View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19409_low_16 (Length: 415)

Name: NF19409_low_16
Description: NF19409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19409_low_16
NF19409_low_16
[»] chr4 (40 HSPs)
chr4 (20-405)||(4343175-4343559)
chr4 (30-405)||(4358643-4359018)
chr4 (26-394)||(4333796-4334164)
chr4 (26-405)||(4322492-4322871)
chr4 (26-405)||(4125830-4126206)
chr4 (26-394)||(4351473-4351841)
chr4 (23-401)||(4135169-4135546)
chr4 (65-404)||(25568226-25568567)
chr4 (66-179)||(6674442-6674555)
chr4 (39-389)||(6814001-6814351)
chr4 (35-165)||(6499733-6499863)
chr4 (35-185)||(6751278-6751428)
chr4 (35-179)||(6756902-6757046)
chr4 (66-185)||(6547320-6547439)
chr4 (35-185)||(6834599-6834749)
chr4 (35-179)||(6589423-6589567)
chr4 (334-390)||(6834394-6834450)
chr4 (66-185)||(6649486-6649605)
chr4 (336-390)||(6756691-6756745)
chr4 (336-389)||(6624116-6624169)
chr4 (336-389)||(6794671-6794724)
chr4 (336-401)||(7888446-7888511)
chr4 (67-179)||(6714248-6714360)
chr4 (237-389)||(6726157-6726309)
chr4 (35-179)||(6794881-6795025)
chr4 (334-389)||(6672883-6672938)
chr4 (336-390)||(6547590-6547644)
chr4 (336-390)||(6751073-6751127)
chr4 (77-185)||(6623857-6623965)
chr4 (336-388)||(6714039-6714091)
chr4 (76-127)||(6726422-6726473)
chr4 (35-122)||(6771700-6771787)
chr4 (77-179)||(6535080-6535182)
chr4 (341-375)||(6649296-6649330)
chr4 (336-390)||(8413046-8413100)
chr4 (233-389)||(6499931-6500088)
chr4 (239-275)||(6535242-6535278)
chr4 (341-389)||(6535344-6535392)
chr4 (341-373)||(7875774-7875806)
chr4 (341-373)||(7890543-7890575)
[»] chr7 (7 HSPs)
chr7 (26-394)||(36215282-36215650)
chr7 (336-394)||(34727437-34727495)
chr7 (336-394)||(18929231-18929289)
chr7 (236-394)||(34730495-34730653)
chr7 (236-394)||(34735094-34735252)
chr7 (75-121)||(34727173-34727219)
chr7 (336-385)||(34721120-34721169)
[»] chr6 (23 HSPs)
chr6 (42-394)||(5075137-5075489)
chr6 (47-404)||(5395277-5395634)
chr6 (42-401)||(5148365-5148724)
chr6 (28-390)||(5175114-5175476)
chr6 (28-390)||(5276941-5277303)
chr6 (26-399)||(5183342-5183715)
chr6 (26-394)||(5068464-5068832)
chr6 (26-393)||(5341939-5342306)
chr6 (26-394)||(5423997-5424365)
chr6 (38-386)||(5431659-5432007)
chr6 (63-374)||(5381913-5382223)
chr6 (42-307)||(5348706-5348971)
chr6 (26-394)||(5094285-5094653)
chr6 (26-394)||(5104262-5104630)
chr6 (26-394)||(5368704-5369072)
chr6 (26-357)||(5133295-5133626)
chr6 (66-384)||(5356046-5356364)
chr6 (62-405)||(5261572-5261915)
chr6 (42-394)||(5158907-5159259)
chr6 (62-363)||(5445355-5445653)
chr6 (64-394)||(5691539-5691869)
chr6 (233-299)||(5285740-5285806)
chr6 (62-176)||(5285571-5285683)
[»] chr5 (1 HSPs)
chr5 (62-360)||(8876079-8876377)
[»] chr2 (1 HSPs)
chr2 (40-403)||(22585725-22586088)
[»] scaffold0294 (1 HSPs)
scaffold0294 (63-384)||(10095-10416)
[»] scaffold0373 (2 HSPs)
scaffold0373 (336-389)||(11579-11632)
scaffold0373 (35-122)||(11276-11363)
[»] chr8 (2 HSPs)
chr8 (83-179)||(3268565-3268661)
chr8 (86-185)||(3326325-3326424)
[»] chr3 (1 HSPs)
chr3 (339-391)||(6907445-6907497)


Alignment Details
Target: chr4 (Bit Score: 333; Significance: 0; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 20 - 405
Target Start/End: Complemental strand, 4343559 - 4343175
Alignment:
Q  20 atgccgatttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  4343559 atgccgatttctgcgaaaaatccacagccatttagtatacgaataacatcatttcgatccatcccaataaagaaacaagatatgtcgaggaatatttctt 4343460  T
Q  120 tctgtgtatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactc 219  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||    
T  4343459 tctgtgtatcatcatttaaaccatcgtagcttatttttaacttcttatgcacttcatcattgggaatttttttgagtttctccaatacagaaatccactc 4343360  T
Q  220 taatagctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatct 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4343359 taatagctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaact-catttttggaaatttcagaaaaatct 4343261  T
Q  320 tctctggggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtatatttt 405  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4343260 tctctagggctcgttagcttgaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtatatttt 4343175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 30 - 405
Target Start/End: Complemental strand, 4359018 - 4358643
Alignment:
Q  30 ctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatc 129  Q
    |||| |||||||||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4359018 ctgcaaaaaatccacagccatctaatatacgaataacatcattccggtccattccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatc 4358919  T
Q  130 gtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctcc 229  Q
     |||||||||||||| || |||||||||||||||||||||||||||||||||||||        ||||| |||||||||||  |||||||||| | ||||    
T  4358918 atcatttaaaccatcataacttatttttaacttcttatgcacttgatcattgggaattctttttagtttatccaatacagatctccactctaaaatctcc 4358819  T
Q  230 ctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggc 329  Q
    || ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |    
T  4358818 ctatcaaacaaataagacccaaggacttcaagagctagtggcaatcccgcagaatacttaactacatttttggaaatttcagaaaaatcttctctaggcc 4358719  T
Q  330 tcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtatatttt 405  Q
    | ||| |||| || || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4358718 ttgtttgcttgaacgcgtgccaactaaaaagctcaagagattcactttcatccatttctttcattatgtatatttt 4358643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 26 - 394
Target Start/End: Complemental strand, 4334164 - 4333796
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||| ||||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||  |    
T  4334164 atttcagcgaaaagtccacagccatttaatatttgaataacatcatttcggtccatcccaataaagaaacaagctatgtcaaggaatattgatttctcag 4334065  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||       |||||||||||||||| |||||||||||||||     
T  4334064 tatcatcatttaaaccatcatagcttatttttaacttcttatgtacttgatcattgggaattattttgagtttctccaatacacaaatccactctaatat 4333965  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    |||||| ||||||||||||||||| ||||||||||||||||| || |||||| || |||||||||| |||||| ||||||||||||||||||||||| ||    
T  4333964 ctccctatcaaacaaataggacccgaggacttcaagagctagcggtaatcccccagaatacttaacaacatttctggaaatttcagaaaaatcttctgtg 4333865  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || |||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  4333864 ggactcgtttgcttgaatgcatgcaaactaaaaagctcaagagattcactttcatccatttctttcatt 4333796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 26 - 405
Target Start/End: Original strand, 4322492 - 4322871
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    |||||||||||||||||| | ||||||| |||| |||| ||||||||||| ||||||||||||||||||||||  |||||||||||||||  ||||| ||    
T  4322492 atttctgcgaaaaatccagaaccatttaatatatgaatgacatcatttcgatccatcccaataaagaaacaagcaatgtcaaggaatattgatttctctg 4322591  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    |||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||       |||||||||||||||| |||||||||||  ||     
T  4322592 tatcatcatttaagccatcgtagcttatttttaacttctgatgtacttgatcattgggaattcttttgagtttctccaatacacaaatccactctgttac 4322691  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||| | || |||||| |||||||||| |||||||||| ||||||||||  ||     
T  4322692 ctccctatcaaacaaataggacccaaggacttcaagagctagcggcaatctcccagaatactgaactacatttgtggaaatttctgaaaaatctttgcta 4322791  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtatatttt 405  Q
    || |||| | |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4322792 ggcctcgcttgcttgaatgcatgccaactaaaaagctcaagagattcactttcatccatttctttcattatgtatatttt 4322871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 26 - 405
Target Start/End: Original strand, 4125830 - 4126206
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||| ||||||| ||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||  ||| | ||    
T  4125830 atttcagcgaaaagtccacagccatttaaaataagaataacatcatttcggtccatcccaattaagaaacaagctatgtcaaggaatattgatttttctg 4125929  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    ||||   |||||||||||| ||||||||||||||||||||||| ||||||||||||||||       |||||||||||||||| ||||||||||| |||     
T  4125930 tatc---atttaaaccatcatagcttatttttaacttcttatgtacttgatcattgggaattcttttgagtttctccaatacacaaatccactctgatac 4126026  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||||||| || |||| |||||||||||| | |||||||||||| |||| |||||     
T  4126027 ctccctatcaaacaaataggatccaaggacttcaagagctagtggcaatcccccagaatatttaactacatttctagaaatttcagaataatcatctcta 4126126  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtatatttt 405  Q
    || |||||| |||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  4126127 ggactcgtttgcttgaaagcatgccaactaaaaagttcaagagattcactttcatccatttctttcattatgtatatttt 4126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 26 - 394
Target Start/End: Complemental strand, 4351841 - 4351473
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||||| ||||| ||  |||| ||||| ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||  |||||  |    
T  4351841 atttctgtgaaaagtctgcagctatttaatatacaaataacatcatttctgtctatcccaataaagaaacaagctatgtcaaggaatattgatttctccg 4351742  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    | || ||||||||||||| |||||||||||||| | ||||||  ||||| ||||||||||       |||||||||||||||| ||||||| |||||||     
T  4351741 tgtcatcatttaaaccatggtagcttatttttagcctcttatatacttgctcattgggaatactttggagtttctccaatacacaaatccagtctaatac 4351642  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
     ||||| |||||||| |||||||||||||||||||||||||| ||||| ||  || | ||||||||||||||| |||||||||| |||||||||||| ||    
T  4351641 ttccctatcaaacaagtaggacccaaggacttcaagagctagcggcaaccctccagagtacttaactacatttatggaaatttcggaaaaatcttctttg 4351542  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || ||| || |||| |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  4351541 ggactcttttgcttgaatgcatgccaactaaaacgctcaagagattcactttcattcatttctttcatt 4351473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 401
Target Start/End: Original strand, 4135169 - 4135546
Alignment:
Q  23 ccgatttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttct 122  Q
    |||||||| || ||||  ||||| ||||||| ||||   |||||||| |||||||||||||||||||||||| |||  |||||||||||||| ||| |||    
T  4135169 ccgatttcagcaaaaagaccacaaccatttaatatatccataacatcgtttcggtccatcccaataaagaaaaaagcaatgtcaaggaatatatctctct 4135268  T
Q  123 gtgtatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcatt-gggaannnnnnngagtttctccaatacagaaatccactcta 221  Q
      || || |||||||||||||| ||||||||||| |||||||| |||||||||||||| |||||       ||| |||||||||| | |   ||| | |     
T  4135269 cggtgtcatcatttaaaccatcatagcttattttcaacttcttttgcacttgatcattggggaattctcttgag-ttctccaatagacactcccattttg 4135367  T
Q  222 atagctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttc 321  Q
     || ||  || |||||||| ||||||||||||||||| ||||| || || | |||| |||||||||  || |||||| ||||||||| ||  |||| |||    
T  4135368 ttacctgtctatcaaacaagtaggacccaaggacttccagagccagcgggagtcccccacaatactagacaacatttatggaaatttgag-caaattttc 4135466  T
Q  322 tctggggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtata 401  Q
    ||| || |||  |  ||| |||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||||||    
T  4135467 tcttggactcactttcttgaatgcatgccaactaaaaagctcaagagattcactttcatctatttcctccattatgtata 4135546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 65 - 404
Target Start/End: Complemental strand, 25568567 - 25568226
Alignment:
Q  65 acatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttct 164  Q
    |||| ||||||| ||| ||||||||||||||||| |||||  |||||||| |||| ||| ||||| ||||||| | |||| ||||||||||| |||||||    
T  25568567 acattatttcggaccaacccaataaagaaacaagctatgttgaggaatatatcttcctgagtatcatcatttagagcatcatagcttattttcaacttct 25568468  T
Q  165 tatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctct--caaacaaataggacccaaggacttcaaga 262  Q
    | || |||||| | || ||||       |||||| |||||||||     ||| |||  || | ||| ||  |||||||||| |||||||| ||||| |||    
T  25568467 tttgtacttgaccgttaggaattcttttgagtttttccaatacattctcccattctgttacccccccctatcaaacaaatatgacccaagcacttctaga 25568368  T
Q  263 gctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaagct 362  Q
    ||||| ||||||||  || |||||| || ||||||| |||||||||||| |||||| ||| | ||||| | | |||| ||||||||||| ||||||||||    
T  25568367 gctagcggcaatcctccagaatactcaattacatttctggaaatttcagcaaaatcatctttagggcttgcttgcttgaatgcatgccagctaaaaagct 25568268  T
Q  363 caagagattcacttccatccatttctttcattatgtatattt 404  Q
    |||  ||||||||| ||  ||||||||||||| |||||||||    
T  25568267 caattgattcactttcacacatttctttcattgtgtatattt 25568226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 6674555 - 6674442
Alignment:
Q  66 catcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttctt 165  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||| |||| | || |||||||||||| |||||| ||| | ||||||    
T  6674555 catcatttcggtccatcccaataaagaagcaagctatatcaaggaatatttgtttctctgtaacatcttttaaaccatcgaagcttactttcagcttctt 6674456  T
Q  166 atgcacttgatcat 179  Q
     || ||||||||||    
T  6674455 ttgtacttgatcat 6674442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 389
Target Start/End: Complemental strand, 6814351 - 6814001
Alignment:
Q  39 atccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaa 138  Q
    ||||||| ||||||| ||| || || ||||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||| ||||   || |||||    
T  6814351 atccacacccatttaatattcgtattacatcatttcggtccctcccaataaagaaacaagctatatcaaggaatatttgtttctctgtaaaatcttttaa 6814252  T
Q  139 accatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaac 238  Q
    ||||||| |||||| |||||  || |  || ||||||||||  ||||       |||||||||||| ||   |  ||| |||  |   || |  ||| ||    
T  6814251 accatcgaagcttacttttagtttttcctgtacttgatcatgaggaatacatttgagtttctccaaaactttatgccagtctgttgtttcacagtcagac 6814152  T
Q  239 aaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagct 338  Q
    ||||||||||| ||||||||||| ||||| ||||||||| || ||||   ||  |||| | |  ||  || || |||||||||| | || || | | |||    
T  6814151 aaataggacccgaggacttcaagtgctagtggcaatcccccagaataagaaatcacatctgttaaatgtttagcaaaatcttctatcggacttggttgct 6814052  T
Q  339 taaatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    | |||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  6814051 tgaatgcatgccaactgaaaagcttaagagattcactttcatccatttctt 6814001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 6499733 - 6499863
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcat 134  Q
    ||||||||||| ||||||| |||  | || ||||||||||||||||||||||||||||| |||| ||| ||||||||||| | ||||| |||| | || |    
T  6499733 aaaaatccacacccatttaatatttgtattacatcatttcggtccatcccaataaagaagcaagctatatcaaggaatatgtgtttctctgtaacatctt 6499832  T
Q  135 ttaaaccatcgtagcttatttttaacttctt 165  Q
    |||| |||||  |||||| ||||||||||||    
T  6499833 ttaagccatcaaagcttacttttaacttctt 6499863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 6751428 - 6751278
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcat 134  Q
    ||||| ||||| ||||||| |||  |||| ||||||||||||||||| |||||||||||||| | ||| ||||||||||||| |||||  ||| | |  |    
T  6751428 aaaaacccacacccatttaatatttgaattacatcatttcggtccattccaataaagaaacaggctatatcaaggaatatttgtttctccgtaacatact 6751329  T
Q  135 ttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaa 185  Q
    ||||||||||| |||||| ||||| ||| ||||  |||||||||| |||||    
T  6751328 ttaaaccatcgaagcttacttttagctttttatatacttgatcatggggaa 6751278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 6757046 - 6756902
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcat 134  Q
    ||||||||||| ||||||| |||  | || |||||||||| |||| |||||||||||||||||| ||| ||||||||||||| ||||| |||  | || |    
T  6757046 aaaaatccacacccatttaatatttgtattacatcatttctgtccttcccaataaagaaacaagctatatcaaggaatatttgtttctctgttacatctt 6756947  T
Q  135 ttaaaccatcgtagcttatttttaacttcttatgcacttgatcat 179  Q
    | ||||||| | |||||| ||||| ||| || |||||||||||||    
T  6756946 tcaaaccattgaagcttacttttagcttattctgcacttgatcat 6756902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 6547320 - 6547439
Alignment:
Q  66 catcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttctt 165  Q
    ||||||||  ||||||||||||||||||||||| ||| ||||||||||||| ||| | |||| | || |||||||||||| |||||| ||| | ||||||    
T  6547320 catcatttttgtccatcccaataaagaaacaagctatatcaaggaatatttgtttgtctgtaacatcttttaaaccatcgaagcttactttcagcttctt 6547419  T
Q  166 atgcacttgatcattgggaa 185  Q
     || |||| ||||| |||||    
T  6547420 ttgtacttcatcatggggaa 6547439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 6834749 - 6834599
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcat 134  Q
    ||||| ||||| ||||||| |||  |||| ||||||||| |||||||||||||||||||||| | ||| || || ||||||| || || |||| | || |    
T  6834749 aaaaacccacacccatttaatatttgaattacatcattttggtccatcccaataaagaaacaggctatatcgagaaatatttgttgctctgtaacatctt 6834650  T
Q  135 ttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaa 185  Q
    ||||||||||  |||||| | ||| |||||| || |||||||||| |||||    
T  6834649 ttaaaccatcaaagcttactcttagcttcttctgtacttgatcatggggaa 6834599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 6589423 - 6589567
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcat 134  Q
    ||||| ||||| ||||||| |||  | || ||||| |||  |||||||||||||||||||||||  || ||||||||||||| ||||| ||||   || |    
T  6589423 aaaaacccacaaccatttaatatctgtattacatcctttttgtccatcccaataaagaaacaagcaatatcaaggaatatttgtttctctgtaaaatctt 6589522  T
Q  135 ttaaaccatcgtagcttatttttaacttcttatgcacttgatcat 179  Q
    ||||||||| | |||||| ||||| |||||  || ||||||||||    
T  6589523 ttaaaccatggaagcttacttttagcttctcctgtacttgatcat 6589567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 6834450 - 6834394
Alignment:
Q  334 tagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttcttt 390  Q
    |||||| |||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  6834450 tagcttgaatgcatgccaactgaaaagctcaagagattcactttcgtccatttcttt 6834394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 6649605 - 6649486
Alignment:
Q  66 catcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttctt 165  Q
    |||||||||||||||| ||||||||||||||||  || ||||||||||||| ||||| |||  | || |||||||||||  |||| | ||| |  |||||    
T  6649605 catcatttcggtccattccaataaagaaacaagcaatatcaaggaatatttgtttctctgttacatcttttaaaccatcaaagctgactttcagtttctt 6649506  T
Q  166 atgcacttgatcattgggaa 185  Q
     || |||||||||| |||||    
T  6649505 ctgtacttgatcatggggaa 6649486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 6756745 - 6756691
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttcttt 390  Q
    |||| |||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  6756745 gcttgaatgcatgccaactgaaaagctcaagagattcgctttcatccatttcttt 6756691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 6624116 - 6624169
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  6624116 gcttgaatgcatgccaactgaaaagctcaagagattcactctcatccatttctt 6624169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 6794724 - 6794671
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    |||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  6794724 gcttgaatgcatgccaactgaaaagcttaagagattcactttcatccatttctt 6794671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 7888446 - 7888511
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtata 401  Q
    |||| |||||||||||| |||||||||| ||||||||||| | ||||||||| |||||| ||||||    
T  7888446 gcttgaatgcatgccaattaaaaagctctagagattcactgctatccatttccttcattctgtata 7888511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 6714360 - 6714248
Alignment:
Q  67 atcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttctta 166  Q
    |||||||  ||||||||| |||||||||||||  || |||| |||||||| ||||| |||| | || |||||||||||  |||||| ||| | ||||||     
T  6714360 atcatttttgtccatcccgataaagaaacaagcaatatcaaagaatatttgtttctctgtaacatcttttaaaccatcaaagcttactttcagcttcttc 6714261  T
Q  167 tgcacttgatcat 179  Q
    || ||||||||||    
T  6714260 tgtacttgatcat 6714248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 389
Target Start/End: Complemental strand, 6726309 - 6726157
Alignment:
Q  237 acaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttag 336  Q
    ||||||| ||||||| ||||||||| ||||| ||||||||| || ||||   ||  |||| | | |||  || || |||||||||| | || || | | |    
T  6726309 acaaatatgacccaatgacttcaagtgctagtggcaatcccccagaatatgcaatcacatctgttgaatgtttagcaaaatcttcttttggacttgattg 6726210  T
Q  337 cttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    ||| |||||||||||||| |||||||  |||||||||||| ||||||||||||    
T  6726209 cttgaatgcatgccaactgaaaagcttgagagattcactttcatccatttctt 6726157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 6795025 - 6794881
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcat 134  Q
    ||||||||||| ||||||| |||  ||||  |||||||| | ||||||||||||||||| |||| ||| ||||| ||||||| |||||  |||   || |    
T  6795025 aaaaatccacacccatttaatatttgaattgcatcattttgatccatcccaataaagaagcaagctatatcaagaaatatttgtttctcagtaaaatctt 6794926  T
Q  135 ttaaaccatcgtagcttatttttaacttcttatgcacttgatcat 179  Q
    ||||||||||| | |||| |||||  ||||  || ||||||||||    
T  6794925 ttaaaccatcgaaacttacttttagtttctcttgtacttgatcat 6794881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 6672938 - 6672883
Alignment:
Q  334 tagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    |||||| || ||||||||||| |||||||| |||||||||||| ||||||||||||    
T  6672938 tagcttgaacgcatgccaactgaaaagctctagagattcactttcatccatttctt 6672883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 390
Target Start/End: Original strand, 6547590 - 6547644
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttcttt 390  Q
    |||| |||||||||||||| || ||||||||||||||| || |||||||||||||    
T  6547590 gcttgaatgcatgccaactgaatagctcaagagattcaatttcatccatttcttt 6547644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 6751127 - 6751073
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttcttt 390  Q
    |||| |||||||||||||| ||||||||||||||||||||| | | |||||||||    
T  6751127 gcttgaatgcatgccaactgaaaagctcaagagattcactttcgttcatttcttt 6751073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 6623857 - 6623965
Alignment:
Q  77 tccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgat 176  Q
    ||||| ||||| |||||||| | ||| ||||||||||||| || || |||| | || |||||||||||  |||||| ||||| |||||| || |||| ||    
T  6623857 tccattccaatcaagaaacaggctatatcaaggaatatttgttgctctgtaacatcttttaaaccatcaaagcttacttttagcttcttctgtacttcat 6623956  T
Q  177 cattgggaa 185  Q
    ||| |||||    
T  6623957 catggggaa 6623965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 6714091 - 6714039
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttct 388  Q
    |||||||||||||||| | |||||||||||||||||| ||  |||||||||||    
T  6714091 gcttaaatgcatgccagcaaaaaagctcaagagattccctctcatccatttct 6714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 6726473 - 6726422
Alignment:
Q  76 gtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgta 127  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| ||||| ||||    
T  6726473 gtccatcccaataaagaaacaagctatatcaagaaatatttgtttctctgta 6726422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 6771787 - 6771700
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttct 122  Q
    ||||||||||| ||||||| |||  | || ||||| |||  ||| | ||||||||||||||||| ||| ||||||||||||| |||||    
T  6771787 aaaaatccacacccatttaatatttgtattacatcctttttgtctaccccaataaagaaacaagctatatcaaggaatatttgtttct 6771700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 6535080 - 6535182
Alignment:
Q  77 tccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgat 176  Q
    ||||| ||||| |||||||| | ||| ||||||||||||| || || |||| | || |||||||||||  | |||||| ||| |||||| || |||||||    
T  6535080 tccattccaatcaagaaacaggctatatcaaggaatatttgttgctctgtaacatcttttaaaccatcaaaacttattcttagcttcttttgtacttgat 6535179  T
Q  177 cat 179  Q
    |||    
T  6535180 cat 6535182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 6649330 - 6649296
Alignment:
Q  341 aatgcatgccaactaaaaagctcaagagattcact 375  Q
    |||||||||||||| ||||||||||||||||||||    
T  6649330 aatgcatgccaactgaaaagctcaagagattcact 6649296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 8413100 - 8413046
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttcttt 390  Q
    |||| |||||||||||||| |||||||  |||||||||||| | |||||||||||    
T  8413100 gcttgaatgcatgccaactgaaaagcttgagagattcactttcgtccatttcttt 8413046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 389
Target Start/End: Original strand, 6499931 - 6500088
Alignment:
Q  233 tcaaacaaataggacccaaggacttcaagagctagaggcaa-tcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctc 331  Q
    ||| |||||||||||||||| |||||||| ||||| ||||| |||| || ||||   ||| |||| ||| |||  |  || |||||||||| | ||  |     
T  6499931 tcagacaaataggacccaagaacttcaagtgctagtggcaaatcccccagaataagaaaccacatcttttgaatgtgtagcaaaatcttctgttggagtt 6500030  T
Q  332 gttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    | | |||| ||||||||||| || ||||||||||||||||||||| | ||||| ||||    
T  6500031 ggttgcttgaatgcatgccagctgaaaagctcaagagattcactttcgtccatatctt 6500088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 6535242 - 6535278
Alignment:
Q  239 aaataggacccaaggacttcaagagctagaggcaatc 275  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  6535242 aaataggacccaaggacttcaagtgctaggggcaatc 6535278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 6535344 - 6535392
Alignment:
Q  341 aatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    |||||||||||||| |||||  |||||| ||||||| ||||||||||||    
T  6535344 aatgcatgccaactgaaaagagcaagagcttcactttcatccatttctt 6535392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 7875774 - 7875806
Alignment:
Q  341 aatgcatgccaactaaaaagctcaagagattca 373  Q
    |||||||||||||||| ||||||||||||||||    
T  7875774 aatgcatgccaactaagaagctcaagagattca 7875806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 7890543 - 7890575
Alignment:
Q  341 aatgcatgccaactaaaaagctcaagagattca 373  Q
    |||||||||||||||||||||| ||||||||||    
T  7890543 aatgcatgccaactaaaaagcttaagagattca 7890575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 8e-71; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 26 - 394
Target Start/End: Original strand, 36215282 - 36215650
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    |||||||| |||| | |||  ||||||| |||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |    
T  36215282 atttctgcaaaaagttcacttccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctatgtcaaggaatatttctttctccg 36215381  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    | || ||||||| ||| || ||||| |||||||||||||| || ||||| ||||||||||       |||||| ||||||||| |  ||||||||| ||     
T  36215382 tgtcatcatttagaccttcatagctcatttttaacttcttttgtacttggtcattgggaattcttttgagtttgtccaatacacacttccactctattat 36215481  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    | |||| ||||||||||| |||||||||||||| |||||||  || | |  | || |||||| |||||||||  |||||||| ||| |||||||||| ||    
T  36215482 ccccctatcaaacaaatatgacccaaggacttccagagctaacggtagttgcccagaatactcaactacattgctggaaattccagcaaaatcttctttg 36215581  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || |||  | |||| |||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  36215582 ggcctcacttgcttgaatgcatgccaactaaaaagctcaattgattcactttcatccatttctttcatt 36215650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 394
Target Start/End: Original strand, 34727437 - 34727495
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    |||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34727437 gcttgaatgcatgccaactaaaaagctcaagagattcattgccatccatttctttcatt 34727495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 18929289 - 18929231
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    |||| ||||||||||||||||||||||||||||||||| |  | |||||||||||||||    
T  18929289 gcttgaatgcatgccaactaaaaagctcaagagattcattgtcgtccatttctttcatt 18929231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 394
Target Start/End: Original strand, 34730495 - 34730653
Alignment:
Q  236 aacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgtta 335  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| || | |||||||| ||||   | ||||  |||  |||| ||||| | ||  | | |     
T  34730495 aacaaaaaggacccaatgacttcaagagctagaggcgatcccccagagtacttaacaacatcagtagaaaggtcaccaaaaccttctataggaattggtt 34730594  T
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    |||| ||| |||||||||| |||||||||||||||||| | |  |||||||||||||||    
T  34730595 gcttgaatacatgccaactgaaaagctcaagagattcattgctgtccatttctttcatt 34730653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 394
Target Start/End: Original strand, 34735094 - 34735252
Alignment:
Q  236 aacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgtta 335  Q
    |||||| ||||||||| ||||| |||||||||||||||||||  | | |||||||| ||||   | ||||  |||  |||| ||||| | ||  | | |     
T  34735094 aacaaaaaggacccaatgacttgaagagctagaggcaatcccctagagtacttaacaacatcagtagaaagctcaccaaaaccttctataggaattggtt 34735193  T
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    | || ||||||||||||||||||||||||||||||||| | |  |||||||||||||||    
T  34735194 gtttgaatgcatgccaactaaaaagctcaagagattcattgctgtccatttctttcatt 34735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 34727173 - 34727219
Alignment:
Q  75 ggtccatcccaataaagaaacaagatatgtcaaggaatatttctttc 121  Q
    |||||||||||||||||||| |||  || ||||||||||||||||||    
T  34727173 ggtccatcccaataaagaaaaaagcaatatcaaggaatatttctttc 34727219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 34721120 - 34721169
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatt 385  Q
    |||| ||||||| |||||||||||| ||||||||||||||  ||||||||    
T  34721120 gcttgaatgcataccaactaaaaagttcaagagattcactctcatccatt 34721169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 42 - 394
Target Start/End: Original strand, 5075137 - 5075489
Alignment:
Q  42 cacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaacc 141  Q
    |||| ||||||| |||| |  ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||  ||||  || || || ||||||||    
T  5075137 cacatccatttaatataagtgtaacatcatttcgatccatcccaataaagaaacaagctatgtcgaggaatattttcttctcagtgtcatcgtttaaacc 5075236  T
Q  142 atcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaa 241  Q
    ||| |||||||||||||||||||| |||||||||||||| ||||       |||||||||||||||| |  ||||||||  || | |||| |||||||||    
T  5075237 atcatagcttatttttaacttcttctgcacttgatcattaggaattcttatgagtttctccaatacacacttccactctgctatccccctatcaaacaaa 5075336  T
Q  242 taggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaa 341  Q
    || ||||||| |||||  |||||||| ||||||||| || ||||||  ||||||||| | |||||| ||| |||||||||| | || || | | | || |    
T  5075337 tatgacccaatgacttgtagagctagcggcaatcccccagaatactccactacatttcttgaaattccagcaaaatcttctataggacttgcttgtttga 5075436  T
Q  342 atgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  5075437 atgcatgccaactaaaaagctcaattgattcactttcatccatttctttcatt 5075489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 47 - 404
Target Start/End: Complemental strand, 5395634 - 5395277
Alignment:
Q  47 ccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgt 146  Q
    ||||||| |||| | ||||||||||| | ||||||||||||||| ||||||| |||||||||||||||||||||||  || || ||||||||| |||| |    
T  5395634 ccatttaatatatgtataacatcattcctgtccatcccaataaaaaaacaagctatgtcaaggaatatttctttctcagtgtcatcatttaaagcatcat 5395535  T
Q  147 agcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaatagga 246  Q
    ||||||||||||||||||| || ||||||||||| ||||       || ||| || |||||| |  ||||||||  ||   ||   ||||||||||  ||    
T  5395534 agcttatttttaacttcttttgaacttgatcattaggaattcttttgattttttctaatacacacttccactctgctaatcccaattcaaacaaatgtga 5395435  T
Q  247 cccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgca 346  Q
     ||||||||||| |||||||| ||||||||| || |||||| |||||||||| | |||||||| | |||||||||||| || |||| | |||| ||||||    
T  5395434 tccaaggacttccagagctagtggcaatcccccagaatactcaactacatttcttgaaatttctgcaaaatcttctcttggactcgcttgcttgaatgca 5395335  T
Q  347 tgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtatattt 404  Q
    ||||||||||| |||||||  ||||| ||||| ||||||||||||||| |||| ||||    
T  5395334 tgccaactaaagagctcaattgattcgcttccgtccatttctttcattttgtaaattt 5395277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 42 - 401
Target Start/End: Original strand, 5148365 - 5148724
Alignment:
Q  42 cacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaacc 141  Q
    |||||||||||| |||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     | | ||||||||| |    
T  5148365 cacagccatttaatatatgtatgacatcatttcggtccatcccaataaagaaacaagctatgtcaaggaatatttctttcacaagaacatcatttaaatc 5148464  T
Q  142 atcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaa 241  Q
     || |||||||||||||||||||| |||||||||||||||||||       |||||| ||||||||| |  ||||||||| || | |||| ||||| |||    
T  5148465 gtcatagcttatttttaacttcttctgcacttgatcattgggaattcttttgagtttgtccaatacacacttccactctattatccccctatcaaataaa 5148564  T
Q  242 taggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaa 341  Q
    || |||||||  ||||| |||||||| |||| || | |  |||||| |||||   || |||| ||| ||| |||||||||||| || |||| | |||| |    
T  5148565 tacgacccaataacttccagagctagcggcagtcgccccaaatactcaactatccttctggatattccagcaaaatcttctctaggactcgcttgcttga 5148664  T
Q  342 atgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtata 401  Q
    ||||||||||||||||||||  ||  ||||||| | ||||||||||||||||| ||||||    
T  5148665 atgcatgccaactaaaaagcataattgattcaccttcatccatttctttcattttgtata 5148724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 390
Target Start/End: Complemental strand, 5175476 - 5175114
Alignment:
Q  28 ttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgta 127  Q
    |||||| ||||||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||  ||||||   |    
T  5175476 ttctgcaaaaaatccacagccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctacgtcgaggaatattgatttctggtaa 5175377  T
Q  128 tcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagct 227  Q
    || || | ||||||||| |||||||||||||||||||| || ||||  ||||| ||||        ||||||| ||||||| || |||| |||  || ||    
T  5175376 tcatcgtctaaaccatcatagcttatttttaacttcttttgtactttgtcattaggaattctttctagtttcttcaatacacaattccattctgttacct 5175277  T
Q  228 ccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggg 327  Q
     | ||||||||||||||  |||||| ||||| |||||||  ||||||||| || |||||||||| ||||||||||||||||||  ||| |||||| ||||    
T  5175276 tcttctcaaacaaatagcgcccaagaacttctagagctaacggcaatcccccagaatacttaacaacatttttggaaatttcaacaaattcttctatggg 5175177  T
Q  328 gctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttcttt 390  Q
     |||  | | || |||||||||||| |||| |||||||  ||||||||| |||||||||||||    
T  5175176 actcacttgtttgaatgcatgccaattaaagagctcaattgattcactttcatccatttcttt 5175114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 28 - 390
Target Start/End: Complemental strand, 5277303 - 5276941
Alignment:
Q  28 ttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgta 127  Q
    |||||| ||||||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||  ||||||   |    
T  5277303 ttctgcaaaaaatccacagccatttaatatatgtataacatcatttctgtccatcccaataaagaaacaagctacgtcgaggaatattgatttctggtaa 5277204  T
Q  128 tcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagct 227  Q
    || || | ||||||||| |||||||||||||||||||| || ||||  ||||| ||||        ||||||| ||||||| || |||| |||  || ||    
T  5277203 tcatcgtctaaaccatcatagcttatttttaacttcttttgtactttgtcattaggaattctttctagtttcttcaatacacaattccattctgttacct 5277104  T
Q  228 ccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggg 327  Q
     | ||||||||||||||  |||||| ||||| |||||||  ||||||||| || ||||| |||| ||||||||||||||||||  ||| |||||| ||||    
T  5277103 tcttctcaaacaaatagcgcccaagaacttctagagctaacggcaatcccccagaatacataacaacatttttggaaatttcaacaaattcttctatggg 5277004  T
Q  328 gctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttcttt 390  Q
     |||  | | || |||||||||||| |||| |||||||  |||||| || |||||||||||||    
T  5277003 actcacttgtttgaatgcatgccaattaaagagctcaattgattcattttcatccatttcttt 5276941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 26 - 399
Target Start/End: Original strand, 5183342 - 5183715
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    |||||||| |||||| | |  ||||||| |||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||  |    
T  5183342 atttctgcaaaaaattcgctaccatttaatatatgtataacatcattcctgtccatcccaataaagaaacaagctatgtcaaggaatatttctttctcgg 5183441  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    | || ||| ||| | ||||||||||||||||||||||||| || ||||||||||| ||||       |||||| || ||| || |  |||| |||  ||     
T  5183442 tgtcatcacttagagcatcgtagcttatttttaacttcttttgtacttgatcattaggaattcttttgagtttttctaatgcacacttccattcttctat 5183541  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    | || | ||||||||||| || ||||||||||| |||||||| ||||||||| || |||||| |||||||||| | |||||| ||| |||| |||||||     
T  5183542 ccccatatcaaacaaatatgatccaaggacttccagagctagtggcaatcccccagaatactcaactacatttcttgaaattccagcaaaaccttctcta 5183641  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgta 399  Q
    || |  | | |||| ||||||||||||||||| |||||||  ||||| ||| ||||||||  ||||||| ||||    
T  5183642 ggacctgcttgcttgaatgcatgccaactaaatagctcaattgattcgctttcatccattattttcattttgta 5183715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 26 - 394
Target Start/End: Original strand, 5068464 - 5068832
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||| || |||| ||| || ||||||| |||| |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |    
T  5068464 atttcagcaaaaagtccgcatccatttaatataagtgtaacatcatttcggtccatcccaataaagaaacaagctatgtcaaggaatatttctttctcag 5068563  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    |||| ||||||||| |||| ||||||||| |||||||||  || ||||||| ||| ||||       |||||| |||||||||    |||| |||  ||     
T  5068564 tatcatcatttaaagcatcatagcttattcttaacttctcctgtacttgattattaggaattcttttgagtttgtccaatacacttttccattctgttac 5068663  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    ||| || ||||||||||| |||||||||||||| | |||||| ||||||||| || |||||| ||| || ||| |||||||| ||| |||||||| | |     
T  5068664 ctctctatcaaacaaatatgacccaaggacttccaaagctagtggcaatcccccagaatactcaacgacctttctggaaattgcagcaaaatcttttgta 5068763  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || | || | |||| ||||| ||||||||||| |||| ||  ||||||||| ||||||| | |||||||    
T  5068764 ggacccgcttgcttgaatgcgtgccaactaaatagcttaattgattcactttcatccatgtgtttcatt 5068832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 26 - 393
Target Start/End: Complemental strand, 5342306 - 5341939
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    |||||||| |||| |||||||||||||| |||  | || |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  |    
T  5342306 atttctgcaaaaagtccacagccatttaatatttgtatgacatcatttcggtccatcccaataaagaaacaagctatgtcaagaaatatttctttctcag 5342207  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    | ||||||||||||||||| |||||||||||||||||||| || |||||||  || ||||        ||||| || ||| || |  |||| |||| |      
T  5342206 tctcgtcatttaaaccatcatagcttatttttaacttcttttgtacttgattgttaggaattcttttaagtttttctaatgcacagttccattctactgc 5342107  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    | | || ||||||||||| || || || ||||| | |||||| ||||||||  |||||||||  ||||||||||  |||||| ||  |||| | |||||     
T  5342106 ccctctatcaaacaaatatgagcctagaacttccaaagctagcggcaatccaccacaatactcgactacattttcagaaattccaacaaaaccatctctt 5342007  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcat 393  Q
    || || | | |||| || |||||||||||||| |||||||| |||||| || ||||||||||||||||    
T  5342006 ggacttgcttgcttgaacgcatgccaactaaatagctcaagtgattcatttgcatccatttctttcat 5341939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 26 - 394
Target Start/End: Complemental strand, 5424365 - 5423997
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||| || |||| |||||| ||||||| |||| |  |||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||  |    
T  5424365 atttcagcaaaaagtccacatccatttaatataagtgtaacatcatttctgtccattccaataaagaaacaagctatgtcaaggaatatttctttctcag 5424266  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    |||| ||||||||| |||| ||||||||| |||||||||  || ||||||| ||| ||||       |||||| |||||| ||    |||| |||   |     
T  5424265 tatcatcatttaaagcatcatagcttattcttaacttctcctgtacttgattattaggaattcttttgagtttttccaatgcacttttccattctgtaat 5424166  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    | | || || |||||||| |||||||||||||| | |||||| ||||||||  || |||| | |||||||||| | |||||||||| |||||||| | |     
T  5424165 ccctctgtcgaacaaatatgacccaaggacttccaaagctagtggcaatccaccagaataatcaactacatttctagaaatttcagcaaaatcttttgta 5424066  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || |||| | |||| || ||||||||||| || |||||||  ||||||||| ||||||| | |||||||    
T  5424065 ggactcgcttgcttgaaggcatgccaacttaatagctcaattgattcactttcatccatgtgtttcatt 5423997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 38 - 386
Target Start/End: Complemental strand, 5432007 - 5431659
Alignment:
Q  38 aatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcattta 137  Q
    |||| |||||||||||||||| | |||||||||||||| ||| | |||||||||||||||| |||||||||||||||| ||||||| |  |  || | ||    
T  5432007 aatcgacagccatttagtatatgtataacatcatttcgctccttaccaataaagaaacaagctatgtcaaggaatattgctttctgggatttatcgtcta 5431908  T
Q  138 aaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaa 237  Q
    ||||||| ||||||||||||||||| || || |||| || ||||||||       ||||||||||| |||| |  |||| |||  ||  ||||||||| |    
T  5431907 aaccatcatagcttatttttaacttattttgtactttattattgggaattgttttgagtttctccagtacacatttccattctgttacatccctctcata 5431808  T
Q  238 caaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagc 337  Q
    ||||||   |||||| ||||| |||||||| |||||||||||  ||||| ||||  ||||| | |||||||||  ||| ||| || |||| |||  | ||    
T  5431807 caaatatcgcccaagaacttctagagctagcggcaatcccgcggaatacataacggcatttctagaaatttcaacaaattctgctttgggactcacttgc 5431708  T
Q  338 ttaaatgcatgccaactaaaaagctcaagagattcacttccatccattt 386  Q
    || |||||||||||  ||||||||||||| ||||||||  |||||||||    
T  5431707 ttgaatgcatgccatataaaaagctcaagtgattcactgtcatccattt 5431659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 63 - 374
Target Start/End: Complemental strand, 5382223 - 5381913
Alignment:
Q  63 taacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaactt 162  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| |   ||||||||||||||||||| |||||||||||||||||    
T  5382223 taacatcgtttcggtccatcc-aataaagaaacaagctatgtcaaggaatatttctttttcgctatcgtcatttaaaccatcatagcttatttttaactt 5382125  T
Q  163 cttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaataggacccaaggacttcaaga 262  Q
    |   || |||| |||||||||||       || ||||||||||||| |  |||| |||  ||   |||| ||||||||| | || ||||||||||| |||    
T  5382124 ccgttgtacttcatcattgggaattattttgattttctccaatacacacttccaatctgctactcccctttcaaacaaaaaagaaccaaggacttctaga 5382025  T
Q  263 gctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaagct 362  Q
    ||||||||||||||| || | || | |||||  | |||  |||||| | ||||||||||| | || || | | |||| ||||||||||| ||||||||||    
T  5382024 gctagaggcaatcccccagagtagtcaactatttctttacaaattttaaaaaaatcttctgtaggccttggttgcttgaatgcatgccagctaaaaagct 5381925  T
Q  363 caagagattcac 374  Q
    |||  |||||||    
T  5381924 caattgattcac 5381913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 42 - 307
Target Start/End: Complemental strand, 5348971 - 5348706
Alignment:
Q  42 cacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaacc 141  Q
    |||| ||||||| |||| |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||| ||| |    
T  5348971 cacatccatttaatataagtgtaacatcatttcggtccatcccaataaagaaacaagctatgtcaaggaatatttctttctcagtatcatcattcaaagc 5348872  T
Q  142 atcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaa 241  Q
    ||||||||||||| ||||||| |  || ||||||| ||| ||||       |||||| |||||||||    |||| |||  || | | || ||||||||     
T  5348871 atcgtagcttattcttaacttttcctgtacttgattattaggaattcttttgagtttgtccaatacacttttccattctgttacccctctatcaaacaat 5348772  T
Q  242 taggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatt 307  Q
     | |||||||||||||| | |||||| ||||||||  || |||||| |||||||||| ||||||||    
T  5348771 aatgacccaaggacttccaaagctagtggcaatcctccagaatactcaactacatttctggaaatt 5348706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 394
Target Start/End: Complemental strand, 5094653 - 5094285
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||| || |||| |||||| ||||||| |||| |  |||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||       
T  5094653 atttcagcaaaaagtccacatccatttaatataagtgtaacgtcatttcggtccatcccaataaagaaacaagctacatcaaggaatatttctttctcaa 5094554  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    | || ||||||||| |||| ||||||||| |||||||||| || | ||||| ||| ||||       |||||| |||||| ||    |||| |||  ||     
T  5094553 tgtcatcatttaaagcatcatagcttattcttaacttcttctgtaattgattattaggaattcttttgagtttgtccaatgcacttttccattctgttac 5094454  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    |||||| || || ||||| |||||||||||||| |  ||||| ||||| ||| || |||||| |||||||||| | |||||||||  |||||| | | |     
T  5094453 ctccctatcgaataaatatgacccaaggacttccaatgctagtggcaaccccccagaatactcaactacatttctagaaatttcaacaaaatcgtttgta 5094354  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || |||| | |||| ||||||||||||||||| | |||||  ||||||||| || |||| | |||||||    
T  5094353 ggactcgcttgcttgaatgcatgccaactaaataactcaattgattcactttcaaccatgtgtttcatt 5094285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 394
Target Start/End: Original strand, 5104262 - 5104630
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    |||||||| |||| |||||| |||| || |||| |  |||| ||||||||||||||||||||||||||||||| ||  || ||||||||||||||||       
T  5104262 atttctgcaaaaagtccacatccatctaatataagtgtaacgtcatttcggtccatcccaataaagaaacaagctacatcgaggaatatttctttctcaa 5104361  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    | || |||||||||||||||||||||||| |||||||||| || ||||||| ||| ||||       |||||| ||||||  |    |||| |||  ||     
T  5104362 tgtcatcatttaaaccatcgtagcttattcttaacttcttttgtacttgattattaggaattcttttgagtttgtccaatgtacttttccattctcttac 5104461  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
     || || || || ||||| |||||||||||||| |  ||||| ||||| ||| || |||||| |||||||||| | |||| ||||  |||||||| | |     
T  5104462 ttctctatcgaataaatatgacccaaggacttccaatgctagtggcaaccccccagaatactcaactacatttctagaaaattcaataaaatcttttgtc 5104561  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || |||  | |||| ||||||||||||||||| |||||||  ||||||||| ||||||| | |||||||    
T  5104562 ggactcacttgcttgaatgcatgccaactaaatagctcaattgattcactttcatccatgtgtttcatt 5104630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 394
Target Start/End: Complemental strand, 5369072 - 5368704
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||| || |||| |||||| |||| || |||| |  ||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||       
T  5369072 atttcagcaaaaagtccacatccatctaatataagtgtaacatcatttcggtccttcccaataaagaaacaagctacatcaaggaatatttctttctcat 5368973  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
     ||| ||||||||| |||| ||||||||| |||||||||| || ||||||| ||| ||||       |||||| |||||| ||    |||| |||  ||     
T  5368972 aatcatcatttaaagcatcatagcttattcttaacttcttctgtacttgattattaggaattcttttgagtttgtccaatgcacttttccattctgttat 5368873  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
    | | || ||||||||||| |||||||  ||||| | |||||| ||||||||| || ||||||  ||||||||| | ||||||| || ||||||||         
T  5368872 ccctctgtcaaacaaatatgacccaataacttccaaagctagtggcaatcccccagaatactccactacatttctagaaattttagcaaaatctttcgca 5368773  T
Q  326 gggctcgttagcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    || |||| | ||||||||||||||||||| || |||||||  ||||||||| ||||||| | |||||||    
T  5368772 ggactcgcttgcttaaatgcatgccaactgaatagctcaattgattcactttcatccatgtgtttcatt 5368704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 26 - 357
Target Start/End: Original strand, 5133295 - 5133626
Alignment:
Q  26 atttctgcgaaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtg 125  Q
    ||||| || |||| |||||| ||||||| |||| |  |||||||||||  ||||||  ||||||| ||||||| ||||| |||||||||||||||||       
T  5133295 atttcggcaaaaagtccacaaccatttaatatatgtgtaacatcatttgtgtccatatcaataaaaaaacaagctatgttaaggaatatttctttctcaa 5133394  T
Q  126 tatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatag 225  Q
    |||| ||||||||| |||| ||||||||||||| |||||| || ||||||| ||| ||||       |||||||||||||||| |   |||||| | ||     
T  5133395 tatcttcatttaaagcatcatagcttatttttagcttcttttgtacttgattattaggaattcttctgagtttctccaatacacattgccactcgattac 5133494  T
Q  226 ctccctctcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctg 325  Q
       ||| || | |||||| |||||||||||||| |||||||||||||||||| || |||||| |||||| | | | |||||||||| |||||||| | ||    
T  5133495 actcctatctagcaaatatgacccaaggacttctagagctagaggcaatcccccagaatactcaactacgtctctagaaatttcagcaaaatcttttgtg 5133594  T
Q  326 gggctcgttagcttaaatgcatgccaactaaa 357  Q
    ||  |||    ||| |||||||||||||||||    
T  5133595 ggagtcgcattcttgaatgcatgccaactaaa 5133626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 66 - 384
Target Start/End: Original strand, 5356046 - 5356364
Alignment:
Q  66 catcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttctt 165  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||  | ||| |||||||||||||| |||||||||||||  |||||    
T  5356046 catcatttcggtcgatcccaataaagaaacaagctatgtcaagaaatatttctttctcggcatcatcatttaaaccatcatagcttatttttagtttctt 5356145  T
Q  166 atgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaataggacccaaggacttcaagagct 265  Q
     || ||||| |  || ||||       ||||||||||||  ||     ||||||   || |||||| || |||||||| |||||||||||||| |||||     
T  5356146 ttgtacttggttgttaggaattcttttgagtttctccaaggcactgtaccactccgctacctccctgtcgaacaaatacgacccaaggacttctagagcc 5356245  T
Q  266 agaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaagctcaa 365  Q
    || || |||||  || |||||| |||||||||| |||||||| |||  ||||||| | | || || | | |||| ||||||||||||||||| |||||||    
T  5356246 agcggtaatcctccagaatactcaactacatttctggaaattccagctaaatcttttgtaggacttgcttgcttgaatgcatgccaactaaatagctcaa 5356345  T
Q  366 gagattcacttccatccat 384  Q
      ||||||||  |||||||    
T  5356346 ttgattcactgtcatccat 5356364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 62 - 405
Target Start/End: Original strand, 5261572 - 5261915
Alignment:
Q  62 ataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaact 161  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||| ||     || || || ||| |||| || |||||| ||||||    
T  5261572 ataacatcatttcggtccattccaattaagaaacaagctatgtcaagaaatatttcttgctcatcgtcatctttcaaatcatcataacttattcttaact 5261671  T
Q  162 tcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaataggacccaaggacttcaag 261  Q
    |||| |||||||||||||| ||||       ||||||||||||||||  || |||||   ||  |  | | ||||||||||| |||||||||||||| ||    
T  5261672 tcttctgcacttgatcattaggaattcttttgagtttctccaatacaagaacccacttagatttcgtcttatcaaacaaataagacccaaggacttcgag 5261771  T
Q  262 agctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaagc 361  Q
    |||||| ||||||||  ||||||| | |||||||||||||| || | ||  |||||||  | | || |||| |  ||| ||||||| |||||||||||||    
T  5261772 agctagcggcaatcctccacaatattcaactacatttttggtaaatccaataaaatctcttgtaggactcgctttcttgaatgcattccaactaaaaagc 5261871  T
Q  362 tcaagagattcacttccatccatttctttcattatgtatatttt 405  Q
    ||||  |||||| || ||| ||||  | ||||| ||||||||||    
T  5261872 tcaattgattcattttcattcattgttgtcattttgtatatttt 5261915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 394
Target Start/End: Original strand, 5158907 - 5159259
Alignment:
Q  42 cacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaacc 141  Q
    |||| ||||||| |||| |  |||| ||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||     || ||||||||| |    
T  5158907 cacatccatttaatataagtgtaacgtcatttcggtccatccctataaagaaacaagctacatcaaggaatatttctttctcaaagtcatcatttaaagc 5159006  T
Q  142 atcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaa 241  Q
    |||||||||||||  |||||||||||| ||||||| ||| ||||       |||||| |||||  ||    |||| |||  || |||||| |  || |||    
T  5159007 atcgtagcttattcgtaacttcttatgtacttgattattaggaattcttttgagtttgtccaacgcacttttccattctgttacctccctattgaataaa 5159106  T
Q  242 taggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaa 341  Q
    |  ||||| |||||||| |  ||||| ||||| ||| || ||||||||||||||||| | |||||||||  |||||| | | | || |||| | |||| |    
T  5159107 tgtgaccctaggacttccaatgctagtggcaaccccccagaatacttaactacatttctagaaatttcaacaaaatcgtttgtaggactcgcttgcttga 5159206  T
Q  342 atgcatgccaactaaaaagctcaagagattcacttccatccatttctttcatt 394  Q
    |||| ||||||||||| |||||||  ||||||||| ||||||| | |||||||    
T  5159207 atgcgtgccaactaaatagctcaattgattcactttcatccatgtgtttcatt 5159259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 62 - 363
Target Start/End: Complemental strand, 5445653 - 5445355
Alignment:
Q  62 ataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaact 161  Q
    |||||||||||| |||||||||| | |||||||||||  |||| |||||||||||||||||  | ||    |||||||||||| || || ||  ||||||    
T  5445653 ataacatcattttggtccatcccgacaaagaaacaagcaatgtgaaggaatatttctttctcagcatg---atttaaaccatcataactcatccttaact 5445557  T
Q  162 tcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaataggacccaaggacttcaag 261  Q
    |||| |||||||||||||  ||||       |||| |||||||||||     ||||||| ||  |  | | | ||||||||| |||||||||||||||||    
T  5445556 tcttctgcacttgatcataaggaattcttttgagtgtctccaatacaagttcccactctgattccgtcttattaaacaaataagacccaaggacttcaag 5445457  T
Q  262 agctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaagc 361  Q
    |||||| ||||||||| || |||| | |||||||||||||||||||  |  |||||||| | | || | || | |||| ||||||| |||||||||||||    
T  5445456 agctagcggcaatccctcagaatattcaactacatttttggaaattctaacaaaatcttttgtaggacacgctcgcttgaatgcattccaactaaaaagc 5445357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 394
Target Start/End: Original strand, 5691539 - 5691869
Alignment:
Q  64 aacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttc 163  Q
    ||||||||||||  |||||||||||||||||||||  | ||||||||||||||||||||  ||||  ||| |||||||||| ||||||||| |||||||     
T  5691539 aacatcatttcgaaccatcccaataaagaaacaagccacgtcaaggaatatttctttctccgtataatcacttaaaccatcatagcttattcttaacttt 5691638  T
Q  164 ttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaataggacccaaggacttcaagag 263  Q
    || || ||||||| ||| ||||       |||||| | ||||||      ||| |||  || |  ||| ||||| ||||  |||||||||||||| | ||    
T  5691639 ttttgtacttgatgattaggaattgctttgagtttgttcaatacgctctcccattctgttaccatcctgtcaaataaatgtgacccaaggacttccaaag 5691738  T
Q  264 ctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaagctc 363  Q
    |||| ||||||||| || |||||| ||||||||||||||| | | ||| ||||||||   |||| || | | |||| || |||||||||||||| |||||    
T  5691739 ctagtggcaatcccccagaatactcaactacatttttggacaatgcagcaaaatctttcttgggtcttgcttgcttgaaagcatgccaactaaagagctc 5691838  T
Q  364 aagagattcacttccatccatttctttcatt 394  Q
     |  |||||| || ||| ||| |||||||||    
T  5691839 cattgattcattttcattcatctctttcatt 5691869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 5285740 - 5285806
Alignment:
Q  233 tcaaacaaataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttt 299  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||  ||||||| | |||||||||||    
T  5285740 tcaaacaaataagacccaaggacttcgagagctagcggcaatcctccacaatattcaactacatttt 5285806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 5285571 - 5285683
Alignment:
Q  62 ataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaact 161  Q
    ||||||||||||| |||||| ||||| ||||||||||   |||||||||||||||||| ||    ||  || || ||| |||| || |||||| ||||||    
T  5285571 ataacatcatttctgtccattccaattaagaaacaag--ctgtcaaggaatatttcttgctcatcattatctttcaaatcatcataacttattcttaact 5285668  T
Q  162 tcttatgcacttgat 176  Q
    |||| ||||||||||    
T  5285669 tcttctgcacttgat 5285683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 62 - 360
Target Start/End: Complemental strand, 8876377 - 8876079
Alignment:
Q  62 ataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaact 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    |||| ||||||| |||||| ||||||||||||||||    
T  8876377 ataacatcatttcggtccatcccaataaagaaacaagctatgtcaaggaatatttctttcgcaatatcatcatttagaccatcatagcttatttttaact 8876278  T
Q  162 tcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaacaaataggacccaaggacttcaag 261  Q
    ||| ||| |||||||||||||| |       |||||| ||||||||| |  |||||||   || | |||| ||||||||||| || ||||| ||||| ||    
T  8876277 tctcatgtacttgatcattggggatttttttgagtttttccaatacacatttccactcggctacccccctttcaaacaaatatgatccaagaacttctag 8876178  T
Q  262 agctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaag 360  Q
    |||| | ||||||||| || |||||| |||||||||| |||| ||| ||  ||||| |||||| || |||| | |||| || |||||||||||||||||    
T  8876177 agctggtggcaatcccccagaatactcaactacatttctggacattccaacaaaattttctctaggactcggttgcttgaacgcatgccaactaaaaag 8876079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 403
Target Start/End: Original strand, 22585725 - 22586088
Alignment:
Q  40 tccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaa 139  Q
    ||||||| |||||| |||  | |||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||| ||    |   || |  |||    
T  22585725 tccacagtcatttaatatgagtataacatcatttcggtccattccaattaagaaaaaagctatgtcaaggaatatttcttgctcatcagtatcttccaaa 22585824  T
Q  140 ccatcgtagcttatttttaacttcttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctctcaaaca 239  Q
     |||| || |||||| |||||||||| |||||||||||||| ||||       |||||||||||||||| |   ||| |||  || | | ||  ||||||    
T  22585825 tcatcataacttattcttaacttcttctgcacttgatcattaggaattcttttgagtttctccaatacacattgccattctgttacccctctagcaaaca 22585924  T
Q  240 aataggacccaaggacttcaagagctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagctt 339  Q
    ||||   |||||||||||| |||||||| ||||| ||  || |||| ||||| |||||  |||||||||||||||||||| || |||| |||| | ||||    
T  22585925 aataacgcccaaggacttccagagctagcggcaaccctccagaataattaaccacattcatggaaatttcagaaaaatctactttgggtctcgcttgctt 22586024  T
Q  340 aaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttcattatgtatatt 403  Q
     ||||||| |||||||||||||||||  || |||||| ||| |||| || ||||||||||||||    
T  22586025 gaatgcattccaactaaaaagctcaattgactcactttcattcattactgtcattatgtatatt 22586088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 63 - 384
Target Start/End: Original strand, 10095 - 10416
Alignment:
Q  63 taacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaactt 162  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| | |||||| |||||||||||||| ||||||| |||||||||    
T  10095 taacatcgtttcggtccatcccaataaagaaacaagctatgtcaaggaatatatctttttctgtatcatcatttaaaccatcatagcttacttttaactt 10194  T
Q  163 cttatgcacttgatcattgggaannnnnnngagtttctccaatacagaaatccactctaatagctccctct-caaacaaataggacccaaggacttcaag 261  Q
    |   || |||| ||| |||||||       || ||||||||||||| | ||||| |||  ||  ||| | | |||| |||||||| |||||||||   ||    
T  10195 ccgttgtacttcatctttgggaattattttgattttctccaatacacacatccaatctgcta-ttccgtttccaaataaataggaaccaaggactgttag 10293  T
Q  262 agctagaggcaatcccgcacaatacttaactacatttttggaaatttcagaaaaatcttctctggggctcgttagcttaaatgcatgccaactaaaaagc 361  Q
    |||||||||||||||| || | || | |||||  | ||| ||||||| |  |||||| ||||| || ||   | |||| |||||||||||||||||||||    
T  10294 agctagaggcaatcccccagagtagtgaactatttctttagaaattttaagaaaatcatctctaggcctatcttgcttgaatgcatgccaactaaaaagc 10393  T
Q  362 tcaagagattcacttccatccat 384  Q
    ||||  ||||||||  |||||||    
T  10394 tcaattgattcactatcatccat 10416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 11579 - 11632
Alignment:
Q  336 gcttaaatgcatgccaactaaaaagctcaagagattcacttccatccatttctt 389  Q
    |||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  11579 gcttgaatgcatgccaactgaaaagcttaagagattcactttcatccatttctt 11632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 11276 - 11363
Alignment:
Q  35 aaaaatccacagccatttagtatacgaataacatcatttcggtccatcccaataaagaaacaagatatgtcaaggaatatttctttct 122  Q
    ||||||||||| ||||||| |||  ||||  |||||||| | ||||||||||||||||| |||| ||| ||||| ||||||| |||||    
T  11276 aaaaatccacacccatttaatatttgaattgcatcattttgatccatcccaataaagaagcaagctatatcaagaaatatttgtttct 11363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 3268565 - 3268661
Alignment:
Q  83 ccaataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcat 179  Q
    ||||||||||||||| |||||||||| ||||| || || | |||||| |  ||||||||||| ||||||||| |||  |||| |||||||| |||||    
T  3268565 ccaataaagaaacaacatatgtcaagaaatatatccttttctgtatcattctttaaaccatcatagcttattcttagtttctcatgcactttatcat 3268661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 3326325 - 3326424
Alignment:
Q  86 ataaagaaacaagatatgtcaaggaatatttctttctgtgtatcgtcatttaaaccatcgtagcttatttttaacttcttatgcacttgatcattgggaa 185  Q
    |||||||||||| |||||||||| ||||| ||||| |   |||| || ||||||||||||||||| ||| | |  ||||  |||||||||||||||||||    
T  3326325 ataaagaaacaacatatgtcaagaaatatatctttttccatatcatcctttaaaccatcgtagctaattctcagtttctcttgcacttgatcattgggaa 3326424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 6907445 - 6907497
Alignment:
Q  339 taaatgcatgccaactaaaaagctcaagagattcacttccatccatttctttc 391  Q
    |||| ||||||||||| ||||||||||| || ||| || ||||||||||||||    
T  6907445 taaaagcatgccaactgaaaagctcaagggactcattttcatccatttctttc 6907497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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