggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 9796726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 18049750 - 18049590
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||| ||||||||||||| ||| ||||||| || |||||| |||| ||||| ||||   ||| || ||||||  |||||||   |||     
T  18049750 taaaactgtcatttctgtgcgtttctggag-ttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 18049652  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||| |  || |||| |||||||||| || |||||    |||||||||||||||||| ||||    
T  18049651 aaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattgagcc 18049590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 599583 - 599531
Alignment:
Q  148 gaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||| || |||||  | |||||||||| |||||||||||||    
T  599583 gaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcct 599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 22434365 - 22434179
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  22434365 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataa 22434266  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22434265 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 46193591 - 46193405
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46193591 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 46193492  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193491 ttgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 45082783 - 45082969
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  45082783 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 45082882  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  45082883 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 15523421 - 15523233
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| ||||    
T  15523421 agcataggggtaggtctaaaaccgcataaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataa 15523322  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15523321 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 20470870 - 20471058
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20470870 agcataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 20470969  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| |||||||||||| ||||||||||||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  20470970 ttgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20471058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 23494802 - 23494990
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23494802 agcataggggtaggtctaaaaccgcctaaaattgccatttctttacgtttctggagtttgagaataggatgtaggacgaaaaatgcaacaaaaatgataa 23494901  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494902 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 51021155 - 51021342
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  51021155 agcataggggtaggtctaaaaccgcctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataa 51021253  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51021254 ttaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 11153332 - 11153145
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  11153332 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11153233  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||| || | ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  11153232 ttgaaggaccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 25447433 - 25447247
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25447433 agcatatgggtaggtctaaaactgcctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 25447334  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  25447333 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 12234688 - 12234874
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  12234688 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12234787  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12234788 ttgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 2118480 - 2118295
Alignment:
Q  13 agcataggg-gtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  2118480 agcatagggagtaggtctaaaaccgcctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 2118381  T
Q  112 attgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2118380 attgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 54995255 - 54995067
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54995255 agcataagggtaggtctaaaaccgcctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 54995156  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  54995155 ttgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 25938030 - 25938217
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| ||||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  25938030 agcatagaggtaggtctaaaaccgcataaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataa 25938129  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25938130 ttgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 48526545 - 48526723
Alignment:
Q  18 aggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaa 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  48526545 aggggtaggtctaaaaccgcctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaa 48526644  T
Q  118 ggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  48526645 ggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 4219918 - 4220106
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||    
T  4219918 agcataggggtgggtctaaaaccgcctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 4220017  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| |||| ||||||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4220018 ttgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 4220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 18751785 - 18751602
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  18751785 agcataggggtaagtctaaaaccgcctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatat 18751686  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  18751685 ttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 182
Target Start/End: Complemental strand, 12503622 - 12503453
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12503622 agcataggggtaggtctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12503523  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||  ||||||| |||||||||| ||| ||| || ||||||||||| | |||||||||||||||    
T  12503522 ttgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 201
Target Start/End: Original strand, 33109883 - 33110011
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  173 cacgaggaccaaaagtgtaattaagccta 201  Q
    || ||||||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 46193790 - 46193948
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||| |||||| ||||| |||||  | ||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  46193790 ctaaaactgtcaattctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgttctgtttt 46193888  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193889 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 25447621 - 25447784
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| |   ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  25447621 ctaaaactgtaatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 25447719  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 202  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25447720 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagcctag 25447784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 33109844 - 33109686
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33109844 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 33109746  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  33109745 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 11153532 - 11153692
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| |   |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  11153532 ctaaaactgttatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgttctgtttt 11153630  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11153631 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 25937830 - 25937668
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  25937830 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25937732  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  25937731 aaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagccta 25937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 4219716 - 4219559
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttta 138  Q
    |||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||    
T  4219716 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttttatttta 4219618  T
Q  139 aaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  4219617 aaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 39 - 201
Target Start/End: Complemental strand, 12234488 - 12234327
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttta 138  Q
    ||||||||| |||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  12234488 taaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 12234390  T
Q  139 aaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||    
T  12234389 aaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagccta 12234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 15523619 - 15523780
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  15523619 ctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttttgtttt 15523717  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  15523718 aaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 22170322 - 22170482
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  22170322 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttgtttt 22170420  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  22170421 aaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 23494603 - 23494445
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||| | |||||  | ||||| ||  |||||||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  23494603 ctaaaactgtcatttctctgcgtgtttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctgtttt 23494505  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  23494504 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 38962204 - 38962362
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| || ||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38962204 ctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 38962302  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||| |||||| |||||||| ||| |||||||||||||||||||| ||||||||||    
T  38962303 aaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 22434563 - 22434723
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||| |||||     
T  22434563 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttt- 22434659  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22434660 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaaccta 22434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 48526355 - 48526195
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||| ||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48526355 ctaaaactgtcatttctctgcatttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 48526258  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||  ||| |||| |||||||| ||||||||||| |||||||||||||||||||||    
T  48526257 aaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 51020957 - 51020795
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| || ||  | ||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  51020957 ctaaaactgtcatttctctacgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttt 51020859  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||| |||| |  ||||||||| ||||| ||||||||||||||||||||    
T  51020858 aaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagccta 51020795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 2118681 - 2118837
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| | |||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2118681 ctaaaactattatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtttt 2118778  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||  ||||||| |||| |||| |||||||||||||| ||||||||||||||||||    
T  2118779 aaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaa 184  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  185 aagtgtaattaag 197  Q
    |||||||||||||    
T  18764051 aagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 54995498 - 54995614
Alignment:
Q  84 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 183  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  54995498 taggacgaaaaatgcaacaaaa-tgatacttgaaggaccgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 54995596  T
Q  184 aaagtgtaattaagccta 201  Q
    ||||||||||||| ||||    
T  54995597 aaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 20958296 - 20958403
Alignment:
Q  91 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgt 190  Q
    |||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  20958296 aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgt 20958395  T
Q  191 aattaagc 198  Q
    ||||||||    
T  20958396 aattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 35363029 - 35363146
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt-aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggac 181  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||| |||| |||| |||||||||||||||||||||||||||     
T  35363029 gtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggat 35363128  T
Q  182 caaaagtgtaattaagcc 199  Q
    ||||||||||||||||||    
T  35363129 caaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 48293708 - 48293592
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaa 184  Q
    |||| ||||||||||||||||||||||||||||| ||  ||||||| |||||||||  | ||||| |||||||||||||| |||||||||||||||||||    
T  48293708 aggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaa 48293609  T
Q  185 aagtgtaattaagccta 201  Q
    |||||||||||||||||    
T  48293608 aagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 48708401 - 48708293
Alignment:
Q  93 aaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaa 192  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || |||||||  |||||||||||||  |||||||||||||||    
T  48708401 aaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaa 48708302  T
Q  193 ttaagccta 201  Q
    |||||||||    
T  48708301 ttaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 45082590 - 45082430
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||| ||||||||||||| |||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  45082590 ctaaaattgtcatttctctgtgtttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 45082493  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||  ||| | ||||||||||| ||||||||||| ||||||||| |||||||| ||||    
T  45082492 aaaagggcaaaacc-agttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaaaccta 45082430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 10258304 - 10258433
Alignment:
Q  71 tgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaa 170  Q
    ||||||||||  ||| ||| |||| ||||||||||||||||||||||  ||  ||||  | |||||||||||||||||||||||||| |||||||||||     
T  10258304 tgaaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccac 10258403  T
Q  171 aacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||||||||||||||||||    
T  10258404 aacacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 44892577 - 44892692
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    ||||||||||||||||||||||||  ||||||||| ||| |||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||||||    
T  44892577 gtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggacc 44892676  T
Q  183 aaaagtgtaattaagc 198  Q
    |||| | |||||||||    
T  44892677 aaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 35537648 - 35537762
Alignment:
Q  200 tagtattttttgtctattctgcagtatcttgcatggtctctgaagcggagcaa------ggctgtgaataactgtaaaagggtggtaggtgtgattggaa 293  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||      |||||||||||||||||||||||    ||||||||||||||    
T  35537648 tagtattttttgtctgttctgcagtatcttgcatggtctctgaagcagagcaaggttgtggctgtgaataactgtaaaaggg----aggtgtgattggaa 35537743  T
Q  294 aaggccacatggatggtgt 312  Q
    |||||||||||||||||||    
T  35537744 aaggccacatggatggtgt 35537762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 43243709 - 43243807
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggac 181  Q
    ||||||| |||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  43243709 gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 16691052 - 16690939
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||  |||||||||| ||||||||||||  |||||||| ||||||    
T  16691052 gtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaacacaaggacc 16690953  T
Q  183 aaaagtgtaattaa 196  Q
    |||| |||||||||    
T  16690952 aaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 48713777 - 48713893
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaa 184  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||| ||||| |||| ||||||||| |||||||||| |  ||    
T  48713777 aggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaa 48713876  T
Q  185 aagtgtaattaagccta 201  Q
    |||||||||||| ||||    
T  48713877 aagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 48294979 - 48295088
Alignment:
Q  90 gaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtg 189  Q
    |||||||||||||||||||||||||||| |||  ||||||| |||||||||  |||| ||||||||||||||||||  |||||||||| |||||||| ||    
T  48294979 gaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaaacacgatgaccaaaaatg 48295078  T
Q  190 taattaagcc 199  Q
    ||||||||||    
T  48295079 taattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 20957315 - 20957196
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 172  Q
    ||||| || |||| ||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| | | ||||| ||||||||||| |||||||    
T  20957315 aaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagtaagccaaaa 20957216  T
Q  173 cacgaggaccaaaagtgtaa 192  Q
    | |||||||||||| |||||    
T  20957215 ctcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 16691491 - 16691616
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 172  Q
    ||||| ||| ||| ||||||||||||||||||||| |||||| ||||||  ||||||||||||| || ||| |||||||| ||||||||||||| |||||    
T  16691491 aaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatgtttaaagagg-caggaccattttcgtgagtaggtcaaaa 16691589  T
Q  173 cacgaggaccaaaagtgtaattaagcc 199  Q
    |||  ||| ||||||||||||||||||    
T  16691590 cacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 43281220 - 43281317
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggac 181  Q
    ||||||||||||||||||||||||| |||||||||| ||  ||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  43281220 gtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 16318254 - 16318322
Alignment:
Q  132 tgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||    
T  16318254 tgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 90 - 198
Target Start/End: Complemental strand, 44890626 - 44890518
Alignment:
Q  90 gaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtg 189  Q
    |||||||||||||||||  |||||| |||||   ||||||| ||||||||||||||| ||||| |||||||| |||| |||||||| |||||||||| ||    
T  44890626 gaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattg 44890527  T
Q  190 taattaagc 198  Q
    |||||||||    
T  44890526 taattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 12503821 - 12503912
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 130  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  12503821 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt 12503912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 17504133 - 17503973
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||| ||||| ||| |||||| ||  ||||| ||| ||||   |||     
T  17504133 ctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacggttatgttccatttg 17504036  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||  |||||||||| |||||||||  || |||||  |||||||||| ||| |||||||||||    
T  17504035 aaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagcct 17503973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 43242396 - 43242328
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaa 141  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  43242396 aaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 46737041 - 46737204
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||||| || | ||||||| || ||| |||| ||||| ||| || ||| || | ||||  |||||||  | ||    
T  46737041 ctaaaactgtcatttctgtgcgtttctggagttggaga-taggaagatatgactaaaactgcaaaaaacat-atagtttagggacgattttgttc-gatt 46737137  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 202  Q
    |||||| || |||||||||||||||||| || |||||  | ||||||||||||||||||||||||||    
T  46737138 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctag 46737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 55189636 - 55189528
Alignment:
Q  91 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgt 190  Q
    ||||||| | ||||||||||||||||| |||  ||||||| | |||||||||||||  |||| |||  ||| |||| ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  191 aattaagcc 199  Q
    |||||||||    
T  55189536 aattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 40160465 - 40160633
Alignment:
Q  26 gtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 125  Q
    ||||||||| |||||||||||   ||||||| ||||||||||| |||||||||||| ||| ||| |||| ||||| ||| |||||| ||  ||||| |||    
T  40160465 gtctaaaactgcctaaaactgcattttctctacgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgatagtt-taggacggtt 40160562  T
Q  126 ttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||   ||| |||  |||| ||| | |||||||||| || |||||  | |||||||||| |||||||||    
T  40160563 ttgttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 40160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 55677451 - 55677505
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| || ||||| || ||||||||||||||||||||||||    
T  55677451 aggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcct 55677505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 12593409 - 12593571
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    |||||||||||||| || ||||||||||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || |  |||  |||||||  | ||    
T  12593409 ctaaaactgtcattcctgtgcgtttctggagtt-gaaaatagggagataggactaaaactgcaaaaaatat-atagtttacagacgattttgttc-gatt 12593505  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| || | |||||||||||||||| || |||||  | |||||||||||||||||||||||||    
T  12593506 taaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 12593571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 35193672 - 35193850
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaagg 119  Q
    ||||||||||  ||| || |||||||| |||| |||||||||||||||| |||||||||||| ||| ||| ||||   ||| ||| |||||| ||  |||    
T  35193672 gggtaggtctgtaactgcttaaaactgccatt-ctctgcgtttctggag-ttgaaaataggaggtatgactaaaacatcaaaaaacatgatagtt-tagg 35193768  T
Q  120 accgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    || |||||||||  ||| |||  |||||||||| |||||||||     |||||  | |||||||||||||||||||||||||    
T  35193769 acggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagccta 35193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 17504345 - 17504436
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 130  Q
    ||||||||||||||||||||||||||| |||||  ||||||||| |||| || |||| ||||| ||| || ||| || |||||| ||||||||    
T  17504345 ctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaaaaaacat-atagtttaaggacggttttgtt 17504436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 30597951 - 30598065
Alignment:
Q  84 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaaggg-caggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||| |||| |||||||||||| |||||| | ||||  |||||||  | |||||||| | ||| ||||||| ||||||| || |||||||||||||||    
T  30597951 taggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttc-gatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggacc 30598048  T
Q  183 aaaagtgtaattaagcc 199  Q
    ||||||||||| |||||    
T  30598049 aaaagtgtaatcaagcc 30598065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 12593184 - 12593023
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| || |||||  |||| ||||| ||| || ||| || ||||||  |||||||   |||    
T  12593184 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 12593087  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
     |||| || | ||||| |||||||||| || ||||     ||||||||||||||||||||||||    
T  12593086 aaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagcct 12593023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 14439988 - 14439831
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||| || |||||| |||| ||||| ||| || ||| || | ||||  |||||||   |||    
T  14439988 ctaaaactgtcatttctgtgcgtttctggag-ttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgtttaattt 14439891  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
     |||| || | |||||||||||||||| || |||||  | |||||||||| |||||||||    
T  14439890 aaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 44219428 - 44219377
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||||||| ||  |||| ||||||||||||||||||||||||    
T  44219428 aggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 10795692 - 10795730
Alignment:
Q  19 ggggtaggtctaaaaccgcctaaaactgtcatttctctg 57  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  10795692 ggggtaggtctaaaactgcctaaaactgtcatttctctg 10795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 34789542 - 34789382
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    |||||| |||||||| | |||||||||||||||||||| |||| || |||||| |||| ||||| ||| || ||| || ||||||  |||||||   |||    
T  34789542 ctaaaattgtcatttatgtgcgtttctggagtttgaaa-tagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 34789445  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
     |||| |  ||||||| |||||||||| || |||||    |||||||||||||||||||||||    
T  34789444 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 34789382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 35193467 - 35193406
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaa 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||  |||||| |||| |||||    
T  35193467 ctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggagataggactaaaactgcaa 35193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 45838933 - 45839092
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaa--tgataattgaaggaccgttttgttatgt 134  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||| |||||| |||| ||||| |||||    ||| || ||||||  |||||||   |    
T  45838933 ctaaaactgtcatttctgtgcgtttctggag-ttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 45839031  T
Q  135 tttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    || |||| |  |||||| ||||||||||| || ||||| |  ||||||||||||||||||||    
T  45839032 ttaaaaaagataggacc-atttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 19529030 - 19528867
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| |||||||| |||||| |||| |||| || |||||| |||| ||||| ||||   ||| || | ||||  |||| ||  | ||    
T  19529030 ctaaaactgtcatttctgtgcgtttccggagttggaaa-tagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattc-gatt 19528933  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| || |||||||||||||||| | || |||||  | |||||||||||||||||||||||||    
T  19528932 taaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagccta 19528867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 34789768 - 34789927
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||| ||||||| |||| |||| || |||||| |||| ||||| ||||   ||| || | ||||  |||||||  | ||    
T  34789768 ctaaaactgtcatttatgtgcgtttttggagttggaaa-tagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttc-gatt 34789865  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||| || |||||||||||||||||| || |||||  | |||||||||||||||||||||    
T  34789866 taaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 229321 - 229159
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    |||||||||||| || | ||||||| ||||||| ||||||| || ||||| || |||| ||||| ||| |||||| || ||||||  |||||||   |||    
T  229321 ctaaaactgtcacttttgtgcgtttatggagtt-gaaaataagggagtagaactaaaactgcaa-aaacatgatagtttaaggacgattttgttcaattt 229224  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
     |||  |||| ||||| ||||| |||  || ||||| ||||||||||||||||||||||| ||||    
T  229223 gaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaaaccta 229159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 229545 - 229702
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    |||||| ||||| |||| ||||||||||||||| ||||||| ||| ||||||  |||| ||||| ||| |||||| || ||||||  ||||||| || ||    
T  229545 ctaaaattgtcacttctgtgcgtttctggagtt-gaaaataaggaggtaggattaaaactgcaa-aaacatgatagtttaaggacgattttgtt-tgatt 229641  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    | |||| |||| ||||| |||||||||  || |||||  ||| ||||||||||||||||||    
T  229642 tgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 34807277 - 34807114
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||  |||||| |||| ||||| ||||   ||| || | ||||  |||||||  | |||    
T  34807277 ctaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttc-gattt 34807179  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| || | |||||||||||||||| |  |||||  | |||||||||||||||||||||||||    
T  34807178 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 34807114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 24336149 - 24336307
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||| ||| ||||||| | ||||||||||||| ||||||| |  ||||||| ||||  |||| ||| ||||||||| | | || ||||||||   |||     
T  24336149 ctaaagctgccatttctatacgtttctggagtt-gaaaatatggggtaggactaaaagagcaaaaaacatgataatttaggaacggttttgttcgatttg 24336247  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||  |||||||||| |||||||||   | |||||  |||||| ||||||||||||||||    
T  24336248 aaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 33689882 - 33689827
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||| |||||| || |||||  | |||||||||||||||||||||||||    
T  33689882 aggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 33689827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 41608908 - 41608963
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| || |||||    |||||||||||||||||||||||||    
T  41608908 aggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 41608963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 44220806 - 44220861
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttta 138  Q
    |||| |||||||||| |||||||||||||| ||||||||  ||||||| |||||||    
T  44220806 gtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 45838600 - 45838545
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| ||||||| || ||||| || |||||||||||||||| ||||||||    
T  45838600 aggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaaataagccta 45838545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 54440624 - 54440573
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||||||| || |||||  | |||||||||||||||||||||    
T  54440624 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 21034730 - 21034784
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| || |||||  | |||||||||| |||||||||||||    
T  21034730 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcct 21034784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 46736815 - 46736774
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 80  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  46736815 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 46736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 26974444 - 26974407
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  26974444 ctaaaactgtcatttctgtgcgtttctggagttggaaa 26974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 37727289 - 37727475
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37727289 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 37727388  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37727389 ttgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 25853420 - 25853234
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  25853420 agcatagggataggtctaaaaccgcctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 25853321  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853320 ttgaaggaccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 4275723 - 4275911
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4275723 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 4275822  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    || ||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275823 ttaaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 20 - 200
Target Start/End: Complemental strand, 39555757 - 39555577
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaagg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  39555757 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaagg 39555658  T
Q  120 accgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||| ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39555657 accattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 43973799 - 43973987
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  43973799 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 43973898  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973899 ttgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 43973987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 31778839 - 31778652
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31778839 agcatacgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 31778740  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
      |||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  31778739 acgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 17464677 - 17464489
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17464677 agcataggggtaggtctaacaccgcctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 17464578  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||    
T  17464577 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagccta 17464489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 26837538 - 26837358
Alignment:
Q  21 ggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaagga 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26837538 ggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga 26837439  T
Q  121 ccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||| ||||    
T  26837438 ccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 20840920 - 20841107
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20840920 agcataggggtatatctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 20841019  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20841020 ttgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 27393847 - 27393660
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  27393847 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataa 27393748  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| |||||||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  27393747 ttgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 5137340 - 5137528
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||    
T  5137340 agcatgggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataa 5137439  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| ||||||| | |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  5137440 ttgaaggaccattttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 5137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 22425000 - 22424812
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22425000 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 22424901  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| |||||||||||| ||| |||| |||||| |||||||  ||||||||| ||||||||||||||||||||||    
T  22424900 ttgaaggaccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagccta 22424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 29801775 - 29801963
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  29801775 agcatagaggtaggtctaaaaccgtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 29801874  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  29801875 ttgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagccta 29801963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 23644823 - 23645010
Alignment:
Q  13 agcataggggt-aggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||| ||||||||||||||||||||||    
T  23644823 agcataggggttaggtctaaaaccgcctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgata 23644922  T
Q  112 attgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23644923 attgaatgaccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 32535145 - 32534962
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  32535145 agcataggggaaggtataaaaccgcctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 32535046  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32535045 ttgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 30098121 - 30098309
Alignment:
Q  15 cataggggtaggt---ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    |||||||||||||   ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  30098121 cataggggtaggtgatctaaaaccgcctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 30098220  T
Q  112 attgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  30098221 attgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 24300742 - 24300560
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  24300742 agcatatgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataa 24300643  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||| |||||||| || |||||||||||| |||||||| |||||||| || |||||||||||| |||||||| |||||||||    
T  24300642 ttgaagaaccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 26274753 - 26274570
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||  ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  26274753 agcatagacgtaggtctaaaactgcctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataa 26274654  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| || |||| ||||| |||||||||    
T  26274653 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 41047060 - 41047239
Alignment:
Q  15 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataatt 114  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41047060 catatgggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 41047159  T
Q  115 gaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||| |||||| || |||||||||||| ||| |||| ||||||||||||||||||||| || || | |||||||||||||    
T  41047160 gaagga-cgttttattctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 5137140 - 5136978
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5137140 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 5137042  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  5137041 aaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 24300941 - 24301103
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  24300941 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttttgtttt 24301039  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24301040 aaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 24301103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 31779037 - 31779199
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||| ||||||||||||||| |||||  | ||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31779037 ctaaaactgacatttctctgcgtttttggagaat-aaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 31779135  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779136 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 39555962 - 39556122
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  39555962 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggaccattttgttctgtttt 39556060  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39556061 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 20840720 - 20840558
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||||||||  ||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  20840720 ctaaaactgtcatttctctgcgtttaaggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 20840622  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840621 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 37727089 - 37726928
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727089 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 37726991  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||| |||| |||||| || || ||||||||||||||||||||||||||||||||||    
T  37726990 aaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 23644622 - 23644461
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| | |||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  23644622 ctaaaactattatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttt 23644524  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23644523 aaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 41046860 - 41046703
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41046860 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41046762  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  41046761 aaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 43 - 201
Target Start/End: Complemental strand, 48453144 - 48452987
Alignment:
Q  43 actgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaag 142  Q
    |||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  48453144 actgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaat 48453046  T
Q  143 ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  48453045 ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagccta 48452987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 30104641 - 30104480
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| | ||   | ||||| ||  ||||||||||||||||||||||||||||||||||||||||||| | || ||||||    
T  30104641 ctaaaactgtcatttctctgcgtttttagataat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattttgtttt 30104544  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30104543 aaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 30104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 27393962 - 27394123
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  |||||| | ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  27393962 ctaaaactgttatttctctgcgtttttggagaat-aaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttt 27394060  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27394061 aaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 32535344 - 32535508
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaat-----gataattgaaggaccgttttgttat 132  Q
    |||||||| |||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||     ||||||||||||||||||||||| |    
T  32535344 ctaaaactatcatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatttaatgataattgaaggaccgttttgttct 32535441  T
Q  133 gttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32535442 gttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 43973601 - 43973441
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||| ||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43973601 ctaaaactgttatttatctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 43973503  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||  | || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  43973502 aaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 25612406 - 25612519
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25612406 gtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggacc 25612505  T
Q  183 aaaagtgtaattaa 196  Q
    ||||||||||||||    
T  25612506 aaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 29801468 - 29801356
Alignment:
Q  87 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaa 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||    
T  29801468 gacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgaccaaaa 29801369  T
Q  187 gtgtaattaagcc 199  Q
    |||||||||||||    
T  29801368 gtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 25853612 - 25853770
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  25853612 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 25853710  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||| | || ||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  25853711 aaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 26837741 - 26837902
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||| ||| |||||  | ||||| ||  ||||||| ||||||||||||||||||||| ||||| |||||||||||| | ||||    
T  26837741 ctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgttctatttt 26837839  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||| |||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  26837840 aaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26837902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 22425209 - 22425354
Alignment:
Q  49 atttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcagg 148  Q
    |||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |    
T  22425209 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatg 22425307  T
Q  149 accaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 195  Q
    ||||  |||||||||||||| ||||||||||||||||||||||||||    
T  22425308 accagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 51474763 - 51474881
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||    
T  51474763 gtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaacc 51474862  T
Q  183 aaaagtgtaattaagccta 201  Q
    |||||||||||||||||||    
T  51474863 aaaagtgtaattaagccta 51474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 17464876 - 17465038
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggac-gaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||||||| ||| |||||  | ||||| ||  |||||||  |||||||||||||||||||||||||||||||||||||||| | |||    
T  17464876 ctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattt 17464974  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||   ||||| |||| || ||||||||||||||||||||||||| |||||||||||||    
T  17464975 taaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 23228427 - 23228552
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 172  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||||||| || || |||||||||||||||||||    
T  23228427 aaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaa 23228525  T
Q  173 cacgaggaccaaaagtgtaattaagcc 199  Q
    |||| ||||||||||||||||||||||    
T  23228526 cacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 45966049 - 45965936
Alignment:
Q  88 acgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaag 187  Q
    ||||||||||||||| |||||||||| |||||||  ||||||||||||||||||| ||||||  || |||||||||| ||||||||||||||||||||||    
T  45966049 acgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaag 45965950  T
Q  188 tgtaattaagccta 201  Q
    ||||||||||||||    
T  45965949 tgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaa 184  Q
    ||||| |||| |||||||||||||||||  |||||||  ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  185 aagtgtaattaagc 198  Q
    ||||||||||||||    
T  51473442 aagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 50116838 - 50116954
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||||| | ||| ||||||||| ||||||||||||||||| | ||||||||||||| |    
T  50116838 gtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatc 50116937  T
Q  183 aaaagtgtaattaagcc 199  Q
    |||||||||||||||||    
T  50116938 aaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 26274952 - 26275113
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||||| || |||||  | ||||| ||  ||||||||||||| |||||||||||||||||||| |||||||||| || ||||||    
T  26274952 ctaaaactgtcatttctctgcggttttggagaat-aaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggaccgttttattctgtttt 26275049  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||| |||||| | ||||||| ||||    
T  26275050 aaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaaaccta 26275113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 32697129 - 32697244
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||  ||| |||||||||||||||| ||||||||||||||    
T  32697129 gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggacc 32697228  T
Q  183 aaaagtgtaattaagc 198  Q
    |||| | |||||||||    
T  32697229 aaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 37220673 - 37220555
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||| ||||||||||||||||| ||||||||  |||| || ||||||||||| ||| || | || | ||||||||||||||| |||||||||    
T  37220673 gtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggacc 37220574  T
Q  183 aaaagtgtaattaagccta 201  Q
    |||||||||||||||||||    
T  37220573 aaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 37222030 - 37222118
Alignment:
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||  |||||||| |||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 25420574 - 25420689
Alignment:
Q  87 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaa 186  Q
    ||||||||||||||||||||| |||||||||||||  |||| || | ||||||||||||  || |||||||||||||||| ||||| |||| || |||||    
T  25420574 gacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaatacgatgatcaaaa 25420673  T
Q  187 gtgtaattaagcctag 202  Q
    ||||||||||| ||||    
T  25420674 gtgtaattaagtctag 25420689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 25419242 - 25419145
Alignment:
Q  102 aaaaatgataattgaa-ggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||| || ||||||||||||| || ||||||||| |||||||||| |||| ||||    
T  25419242 aaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 18010176 - 18010271
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgagga 180  Q
    |||||||||||||||||||||||||||||||||  ||  ||||||| |||||||||||||| | |||| |||||||||||| | |||||| |||||    
T  18010176 aggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaaaacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 51828117 - 51827956
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||||||||||| ||||||||| || |||||| |||||||||| ||| || ||| || | ||||  |||||||  | ||    
T  51828117 ctaaaactgtcatttatgtgcgtttctggagtt-gaaaatagggagataggactaaaaatgcaaaaaacat-atagtttagggacgattttgttc-gatt 51828021  T
Q  137 taaaagggc-aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||| || |||||||||||||||||| || |||||  | ||||||||||||||||||||||||    
T  51828020 taaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51827956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 27200078 - 27200239
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||| ||| |||| ||||| ||| |||||| ||  ||||| || |||||   |||     
T  27200078 ctaaacctgtcatttctctgcgtttctggag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacggtattgttcgatttg 27200175  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||  ||||| |||| |||||||||  || |||||  | |||||||||||||||||||||||||    
T  27200176 aaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccta 27200239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 32695817 - 32695706
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaa 184  Q
    ||||| |||| |||||||||||| ||||| | |||||  ||||||| |||||||||| | ||  | ||||||||| |||||||||||| | |||||||||    
T  32695817 aggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaaatatgaggaccaa 32695718  T
Q  185 aagtgtaattaa 196  Q
    || |||||||||    
T  32695717 aaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 8873869 - 8873784
Alignment:
Q  19 ggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaa 105  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||| || |||||||||||| ||| ||| |||| ||||| ||||    
T  8873869 ggggtaggtccaaaattgcctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggaggtaagactaaaactgcaaaaaaa 8873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 22370757 - 22370599
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||| ||||||||||||||| || |  ||||  |||||| |||| ||||| ||||   ||| || | ||||  |||||||  ||||     
T  22370757 ctaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttta 22370658  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||| || ||||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  22370657 aaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 55192277 - 55192118
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| | ||| ||| || ||| || | |||| |||||||| || |||    
T  55192277 ctaaaactgtcatttctctgcgtttctggag-ttgaaaataggaggtaggactaaaactacaaaaaacat-atagtttatggacggttttgtt-tgattt 55192181  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
     |||| |||  ||||| |||||||||  || |||||  || |||| |||||||||||||||||    
T  55192180 gaaagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagcc 55192118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 2323553 - 2323466
Alignment:
Q  23 taggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    |||||||||||  ||||||||||||||||| || | |||||||||| |||||||||||| ||||||| |||| ||||| ||| ||||||    
T  2323553 taggtctaaaattgcctaaaactgtcatttatccgtgtttctggag-ttgaaaataggaggtaggactaaaattgcaaaaaacatgata 2323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 37075848 - 37075687
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaa--tgataattgaaggaccgttttgttatgtt 135  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| |||| ||||| |||||    ||| || | |||| | |||||| || |    
T  37075848 ctaaaacggtcatttctctgcgtttctggag-ttgaaaataagaggtaggactaaaactgcaaaaaaaaacatatagtttagggacgggtttgtt-tgat 37075751  T
Q  136 ttaaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    || |||| |||||||||| |||||||||| || |||||  ||  ||||||||||||||||||||    
T  37075750 ttgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 55389765 - 55389603
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||| || |||||| |||| ||||| ||| || ||| || ||||||  |||||||   |||    
T  55389765 ctaaaactgtcatttctgtgcgtttctggag-ttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 55389668  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
     |||| || ||||||| |||||||||| || | |||   |||||||||||||||||||| |||||    
T  55389667 aaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaattatgccta 55389603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 49407955 - 49407794
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||| |||||||||||||||||| ||||||| |||||||||| ||| ||| |||| || |  ||| || | | || | |||| |||||||| | |||     
T  49407955 ctaaaattgtcatttctctgcgtttttggagtt-gaaaataggaggtatgactaaaactgtacaaaacataa-agtttagggacggttttgttctatttg 49407858  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||  |||| ||||| |||||||||  || |||||  |||||||||||||||||||||||||||    
T  49407857 aaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagccta 49407794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 52375717 - 52375879
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||||||||||| ||||   || | || ||| |||| ||||| ||| || ||| || | ||||  |||||||   |||     
T  52375717 ctaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaacat-atagtttatggacgattttgttcaattta 52375815  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||  || ||||||| |||||||||| || |||||  |||||||||||||||||||||||||||    
T  52375816 aaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 52375879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 37076034 - 37076219
Alignment:
Q  13 agcatagggg-taggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    |||||||||| || ||||||||| ||||||||||| ||||||||| ||||||| |||||  ||||||| | ||| ||| ||||||| || ||| ||||||    
T  37076034 agcataggggataagtctaaaactgcctaaaactgccatttctctacgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgata 37076133  T
Q  112 attgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
     ||  |||||  |||||||   ||| |||  ||| |||||| |||||||||  |  |||||  |||||||||||| |||||||||||    
T  37076134 gtt-taggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaagc 37076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 49720531 - 49720367
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||| | ||||||||||||||| ||||  ||||  |||||| |||| ||||| |||  | ||| || | ||||  |||||||  | |||    
T  49720531 ctaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgt-atactttagggacgattttgttc-gattt 49720434  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagt 203  Q
    ||||| || |||||||||||||||||| || |||||  | |||| ||||||||||||||||||||||    
T  49720433 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctagt 49720367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 50900710 - 50900637
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaa 94  Q
    ||||||||||||||| |||||||||||||||||||||  |||||| ||| |||||||||| | ||||||| ||||    
T  50900710 gggtaggtctaaaactgcctaaaactgtcatttctctatgtttctagag-ttgaaaatagaaggtaggactaaaa 50900637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 52237203 - 52237361
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| |||||||| |||||| |||| |||| || |||||| |||| ||||| ||| || |||||| | ||||  |||||||  | ||    
T  52237203 ctaaaactgtcatttctgtgcgtttccggagttagaaa-tagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttc-gatt 52237299  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||| || ||||||| |||||||||| || |||||   ||||||||||||||||||||||    
T  52237300 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 36701482 - 36701640
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||| ||||||| || |||||||||| |||||||||||| ||| ||| |||| ||||| ||| |||||| || | |||   |||||||   |||     
T  36701482 ctaaaactgccatttctatgtgtttctggag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagggatgattttgttcgatttg 36701580  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||  | || ||||| |||||||||  || |||||  |||||||||||||||||||||||    
T  36701581 aaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 200
Target Start/End: Original strand, 330223 - 330383
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||| ||||||||| ||||| |||| |||| || || ||| |||| ||||| ||| || ||| || | ||||  |||||||   |||     
T  330223 taaaactgtcatttctgtgcgtttctagagttggaaa-tagggagatatgactaaaactgcaaaaaacat-atagtttagggacgattttgtttgattta 330320  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||| || ||||||| |||||||||| || |||||  ||||||||||| ||||||||||||||    
T  330321 aaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagcct 330383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 32730775 - 32730812
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32730775 ctaaaactgtcatttctgtgcgtttctggagtttgaaa 32730812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 47431857 - 47431694
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||||| | ||||||| || |||||| |||| ||||| ||||   ||| || || |||  |||||||  | ||    
T  47431857 ctaaaactgtcatttctgtgcgtttctggagttag-aaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgtt-cgatt 47431760  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| || | ||||| |||||||||| || |||||    |||||||||||||||||||||||||    
T  47431759 taaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 47431694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 23227370 - 23227261
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaa 184  Q
    ||||||||||||||||||||||||| ||||| |||||   |||||| ||||| |       ||||||| ||||||||||| ||||||||||   ||||||    
T  23227370 aggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtttca------gaggaccattttcgtgagtaagccaaaacacagagaccaa 23227277  T
Q  185 aagtgtaattaagcct 200  Q
    |||| ||||| |||||    
T  23227276 aagtctaattgagcct 23227261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 40275255 - 40275093
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatg-ataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||  |||||| |||| ||||| |||||   | | || | ||||  |||||||  | ||    
T  40275255 ctaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttc-gatt 40275157  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||| || ||||||| |||||||||| || |||||   ||||||||||||||||||||||||    
T  40275156 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 40275093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 50662798 - 50662860
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaa 100  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| || |||||| |||| |||||    
T  50662798 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggagctaggactaaaactgcaa 50662860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 14654686 - 14654736
Alignment:
Q  150 ccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||| || |||||  | ||||||||||||||||||||||||    
T  14654686 ccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 14654736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 40838812 - 40838638
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||  | || ||| |||| ||||| ||| || ||| || | ||||  ||||||| || ||    
T  40838812 ctaaaactgtcatttctgtgcgtttctggag-ttggaaatagggggatatgactaaaactgcaaaaaacat-atagtttatggacgattttgtt-tgatt 40838716  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattttttgtct 214  Q
    |||||| || | ||||| |||||||||| || |||||  |||||| ||||||||||||||| |||| | ||||||||||    
T  40838715 taaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaaaccta-ttttttttgtct 40838638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 41998721 - 41998775
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||| ||| || |||||  | ||||||||||||||||||||||||    
T  41998721 aggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 41998775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 52236976 - 52236935
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 80  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  52236976 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 52236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 40839038 - 40839075
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  40839038 ctaaaactgtcatttctgtgcgtttctggagttagaaa 40839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 51828343 - 51828380
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  51828343 ctaaaactgtcatttctatgcgtttctggagttggaaa 51828380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 52375487 - 52375450
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  52375487 ctaaaactgtcatttctatgcgtttctggagttagaaa 52375450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 8874072 - 8874138
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaa 106  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||| || |||| ||||| |||||    
T  8874072 ctaaaactgtcatttct-tgcgtttctggag-ttgaaaatagaaggtagaactaaaactgcaaaaaaaa 8874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 25611529 - 25611497
Alignment:
Q  168 caaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||| |||||||||||||||||||    
T  25611529 caaaacacgaggatcaaaagtgtaattaagcct 25611497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 46013473 - 46013421
Alignment:
Q  148 gaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||| || |||||  | |||| |||||||||||||||||||    
T  46013473 gaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 46013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 49720856 - 49720908
Alignment:
Q  148 gaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||| |||||||||| || ||||| |  ||||||||||||||||||||||||    
T  49720856 gaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcct 49720908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 3e-88; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 5819115 - 5818927
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  5819115 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataa 5819016  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5819015 ttgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 19359495 - 19359683
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  19359495 agcataggggtaggtctaaaaccgcctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataa 19359594  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359595 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 2864940 - 2864756
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2864940 agcataggggtagttctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 2864841  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2864840 ttgaaggaccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 8647797 - 8647985
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  8647797 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataa 8647896  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647897 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 8647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 8461290 - 8461477
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  8461290 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataa 8461389  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  8461390 ttgaaggaccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 24331747 - 24331557
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaa--tgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||   |||    
T  24331747 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagat 24331648  T
Q  111 aattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  24331647 aattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagccta 24331557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 29454926 - 29454739
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  29454926 agcatatgggtaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataa 29454827  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  29454826 ttcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 164376 - 164191
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  164376 agcataggggtaggtctaaaaccgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 164278  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||| |||||||||||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  164277 ttgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 14215425 - 14215243
Alignment:
Q  15 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  14215425 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataact 14215326  T
Q  115 gaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||| ||||||| ||||||||||||| |  |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  14215325 gaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 18183156 - 18182968
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||||||||||    
T  18183156 agcataggggtaggcctaaaactgcctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 18183057  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  18183056 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 25000448 - 25000635
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||    
T  25000448 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 25000547  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||| |||| ||||||| |||||||||||  || ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  25000548 ttgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 16018946 - 16019134
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  16018946 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataa 16019045  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| ||| |||| || | ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  16019046 ttgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 15372060 - 15371873
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaa----aactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatg 108  Q
    ||||||| |||||||||||||||||||||    |||| |||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||    
T  15372060 agcatagaggtaggtctaaaaccgcctaattaaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatg 15371961  T
Q  109 ataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||||    
T  15371960 ataattgaaggaccattttgttctgttttaaaagggcaggaccaa-ttcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 15709335 - 15709513
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaagg 119  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||    
T  15709335 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaagg 15709434  T
Q  120 accgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||| |||||| |||||||| ||| | |||| ||||||||||||||||| | |||||||||||||||||||||    
T  15709435 accgttttgttctgtttt-aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 2865140 - 2865302
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| |||||  | ||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  2865140 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgttctgtttt 2865238  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865239 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 18183354 - 18183516
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | |||  |||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18183354 ctaaaactgttatttctctgcgtttttggagaataaaatgaggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183452  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183453 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18183516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 5819314 - 5819474
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  5819314 ctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 5819412  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5819413 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 8647598 - 8647438
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  8647598 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 8647500  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8647499 aaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 24362221 - 24362383
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||| || ||||||    
T  24362221 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttattctgtttt 24362319  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24362320 aaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 199
Target Start/End: Complemental strand, 19359292 - 19359136
Alignment:
Q  42 aactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaa 141  Q
    ||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19359292 aactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaa 19359194  T
Q  142 gggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  19359193 gggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 15372258 - 15372420
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| ||||   | ||||| ||| |||| || ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  15372258 ctaaaactgtcatttctctgcgtttttggaaaat-aaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 15372356  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15372357 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 15372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 29455127 - 29455288
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  29455127 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 29455225  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  29455226 aaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 24362022 - 24361843
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||     
T  24362022 agcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatac 24361924  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 193  Q
    |||||||||| ||||||| ||||||| ||||||| || || ||||||| ||||||||||||| | ||||||||||||||||    
T  24361923 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 15709130 - 15708969
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  15709130 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 15709033  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  15709032 aaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagccta 15708969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 8461090 - 8460928
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||| ||| |||||  | ||||| ||  ||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  8461090 ctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 8460992  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  8460991 aaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 24325397 - 24325218
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||  | ||||| ||  |||||||||||||||| ||||||||||||     
T  24325397 agcataggggtaggtctaaaaccggctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcgacaaaaatgatac 24325299  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 193  Q
    |||||||||| ||||||| ||||||| ||||||| || || ||||||| ||||||||||||| | ||||||||||||||||    
T  24325298 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 14215628 - 14215790
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| |||||  | ||||| ||   || ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  14215628 ctaaaactgtcatttctctacgtttttggagaat-aaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 14215726  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  14215727 aaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagccta 14215790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 14463906 - 14464069
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||| | ||  |||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||    
T  14463906 ctaaaactgtcatttctctgcgtttttggagaataaaattggg--gtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttctatttt 14464003  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagt 203  Q
    |||||| ||  |  | |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14464004 aaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagcctagt 14464069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 7349446 - 7349562
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||| ||||| ||||||||||||||||| |||||||  |||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  7349446 gtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggacc 7349545  T
Q  183 aaaagtgtaattaagcc 199  Q
    |||||||||||||||||    
T  7349546 aaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 164576 - 164738
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| | ||| |||||  | ||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  164576 ctaaaactgtcatttctctacatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 164674  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| ||||| ||| |||||| |||||||||| ||||| ||||| | ||||||||||||    
T  164675 aaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagccta 164738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 16018704 - 16018588
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||| | ||||||||||||| || ||||||||||| ||||||||||||||| ||||    
T  16018704 gtaggacggaaaatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagacc 16018606  T
Q  183 aaaagtgtaattaagcct 200  Q
    ||||||||||||||||||    
T  16018605 aaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 4222151 - 4222266
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||| ||||||||||| |||| |||  ||||||| ||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  4222151 gtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggacc 4222250  T
Q  183 aaaagtgtaattaagc 198  Q
    ||||||||||||||||    
T  4222251 aaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 4623264 - 4623148
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||| ||||||| | ||||||||||||||||||||  ||||||| |||||||||  |||||||||||||||||||||| | |||||||||| ||||    
T  4623264 gtaggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgacc 4623165  T
Q  183 aaaagtgtaattaagcc 199  Q
    |||||||||||||||||    
T  4623164 aaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 7348675 - 7348559
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||| |||||||||||||||||  ||||||  |||||||| ||||||||||||||| |||||||||||||||||| | |||||| |||||||    
T  7348675 gtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggacc 7348576  T
Q  183 aaaagtgtaattaagcc 199  Q
    |||| ||||||||||||    
T  7348575 aaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 25000250 - 25000112
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| |||||  | ||||| ||  ||||||| |||||||||| ||||||||||||| ||||||| |||| || ||||||    
T  25000250 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggaccattttattctgtttt 25000152  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacga 177  Q
    || |||||| |||||| |||||||||||||||||||||||    
T  25000151 aacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 24331945 - 24332107
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaa-tgcaacaaaa-atgataattgaaggaccgttttgttatgtt 135  Q
    ||||||||||||||||||||||||| |||||  | | ||| ||  ||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||    
T  24331945 ctaaaactgtcatttctctgcgtttttggagaat-agaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcaggaccgttttgttctgtt 24332043  T
Q  136 tt-aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc-aaaagtgtaattaag 197  Q
    || |||| ||||||| || ||||||||||| ||||||||| || |||| |||||||||||||||    
T  24332044 ttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 4219779 - 4219663
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||| | ||||||   |||||| |||||||||| |||| ||||| ||| || | ||| |||||||||||||| |    
T  4219779 gtaggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggatc 4219680  T
Q  183 aaaagtgtaattaagcc 199  Q
    |||||||||||||||||    
T  4219679 aaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 4624654 - 4624757
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||  | || |||||||||||||||||||  |||||||||||||     
T  4624654 gtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaaaacacgaggacg 4624753  T
Q  183 aaaa 186  Q
    ||||    
T  4624754 aaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 10721967 - 10721873
Alignment:
Q  16 ataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||| ||||| ||| ||||||    
T  10721967 ataggggtaggtctaaaactgcctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 10721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 14462770 - 14462686
Alignment:
Q  37 cctaaaactgtcatttctctgcgtttctg----gagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaa 117  Q
    |||||||||||||||||||| ||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14462770 cctaaaactgtcatttctctacgtttctgtctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 6018429 - 6018315
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    ||||||| |||| ||||||||||||||||||||||| |   ||||||| |||||||||||| || ||||| ||||||||||||  ||||||||||| |||    
T  6018429 gtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaacc 6018331  T
Q  183 aaaagtgtaattaagc 198  Q
    |||| |||||||||||    
T  6018330 aaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 200
Target Start/End: Original strand, 41834430 - 41834606
Alignment:
Q  23 taggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaa-atgataattgaaggac 121  Q
    |||||||||||  | ||||||||||||||||||||||||||  ||| |||||||||||| ||||||| |||| ||||| |||| |||||| ||  |||||    
T  41834430 taggtctaaaattgtctaaaactgtcatttctctgcgtttcaagag-ttgaaaataggaggtaggactaaaactgcaaaaaaacatgatagtt-taggac 41834527  T
Q  122 cgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
     ||||||||   | | |||  |||||||||| |||||||||  || |||||  ||||||||||||||||||||||||||    
T  41834528 ggttttgttcgatctgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcct 41834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 6019189 - 6019309
Alignment:
Q  73 aaaataggaagtaggacgaaaa-atgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaa 171  Q
    ||||| ||| |||||||||||| |||||||||||||||||||| || ||| |||||||| ||||||||||| ||| || || ||||||||||| ||||||    
T  6019189 aaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgtgagta-gccaaa 6019287  T
Q  172 acacgaggaccaaaagtgtaat 193  Q
    ||| || |||||||| ||||||    
T  6019288 acatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 27307238 - 27307148
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||| |||| ||||| ||| ||||||    
T  27307238 gggtaggtctaaaactgcctaaaactgtcatttctatgcgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgata 27307148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 28495029 - 28494931
Alignment:
Q  13 agcatagg-ggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    |||||||| ||||||||||||||  ||||||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||| ||||| ||| ||||||    
T  28495029 agcataggtggtaggtctaaaactacctaaaattgtcacttctctgcgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 28494931  T

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Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 28290030 - 28290192
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||||| |||| |||| || |||||| |||| ||||| ||| || ||| || ||||||  |||||||   |||    
T  28290030 ctaaaactgtcatttctgtgcgtttctggagttggaaa-tagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 28290127  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
     |||| |  ||||||| |||||||||| || |||||    |||||||||||||||||||||||||    
T  28290128 aaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 28290192  T

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Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 22651505 - 22651347
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaat-aggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||| ||||| | ||||||||||||| |||||||| |||| ||||||| |||| ||||| ||| |||||| || |||||  |||||||| || ||    
T  22651505 ctaaaactgccatttttgtgcgtttctggag-ttgaaaataaggaggtaggactaaaactgcaa-aaacatgatagtttaaggatggttttgtt-tgatt 22651409  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||| |||| ||||| || ||||||  || ||||| ||||| ||||||| ||||||||||    
T  22651408 taaaagaggcatgaccatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaag 22651347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 15029695 - 15029857
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||||||||||||| ||||||| || | | || |||| ||||| ||| || ||| || ||||||  |||||||   |||    
T  15029695 ctaaaactgtcatttatgtgcgtttctggagtttg-aaatagggagatcgaactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 15029792  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
     |||| || | ||||| |||||||||| || |||||   ||||||||||||||||||||||||||    
T  15029793 aaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagccta 15029857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 16752938 - 16753114
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaa--atgataattgaa 117  Q
    ||||||||||||| | ||||||||||| ||||| ||||||||||||||| ||||||||||||  |||| | |||| ||||| ||||  |||||||||  |    
T  16752938 gggtaggtctaaa-ctgcctaaaactgccatttttctgcgtttctggag-ttgaaaataggagttaggtctaaaactgcaaaaaaaacatgataatt-ta 16753034  T
Q  118 ggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||  |||| |||   ||| |||  ||||| |||| |||||||||| || |||||  ||| |||||||| ||||||||||    
T  16753035 ggatggtttcgttcgatttgaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaag 16753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 28495227 - 28495288
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaa 100  Q
    |||||||| ||||||||||||| |||||||| |||||||||||| ||||||| |||| |||||    
T  28495227 ctaaaactatcatttctctgcggttctggag-ttgaaaataggaggtaggactaaaactgcaa 28495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 32305977 - 32305916
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaa 100  Q
    |||||||||||||||||||| |||||||||| ||||||||| || ||||||| |||| |||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataagaggtaggactaaaactgcaa 32305916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 21371082 - 21371244
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||||||||||| |||| |||| || |||||| |||| ||||| ||| || ||| || | ||||  ||||||| || ||    
T  21371082 ctaaaactgtcatttatgtgcgtttctggagttggaaa-tagggagataggactaaaattgcaaaaaacat-atagtttagggacgattttgtt-tgatt 21371178  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| || |||||||||||  ||||| || |||||  | |||| ||||||||||||||||||||    
T  21371179 taaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagccta 21371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 27307444 - 27307499
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaa 94  Q
    |||||| |||||||||||||| ||||||||| |||||||||||| ||||||| ||||    
T  27307444 ctaaaaatgtcatttctctgcatttctggag-ttgaaaataggaggtaggactaaaa 27307499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 28289844 - 28289683
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||| || |||||| |||| || || ||| || |||||| | ||||  |||||||  | ||    
T  28289844 ctaaaactgtcatttctgtgcgtttctggag-ttggaaatagggagataggactaaaactggaaaaaacat-ataatttagggacgattttgtt-cgatt 28289748  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||| || | ||| |||||||||||| || |||||  | |||| |||||||||||||||||||    
T  28289747 taaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 28289683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 14463763 - 14463732
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaac 44  Q
    ||||||||||||||||||||||||||||||||    
T  14463763 agcataggggtaggtctaaaaccgcctaaaac 14463732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 13557176 - 13557079
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    ||||||| |||||||||||||| || | ||| ||  ||||||||||||||||| || || |||||| || ||||||| |||| ||||| ||| ||||||    
T  13557176 agcatagaggtaggtctaaaacggcatcaaattgcaatttctctgcgtttctgcag-ttcaaaataagatgtaggactaaaactgcaaaaaacatgata 13557079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 13814156 - 13814190
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaa 117  Q
    |||||||||||| ||||||||||||||||||||||    
T  13814156 gtaggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 18150217 - 18150274
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagt 203  Q
    ||||||||||||||||||  | ||||| || |||| || |||||||||||||||||||    
T  18150217 aggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaagcctagt 18150274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 32697719 - 32697780
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattt 207  Q
    |||||||||||||||||| || |||||  | | |||||||||||||||||||| || |||||    
T  32697719 aggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagcatactattt 32697780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 22651796 - 22651860
Alignment:
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 202  Q
    |||| ||||| |||| |||||||||  || |||||  ||||||| ||||||||||||||||||||    
T  22651796 aaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagcctag 22651860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 3e-88; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 22374684 - 22374872
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  22374684 agcataggggaaggtctaaaaccgcctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 22374783  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374784 ttgaaggaccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 40815531 - 40815347
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  40815531 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 40815432  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40815431 ttgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 18451016 - 18450829
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  18451016 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataa 18450917  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18450916 ttgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 40027501 - 40027682
Alignment:
Q  15 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataatt 114  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40027501 catatgggtaggtctaaaaccgcctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 40027600  T
Q  115 gaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027601 gaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 43058692 - 43058879
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  43058692 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 43058790  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43058791 ttgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 43058879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 239711 - 239896
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  239711 agcatagagttaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataa 239810  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  239811 ttgaaggaccattttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 7446704 - 7446893
Alignment:
Q  12 aagcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  7446704 aagcatatgagtaggtctaaaaccgcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 7446803  T
Q  112 attgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||||||||||| ||||| ||||||||||||||    
T  7446804 attgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagccta 7446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 11090879 - 11091067
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||    
T  11090879 agcatatgggtaggtctaaaaccgcctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataa 11090978  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090979 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 28616973 - 28617160
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  28616973 agcataggggtaggtctaaaatcgcctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataa 28617072  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||| ||||||| |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28617073 ttgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 1978468 - 1978656
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| ||||||||||||||||| |||||||| ||||||| || |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  1978468 agcatagaggtaggtctaaaaccgcataaaactgccatttctttgtgtttctagagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataa 1978567  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1978568 ttgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 3025822 - 3026006
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  3025822 agcatatgggtaggtctaaacccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataa 3025921  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3025922 ttgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 26538463 - 26538626
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26538463 ctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26538562  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538563 aagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 8425533 - 8425358
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaagg 119  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |    
T  8425533 gggtaggtctaaaaccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-g 8425435  T
Q  120 accgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||||| |||||||||| || | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8425434 accgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 14432500 - 14432684
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||||    
T  14432500 agcataagggtaggtctaaattcgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataa 14432599  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||| ||| |||| || |||||||||| |||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||    
T  14432600 ttgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 11090681 - 11090519
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11090681 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11090583  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11090582 aaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 239512 - 239351
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  239512 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 239414  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  239413 aaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccta 239351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 22374480 - 22374318
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| |||||||| ||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22374480 ctaaaactatcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374382  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374381 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 40815730 - 40815892
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  40815730 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgttctgtttt 40815828  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40815829 aaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 40815892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 40027300 - 40027139
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| |   ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40027300 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 40027202  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  40027201 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 1978268 - 1978104
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  1978268 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 1978170  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagt 203  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1978169 aaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagcctagt 1978104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 18451216 - 18451378
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||| |||||||||||||||||||||| |||||||||  ||||||| ||||||    
T  18451216 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggactattttgttctgtttt 18451314  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  18451315 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18451378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 14432302 - 14432145
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  14432302 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgttatatttt 14432204  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14432203 aaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 26538257 - 26538096
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| ||||||||| |||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  26538257 ctaaaactgttatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctgtttt 26538159  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  26538158 aaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 28616729 - 28616613
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  28616729 gtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 28616630  T
Q  183 aaaagtgtaattaagcc 199  Q
    |||||||||||||||||    
T  28616629 aaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 8425745 - 8425902
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||| ||||||||||||||||||||||||||||||||||| |||||||| | ||||    
T  8425745 ctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgttctatttt 8425843  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||    
T  8425844 aaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 28847124 - 28847242
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  28847124 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggacc 28847223  T
Q  183 aaaagtgtaattaagccta 201  Q
    |||| ||||||||||||||    
T  28847224 aaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 20444865 - 20444748
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  20444865 gtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacc 20444766  T
Q  183 aaaagtgtaattaagcct 200  Q
    ||||||||||||||||||    
T  20444765 aaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 43058493 - 43058333
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||| ||||| |||||  | ||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43058493 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 43058395  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||| |||||||||| ||| |||||| |||||||||||||||| ||||||||||||||||||    
T  43058394 aaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 7446497 - 7446341
Alignment:
Q  42 aactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaa 141  Q
    ||||||||||||||||||||| |||||  | ||||| ||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  7446497 aactgtcatttctctgcgtttttggagaat-aaaatgggg-gtatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaa 7446400  T
Q  142 gggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  7446399 gggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 20440461 - 20440578
Alignment:
Q  84 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 183  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  20440461 taggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacca 20440560  T
Q  184 aaagtgtaattaagccta 201  Q
    ||||||||||||||||||    
T  20440561 aaagtgtaattaagccta 20440578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 3025625 - 3025455
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||| | |||  | ||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  3025625 ctaaaactgtcatttctttgcgttttttgagaat-aaaatgggg-gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 3025528  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtatttttt 210  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||| | ||||||    
T  3025527 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatcaaacctaatttttttt 3025455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 35781093 - 35781207
Alignment:
Q  84 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 183  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||    
T  35781093 taggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatca 35781192  T
Q  184 aaagtgtaattaagc 198  Q
    |||||||||||||||    
T  35781193 aaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 35779824 - 35779708
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||||| ||||||||||| | |||||||||||||||    
T  35779824 gtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggacc 35779725  T
Q  183 aaaagtgtaattaagcc 199  Q
    |||||||||||||||||    
T  35779724 aaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 15551612 - 15551495
Alignment:
Q  86 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaa 185  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  15551612 ggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaa 15551513  T
Q  186 agtgtaattaagcctagt 203  Q
    |||||||||||| |||||    
T  15551512 agtgtaattaagtctagt 15551495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 8972363 - 8972239
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 172  Q
    ||||||||  |||| |||||||||||||||||||||||||||||| |||  ||||||| |||||| |||||||| ||||| ||||||||| | |||||||    
T  8972363 aaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaa 8972264  T
Q  173 cacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||||||||||||||    
T  8972263 cacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 15552483 - 15552596
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||| |||||||||||||||||||| |||  ||||||| |||||||||||||| ||| || |||||||||||||||||||||  | ||||    
T  15552483 gtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaacattatgacc 15552581  T
Q  183 aaaagtgtaattaag 197  Q
    |||||||||||||||    
T  15552582 aaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 28143416 - 28143577
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||| ||| |||||| || | ||||  |||||||   |||     
T  28143416 ctaaaactgtcatttctctgcgtttctggag-ttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacgattttgttcgatttg 28143513  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||  |||||||||| |||||||||  || |||||  ||||||||||||||| |||||||||||    
T  28143514 aaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagccta 28143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 31797166 - 31797324
Alignment:
Q  40 aaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaa 139  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||| ||||| ||| || ||| || | |||| ||||||||   ||| ||    
T  31797166 aaaactgtcatttctctgcgtttctagag-ttgaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttgaa 31797263  T
Q  140 aagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |  |||| ||||| |||||||||  || |||||   |||||||||||||||||||||||||    
T  31797264 agaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagcct 31797324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 20128123 - 20128285
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||||||||||| |||| |||| || |||||| |||| ||||| ||| || ||| || ||||||  ||||||| || ||    
T  20128123 ctaaaactgtcatttttgtgcgtttctggagttggaaa-tagggagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgtt-tgatt 20128219  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| || |||||||||||||||||| ||  ||||  | |||||||||||||||||||||||||    
T  20128220 taaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagccta 20128285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 4355915 - 4355755
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||||||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || | ||||  |||||||  | ||    
T  4355915 ctaaaactgtcatttatgtgcgtttctggagtt-gaaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttc-gatt 4355819  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||| || | ||||||||||||||||||| |||||  | |||||||||||||||||||||||    
T  4355818 taaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagcc 4355755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 14942230 - 14942394
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaa--tgataattgaaggaccgttttgttatgtt 135  Q
    |||||||||  |||||||||| ||||||||||| |||||||||| ||||||| |||| ||||| |||||  |||||||| | ||||  |||||||   ||    
T  14942230 ctaaaactgcgatttctctgcatttctggagtt-gaaaataggatgtaggactaaaactgcaaaaaaaacatgataatttatggacaattttgttcgatt 14942328  T
Q  136 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    | |||  | || ||||| |||||||||  || |||||  ||| |||||||||||||||||||||||    
T  14942329 tgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagccta 14942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 207
Target Start/End: Complemental strand, 15550834 - 15550665
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||| |||||| |||| ||||| ||||   ||| || | ||||  |||||||  | ||    
T  15550834 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgtt-cgatt 15550737  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattt 207  Q
    |||||| || |||||||||||||||||| || || ||  | |||| ||||||||||||||| |||| |||||    
T  15550736 taaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaaacctaatattt 15550665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 63117 - 62955
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||||| ||| ||| ||||||| || |||||| |||| ||||| ||| || ||| || ||||||  |||||||   |||    
T  63117 ctaaaactgtcatttatgtgcgtttcttgag-ttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 63020  T
Q  137 taaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| || ||||||| |||||||||| || |||||    ||||||| |||||||||||||||||    
T  63019 taaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagccta 62955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 201
Target Start/End: Complemental strand, 38008110 - 38007948
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||| ||||||| ||||||| |||| |||| || || ||| |||| ||||| ||||   ||| || | ||||  |||||||  | |||    
T  38008110 taaaactgtcatttctgtgcgtttttggagttggaaa-tagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttc-gattt 38008013  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| || |||||||||||||||||| || |||||  | |||||||||||||||||||||||||    
T  38008012 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 38007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 25336093 - 25336148
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| || |||||  | |||||||||||||||||||||||||    
T  25336093 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 25336148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 42192400 - 42192240
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||| | ||||||||||||||| |||| |||| || |||||| |||| ||||| ||| || ||| || | ||||  |||||||  | ||    
T  42192400 ctaaaactgtcatttatgtgcgtttctggagttagaaa-tagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttc-gatt 42192304  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||| || ||||||| |||||||||| || |||||   ||||||||||||||||||||||||    
T  42192303 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 42192240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 44219804 - 44219642
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||  |||||| |||| ||||| ||| || |||||| ||||||  |||||||   |||     
T  44219804 ctaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacat-ataatttaaggacaattttgttcgattta 44219706  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| || |||| || ||| |||||| |  |||||    |||||||||||||||||||||||||    
T  44219705 aaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagccta 44219642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 16953320 - 16953479
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttt 136  Q
    ||||||||||||||||| ||||||| ||||||| |||| |||| || |||||| |||| ||||| ||| || ||| || | ||||  |||||||  | ||    
T  16953320 ctaaaactgtcatttctgtgcgtttttggagttggaaa-tagggagataggactaaaactgcaaaaaacat-atactttagggacatttttgttc-gatt 16953416  T
Q  137 taaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||| || |||||||||||| ||||| || |||||  | ||||||||||||||||||||||    
T  16953417 taaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 24140167 - 24140237
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattttttgtctat 216  Q
    ||||||| |||||||||| || ||| |  |||||| |||||||||||||||||||| |||||||| |||||    
T  24140167 aggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagcctaatattttttatctat 24140237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 42192736 - 42192790
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||| |||||||||| || |||||  ||||||||||||||||||||||||||    
T  42192736 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcct 42192790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 43216202 - 43216256
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| || |||||| | ||||| ||||||||||||||||||    
T  43216202 aggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcct 43216256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 6949937 - 6949990
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| || |||||  | |||||||||||||||||||||||    
T  6949937 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 6949990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 11540024 - 11540186
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||  || ||| |||| ||||| ||| || ||| || | ||||  |||||||  | |||    
T  11540024 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaacat-atagtttatggacgattttgtt-cgattt 11540121  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||| || ||||||| |||||||||| || |||||  ||| |||||||||| ||||||||||||    
T  11540122 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagccta 11540186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 3822987 - 3822924
Alignment:
Q  133 gttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||| |||||||||||| ||||||| ||||| ||  ||||  ||||||||||||||||||||||    
T  3822987 gtttaaaaagggcaggatcaatttcatgagttggttaaaatgcgaggaccaaaagtgtaattaa 3822924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 33920772 - 33920710
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaa 100  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| || |||||| |||| |||||    
T  33920772 ctaaaactgtcatttctatgcgtttctggag-ttgaaaatagggagataggactaaaactgcaa 33920710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 43160170 - 43160006
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatg-ataattgaaggaccgttttgttatgtt 135  Q
    ||||||||||||||| | ||||||||||||| ||||||||||| || |||||| |||| ||||| ||||||| ||| || | ||||  |||||||  | |    
T  43160170 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagggagataggactaaaactgcaa-aaaaatgtatagtttagggacgattttgtt-cgat 43160074  T
Q  136 ttaaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 202  Q
    ||||||| || | |||||||||||||||| |  |||||  | |||||||||| ||||||||| |||||    
T  43160073 ttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaatcctag 43160006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 32418212 - 32418158
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| || |||||  | ||||||| ||||||||||||||||    
T  32418212 aggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagcct 32418158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 4356142 - 4356179
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  4356142 ctaaaactgtcatttctgtgcgtttctggagttggaaa 4356179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 4809039 - 4809002
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  4809039 ctaaaactgtcatttctgtgcgtttctggagttggaaa 4809002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 5560936 - 5560973
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  5560936 ctaaaactgtcatttctgtgcgtttctggagttggaaa 5560973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 13399582 - 13399545
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  13399582 ctaaaactgtcatttctgtgcgtttctggagttggaaa 13399545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 43160397 - 43160433
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaa 43160433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 44220140 - 44220192
Alignment:
Q  148 gaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||| |||||||||| || |||||  ||||||| ||||||||||||||||||    
T  44220140 gaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagcct 44220192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 1e-87; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 39154379 - 39154566
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  39154379 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 39154478  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39154479 ttgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 5540002 - 5539817
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  5540002 agcataggggtaggtctaaaaccgcctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataa 5539903  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5539902 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 50970464 - 50970276
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  50970464 agcataggggtaggtctaaaaccgccaaaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataa 50970365  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970364 ttgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 8678727 - 8678532
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  8678727 agcataggggtatgtctaaaaccgcctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataa 8678628  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtatttt 208  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  8678627 ttgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatattatttt 8678532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 13 - 208
Target Start/End: Original strand, 17433574 - 17433769
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  17433574 agcataggggtaggtctaaaaccgtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 17433673  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtatttt 208  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  17433674 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaagtctattatttt 17433769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 18984478 - 18984665
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18984478 agcataggggaaggtctaaaaccgcctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 18984577  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18984578 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 21856228 - 21856044
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  21856228 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataa 21856129  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  21856128 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 29869978 - 29870164
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  29869978 agcatatgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 29870077  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  29870078 ttgaaggaccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 33144103 - 33143925
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||| |||||||||||    
T  33144103 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataa 33144004  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgta 191  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33144003 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 15173453 - 15173640
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  15173453 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 15173552  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| ||||||| |||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15173553 ttgaaggaccattttgttctgttttaaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 4636330 - 4636515
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  4636330 agcataggggtaggtctaaaatcgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 4636429  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    |||||||| ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  4636430 ttgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 202
Target Start/End: Complemental strand, 15646378 - 15646189
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  15646378 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataa 15646279  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctag 202  Q
    |||||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15646278 ttgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctag 15646189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 29307326 - 29307487
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29307326 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29307425  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  29307426 aaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 26859232 - 26859059
Alignment:
Q  26 gtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 125  Q
    |||||||||||||||||||| | | |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  26859232 gtctaaaaccgcctaaaactattacttctctgcgtttctggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 26859133  T
Q  126 ttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||| |||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  26859132 ttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 5962762 - 5962579
Alignment:
Q  15 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataatt 114  Q
    |||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||    
T  5962762 cataggggtaagtttaaaaccgcctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagtt 5962663  T
Q  115 gaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 198  Q
    ||| |||||||||||| |||||||||||||| |||||| |||||||| ||| ||| |||||||||||||||| |||||||||||    
T  5962662 gaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 9019347 - 9019510
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  9019347 ctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 9019446  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  9019447 aaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 9019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 50970663 - 50970824
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50970663 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 50970761  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  50970762 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 18984279 - 18984117
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| |||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18984279 ctaaaactatcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984181  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  18984180 aaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 5540203 - 5540364
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5540203 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttcttctgtttt 5540301  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5540302 aaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 15646580 - 15646741
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15646580 ctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 15646678  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  15646679 aaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 17112467 - 17112282
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  17112467 agcataggggtaggtctaaaaccgcctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataa 17112368  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||  |||| || | ||||||||||||   ||||||||| |||||||  ||||||| ||| ||||||||||||||||||||    
T  17112367 ttgaaggactattttattctattttaaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 29869780 - 29869619
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  29869780 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttt 29869682  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  29869681 aaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 29307113 - 29306953
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29307113 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29307015  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307014 aaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 33144304 - 33144462
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||| ||||||| || ||||||| ||||||    
T  33144304 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtccattttgttctgtttt 33144402  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33144403 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 8678927 - 8679086
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||| ||| |||||  | ||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  8678927 ctaaaactgtcatttctctgcatttttggagaat-aaaat-ggaggtaggacgaaaaatgcaacaaaaatgataattgaatgacctttttgttctgtttt 8679024  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  8679025 aaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 21856428 - 21856588
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  21856428 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggaccgttttgttctgtttt 21856526  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||| ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  21856527 aaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 15173256 - 15173099
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||   ||||    
T  15173256 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttcaatttt 15173158  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  15173157 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 5962963 - 5963120
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||||||||| ||| |||||||| | ||||    
T  5962963 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgttctatttt 5963061  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||    
T  5963062 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 9019122 - 9018971
Alignment:
Q  49 atttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcagg 148  Q
    |||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||     
T  9019122 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcaga 9019024  T
Q  149 accaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9019023 accagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagccta 9018971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 17433376 - 17433216
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  17433376 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 17433278  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||| |  || |||| |||||||||||||||| ||||||||||||||||||||||||    
T  17433277 aaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 26859445 - 26859606
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||| | |||||||||||||| |||||  |  |||| ||  |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26859445 ctaaaactattatttctctgcgtttttggagaat--aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgttctgtttt 26859542  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||  | |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  26859543 aaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 45859799 - 45859703
Alignment:
Q  216 ttctgcagtatcttgcatggtctctgaagcggagcaaggctgtgaataactgtaaaagggtggtaggtgtgattggaaaaggccacatggatggtgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45859799 ttctgcagtatcttgcatggtctctgaagcggagcaaggctgtgaataactgtaaaagggtggtaggtgtgattggaaaaggccacatgaatggtgt 45859703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 52268406 - 52268289
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||| ||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  52268406 gtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggacc 52268307  T
Q  183 aaaagtgtaattaagcct 200  Q
    ||||||||||||||||||    
T  52268306 aaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 39154179 - 39154021
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||| ||||||| |||||  | | ||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  39154179 ctaaaactgtcatttctatgcgtttttggagaat-agaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgttctgtttt 39154081  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||||||| || || ||||||||||| ||||||||| || |||||||||||||||||||    
T  39154080 aaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 52269177 - 52269296
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||| ||||||||||||||||| |||| |||  ||||||| |||||||||||||||| ||| ||||| |||||| | |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  183 aaaagtgtaattaagcctag 202  Q
    ||||||||||||||| ||||    
T  52269277 aaaagtgtaattaagtctag 52269296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 2733416 - 2733504
Alignment:
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagccta 2733504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  124 ttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  99 aacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgta 191  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 44802557 - 44802719
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||| |||||||| |||| |||||||||||| |||||||||| |||| || |||| ||||| ||| |||||| || | ||||  |||||||  ||||     
T  44802557 ctaaaattgtcatttttctgtgtttctggagtt-gaaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttg 44802655  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||  |||| ||||| |||||||||  || |||||  | |||||||||||||||||||||||||    
T  44802656 aaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccta 44802719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 17088526 - 17088687
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |||| || |||| ||||| ||| || ||| || | |||| |||||||| || |||    
T  17088526 ctaaaactgtcatttctctgcgtttctaga-tttgaaaataggaggtagaactaaaactgcaaaaaatat-atagtttagggacggttttgtt-tgattt 17088622  T
Q  138 aaaag-ggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
     |||| |||| ||||| |||||||||  |  |||||   ||||||||||||||||||||||||||    
T  17088623 gaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagccta 17088687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 4636132 - 4636033
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| || ||  | ||||| ||  |||| || ||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  4636132 ctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg-tttgttctgtttt 4636035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 45048504 - 45048683
Alignment:
Q  19 ggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaag 118  Q
    |||||||||||||||| || |||| | |  |||||||||||||||||||| |||||||||||| ||||||| |||| ||||| ||| |||||| ||  ||    
T  45048504 ggggtaggtctaaaactgcataaa-cggctatttctctgcgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-tag 45048600  T
Q  119 gaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||| ||||||||   ||  |||  || | ||||| ||||||||   || |||||  |||||||||||||||||||||| ||||    
T  45048601 gacggttttgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaaaccta 45048683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 50419725 - 50419806
Alignment:
Q  118 ggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    |||||||||||||   |||||||| ||||||||||||||||||||| || | |||  ||| ||||||||||| |||||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagcc 50419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 29438983 - 29438929
Alignment:
Q  146 aggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||||||||||| || |||||  | ||||||||||||||||||||||||    
T  29438983 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 29438929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 17088310 - 17088243
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaa 106  Q
    ||||||||| ||||||||||| |||||| |||| |||||||||| ||||||| |||| ||||| |||||    
T  17088310 ctaaaactgccatttctctgcatttctgaagtt-gaaaataggaggtaggactaaaattgcaaaaaaaa 17088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 52233799 - 52233736
Alignment:
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||| || ||||||||||| ||| ||  ||||| ||||||| |||||||||||||||||||    
T  52233799 aaaagggtagcaccaatttcgtaagttggttaaaacccgaggacgaaaagtgtaattaagccta 52233736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 39843509 - 39843571
Alignment:
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||| ||||||||||||||||||||| || | |||  |||||||| |||||||||| ||||||    
T  39843509 aaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaataaagcct 39843571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 45048314 - 45048253
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaa 100  Q
    |||||||||| |||||| ||||||||||||| ||||||||| || ||||||| |||| |||||    
T  45048314 ctaaaactgttatttctatgcgtttctggag-ttgaaaatatgaggtaggactaaaactgcaa 45048253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 8229800 - 8229763
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  8229800 ctaaaactgtcatttctgtgcgtttctggagttagaaa 8229763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 8230027 - 8230064
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  8230027 ctaaaactgtcatttctgtgcgtttctggagttggaaa 8230064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 17641750 - 17641787
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  17641750 ctaaaactgtcatttctgtgcgtttctggagttggaaa 17641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 34555766 - 34555803
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  34555766 ctaaaactgtcatttctgtgcgtttctggagttggaaa 34555803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 44954386 - 44954349
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  44954386 ctaaaactgtcatttctgtgcgtttctggagttggaaa 44954349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 44954612 - 44954649
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaa 75  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  44954612 ctaaaactgtcatttctgtgcgtttctggagttggaaa 44954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 50304490 - 50304441
Alignment:
Q  148 gaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||| |||||||||| || |||||  |||||||||||||||||||||||    
T  50304490 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 17641864 - 17641912
Alignment:
Q  148 gaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    ||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  17641864 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 2028 - 2214
Alignment:
Q  15 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataatt 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2028 cataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2127  T
Q  115 gaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||| |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  2128 gaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 1827 - 1665
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  1827 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacattttgttctgtttt 1729  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1728 aaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 156; Significance: 7e-83; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 10989 - 11168
Alignment:
Q  20 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaagg 119  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10989 gggtaggtctaaaaccgcctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg 11088  T
Q  120 accgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  11089 accgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 10781 - 10640
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||| ||| |||||  | ||||| |   ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  10781 ctaaaactgtcatttctctgcatttttggagaat-aaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggaccgttttgttctgtttt 10683  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgagga 180  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  10682 aaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 136; Significance: 6e-71; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 64664 - 64847
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  64664 agcatagaggtaggtctaaaaccgcctaaaactgttatttttctccgtttctggagtttgaaaatagaagataggacgaaaaatgcaacaaaaatgataa 64763  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    || ||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  64764 ttaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 64462 - 64301
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  64462 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 64364  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||| ||||| || ||||||||||| | |||||||||||||||||||||||||||||||||    
T  64363 aaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 205754 - 205911
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||| ||||||| |||| ||||| ||| |||||| || | |||| ||||||||   |||     
T  205754 ctaaaactgccatttctctgcgtttttggagtt-gaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacggttttgttcgatttg 205851  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    |||  |||||||||| |||||||||| || |||||   |||||| |||||||||||||||    
T  205852 aaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 210786 - 210884
Alignment:
Q  102 aaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 200  Q
    |||||||||| || | |||| ||||||||   ||| |||  |||||||||| |||| ||||| || |||||   |||||||||||||||||||||||||    
T  210786 aaaaatgatagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 210884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 205110 - 205038
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgata 111  Q
    ||||||||  |||||||||| |||||| ||||| |||||||||| ||||||| |||| ||||| ||| ||||||    
T  205110 ctaaaacttccatttctctgtgtttctagagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 1125 - 1286
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  1125 ctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 1224  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  1225 aaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 912 - 755
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  912 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccgttttgttctgtttt 815  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  814 aaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 5160 - 5334
Alignment:
Q  19 ggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaag 118  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||     
T  5160 ggggtaagtctaaaaccgcctaaaactgtcatttttctgcgtttctggagtttgaaaatagga----ggacgaaaaatgcaacaaaaatgataattgaat 5255  T
Q  119 gaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 197  Q
     |||||||| || |||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  5256 taccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 4953 - 4791
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4953 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4855  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4854 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 182
Target Start/End: Original strand, 16855 - 17024
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16855 agcataggggtaggtctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 16954  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||  ||||||| |||||||||| ||| ||| || ||||||||||| | |||||||||||||||    
T  16955 ttgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 16656 - 16565
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 130  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  16656 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 4389 - 4242
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||| |||||||||||||||||||||||||    
T  4389 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 4290  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtg 160  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  4289 ttgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 4592 - 4754
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||| |||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  4592 ctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4690  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4691 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 42330 - 42172
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  42330 ctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 42231  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||| ||||||| || |||||||| ||| |||||||||||| || ||||||||||||||    
T  42230 aaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 42544 - 42705
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  42544 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggaccgttttgttctgtttt 42641  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||||||| | || |||| ||||||| ||||||||||||| |||||||| ||||||||||||    
T  42642 aaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagccta 42705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 134058 - 134220
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||| ||||||||||| ||||||||| ||| ||    
T  134058 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgttctgtatt 134156  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  134157 aaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 10116 - 9935
Alignment:
Q  13 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataa 112  Q
    |||||||||||| || ||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||| ||||| || ||||||| ||||||    
T  10116 agcataggggtatgtttaaaaccgcctaaaattgtcatttctct-cgtttcttgagtttgaaaataggaggtaggatgaaaa-tgtaacaaaattgataa 10019  T
Q  113 ttgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 196  Q
    |||||||||| ||||||| | | ||||||||||| || || |||||||| ||||| |||||||||||||||||| |||||||||    
T  10018 ttgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 10301 - 10414
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||| |||||||||||| ||||||||||||||||    
T  10301 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggacc 10400  T
Q  183 aaaagtgtaattaa 196  Q
    ||||||||||||||    
T  10401 aaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 217
Target Start/End: Complemental strand, 18994 - 18818
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 137  Q
    |||||||||| |||||||||||||| |||||  | ||||| ||  |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18994 ctaaaactgttatttctctgcgtttttggagaat-aaaatgggg-gtaggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgtttt 18897  T
Q  138 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctagtattttttgtctatt 217  Q
    ||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||| ||||||  |||||||||| ||||    
T  18896 aaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct-ttattttttgtttatt 18818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 19069 - 19166
Alignment:
Q  102 aaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 28674 - 28798
Alignment:
Q  85 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaa 184  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||    
T  28674 aggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaa 28773  T
Q  185 aagtgtaattaagcctagtattttt 209  Q
    ||||||||||| ||||  |||||||    
T  28774 aagtgtaattatgccttttattttt 28798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 679 - 568
Alignment:
Q  87 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaa 186  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| || || ||||||||||||||||||||||||||| |||||    
T  679 gacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaa 580  T
Q  187 gtgtaattaagc 198  Q
    ||||||||||||    
T  579 gtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 565 - 454
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    |||||||||||||||||||||||||||||||||||||||  || |||| |||||||||||  || ||||| |||||||||||||||||||||||| ||||    
T  565 gtaggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagacc 466  T
Q  183 aaaagtgtaatta 195  Q
    |||| ||||||||    
T  465 aaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  96 tgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 195  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||||| ||||| |||||||| || |||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  196 a 196  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 61887 - 62000
Alignment:
Q  83 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 182  Q
    ||||||||||||||  ||||||||||||| ||||| ||   ||||||| | ||||||||||| ||||||| |||||||||||| |||||||||||||| |    
T  61887 gtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatc 61986  T
Q  183 aaaagtgtaattaa 196  Q
    ||||||||||||||    
T  61987 aaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  125 tttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 201  Q
    |||||| | |||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 7707 - 7784
Alignment:
Q  73 aaaataggaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggac 150  Q
    ||||||||  |||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||| |||||    
T  7707 aaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 6777 - 6818
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 80  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  6777 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 6551 - 6461
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 130  Q
    |||||||||||||||| |||||||||| || ||| |||||||||| |||||| |||| ||||| ||| || |||||| ||||||  |||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaag-ttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgtt 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 6795 - 6836
Alignment:
Q  38 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 80  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  6795 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 6836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 6569 - 6479
Alignment:
Q  39 taaaactgtcatttctctgcgtttctggagtttgaaaataggaag-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 130  Q
    |||||||||||||||| |||||||||| || ||| |||||||||| |||||| |||| ||||| ||| || |||||| ||||||  |||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaag-ttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgtt 6479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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