View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19407_low_11 (Length: 355)
Name: NF19407_low_11
Description: NF19407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19407_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 2400849 - 2401176
Alignment:
| Q |
1 |
attattgttcctagctataacatatgtaatagctatatatagaggattgagacgacacaagctatatatatagtggaaggagaatggaaggactagaaaa |
100 |
Q |
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| T |
2400849 |
attattgttcctagctataacatatgtaatagctatatatagaggattgagacgacacaagctatatatatagtggaaggagaatggaaggactagaaaa |
2400948 |
T |
|
| Q |
101 |
agaagtgtaagatatgatatatggtatgcaaaaatggagaaaggggtgaaagagatataaggaaggaaaaggatggaccacaatagagagagtacaataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
2400949 |
agaagtgtaagatatgatatatggtatgcaaaaatggagaaaggggtgaaagagatataaggaaggaaaaggatggaccacaatagagagagtacagtaa |
2401048 |
T |
|
| Q |
201 |
ggtagacaacaatgttggaagggaagaaaacatttgggcaa-ttgctttggaaaaggagtggactaggctttcctagctatgaa---ttttagagaggag |
296 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||| |
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| T |
2401049 |
ggtagacaacaatgttggaagggaagaaaacatttggccaatttgctttggaaaaggtgtggac-atgctttcctagctatgaatttttttagagaggag |
2401147 |
T |
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| Q |
297 |
aaattattaaccaaactctcaaatcaatt |
325 |
Q |
| |
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||||||||||||||||||||||||||||| |
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| T |
2401148 |
aaattattaaccaaactctcaaatcaatt |
2401176 |
T |
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