View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19406_low_3 (Length: 599)

Name: NF19406_low_3
Description: NF19406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19406_low_3
NF19406_low_3
[»] chr2 (39 HSPs)
chr2 (361-580)||(33629183-33629403)
chr2 (414-586)||(23343973-23344145)
chr2 (361-468)||(36237727-36237836)
chr2 (307-354)||(1297123-1297170)
chr2 (307-354)||(9275591-9275638)
chr2 (307-354)||(29719451-29719498)
chr2 (307-354)||(1296384-1296431)
chr2 (307-354)||(9276330-9276377)
chr2 (307-354)||(11750262-11750309)
chr2 (307-354)||(22560568-22560615)
chr2 (307-354)||(36237636-36237683)
chr2 (307-349)||(9540336-9540378)
chr2 (307-349)||(12725620-12725662)
chr2 (307-341)||(15902895-15902929)
chr2 (307-349)||(22301875-22301917)
chr2 (307-349)||(24754999-24755041)
chr2 (307-349)||(27177917-27177959)
chr2 (307-349)||(29513152-29513194)
chr2 (110-203)||(636978-637071)
chr2 (307-356)||(29559418-29559467)
chr2 (313-349)||(16692979-16693015)
chr2 (305-349)||(20432373-20432417)
chr2 (307-351)||(26589020-26589064)
chr2 (310-354)||(42182615-42182659)
chr2 (307-354)||(18174670-18174717)
chr2 (308-351)||(26588244-26588287)
chr2 (312-354)||(11007241-11007283)
chr2 (307-349)||(11751074-11751116)
chr2 (307-349)||(18174104-18174146)
chr2 (307-349)||(18820437-18820479)
chr2 (307-349)||(23857029-23857071)
chr2 (307-341)||(26752736-26752770)
chr2 (307-349)||(27178650-27178692)
chr2 (307-349)||(34812861-34812903)
chr2 (307-349)||(40252027-40252069)
chr2 (298-356)||(42459047-42459105)
chr2 (308-349)||(6584232-6584273)
chr2 (305-354)||(23856638-23856687)
chr2 (307-355)||(29512376-29512424)
[»] chr7 (50 HSPs)
chr7 (361-586)||(43928549-43928775)
chr7 (361-586)||(45162063-45162292)
chr7 (361-586)||(29188444-29188672)
chr7 (361-586)||(25599116-25599333)
chr7 (361-558)||(21156741-21156939)
chr7 (361-549)||(3688478-3688662)
chr7 (307-369)||(3903324-3903387)
chr7 (307-369)||(24719339-24719402)
chr7 (307-369)||(25599026-25599089)
chr7 (307-369)||(30661440-30661503)
chr7 (307-369)||(37949609-37949672)
chr7 (305-349)||(43065122-43065166)
chr7 (307-354)||(7668486-7668533)
chr7 (307-369)||(19067641-19067704)
chr7 (307-354)||(25342501-25342548)
chr7 (307-354)||(25343307-25343354)
chr7 (307-354)||(26636107-26636154)
chr7 (307-354)||(46428191-46428238)
chr7 (307-349)||(13785599-13785641)
chr7 (307-368)||(19068381-19068443)
chr7 (307-349)||(30660597-30660639)
chr7 (307-349)||(37950473-37950515)
chr7 (307-349)||(45099899-45099941)
chr7 (307-354)||(3772527-3772574)
chr7 (307-354)||(24389617-24389664)
chr7 (307-354)||(26636861-26636908)
chr7 (307-354)||(27948450-27948497)
chr7 (152-207)||(41708605-41708660)
chr7 (307-349)||(1417612-1417654)
chr7 (307-349)||(3029204-3029246)
chr7 (307-349)||(31278160-31278202)
chr7 (307-349)||(37395505-37395547)
chr7 (307-349)||(38225981-38226023)
chr7 (307-349)||(47719710-47719752)
chr7 (307-354)||(16664126-16664173)
chr7 (307-354)||(17638486-17638533)
chr7 (307-354)||(18977770-18977817)
chr7 (307-354)||(21496984-21497031)
chr7 (307-354)||(25343240-25343287)
chr7 (307-354)||(40273564-40273611)
chr7 (307-354)||(45161973-45162020)
chr7 (307-349)||(3688388-3688430)
chr7 (307-349)||(14305094-14305136)
chr7 (307-349)||(14686135-14686177)
chr7 (303-349)||(23889812-23889858)
chr7 (303-349)||(23901158-23901204)
chr7 (311-349)||(24453732-24453770)
chr7 (307-341)||(46428831-46428865)
chr7 (306-354)||(21156976-21157024)
chr7 (132-184)||(23138682-23138734)
[»] chr6 (23 HSPs)
chr6 (361-575)||(19311095-19311311)
chr6 (307-354)||(10171280-10171327)
chr6 (307-354)||(26529513-26529560)
chr6 (307-354)||(8488473-8488520)
chr6 (307-354)||(10171966-10172013)
chr6 (310-349)||(19322990-19323029)
chr6 (307-354)||(19323767-19323814)
chr6 (307-354)||(26528827-26528874)
chr6 (307-353)||(1366972-1367018)
chr6 (311-349)||(19311832-19311870)
chr6 (307-349)||(33436279-33436321)
chr6 (307-354)||(12344898-12344945)
chr6 (307-354)||(19311005-19311052)
chr6 (307-349)||(8489285-8489327)
chr6 (311-349)||(9441245-9441283)
chr6 (307-349)||(18227736-18227777)
chr6 (307-349)||(33435344-33435386)
chr6 (308-349)||(9441985-9442026)
chr6 (308-349)||(9442066-9442107)
chr6 (307-351)||(2512442-2512486)
chr6 (306-354)||(5861889-5861937)
chr6 (307-351)||(20833970-20834014)
chr6 (307-339)||(25060820-25060852)
[»] chr4 (53 HSPs)
chr4 (361-586)||(24008463-24008692)
chr4 (501-586)||(52107555-52107640)
chr4 (307-356)||(53772812-53772861)
chr4 (305-349)||(52871301-52871345)
chr4 (307-354)||(47688480-47688527)
chr4 (307-349)||(2444377-2444419)
chr4 (307-356)||(599300-599349)
chr4 (308-349)||(55976172-55976213)
chr4 (311-354)||(16903644-16903687)
chr4 (307-354)||(19080390-19080437)
chr4 (307-354)||(20774181-20774228)
chr4 (307-354)||(26147033-26147080)
chr4 (307-354)||(30573710-30573757)
chr4 (307-354)||(47785800-47785847)
chr4 (307-354)||(53732440-53732487)
chr4 (306-341)||(55001454-55001489)
chr4 (307-349)||(3654521-3654563)
chr4 (307-349)||(8248526-8248568)
chr4 (307-349)||(8266191-8266233)
chr4 (125-207)||(13849366-13849448)
chr4 (307-349)||(19550291-19550333)
chr4 (307-349)||(31329723-31329765)
chr4 (307-349)||(42882687-42882729)
chr4 (360-417)||(45920985-45921043)
chr4 (307-349)||(53773592-53773634)
chr4 (364-417)||(55001343-55001397)
chr4 (366-450)||(5046084-5046169)
chr4 (313-354)||(53733732-53733773)
chr4 (309-349)||(9365822-9365862)
chr4 (298-354)||(24374785-24374841)
chr4 (148-203)||(12107168-12107223)
chr4 (311-346)||(16903677-16903712)
chr4 (307-354)||(56262483-56262530)
chr4 (307-349)||(2446167-2446209)
chr4 (307-349)||(5046488-5046530)
chr4 (307-349)||(7841549-7841591)
chr4 (307-341)||(8247701-8247735)
chr4 (307-341)||(8265366-8265400)
chr4 (307-349)||(24158826-24158868)
chr4 (307-349)||(24551929-24551971)
chr4 (307-349)||(26159627-26159669)
chr4 (307-349)||(32089619-32089661)
chr4 (311-349)||(43146654-43146692)
chr4 (307-349)||(44469497-44469539)
chr4 (307-349)||(47687914-47687956)
chr4 (307-349)||(50184433-50184475)
chr4 (307-349)||(53147876-53147918)
chr4 (307-349)||(55000692-55000734)
chr4 (315-349)||(55976961-55976995)
chr4 (308-349)||(12919591-12919632)
chr4 (307-348)||(40495100-40495141)
chr4 (103-195)||(9696306-9696398)
chr4 (149-213)||(46855851-46855915)
[»] chr8 (28 HSPs)
chr8 (364-579)||(42007608-42007822)
chr8 (361-586)||(26395135-26395348)
chr8 (361-510)||(25929236-25929386)
chr8 (361-549)||(17725427-17725611)
chr8 (361-468)||(28930705-28930814)
chr8 (307-354)||(38576302-38576349)
chr8 (303-349)||(26654383-26654429)
chr8 (307-349)||(41974645-41974687)
chr8 (307-356)||(8372918-8372967)
chr8 (307-351)||(8373696-8373740)
chr8 (307-349)||(3165127-3165169)
chr8 (307-349)||(32414529-32414571)
chr8 (98-184)||(42650201-42650286)
chr8 (308-349)||(9197101-9197142)
chr8 (307-348)||(37732831-37732872)
chr8 (305-349)||(28929848-28929892)
chr8 (307-354)||(45920-45967)
chr8 (307-354)||(31602021-31602068)
chr8 (307-349)||(3043970-3044012)
chr8 (307-349)||(9197825-9197867)
chr8 (307-349)||(11686231-11686273)
chr8 (307-341)||(14825648-14825682)
chr8 (307-349)||(17725659-17725701)
chr8 (307-349)||(22320379-22320421)
chr8 (307-349)||(26652298-26652340)
chr8 (307-341)||(27441471-27441505)
chr8 (307-349)||(31641516-31641558)
chr8 (307-349)||(39860115-39860159)
[»] chr3 (40 HSPs)
chr3 (361-478)||(13476296-13476414)
chr3 (361-468)||(45081252-45081361)
chr3 (307-354)||(265099-265146)
chr3 (307-349)||(17603173-17603215)
chr3 (307-349)||(21727535-21727577)
chr3 (360-468)||(46150580-46150689)
chr3 (307-349)||(48648208-48648250)
chr3 (297-349)||(14871148-14871200)
chr3 (305-349)||(40872814-40872858)
chr3 (311-354)||(17605715-17605758)
chr3 (307-354)||(31974656-31974703)
chr3 (307-354)||(46150730-46150777)
chr3 (308-354)||(981673-981719)
chr3 (307-349)||(37987238-37987280)
chr3 (303-349)||(51827500-51827546)
chr3 (311-349)||(55373712-55373750)
chr3 (308-349)||(11203207-11203248)
chr3 (308-349)||(20212986-20213027)
chr3 (307-356)||(31115598-31115647)
chr3 (314-351)||(44699824-44699861)
chr3 (312-349)||(48413329-48413366)
chr3 (308-349)||(52282418-52282459)
chr3 (314-349)||(17603967-17604002)
chr3 (307-354)||(37520562-37520609)
chr3 (311-354)||(41458042-41458085)
chr3 (307-354)||(45081404-45081451)
chr3 (307-354)||(48507033-48507080)
chr3 (303-349)||(10847915-10847961)
chr3 (307-349)||(13477062-13477104)
chr3 (307-349)||(20213537-20213579)
chr3 (307-349)||(37988224-37988266)
chr3 (307-349)||(46149634-46149676)
chr3 (307-349)||(48649179-48649221)
chr3 (307-349)||(48765076-48765118)
chr3 (307-349)||(51469285-51469327)
chr3 (307-349)||(52605489-52605531)
chr3 (307-349)||(54458671-54458713)
chr3 (313-354)||(13477779-13477820)
chr3 (308-349)||(33277510-33277551)
chr3 (173-213)||(37928842-37928882)
[»] chr1 (46 HSPs)
chr1 (361-478)||(4433183-4433301)
chr1 (361-444)||(4134668-4134752)
chr1 (307-369)||(34309215-34309278)
chr1 (307-369)||(4433833-4433895)
chr1 (307-369)||(4439192-4439254)
chr1 (307-349)||(25469092-25469134)
chr1 (307-368)||(27256698-27256760)
chr1 (307-368)||(34308477-34308539)
chr1 (307-349)||(49680815-49680857)
chr1 (298-354)||(30663353-30663409)
chr1 (305-349)||(45818023-45818067)
chr1 (307-351)||(46391870-46391914)
chr1 (307-354)||(10121553-10121600)
chr1 (307-354)||(13262837-13262884)
chr1 (307-354)||(13263517-13263564)
chr1 (307-354)||(30663977-30664024)
chr1 (307-354)||(30932796-30932843)
chr1 (307-349)||(7559205-7559247)
chr1 (307-349)||(10120787-10120829)
chr1 (307-368)||(11548804-11548866)
chr1 (307-349)||(17171935-17171977)
chr1 (307-341)||(17172676-17172710)
chr1 (307-349)||(19172581-19172623)
chr1 (307-349)||(24991974-24992016)
chr1 (307-349)||(47967866-47967908)
chr1 (305-354)||(8988549-8988598)
chr1 (305-354)||(46812188-46812237)
chr1 (149-213)||(8050486-8050550)
chr1 (152-184)||(16939476-16939508)
chr1 (307-354)||(168894-168941)
chr1 (307-354)||(7406249-7406296)
chr1 (307-354)||(8987794-8987841)
chr1 (307-354)||(25468514-25468561)
chr1 (307-354)||(28181537-28181584)
chr1 (307-349)||(7558453-7558495)
chr1 (307-349)||(11704814-11704856)
chr1 (307-341)||(13142681-13142715)
chr1 (307-349)||(19171782-19171824)
chr1 (307-349)||(28182078-28182120)
chr1 (307-349)||(36390373-36390415)
chr1 (307-349)||(37577651-37577693)
chr1 (307-349)||(37853141-37853183)
chr1 (94-187)||(44836123-44836216)
chr1 (313-349)||(30931898-30931934)
chr1 (101-213)||(50905438-50905550)
chr1 (148-204)||(52427222-52427278)
[»] scaffold0096 (1 HSPs)
scaffold0096 (308-356)||(39901-39949)
[»] chr5 (38 HSPs)
chr5 (307-351)||(234705-234749)
chr5 (307-351)||(237824-237868)
chr5 (307-351)||(19359708-19359752)
chr5 (307-354)||(6476791-6476838)
chr5 (307-354)||(29046033-29046080)
chr5 (307-349)||(7632099-7632141)
chr5 (360-417)||(9407968-9408026)
chr5 (307-349)||(19128774-19128816)
chr5 (360-417)||(19128861-19128919)
chr5 (307-351)||(19360479-19360523)
chr5 (361-420)||(22212876-22212936)
chr5 (307-354)||(235596-235643)
chr5 (307-346)||(1283533-1283572)
chr5 (307-346)||(10554526-10554565)
chr5 (311-354)||(10554555-10554598)
chr5 (307-354)||(27364487-27364534)
chr5 (307-354)||(28705879-28705926)
chr5 (307-349)||(1281840-1281882)
chr5 (311-349)||(1283505-1283543)
chr5 (307-349)||(1554088-1554130)
chr5 (307-349)||(14478925-14478967)
chr5 (307-349)||(25858214-25858256)
chr5 (308-354)||(28705170-28705216)
chr5 (307-349)||(29087929-29087971)
chr5 (307-354)||(236929-236976)
chr5 (307-354)||(4084884-4084931)
chr5 (307-354)||(17071228-17071275)
chr5 (306-349)||(22798904-22798947)
chr5 (307-354)||(34600265-34600312)
chr5 (302-349)||(34709042-34709089)
chr5 (307-354)||(38056798-38056845)
chr5 (307-349)||(17071799-17071841)
chr5 (307-349)||(20854910-20854952)
chr5 (307-349)||(36038699-36038741)
chr5 (307-349)||(38057600-38057642)
chr5 (307-349)||(43510236-43510278)
chr5 (308-349)||(22799765-22799806)
chr5 (316-349)||(27363779-27363812)
[»] scaffold0176 (1 HSPs)
scaffold0176 (307-349)||(26596-26638)
[»] scaffold0085 (2 HSPs)
scaffold0085 (307-349)||(22076-22118)
scaffold0085 (313-354)||(15859-15900)
[»] scaffold1213 (1 HSPs)
scaffold1213 (303-349)||(1896-1942)
[»] scaffold0504 (1 HSPs)
scaffold0504 (307-349)||(5385-5427)
[»] scaffold2007 (1 HSPs)
scaffold2007 (307-354)||(755-802)
[»] scaffold0093 (1 HSPs)
scaffold0093 (307-354)||(23729-23776)
[»] scaffold1207 (1 HSPs)
scaffold1207 (307-349)||(1591-1633)
[»] scaffold0418 (1 HSPs)
scaffold0418 (307-348)||(6891-6932)
[»] scaffold0012 (1 HSPs)
scaffold0012 (312-341)||(181019-181048)


Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 361 - 580
Target Start/End: Complemental strand, 33629403 - 33629183
Alignment:
Q  361 ttttatttattgtgtatcctttt-ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33629403 ttttatttattgtgtatccttttattcaatcacacactattattatttttaatgattacaaaacctaaattggaaacataatcctatcataattctcctt 33629304  T
Q  460 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaat 559  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33629303 attctcttgtctgcaaaattgaaataccccatagttgaataattaaaatacttccaagatattattgtttagaatgaattggaaatattagttgttaaat 33629204  T
Q  560 gaaattccctctatgatctct 580  Q
    |||||||||||||||||||||    
T  33629203 gaaattccctctatgatctct 33629183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 414 - 586
Target Start/End: Original strand, 23343973 - 23344145
Alignment:
Q  414 attacaacacctaaattggaaacataatcctatcataattctccttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctc 513  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||    
T  23343973 attacaaaacctaaattggaaacataatcctatcataattctctttattctcttgtctgcaaaattgaaatattttatagttgaataattaaaatacttc 23344072  T
Q  514 taagatattattgtttagaatgaattggaaatattagttgttaaatgaaattccctctatgatctctgctcct 586  Q
     |||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||    
T  23344073 aaagatattattgtttaaaatgaattggaaatattagttgttaaatgcaatttcctctatgatctcttctcct 23344145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 468
Target Start/End: Original strand, 36237727 - 36237836
Alignment:
Q  361 ttttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatga-ttacaacacctaaattggaaacataatcctatcataattctcct 458  Q
    |||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| |||||| ||| ||||||||||||| ||| |||||| || || ||    
T  36237727 ttttatttattgtgtacccttcttttcaatcacacactattattgttttcaatgatttacaaaaccgaaattggaaacatgatcatatcatgatcctact 36237826  T
Q  459 tattctcttg 468  Q
     |||||||||    
T  36237827 cattctcttg 36237836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 1297170 - 1297123
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1297170 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 1297123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 9275591 - 9275638
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  9275591 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 9275638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 29719451 - 29719498
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  29719451 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 29719498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 1296384 - 1296431
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  1296384 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 1296431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 9276377 - 9276330
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  9276377 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 9276330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 11750262 - 11750309
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  11750262 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 11750309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 22560615 - 22560568
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  22560615 gatccgttgacatcaggtgtcaacggattcgttgacaccaaatctcaa 22560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 36237636 - 36237683
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  36237636 gatccgttgacaccaggtgtcaacggattcattgacaccaaatttcaa 36237683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 9540336 - 9540378
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  9540336 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 9540378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 12725662 - 12725620
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  12725662 gatccgttgacaccaggtgtcaacggatttgttgacaccaaat 12725620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 15902929 - 15902895
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    |||||||||||||||||||||||||||||||||||    
T  15902929 gatccgttgacaccaggtgtcaacggattcgttga 15902895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 22301917 - 22301875
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  22301917 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 22301875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 24755041 - 24754999
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  24755041 gatccgttgacaccaggtgtcaattgattcgttgaaaccaaat 24754999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 27177917 - 27177959
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  27177917 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 27177959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 29513194 - 29513152
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  29513194 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 29513152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 637071 - 636978
Alignment:
Q  110 tcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttga 203  Q
    ||||||||||  || |||||||||||||||   | ||||||||||||||||||||||| || |  |||||||||| ||||| |||  |||||||    
T  637071 tcatcataaactcacacacacaaagtggaggaacagatgtttgaaccccaatcataacgtccggtctaacaatttcgacatttttaccggttga 636978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 29559467 - 29559418
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 356  Q
    |||| |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  29559467 gatctgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaatc 29559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 16693015 - 16692979
Alignment:
Q  313 ttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16693015 ttgacaccaggtgtcaacggattcgttgacaccaaat 16692979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 20432417 - 20432373
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||| ||||||||||| |||| |||||||    
T  20432417 aagatccgttgacaccaggtatcaacggattcattgacaccaaat 20432373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 26589064 - 26589020
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||    
T  26589064 gatccgttgacaccaagtgtcaacggattcgttgactccaaatat 26589020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 42182659 - 42182615
Alignment:
Q  310 ccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||    
T  42182659 ccgttgacaccaggtgtcaagggattcgttgacaccaaatctcaa 42182615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 18174717 - 18174670
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  18174717 gatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaa 18174670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 351
Target Start/End: Original strand, 26588244 - 26588287
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||    
T  26588244 atccgttgacatcaggtgttaacggattcgttgacaccaaatat 26588287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 11007241 - 11007283
Alignment:
Q  312 gttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  11007241 gttgacaccaggtgtcaacggattcgttgacactaaatctcaa 11007283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11751116 - 11751074
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  11751116 gatccgttgacaccaggtgtcaacgaattcgttaacaccaaat 11751074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 18174104 - 18174146
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||| |||| ||||||||| |||||||    
T  18174104 gatccgttgacaccaggtgttaacgaattcgttgacaccaaat 18174146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 18820437 - 18820479
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| |||||| |||||||||||||||||||||| |||||||    
T  18820437 gatccattgacatcaggtgtcaacggattcgttgacaccaaat 18820479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 23857071 - 23857029
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||| |||||||||||||| ||||| |||||||    
T  23857071 gatccgttgacacctggtgtcaacggattggttgacaccaaat 23857029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 26752770 - 26752736
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    ||||||||||||||||||||||||| |||||||||    
T  26752770 gatccgttgacaccaggtgtcaacgaattcgttga 26752736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 27178692 - 27178650
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||||  |||| |||||||    
T  27178692 gatccgttgacaccaggtgtcaacggattgtttgacaccaaat 27178650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 34812903 - 34812861
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||||||||||| | |||||||    
T  34812903 gatccgttgacaccagttgtcaacggattcgttaacaccaaat 34812861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 40252027 - 40252069
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| || |||||||||||||||||||||||||| |||||||    
T  40252027 gatccattaacaccaggtgtcaacggattcgttgacaccaaat 40252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 42459047 - 42459105
Alignment:
Q  298 aagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 356  Q
    |||| ||| ||||| |||||||||||||||||| |||||||||| | ||||| ||||||    
T  42459047 aagagtcaggatccattgacaccaggtgtcaacagattcgttgacatcaaatctcaatc 42459105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 6584273 - 6584232
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  6584273 atccattgacaccaagtgtcaacggattcgttgacaccaaat 6584232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 23856638 - 23856687
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||| ||||||||||||||  |||| ||||||| ||||    
T  23856638 aagatccgttgacacctggtgtcaacggattgattgacaccaaatctcaa 23856687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 355
Target Start/End: Original strand, 29512376 - 29512424
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaat 355  Q
    |||||||||||||| |||||||||| ||| ||||| ||||||| |||||    
T  29512376 gatccgttgacacctggtgtcaacgaatttgttgacaccaaatctcaat 29512424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 361 - 586
Target Start/End: Original strand, 43928549 - 43928775
Alignment:
Q  361 ttttatttattgtgtatcctttt-ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  43928549 ttttatttattgtgtatcctttttttcaatcacacactattattgtttttaatgattacaaaacctcaattggaaacataatcctatcataattctcctt 43928648  T
Q  460 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaat 559  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  43928649 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacttcaaagatattattgtttagaatgaattggaaatattagttgttaaat 43928748  T
Q  560 gaaattccctctatgatctctgctcct 586  Q
    | ||||| ||||||||||||| |||||    
T  43928749 gcaattcactctatgatctcttctcct 43928775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 361 - 586
Target Start/End: Original strand, 45162063 - 45162292
Alignment:
Q  361 ttttatttattgtgtatcctttt----ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctc 456  Q
    |||||||||||||||||||||||    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45162063 ttttatttattgtgtatccttttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcctatcataattctc 45162162  T
Q  457 cttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgtta 556  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  45162163 cttattctcttgtctgcaaaattgaaatattctatagttgaataattaaaatacttcaaagatattattgtttagaatgaattggaaatattagttgtta 45162262  T
Q  557 aatgaaattccctctatgatctctgctcct 586  Q
    |||| ||||||||||||||||||| |||||    
T  45162263 aatgcaattccctctatgatctcttctcct 45162292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 361 - 586
Target Start/End: Complemental strand, 29188672 - 29188444
Alignment:
Q  361 ttttatttattgtgtatcctttttt---caatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcc 457  Q
    |||||||||||||||||| ||||||   |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  29188672 ttttatttattgtgtatcttttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcatatcataattctcc 29188573  T
Q  458 ttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaa 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  29188572 ttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacttcaaagatattattgtttaaaatgaattggaaatattagttgttaa 29188473  T
Q  558 atgaaattccctctatgatctctgctcct 586  Q
    ||| |||| |||||||||||||| |||||    
T  29188472 atgcaatttcctctatgatctcttctcct 29188444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 361 - 586
Target Start/End: Original strand, 25599116 - 25599333
Alignment:
Q  361 ttttatttattgtgtatcctttt-ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25599116 ttttatttattgtgtatcctttttttcaatcacacactattattatttttaatgattacaaaacctaaattggaaacataatcctatcataattctcctt 25599215  T
Q  460 attctcttgtctgcaaaa-ttgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaa 558  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||          ||| ||||||||||||||||||||||||||||    
T  25599216 attctcttgtctgcaaaatttgaaatactccatagttgaataattaaaatacttccaa----------ttttgaatgaattggaaatattagttgttaaa 25599305  T
Q  559 tgaaattccctctatgatctctgctcct 586  Q
    || |||||| |||||||| ||| |||||    
T  25599306 tgcaattccttctatgatatcttctcct 25599333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 361 - 558
Target Start/End: Complemental strand, 21156939 - 21156741
Alignment:
Q  361 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    |||||||||  ||||||||||| |||||||||||||| |||||| |||| ||||||||||| ||| |||||| |||||| |||  ||||| |  ||||||    
T  21156939 ttttatttacggtgtatcctttctttcaatcacacaccattattgttttcaatgattacaaaacccaaattgaaaacatgatcggatcatgaccctcctt 21156840  T
Q  460 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaa 558  Q
    ||||| |||| | ||||||| |||| |||||||  |||||||||||||||| || |||||||||||| ||| ||||||||| ||| |||||||| ||||    
T  21156839 attctattgttttcaaaattaaaatgctccataactgaataattaaaatacttccaagatattattgcttataatgaattgaaaacattagttggtaaa 21156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 549
Target Start/End: Original strand, 3688478 - 3688662
Alignment:
Q  361 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||  ||| |||||| || || |||    
T  3688478 ttttatttattgtgtatcctttctttcaatcacacactattattgtttttaatgattacaaaacccaaactggaaacaagatcgtatcatgatcct-ctt 3688576  T
Q  460 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatatta 549  Q
     ||||||||||  |||| || ||||||||||||  | ||||| ||| |||| || |||||||||| ||||||||| ||||| ||||||||    
T  3688577 cttctcttgtc--caaagttaaaatactccataactaaataa-taagatacttc-aagatattatcgtttagaattaattgaaaatatta 3688662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 3903387 - 3903324
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 369  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||||||||    
T  3903387 gatccgttgacaccaggtgtcaacggatccgttgacaccaaatatcaatcattcattttattta 3903324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 24719339 - 24719402
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 369  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||||    
T  24719339 gatccgttgacaccagatgtcaacggattcgttgacaccaaatatcaatcattcattttattta 24719402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 25599026 - 25599089
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 369  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||    
T  25599026 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaatcgttgatcttattta 25599089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 30661503 - 30661440
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 369  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  30661503 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 30661440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 37949609 - 37949672
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 369  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  37949609 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 37949672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 43065166 - 43065122
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  43065166 aagatccgttgacaccaggtgtcaacggattcgttgacaccaaat 43065122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 7668486 - 7668533
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  7668486 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 7668533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 19067641 - 19067704
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 369  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  19067641 gatccgttgacaccacgtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 19067704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 25342501 - 25342548
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  25342501 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 25342548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 25343307 - 25343354
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  25343307 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 25343354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 26636107 - 26636154
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  26636107 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 26636154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 46428191 - 46428238
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  46428191 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 46428238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 13785641 - 13785599
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  13785641 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 13785599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 19068443 - 19068381
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 368  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||    
T  19068443 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgttgattttattt 19068381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 30660597 - 30660639
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  30660597 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 30660639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37950515 - 37950473
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  37950515 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 37950473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 45099941 - 45099899
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  45099941 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 45099899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 3772574 - 3772527
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  3772574 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatctcaa 3772527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 24389664 - 24389617
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  24389664 gatccgttgacaccaggtgtcaacggattcattgacaccaaatctcaa 24389617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 26636908 - 26636861
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  26636908 gatccgttgacacaaggtgtcaacggattcgttgacaccaaatctcaa 26636861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 27948450 - 27948497
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  27948450 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 27948497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 41708605 - 41708660
Alignment:
Q  152 gaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgagcta 207  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||| || |||||||||    
T  41708605 gaaccccgatcataacatccgacctaacaattttgacatttttatcagttgagcta 41708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 1417612 - 1417654
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  1417612 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 1417654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 3029246 - 3029204
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  3029246 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 3029204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 31278202 - 31278160
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  31278202 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 31278160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37395547 - 37395505
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  37395547 gatccgttgacaccaggtgtcaacggattcgttaacaccaaat 37395505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 38226023 - 38225981
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  38226023 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 38225981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 47719752 - 47719710
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  47719752 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 47719710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 16664173 - 16664126
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||||||||| |||||| || |||| ||||    
T  16664173 gatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaa 16664126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 17638533 - 17638486
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||||||||| |||||| || |||| ||||    
T  17638533 gatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaa 17638486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 18977817 - 18977770
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  18977817 gatccattgacaccaggtgtcaacggattcgttaacaccaaatctcaa 18977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 21497031 - 21496984
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  21497031 gatccgttgacaacaggtgtcaacgaattcgttgacaccaaatctcaa 21496984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 25343287 - 25343240
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  25343287 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 25343240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 40273564 - 40273611
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  40273564 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 40273611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 45161973 - 45162020
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| ||||    
T  45161973 gatccattgacaccaggtgttaacggattcgttgacaccaaatctcaa 45162020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 3688388 - 3688430
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| | |||||||||||||||| |||||||    
T  3688388 gatccgttgacaccagatatcaacggattcgttgacaccaaat 3688430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 14305094 - 14305136
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||| |||||||||||||||| |||| |||||||    
T  14305094 gatccgttgacactaggtgtcaacggattcattgacaccaaat 14305136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 14686135 - 14686177
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||    
T  14686135 gatccgttgacaccaagtgtcaacggatttgttgacaccaaat 14686177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 23889858 - 23889812
Alignment:
Q  303 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||| |||| |||||||||| ||||||||| |||||||    
T  23889858 tcaagatccgttggcacctggtgtcaacgaattcgttgacaccaaat 23889812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 23901158 - 23901204
Alignment:
Q  303 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||| || ||| |||||||||| |||||||    
T  23901158 tcaagatccgttgacaccaggggttaacagattcgttgacaccaaat 23901204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 24453770 - 24453732
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  24453770 cgttgacaccaggtgtcaacggatttgttgacaccaaat 24453732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 46428865 - 46428831
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    ||||||||||||||||||||||||| |||||||||    
T  46428865 gatccgttgacaccaggtgtcaacgaattcgttga 46428831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 21157024 - 21156976
Alignment:
Q  306 agatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||||| ||||    
T  21157024 agatccgttgacaccagatgtcaacagattcattgacaccaaatttcaa 21156976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 23138734 - 23138682
Alignment:
Q  132 aagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattt 184  Q
    |||||||||| |||| |||  ||||||| |||||||||| |||||||||||||    
T  23138734 aagtggagataccgaggttcaaaccccagtcataacatccgacctaacaattt 23138682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 1e-95; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 361 - 575
Target Start/End: Original strand, 19311095 - 19311311
Alignment:
Q  361 ttttatttattgtgtatcctttt--ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcct 458  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  19311095 ttttatttattgtgtatccttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcctatcataattctcat 19311194  T
Q  459 tattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaa 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  19311195 tattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacttcaaagatattattgtttagaaagaattggaaatattagttgttaaa 19311294  T
Q  559 tgaaattccctctatga 575  Q
    || ||||||||||||||    
T  19311295 tgcaattccctctatga 19311311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 10171280 - 10171327
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  10171280 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 10171327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 26529560 - 26529513
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  26529560 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 26529513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 8488473 - 8488520
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  8488473 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 8488520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 10172013 - 10171966
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  10172013 gatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaa 10171966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 349
Target Start/End: Original strand, 19322990 - 19323029
Alignment:
Q  310 ccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  19322990 ccgttgacaccaggtgtcaacggattcgttgacaccaaat 19323029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 19323814 - 19323767
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  19323814 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 19323767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 26528827 - 26528874
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  26528827 gatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaa 26528874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 1366972 - 1367018
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatca 353  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||    
T  1366972 gatccgttgacttcaggtgtcaacggattcgttgacaccaaatatca 1367018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 19311870 - 19311832
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  19311870 cgttgacaccaggtgtcaacggattcgttgacaccaaat 19311832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 33436321 - 33436279
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  33436321 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 33436279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 12344898 - 12344945
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| |||||||||||||||||| |||||||||| ||||||| ||||    
T  12344898 gatccattgacaccaggtgtcaacagattcgttgataccaaatctcaa 12344945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 19311005 - 19311052
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||| |||||||| ||||| ||||||| ||||    
T  19311005 gatccgttgacaccaggtgttaacggatttgttgacaccaaatctcaa 19311052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 8489327 - 8489285
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  8489327 gatccgttgacaccaggtgtcaacgaattcgttaacaccaaat 8489285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 9441245 - 9441283
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  9441245 cgttgacaccaggtgtcaacggatccgttgacaccaaat 9441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 18227736 - 18227777
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  18227736 gatccgttgacaccag-tgtcaacggattcgttgacaccaaat 18227777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 33435344 - 33435386
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||| ||||| |||||||||||||| |||||||    
T  33435344 gatccgttgacacctggtgttaacggattcgttgacaccaaat 33435386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 9442026 - 9441985
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||| |||||||||||||||||||| | |||||||    
T  9442026 atccgttgacatcaggtgtcaacggattcgttcacaccaaat 9441985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 9442107 - 9442066
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||| |||||||||||||||||||| | |||||||    
T  9442107 atccgttgacatcaggtgtcaacggattcgttcacaccaaat 9442066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 2512442 - 2512486
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    |||||||||||||| | |||||||| ||||||||| |||||||||    
T  2512442 gatccgttgacacctgatgtcaacgaattcgttgacaccaaatat 2512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 5861889 - 5861937
Alignment:
Q  306 agatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| ||||||||||||||| |||| |||||||||| ||||||| ||||    
T  5861889 agattcgttgacaccaggtgccaacagattcgttgacaccaaatctcaa 5861937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 20834014 - 20833970
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    |||||||||||||||||||| |||| || |||||| |||||||||    
T  20834014 gatccgttgacaccaggtgttaacgaatccgttgacaccaaatat 20833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 25060820 - 25060852
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgtt 339  Q
    |||||||||||||||||||||||| ||||||||    
T  25060820 gatccgttgacaccaggtgtcaacagattcgtt 25060852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 4e-95; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 361 - 586
Target Start/End: Original strand, 24008463 - 24008692
Alignment:
Q  361 ttttatttattgtgtatc----cttttttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctc 456  Q
    ||||||||||||||||||     |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24008463 ttttatttattgtgtatctttttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcctatcataattctc 24008562  T
Q  457 cttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgtta 556  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  24008563 cttattctcttgtctgcaaaattgaaatactgcatagttgaataattaaaatacttcaaagatattattgtttaaaatgaattggaaatattagttgtta 24008662  T
Q  557 aatgaaattccctctatgatctctgctcct 586  Q
    |||| ||||||||||||||||||| |||||    
T  24008663 aatgcaattccctctatgatctcttctcct 24008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 501 - 586
Target Start/End: Complemental strand, 52107640 - 52107555
Alignment:
Q  501 attaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaatgaaattccctctatgatctctgctcct 586  Q
    |||||||||| || || |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  52107640 attaaaatacttccaaaatattattgtttagaacgaattggaaatattagttgttaaatgcaattccctatatgatctcttctcct 52107555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 53772812 - 53772861
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 356  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  53772812 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaatc 53772861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 52871301 - 52871345
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  52871301 aagatccgttgacaccaggtgtcaacggattcgttgacaccaaat 52871345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 47688527 - 47688480
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  47688527 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 47688480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 2444377 - 2444419
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  2444377 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 2444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 599349 - 599300
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 356  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  599349 gatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaatc 599300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 55976172 - 55976213
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  55976172 atccgttgacaccaggtgtcaacggattcgttgacaccaaat 55976213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 354
Target Start/End: Complemental strand, 16903687 - 16903644
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  16903687 cgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 16903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 19080390 - 19080437
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  19080390 gatctgttgacaccaggtgtcaacggattcgttgacaccaaatttcaa 19080437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 20774228 - 20774181
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  20774228 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 20774181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 26147080 - 26147033
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  26147080 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 26147033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 30573757 - 30573710
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  30573757 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 30573710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 47785847 - 47785800
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  47785847 gatctgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 47785800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 53732440 - 53732487
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  53732440 gatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaa 53732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 55001489 - 55001454
Alignment:
Q  306 agatccgttgacaccaggtgtcaacggattcgttga 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  55001489 agatccgttgacaccaggtgtcaacggattcgttga 55001454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 3654563 - 3654521
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  3654563 gatccgttgacgccaggtgtcaacggattcgttgacaccaaat 3654521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 8248568 - 8248526
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  8248568 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 8248526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 8266233 - 8266191
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  8266233 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 8266191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 13849448 - 13849366
Alignment:
Q  125 acacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgagcta 207  Q
    ||||||||||||||| || ||  ||| ||||||| ||||  || |||||||||||||||| ||||| |||||| |||||||||    
T  13849448 acacacaaagtggaggtgtcggggttcgaaccccgatcaagacgtctgacctaacaatttcgacatttttgtcagttgagcta 13849366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 19550291 - 19550333
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  19550291 gatcccttgacaccaggtgtcaacggattcgttgacaccaaat 19550333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 31329765 - 31329723
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  31329765 gatccgttgacaccaggtgtcaacggattcgttaacaccaaat 31329723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 42882729 - 42882687
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  42882729 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 42882687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 45921043 - 45920985
Alignment:
Q  360 attttatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 417  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| | || ||||||||    
T  45921043 attttatttattttgtatcctctttttcaatcacacactattattgtattcaatgatta 45920985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 53773634 - 53773592
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  53773634 gatccgttgacatcaggtgtcaacggattcgttgacaccaaat 53773592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 55001397 - 55001343
Alignment:
Q  364 tatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 417  Q
    ||||||||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  55001397 tatttattgtgtatcctctttttcaatcacacactattattgtattcaatgatta 55001343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 450
Target Start/End: Original strand, 5046084 - 5046169
Alignment:
Q  366 tttattgtgtatccttttttca-atcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcata 450  Q
    ||||||||||||||||| ||   |||||||||||||||| | ||||||||||| || ||  ||||||||||||| ||| |||||||    
T  5046084 tttattgtgtatcctttcttgtgatcacacactattattgtatttaatgattataaaactcaaattggaaacatgatcttatcata 5046169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 53733773 - 53733732
Alignment:
Q  313 ttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||| ||||||| ||||    
T  53733773 ttgacaccaggtgtcaacggattcgttgacaccaaatttcaa 53733732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 9365862 - 9365822
Alignment:
Q  309 tccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  9365862 tccgttgacaccaggtgtcaacggattcattgacaccaaat 9365822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 24374785 - 24374841
Alignment:
Q  298 aagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| ||| |||||||||||||||| |||||||| ||||||||| ||||||| ||||    
T  24374785 aagagtcaggatccgttgacaccagctgtcaacgaattcgttgacaccaaatctcaa 24374841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 12107168 - 12107223
Alignment:
Q  148 gtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttga 203  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| || |||||    
T  12107168 gtttgaactccaatcataacatccgacctaacaatttcgacatttttatcagttga 12107223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 346
Target Start/End: Complemental strand, 16903712 - 16903677
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaacca 346  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16903712 cgttgacaccaggtgtcaacggattcgttgacacca 16903677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 56262483 - 56262530
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  56262483 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 56262530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 2446209 - 2446167
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||| |||||||| | |||||||    
T  2446209 gatccgttgacaccaggtgtcaacagattcgttaacaccaaat 2446167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 5046530 - 5046488
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  5046530 gatccgttgacaccaggtatcaacagattcgttgacaccaaat 5046488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 7841549 - 7841591
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| ||||||| |||||||||||||| |||||||    
T  7841549 gatccgttgacatcaggtgttaacggattcgttgacaccaaat 7841591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 8247701 - 8247735
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    |||||||||||||| ||||||||||||||||||||    
T  8247701 gatccgttgacacctggtgtcaacggattcgttga 8247735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 8265366 - 8265400
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    |||||||||||||| ||||||||||||||||||||    
T  8265366 gatccgttgacacctggtgtcaacggattcgttga 8265400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 24158868 - 24158826
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  24158868 gatccattgacaccaggtgtcaacagattcgttgacaccaaat 24158826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 24551971 - 24551929
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||    
T  24551971 gatccattgacaccaggtgtcaacggatttgttgacaccaaat 24551929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 26159669 - 26159627
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  26159669 gatccgttgacatcaagtgtcaacggattcgttgacaccaaat 26159627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32089661 - 32089619
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| |||||||| ||||||||| |||||||    
T  32089661 gatccgttgacaccagatgtcaacgaattcgttgataccaaat 32089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 43146692 - 43146654
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  43146692 cgttgacaccaggtgtcaacggattccttgacaccaaat 43146654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 44469497 - 44469539
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||| |||||||||||||||||| ||||||||| |||||||    
T  44469497 gatccgatgacaccaggtgtcaacgaattcgttgacaccaaat 44469539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 47687914 - 47687956
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||| |||| ||||||||| |||||||    
T  47687914 gatccgttgacaccaggtgttaacgaattcgttgacaccaaat 47687956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 50184433 - 50184475
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||| | |||||||||||||||||||||| |||||||    
T  50184433 gatccgttgatatcaggtgtcaacggattcgttgacaccaaat 50184475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 53147876 - 53147918
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  53147876 gatccattgacaccagatgtcaacggattcgttgacaccaaat 53147918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 55000692 - 55000734
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  55000692 gatccattgacaccagatgtcaacggattcgttgacaccaaat 55000734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 349
Target Start/End: Complemental strand, 55976995 - 55976961
Alignment:
Q  315 gacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||| |||||||    
T  55976995 gacaccaggtgtcaacggattcgttgacaccaaat 55976961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 12919591 - 12919632
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| |||||| | |||||||    
T  12919591 atccgttgacaccaggtgtcaacgggttcgttaacaccaaat 12919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 40495100 - 40495141
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaa 348  Q
    ||||||||||||||||||||||||  ||||||||| ||||||    
T  40495100 gatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 40495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 9696306 - 9696398
Alignment:
Q  103 gataaagtcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttgacatgtttg 195  Q
    |||||| ||||||||||   | ||||| ||||||||| | |||| ||| ||||||| |||||||| |  ||||||||||||| ||||| ||||    
T  9696306 gataaattcatcataaacttacacacataaagtggaggtaccgaggttcgaaccccgatcataacgttcgacctaacaatttcgacatttttg 9696398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 46855915 - 46855851
Alignment:
Q  149 tttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgagctaaaactt 213  Q
    ||||||||||  |||||  ||||||||| ||||||||||||| |||| | |||||||||| ||||    
T  46855915 tttgaaccccgttcatagtatctgaccttacaattttgacatttttggcagttgagctaacactt 46855851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 364 - 579
Target Start/End: Original strand, 42007608 - 42007822
Alignment:
Q  364 tatttattgtgtatccttttttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctccttattc 463  Q
    ||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||| || |||||||||||| || || ||||||||||||| ||||||    
T  42007608 tatttattgtgtatcattttttcaatcacacattattattgattttaatgattacaaaacttaaattggaaactta-tcgtatcataattctctttattc 42007706  T
Q  464 tcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaatgaaa 563  Q
    ||| || ||||||| | ||||||||||||  || ||||||||||||| || |||||||||||||||| |||||||   |||||||||||| |||||| ||    
T  42007707 tctggtttgcaaaaataaaatactccataactggataattaaaatacttccaagatattattgtttaaaatgaatgaaaaatattagttggtaaatgcaa 42007806  T
Q  564 ttccctctatgatctc 579  Q
    ||||||||||||||||    
T  42007807 ttccctctatgatctc 42007822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 361 - 586
Target Start/End: Complemental strand, 26395348 - 26395135
Alignment:
Q  361 ttttatttattgtgtatccttttttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctta 460  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||   ||| |||||| |||||| |||||||||||||||||        
T  26395348 ttttatttattgtgtatcttttttttaatcacacactattattgtttttaatgattaccgtacccaaattgaaaacatgatcctatcataattctc---- 26395253  T
Q  461 ttctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaatg 560  Q
         |||||||||||||||||||||||||||  | |||||||||||||| |  ||||||||||| ||||||||||||||||||||| |    |||||||    
T  26395252 -----ttgtctgcaaaattgaaatactccataactaaataattaaaatacttgcaagatattattttttagaatgaattggaaatatca---attaaatg 26395161  T
Q  561 aaattccctctatgatctctgctcct 586  Q
     ||||| ||||||||||||| |||||    
T  26395160 caattctctctatgatctcttctcct 26395135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 361 - 510
Target Start/End: Complemental strand, 25929386 - 25929236
Alignment:
Q  361 ttttatttattgtgtatcctttttt-caatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||| |||||| |||||| ||| |||||||||||| |||    
T  25929386 ttttatttattgtgtatcttttttttcaatcacacactattattgtttttaatgattacaaaacccaaattgaaaacatgatcatatcataattcttctt 25929287  T
Q  460 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatac 510  Q
    ||||| |||||||||||||| ||||||||||||  ||||||||||||||||    
T  25929286 attcttttgtctgcaaaattaaaatactccataactgaataattaaaatac 25929236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 549
Target Start/End: Complemental strand, 17725611 - 17725427
Alignment:
Q  361 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||  ||| |||||| || || |||    
T  17725611 ttttatttattgtgtatcctttctttcaatcacacactattattgtttttaatgattacaaaacccaaactggaaacaagatcgtatcatgatcct-ctt 17725513  T
Q  460 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatatta 549  Q
     ||||||||||  |||| || ||||||||||||  | ||||| ||| |||| || |||||||||| ||||||||| ||||| ||||||||    
T  17725512 cttctcttgtc--caaagttaaaatactccataaataaataa-taagatacttc-aagatattatcgtttagaattaattgaaaatatta 17725427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 468
Target Start/End: Complemental strand, 28930814 - 28930705
Alignment:
Q  361 ttttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatg-attacaacacctaaattggaaacataatcctatcataattctcct 458  Q
    |||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||| ||  ||||||||||||| ||| |||||| || || ||    
T  28930814 ttttatttattgtgtacccttcttttcaatcacacactattattgtttttaatgaattacaaaactgaaattggaaacatgatcatatcatgatcctact 28930715  T
Q  459 tattctcttg 468  Q
     |||||||||    
T  28930714 cattctcttg 28930705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 38576349 - 38576302
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38576349 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 38576302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 26654429 - 26654383
Alignment:
Q  303 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26654429 tcaagatccgttgacaccaggtgtcaatggattcgttgacaccaaat 26654383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 41974645 - 41974687
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  41974645 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 41974687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 8372918 - 8372967
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 356  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  8372918 gatccgttgacacctggtgtcaacggattcgttgacaccaaatattaatc 8372967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 8373740 - 8373696
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||    
T  8373740 gatccgttgacaccaagtgtcaacggattcgttgacaccaaatat 8373696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 3165169 - 3165127
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  3165169 gatccgttgacatcaggtgtcaacggattcgttgacaccaaat 3165127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32414571 - 32414529
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  32414571 gatctgttgacaccaggtgtcaacggattcgttgacaccaaat 32414529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 42650286 - 42650201
Alignment:
Q  98 gaaatgataaagtcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattt 184  Q
    |||||||||||||||| |||||  |||||||| || |||||| | |||| ||| |||||||||||||  |||| |||||||||||||    
T  42650286 gaaatgataaagtcattataaactcatacacataa-gtggaggtaccgaggttcgaaccccaatcatggcatccgacctaacaattt 42650201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 9197101 - 9197142
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  9197101 atccgttgacaccaggtgtcaacgaattcgttgacaccaaat 9197142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 37732831 - 37732872
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaa 348  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  37732831 gatccgttgacacctggtgtcaacggattcgttgacaccaaa 37732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 28929848 - 28929892
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||| |||||||||| |||||||||||||||||| |||||||    
T  28929848 aagatccattgacaccagatgtcaacggattcgttgacaccaaat 28929892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 45967 - 45920
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||| ||||||||||||| | ||||||||| ||||||||||||    
T  45967 gatccgttggcaccaggtgtcaatgaattcgttgacaccaaatatcaa 45920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 31602021 - 31602068
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| |||||||||||||||||||| ||||||||| ||||||| ||||    
T  31602021 gatcggttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 31602068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 3044012 - 3043970
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||    
T  3044012 gatccgtcgacaccaggtgtcaacgaattcgttgacaccaaat 3043970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 9197867 - 9197825
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||    
T  9197867 gatccgttgacaccaagtgtcaacgaattcgttgacaccaaat 9197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 11686231 - 11686273
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||    
T  11686231 gatccattggcaccaggtgtcaacggattcgttgacaccaaat 11686273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 14825648 - 14825682
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    ||||||||||||| |||||||||||||||||||||    
T  14825648 gatccgttgacactaggtgtcaacggattcgttga 14825682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 17725701 - 17725659
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| |||||||||||| ||||||||| |||||||    
T  17725701 gatccgttgacagcaggtgtcaacgaattcgttgacaccaaat 17725659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 22320379 - 22320421
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||  ||||||||||||||||||||||| |||||||    
T  22320379 gatccgttgatgccaggtgtcaacggattcgttgacaccaaat 22320421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 26652298 - 26652340
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  26652298 gatccgttgacaccaggtgtcaacgaattcgttaacaccaaat 26652340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 27441471 - 27441505
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    ||||||||||||||||||||||||| |||||||||    
T  27441471 gatccgttgacaccaggtgtcaacgaattcgttga 27441505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 31641516 - 31641558
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  31641516 gatccattgacaccaggtgtcaatggattcgttgacaccaaat 31641558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 39860115 - 39860159
Alignment:
Q  307 gatccgttgacaccaggtgtcaac--ggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||    
T  39860115 gatccgttgacaccaggtgtcaacaaggattcgttgacaccaaat 39860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 361 - 478
Target Start/End: Original strand, 13476296 - 13476414
Alignment:
Q  361 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    |||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||| ||  |||||||||| || ||| |||| | |||||||||    
T  13476296 ttttatttattgtgtatcctttctttcaaccacacactattattgttttaaatgattacaaaactcaaattggaaagatgatcgtatcttgattctcctt 13476395  T
Q  460 attctcttgtctgcaaaat 478  Q
    ||||| |||||||||||||    
T  13476396 attcttttgtctgcaaaat 13476414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 468
Target Start/End: Complemental strand, 45081361 - 45081252
Alignment:
Q  361 ttttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatga-ttacaacacctaaattggaaacataatcctatcataattctcct 458  Q
    |||| ||||||||||| |||| |||||||||||||| ||||||| |||| ||||| |||||| ||| ||||||||||||| ||| |||||| || || ||    
T  45081361 ttttttttattgtgtacccttcttttcaatcacacattattattgttttcaatgatttacaaaaccgaaattggaaacatgatcatatcatgatcctact 45081262  T
Q  459 tattctcttg 468  Q
     |||||||||    
T  45081261 cattctcttg 45081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 265146 - 265099
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  265146 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 265099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 17603173 - 17603215
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  17603173 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 17603215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 21727577 - 21727535
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  21727577 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 21727535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 360 - 468
Target Start/End: Complemental strand, 46150689 - 46150580
Alignment:
Q  360 attttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatgatt-acaacacctaaattggaaacataatcctatcataattctcc 457  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||| |||  ||||||| |||| ||| ||||||||||||| ||| |||||| || || |    
T  46150689 attttttttattgtgtacccttcttttcaatcacacactattattgtttc-aatgatttacaaaaccgaaattggaaacatgatcatatcatgatcctac 46150591  T
Q  458 ttattctcttg 468  Q
    | |||||||||    
T  46150590 tcattctcttg 46150580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 48648208 - 48648250
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  48648208 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 48648250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 14871148 - 14871200
Alignment:
Q  297 taagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  14871148 taagagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 14871200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 40872858 - 40872814
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  40872858 aagatccgttgacaccaggtgtcaacggattcattgacaccaaat 40872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 354
Target Start/End: Original strand, 17605715 - 17605758
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  17605715 cgttgacaccaggtgtcaacggattcgttgacaccaaatttcaa 17605758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 31974656 - 31974703
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  31974656 gatccgttgacaccaagtgtcaacggattcgttgacaccaaatctcaa 31974703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 46150777 - 46150730
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  46150777 gatccgttgacactaggtgtcaacggattcgttgacaccaaatctcaa 46150730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 981673 - 981719
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  981673 atccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 981719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 37987238 - 37987280
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||| ||||||||||| |||||||    
T  37987238 gatccgttgacaccaggtgtcaatggattcgttgacaccaaat 37987280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 51827546 - 51827500
Alignment:
Q  303 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||    
T  51827546 tcaagatccgttgacacctggtgtcaacggattcgttgtcaccaaat 51827500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 55373750 - 55373712
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  55373750 cgttgacaccaggtgtcaacggattcgttgacaccaaat 55373712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 11203248 - 11203207
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  11203248 atccgttgacaccaggtgtcaacaaattcgttgaaaccaaat 11203207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 20212986 - 20213027
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  20212986 atccgttgacaccaggtgtcaacgaattcgttgacaccaaat 20213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 31115647 - 31115598
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 356  Q
    ||||||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  31115647 gatccgttgacactaggtgtcaacagattcgttgacaccaaatctcaatc 31115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 44699861 - 44699824
Alignment:
Q  314 tgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    |||||||||||||||||||||||||||| |||||||||    
T  44699861 tgacaccaggtgtcaacggattcgttgacaccaaatat 44699824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 48413329 - 48413366
Alignment:
Q  312 gttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||||| |||||||    
T  48413329 gttgacaccaggtgtcaacggattcgttgacaccaaat 48413366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 52282459 - 52282418
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  52282459 atccgttgacaccaggtgtcaacggattcattgacaccaaat 52282418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 17604002 - 17603967
Alignment:
Q  314 tgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||| |||||||    
T  17604002 tgacaccaggtgtcaacggattcgttgacaccaaat 17603967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 37520609 - 37520562
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||| |||||||||||||| ||||||||| ||||||| ||||    
T  37520609 gatccgttgataccaggtgtcaacgaattcgttgacaccaaatctcaa 37520562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 354
Target Start/End: Original strand, 41458042 - 41458085
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||    
T  41458042 cgttgataccaggtgtcaacggattcgttgacaccaaatctcaa 41458085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 45081451 - 45081404
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  45081451 gatccgttgacacctagtgtcaacggattcgttgacaccaaatctcaa 45081404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 48507080 - 48507033
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  48507080 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 48507033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 10847961 - 10847915
Alignment:
Q  303 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| ||||||||||||||| ||||| |||| |||||||    
T  10847961 tcaagatccgttaacaccaggtgtcaacagattcattgacaccaaat 10847915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 13477062 - 13477104
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| |||| |||| |||||||    
T  13477062 gatccgttgacaccaggtgtcaacgaattcattgacaccaaat 13477104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 20213579 - 20213537
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||    
T  20213579 gatccgttgacaccaggtgtcgacgaattcgttgacaccaaat 20213537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37988266 - 37988224
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||    
T  37988266 gatccattgacaccaggtgtcaacgaattcgttgacaccaaat 37988224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 46149634 - 46149676
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  46149634 gatccattgacaccaggtgtcaatggattcgttgacaccaaat 46149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 48649221 - 48649179
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  48649221 gatccattgacaccaggtgtcaacagattcgttgacaccaaat 48649179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 48765118 - 48765076
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  48765118 gatccattgacaccaggtgtcaatggattcgttgacaccaaat 48765076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 51469327 - 51469285
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  51469327 gatccgttgacatcaagtgtcaacggattcgttgacaccaaat 51469285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 52605531 - 52605489
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||    
T  52605531 gatccgttgacaccaggtgtcaacgaattcgatgataccaaat 52605489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 54458713 - 54458671
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||| |||||||||||||| ||||| |||||||    
T  54458713 gatccgttgacacctggtgtcaacggattggttgacaccaaat 54458671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 13477820 - 13477779
Alignment:
Q  313 ttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||    
T  13477820 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 13477779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 33277551 - 33277510
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||| ||||||| | |||||||    
T  33277551 atccgttgacaccaggtgtcaacgaattcgttaacaccaaat 33277510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 37928882 - 37928842
Alignment:
Q  173 acctaacaattttgacatgtttgtcggttgagctaaaactt 213  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  37928882 acctaacaattttgacatttttgtcagttgagctaagactt 37928842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 361 - 478
Target Start/End: Original strand, 4433183 - 4433301
Alignment:
Q  361 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 459  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||||||| ||  |||||||||| || ||| |||| | |||||||||    
T  4433183 ttttatttattgtgcatcctttctttcaatcacacactattattgttttaaatgattacaaaactcaaattggaaagatgatcgtatcttgattctcctt 4433282  T
Q  460 attctcttgtctgcaaaat 478  Q
    ||||| |||||||||||||    
T  4433283 attcttttgtctgcaaaat 4433301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 444
Target Start/End: Complemental strand, 4134752 - 4134668
Alignment:
Q  361 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcct 444  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||| |||||    
T  4134752 ttttatttattgtgtatcatttctttcaatcacacactattattgtttttaatgattacaaaacccaaattagaaacattatcct 4134668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 34309278 - 34309215
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 369  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  34309278 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 34309215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 4433895 - 4433833
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatcttgattttattta 369  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||| || |||| |||||    
T  4433895 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaatgtttatttcattta 4433833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 4439254 - 4439192
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatcttgattttattta 369  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||| || |||| |||||    
T  4439254 gatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaatgtttatttcattta 4439192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 25469134 - 25469092
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  25469134 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 25469092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 27256760 - 27256698
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 368  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||    
T  27256760 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgttgattttattt 27256698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 34308477 - 34308539
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 368  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||    
T  34308477 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgttgattttattt 34308539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 49680815 - 49680857
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  49680815 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 49680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 30663353 - 30663409
Alignment:
Q  298 aagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| ||| |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  30663353 aagagtcaggatccgttgacaccaggtatcaacggattcgttgacaccaaatctcaa 30663409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 45818023 - 45818067
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  45818023 aagatccgttgacaccaggtgtcaacggattcattgacaccaaat 45818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 46391914 - 46391870
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  46391914 gatccgttgacaccaggtgtcaacggattcgttgacatcaaatat 46391870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 10121600 - 10121553
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  10121600 gatccgttgacaccaggtgtcaacggattggttgacaccaaatctcaa 10121553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 13262837 - 13262884
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  13262837 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 13262884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 13263564 - 13263517
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  13263564 gatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaa 13263517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 30664024 - 30663977
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  30664024 gatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaa 30663977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 30932843 - 30932796
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  30932843 gatccgttgacaccaggtgtcaacggattcgttggcaccaaatctcaa 30932796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 7559247 - 7559205
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  7559247 gatccgttgacaccaggtgtcaacggatccgttgacaccaaat 7559205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 10120787 - 10120829
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  10120787 gatccgttgacaccaggtgtcaacggattggttgacaccaaat 10120829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 11548804 - 11548866
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 368  Q
    |||||||||||||||||||||||| |||||||||| || |||| |||||| || |||||||||    
T  11548804 gatccgttgacaccaggtgtcaacagattcgttgacactaaatctcaatcatttattttattt 11548866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 17171935 - 17171977
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  17171935 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 17171977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 17172710 - 17172676
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    |||||||||||||||||||||||||||||||||||    
T  17172710 gatccgttgacaccaggtgtcaacggattcgttga 17172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 19172623 - 19172581
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  19172623 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 19172581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 24991974 - 24992016
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  24991974 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 24992016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 47967866 - 47967908
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  47967866 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 47967908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 8988598 - 8988549
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||| ||||    
T  8988598 aagatccgctgacaccaggtgtcaacggattccttgacaccaaatctcaa 8988549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 46812237 - 46812188
Alignment:
Q  305 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||    
T  46812237 aagattcgttaacaccaggtgtcaacggattcgttgacaccaaatctcaa 46812188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 8050550 - 8050486
Alignment:
Q  149 tttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgagctaaaactt 213  Q
    ||||||||||  |||||||||  | ||||||||||| ||||| ||||||||||||||||| ||||    
T  8050550 tttgaaccccggtcataacattcggcctaacaatttcgacatttttgtcggttgagctaagactt 8050486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 16939508 - 16939476
Alignment:
Q  152 gaaccccaatcataacatctgacctaacaattt 184  Q
    |||||||||||||||||||||||||||||||||    
T  16939508 gaaccccaatcataacatctgacctaacaattt 16939476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 168894 - 168941
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||| ||||||| |||| ||||||| ||||    
T  168894 gatccgttgacaccaggtgtcagcggattcattgacaccaaatctcaa 168941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 7406249 - 7406296
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||| |||| ||||||||| ||||||| ||||    
T  7406249 gatccgttgacaccaggtgttaacgaattcgttgacaccaaatctcaa 7406296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 8987794 - 8987841
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| ||||||| |||||||||||||||||||||| ||||||| ||||    
T  8987794 gatcggttgacatcaggtgtcaacggattcgttgacaccaaatctcaa 8987841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 25468514 - 25468561
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  25468514 gatccattgacaccaggtgtcaacggattcattgacaccaaatctcaa 25468561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 28181537 - 28181584
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||| |||||||||| ||||||||| ||||||| ||||    
T  28181537 gatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaa 28181584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 7558453 - 7558495
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||    
T  7558453 gatccgttgacaccaagtgtcaacggatttgttgacaccaaat 7558495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11704856 - 11704814
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||    
T  11704856 gatccattgacaccaagtgtcaacggattcgttgacaccaaat 11704814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 13142715 - 13142681
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttga 341  Q
    ||||| |||||||||||||||||||||||||||||    
T  13142715 gatcccttgacaccaggtgtcaacggattcgttga 13142681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 19171782 - 19171824
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  19171782 gatccgttgacatcaagtgtcaacggattcgttgacaccaaat 19171824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 28182120 - 28182078
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||| ||||||||||||||||||||||||| |||| |||||||    
T  28182120 gatctgttgacaccaggtgtcaacggattctttgacaccaaat 28182078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 36390415 - 36390373
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| || |||||| |||||||    
T  36390415 gatccgttgacaccaggtgtcaacgaatccgttgacaccaaat 36390373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37577693 - 37577651
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| |||| |||||||||||||||||||||||| |||||||    
T  37577693 gatccattgataccaggtgtcaacggattcgttgacaccaaat 37577651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37853183 - 37853141
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||| ||| |||||||||||||||||||||| |||||||    
T  37853183 gatccgttaacatcaggtgtcaacggattcgttgacaccaaat 37853141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 44836123 - 44836216
Alignment:
Q  94 agatgaaatgataaagtcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttga 187  Q
    |||||| |||| |||| |||||||||  || ||| | ||||||||||| |||  ||| ||||||| ||||| || || ||||||||||||||||    
T  44836123 agatgagatgacaaagccatcataaactcacacatataaagtggagataccggggttcgaaccccgatcatgacgtccgacctaacaattttga 44836216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 30931898 - 30931934
Alignment:
Q  313 ttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||| | |||||||    
T  30931898 ttgacaccaggtgtcaacggattcgttaacaccaaat 30931934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 50905550 - 50905438
Alignment:
Q  101 atgataaagtcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggt 200  Q
    |||| |||||||| |||||  || ||||||||||| ||| | |||| ||| |||| |||||||| |  | || |||||||||||| |||| ||| || ||    
T  50905550 atgacaaagtcattataaactcacacacacaaagtagaggtaccgaggttcgaactccaatcatgatgtttggcctaacaattttaacatttttatcagt 50905451  T
Q  201 tgagctaaaactt 213  Q
    |||||||| ||||    
T  50905450 tgagctaagactt 50905438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 52427278 - 52427222
Alignment:
Q  148 gtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgag 204  Q
    ||||||||||| |||||| |||||| |||||||||||||  || |||||| ||||||    
T  52427278 gtttgaaccccgatcatagcatctggcctaacaattttggtatttttgtcagttgag 52427222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 39901 - 39949
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 356  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39901 atccgttgacaccaggtgtcaacggattcgttgacaccaaatattaatc 39949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 234705 - 234749
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  234705 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatat 234749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 237868 - 237824
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  237868 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatat 237824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 19359708 - 19359752
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  19359708 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatat 19359752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 6476838 - 6476791
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  6476838 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 6476791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 29046033 - 29046080
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  29046033 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 29046080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 7632099 - 7632141
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  7632099 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 7632141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 9408026 - 9407968
Alignment:
Q  360 attttatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 417  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  9408026 attttatttattgtgtatcctctttttcaatcacacactattattgtattcaatgatta 9407968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 19128774 - 19128816
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  19128774 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 19128816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 19128861 - 19128919
Alignment:
Q  360 attttatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 417  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  19128861 attttatttattgtgtatcctctttttcaatcacacactattattgtattcaatgatta 19128919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 19360523 - 19360479
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 351  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  19360523 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatat 19360479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 22212936 - 22212876
Alignment:
Q  361 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaa 420  Q
    |||||||||||||||||| ||| ||||||| |||||| |||||| ||||||||||||||||    
T  22212936 ttttatttattgtgtatcatttctttcaattacacacgattattgtttttaatgattacaa 22212876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 235596 - 235643
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  235596 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 235643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 346
Target Start/End: Complemental strand, 1283572 - 1283533
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaacca 346  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1283572 gatccgttgacaccaggtgtcaacggattcgttgacacca 1283533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 346
Target Start/End: Original strand, 10554526 - 10554565
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaacca 346  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  10554526 gatccgttgacaccaggtgtcaacggattcgttgacacca 10554565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 354
Target Start/End: Original strand, 10554555 - 10554598
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  10554555 cgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 10554598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 27364534 - 27364487
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  27364534 gatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaa 27364487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 28705926 - 28705879
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  28705926 gatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaa 28705879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 1281840 - 1281882
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  1281840 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 1281882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 1283543 - 1283505
Alignment:
Q  311 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  1283543 cgttgacaccaggtgtcaacggattcgttgacaccaaat 1283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 1554130 - 1554088
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  1554130 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 1554088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 14478925 - 14478967
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  14478925 gatccgttgacatcaggtgtcaacggattcgttgacaccaaat 14478967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 25858214 - 25858256
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  25858214 gatccgttgacactaggtgtcaacggattcgttgacaccaaat 25858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 28705170 - 28705216
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||    
T  28705170 atccgttgacaccaggtgtcaacggattcgtttacaccaaatctcaa 28705216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 29087929 - 29087971
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  29087929 gatccgttgacaccaggtgtcaacggattcattgacaccaaat 29087971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 236976 - 236929
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  236976 gatccattgacaccaggtgtcaacggattcgtagacaccaaatctcaa 236929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 4084884 - 4084931
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||||| |||||||||| ||||||||| ||||||| ||||    
T  4084884 gatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaa 4084931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 17071228 - 17071275
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  17071228 gatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaa 17071275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 22798904 - 22798947
Alignment:
Q  306 agatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||| | |||||||||||||||||||||| |||||||    
T  22798904 agatccgttgatatcaggtgtcaacggattcgttgacaccaaat 22798947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 34600265 - 34600312
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  34600265 gatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaa 34600312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 34709089 - 34709042
Alignment:
Q  302 ctcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||| |||| |||||||||||||||||||||||||||||  |||||||    
T  34709089 ctcaggatctgttgacaccaggtgtcaacggattcgttggcaccaaat 34709042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 38056798 - 38056845
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| ||||    
T  38056798 gatctgttgacaccaggtgtcaacggattggttgacaccaaatttcaa 38056845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 17071841 - 17071799
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||| |||| ||||||||| |||||||    
T  17071841 gatccgttgacaccaggtgttaacgaattcgttgacaccaaat 17071799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 20854952 - 20854910
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||| || ||||||||||| |||||||    
T  20854952 gatccgttgacaccaggtgttaatggattcgttgacaccaaat 20854910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 36038699 - 36038741
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||| |||||||||||||| | |||||||    
T  36038699 gatccgttgacaccaggtatcaacggattcgttaacaccaaat 36038741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 38057642 - 38057600
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||    
T  38057642 gatccgttgacactaggtgtcaacggattggttgacaccaaat 38057600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 43510236 - 43510278
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||| |||||||| | |||||||    
T  43510236 gatccgttgacaccaggtgtcaacagattcgttaacaccaaat 43510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 22799806 - 22799765
Alignment:
Q  308 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||| | ||||||||| |||||||    
T  22799806 atccgttgacaccaggtgtcaatgaattcgttgacaccaaat 22799765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 27363812 - 27363779
Alignment:
Q  316 acaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||||||||||||| |||||||    
T  27363812 acaccaggtgtcaacggattcgttgacaccaaat 27363779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 26596 - 26638
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  26596 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 26638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 22118 - 22076
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  22118 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 22076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 15900 - 15859
Alignment:
Q  313 ttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||    
T  15900 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 15859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 1896 - 1942
Alignment:
Q  303 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||    
T  1896 tcaagatccgttgacagcagatgtcaacggattcgttgacaccaaat 1942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 5427 - 5385
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  5427 gatccgttgacaccaggtgtcaacggatttgttgacaccaaat 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 755 - 802
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| |||||||||||| |||||||||||||||| ||||||| ||||    
T  755 gatccattgacaccaggtttcaacggattcgttgacaccaaatctcaa 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 23776 - 23729
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 354  Q
    ||||| |||||||||| |||||||||||||||||| ||||||| ||||    
T  23776 gatccattgacaccagttgtcaacggattcgttgacaccaaatctcaa 23729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 1591 - 1633
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 349  Q
    |||| |||||||||||||||||||| ||||||||| |||||||    
T  1591 gatcggttgacaccaggtgtcaacgaattcgttgacaccaaat 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 6932 - 6891
Alignment:
Q  307 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaa 348  Q
    ||||||||||||||||||||||||  ||||||||| ||||||    
T  6932 gatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 341
Target Start/End: Original strand, 181019 - 181048
Alignment:
Q  312 gttgacaccaggtgtcaacggattcgttga 341  Q
    ||||||||||||||||||||||||||||||    
T  181019 gttgacaccaggtgtcaacggattcgttga 181048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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