View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19409_high_17 (Length: 395)
Name: NF19409_high_17
Description: NF19409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19409_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 8 - 380
Target Start/End: Original strand, 43455754 - 43456126
Alignment:
| Q |
8 |
agattatactgtggatgccacgacagtagtgttcaggtatcaagttttaagaagtacgacatagcctaaatccaatgtgatgctatctcaacttgagtat |
107 |
Q |
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| T |
43455754 |
agattatactgtggatgccacgacagtagtgttcaggtatcaagttttaagaagtacgacatagcctaaatccaatgtgatgctatctcaacttgagtat |
43455853 |
T |
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| Q |
108 |
gtgatgttatctcgacatatttgtgataataatattgtcatatttcaggagatacatttggccactggaactatcagtaatattcaaagtggttctaaaa |
207 |
Q |
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| T |
43455854 |
gtgatgttatctcgacatatttgtgataatattattgtcatatttcaggagatacatttggccactggaactatcagtaatattcaaagtggttctaaaa |
43455953 |
T |
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| Q |
208 |
gattacttgggaaagcatatcctattcatgcactgcaagttcatggtgaacttatatatgcagctggctcttccttggatggaactgctataaaggtatc |
307 |
Q |
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| T |
43455954 |
gattacttgggaaagcatatcctattcatgcactgcaagttcatggtgaacttatatatgcagctggctcttccttggatggaactgctataaaggtatc |
43456053 |
T |
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| Q |
308 |
tcacacatatatggtttgtgtgtatatataaatacttaattcttgctagaaacatcaggtttcatgatatatt |
380 |
Q |
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| T |
43456054 |
tcacacatatatggtttgtgtgtatatataaatacttaattcttgctagaaacatcaggtttcatgatatatt |
43456126 |
T |
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