View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19410_low_2 (Length: 403)
Name: NF19410_low_2
Description: NF19410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19410_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 1 - 388
Target Start/End: Original strand, 42798505 - 42798892
Alignment:
| Q |
1 |
aattaggaaaatcttgatccatgacaggcagggaagtgtagagcaagagggttcagacgtatatatggagctaatagactttgaatgtaatccagttgtg |
100 |
Q |
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| T |
42798505 |
aattaggaaaatcaagatccatgacaggcagggaagtgtagagcaagagggttcagacgtatatatggagctaatagactttgaatgtaatccagttgcg |
42798604 |
T |
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| Q |
101 |
atggctaactttgggataatcacagtaactggatctgttgcttttcaaaatgtttaacatgggccgttgagtggagcttgaggcagaattgtggggagtt |
200 |
Q |
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| T |
42798605 |
atggctaactttgggataatcacagtaactggatctgttgcttttcaaaatgtttaacatgggccgttgagtggagcttgaggcagaattgtggggagtt |
42798704 |
T |
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| Q |
201 |
ttagaagggttgcgacttgcaaagagtacaggttttaaagcagtggagttatgtgtggattgtgagagagactgttgttaattatgttacgcagagtaat |
300 |
Q |
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| T |
42798705 |
ttagaagggttgcgacttgcaaagagtacaggttttaaagcagtggagttatgtgtggattgtgagagagactgttgttaattatgttacgcagagtaat |
42798804 |
T |
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| Q |
301 |
gtatgaacattgttggaaaggagtcttatcgagtgtattcaaagacttgtagaaatggactgggaggtgaagatatgccactcatatc |
388 |
Q |
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| T |
42798805 |
gtatgaacattgttggaaaggagtcttatcgagtgtattcaaagacttgtagaaatggactgggaggtgaagatatgccactcgtatc |
42798892 |
T |
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