View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19411_low_1 (Length: 538)

Name: NF19411_low_1
Description: NF19411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19411_low_1
NF19411_low_1
[»] chr3 (92 HSPs)
chr3 (86-334)||(45095555-45095817)
chr3 (351-522)||(45094590-45094761)
chr3 (132-266)||(40048983-40049115)
chr3 (265-336)||(53716029-53716100)
chr3 (129-266)||(25061804-25061937)
chr3 (132-221)||(42791448-42791537)
chr3 (155-266)||(27483128-27483237)
chr3 (132-266)||(44648322-44648455)
chr3 (180-324)||(38165621-38165783)
chr3 (177-337)||(790095-790268)
chr3 (139-266)||(2567931-2568056)
chr3 (269-373)||(25061667-25061771)
chr3 (132-266)||(44854424-44854554)
chr3 (132-266)||(647504-647636)
chr3 (161-266)||(83404-83507)
chr3 (275-373)||(2568095-2568193)
chr3 (275-336)||(27483276-27483337)
chr3 (265-330)||(35239392-35239456)
chr3 (1-50)||(45095877-45095926)
chr3 (265-337)||(52202373-52202445)
chr3 (275-337)||(2988702-2988763)
chr3 (275-337)||(19552539-19552601)
chr3 (275-337)||(22730924-22730986)
chr3 (275-337)||(26965591-26965653)
chr3 (275-337)||(32303997-32304059)
chr3 (275-337)||(36771659-36771721)
chr3 (275-337)||(37225687-37225749)
chr3 (275-337)||(54933297-54933359)
chr3 (161-266)||(1340870-1340973)
chr3 (169-266)||(46362959-46363054)
chr3 (278-334)||(1341015-1341071)
chr3 (269-337)||(44648488-44648555)
chr3 (275-337)||(27027732-27027794)
chr3 (275-337)||(34059875-34059937)
chr3 (275-337)||(43169333-43169395)
chr3 (268-334)||(41287078-41287146)
chr3 (132-228)||(16240713-16240808)
chr3 (131-190)||(2458191-2458250)
chr3 (192-266)||(22731041-22731112)
chr3 (275-337)||(46363102-46363165)
chr3 (275-337)||(83295-83356)
chr3 (192-266)||(2662464-2662536)
chr3 (287-337)||(3000751-3000801)
chr3 (287-337)||(13485909-13485959)
chr3 (287-337)||(15514830-15514880)
chr3 (132-266)||(31290886-31291017)
chr3 (275-337)||(31291056-31291118)
chr3 (160-234)||(43580619-43580692)
chr3 (132-221)||(4476274-4476363)
chr3 (132-221)||(42740374-42740463)
chr3 (275-336)||(42857151-42857212)
chr3 (275-392)||(44645281-44645399)
chr3 (16-61)||(45095905-45095950)
chr3 (282-330)||(25722560-25722608)
chr3 (130-221)||(27027889-27027977)
chr3 (180-264)||(38457571-38457653)
chr3 (130-190)||(41850564-41850624)
chr3 (191-266)||(35239470-35239543)
chr3 (171-266)||(36771527-36771620)
chr3 (275-337)||(43580474-43580537)
chr3 (287-330)||(43687990-43688033)
chr3 (275-337)||(4391903-4391965)
chr3 (132-234)||(4392035-4392136)
chr3 (275-373)||(20512588-20512687)
chr3 (275-337)||(36310342-36310404)
chr3 (132-266)||(43736783-43736913)
chr3 (287-337)||(51381720-51381770)
chr3 (275-337)||(54261414-54261476)
chr3 (132-266)||(54933115-54933247)
chr3 (172-221)||(5244736-5244785)
chr3 (275-324)||(35099458-35099507)
chr3 (275-336)||(38457460-38457521)
chr3 (168-251)||(27039452-27039531)
chr3 (161-221)||(35099316-35099376)
chr3 (266-330)||(42791334-42791397)
chr3 (167-234)||(43599495-43599561)
chr3 (275-330)||(43600283-43600337)
chr3 (286-337)||(44854314-44854365)
chr3 (275-337)||(647684-647745)
chr3 (287-337)||(5244585-5244635)
chr3 (131-221)||(15514646-15514736)
chr3 (180-266)||(19552640-19552725)
chr3 (192-266)||(26965480-26965552)
chr3 (132-190)||(36460988-36461046)
chr3 (287-337)||(49470788-49470838)
chr3 (275-337)||(50420258-50420319)
chr3 (139-228)||(42857010-42857098)
chr3 (275-312)||(52222837-52222874)
chr3 (180-244)||(9167649-9167711)
chr3 (275-330)||(22414761-22414817)
chr3 (132-184)||(47138154-47138206)
chr3 (132-204)||(51398179-51398251)
[»] chr1 (76 HSPs)
chr1 (132-337)||(84430-84648)
chr1 (180-337)||(24040984-24041155)
chr1 (155-266)||(37437338-37437448)
chr1 (132-266)||(28751320-28751452)
chr1 (180-266)||(5317537-5317622)
chr1 (272-369)||(38132257-38132354)
chr1 (132-264)||(45749411-45749541)
chr1 (132-266)||(48259775-48259907)
chr1 (132-246)||(50349769-50349881)
chr1 (192-336)||(1430508-1430666)
chr1 (178-266)||(1428974-1429061)
chr1 (139-330)||(43755058-43755260)
chr1 (135-266)||(30006238-30006367)
chr1 (275-337)||(48259946-48260008)
chr1 (268-337)||(15698836-15698905)
chr1 (268-337)||(26582923-26582992)
chr1 (169-264)||(43105551-43105644)
chr1 (275-337)||(11650056-11650118)
chr1 (275-337)||(12002244-12002306)
chr1 (275-337)||(26252116-26252178)
chr1 (139-266)||(48319924-48320045)
chr1 (265-330)||(49894811-49894876)
chr1 (139-234)||(6377205-6377299)
chr1 (275-330)||(17919912-17919967)
chr1 (275-330)||(44582872-44582927)
chr1 (275-337)||(5317669-5317731)
chr1 (168-266)||(12002354-12002450)
chr1 (275-337)||(12851739-12851801)
chr1 (279-337)||(17806471-17806529)
chr1 (275-336)||(1428865-1428926)
chr1 (170-251)||(40060856-40060935)
chr1 (268-337)||(43738339-43738408)
chr1 (289-337)||(9552436-9552484)
chr1 (177-332)||(10690912-10691080)
chr1 (275-330)||(45377242-45377297)
chr1 (275-337)||(2459006-2459068)
chr1 (140-266)||(17919741-17919864)
chr1 (275-337)||(22664937-22664999)
chr1 (275-337)||(43929683-43929745)
chr1 (180-265)||(2245897-2245980)
chr1 (145-266)||(6332275-6332394)
chr1 (269-337)||(9333105-9333174)
chr1 (269-337)||(9356878-9356947)
chr1 (275-324)||(28751500-28751549)
chr1 (132-197)||(49426329-49426394)
chr1 (275-335)||(42650342-42650402)
chr1 (269-337)||(48320077-48320144)
chr1 (275-330)||(50158398-50158454)
chr1 (280-337)||(50349953-50350012)
chr1 (275-337)||(255005-255068)
chr1 (275-337)||(15647155-15647215)
chr1 (139-194)||(32806855-32806910)
chr1 (287-330)||(40061001-40061044)
chr1 (275-330)||(40719020-40719075)
chr1 (282-337)||(44583770-44583825)
chr1 (287-337)||(6332164-6332214)
chr1 (180-266)||(43929792-43929876)
chr1 (275-337)||(44024543-44024605)
chr1 (132-190)||(44108784-44108842)
chr1 (275-332)||(2245789-2245846)
chr1 (161-266)||(15698691-15698795)
chr1 (270-330)||(50591383-50591444)
chr1 (161-233)||(40719155-40719226)
chr1 (139-194)||(5854143-5854198)
chr1 (131-194)||(11134371-11134434)
chr1 (132-190)||(5463758-5463816)
chr1 (275-337)||(5854318-5854380)
chr1 (290-336)||(11134568-11134614)
chr1 (180-266)||(11650166-11650250)
chr1 (132-234)||(12851871-12851972)
chr1 (180-266)||(52403584-52403668)
chr1 (168-221)||(15647021-15647074)
chr1 (267-334)||(43105662-43105732)
chr1 (180-263)||(44583883-44583963)
chr1 (132-228)||(45377071-45377166)
chr1 (132-200)||(49468621-49468689)
[»] chr2 (51 HSPs)
chr2 (139-371)||(34225737-34225983)
chr2 (139-334)||(14378167-14378375)
chr2 (132-266)||(40987194-40987326)
chr2 (265-336)||(4766270-4766341)
chr2 (155-266)||(36360310-36360419)
chr2 (275-337)||(29795282-29795344)
chr2 (275-335)||(7743401-7743461)
chr2 (275-330)||(4840819-4840874)
chr2 (131-266)||(24775297-24775430)
chr2 (275-334)||(39866765-39866824)
chr2 (275-337)||(2459771-2459833)
chr2 (275-337)||(4536572-4536634)
chr2 (275-337)||(18374856-18374918)
chr2 (168-266)||(29795147-29795243)
chr2 (275-337)||(33093366-33093428)
chr2 (269-337)||(14698010-14698078)
chr2 (265-337)||(45148035-45148106)
chr2 (139-266)||(7743509-7743634)
chr2 (275-337)||(1381748-1381810)
chr2 (172-266)||(4840679-4840771)
chr2 (132-221)||(42970040-42970129)
chr2 (275-331)||(40987363-40987419)
chr2 (287-337)||(1360175-1360225)
chr2 (132-194)||(4133201-4133263)
chr2 (287-337)||(6591963-6592013)
chr2 (275-337)||(10580950-10581012)
chr2 (287-337)||(24775187-24775237)
chr2 (275-337)||(43388749-43388811)
chr2 (131-200)||(30855278-30855347)
chr2 (286-375)||(775988-776077)
chr2 (279-326)||(16316718-16316765)
chr2 (192-266)||(1298752-1298824)
chr2 (288-330)||(1298885-1298927)
chr2 (132-234)||(4536701-4536802)
chr2 (132-194)||(25383397-25383459)
chr2 (275-337)||(41984416-41984478)
chr2 (299-337)||(45372648-45372686)
chr2 (195-264)||(1381849-1381916)
chr2 (180-221)||(6592107-6592148)
chr2 (275-330)||(36360465-36360520)
chr2 (275-337)||(43344315-43344375)
chr2 (132-194)||(441143-441205)
chr2 (275-337)||(25332569-25332630)
chr2 (132-194)||(25332750-25332812)
chr2 (180-266)||(40410551-40410635)
chr2 (132-221)||(44228617-44228707)
chr2 (275-336)||(14511459-14511520)
chr2 (180-266)||(37106970-37107056)
chr2 (161-221)||(1360319-1360379)
chr2 (180-220)||(14511602-14511642)
chr2 (282-334)||(42969900-42969952)
[»] chr5 (70 HSPs)
chr5 (132-266)||(36660534-36660666)
chr5 (139-266)||(12167529-12167654)
chr5 (275-337)||(14980131-14980193)
chr5 (265-337)||(4011718-4011790)
chr5 (131-266)||(166560-166693)
chr5 (275-337)||(166741-166803)
chr5 (275-337)||(42329638-42329700)
chr5 (132-221)||(4371502-4371591)
chr5 (161-266)||(43257801-43257904)
chr5 (277-337)||(793700-793760)
chr5 (275-333)||(15400174-15400232)
chr5 (275-337)||(33585067-33585129)
chr5 (275-337)||(36660426-36660488)
chr5 (275-337)||(38982237-38982299)
chr5 (132-221)||(4751442-4751531)
chr5 (265-337)||(31889741-31889814)
chr5 (265-330)||(41845364-41845429)
chr5 (275-330)||(29653606-29653661)
chr5 (139-266)||(36783464-36783589)
chr5 (275-334)||(43257943-43258002)
chr5 (275-337)||(13066712-13066774)
chr5 (132-266)||(14979963-14980095)
chr5 (275-337)||(27810345-27810407)
chr5 (275-337)||(31557427-31557489)
chr5 (287-337)||(34171163-34171213)
chr5 (177-266)||(31557297-31557385)
chr5 (143-263)||(34919847-34919965)
chr5 (131-194)||(29807225-29807288)
chr5 (131-194)||(42103974-42104037)
chr5 (287-337)||(4371362-4371412)
chr5 (275-337)||(7388273-7388335)
chr5 (268-330)||(32690816-32690878)
chr5 (168-221)||(4742214-4742267)
chr5 (287-365)||(7731697-7731775)
chr5 (132-221)||(33693882-33693971)
chr5 (276-337)||(34919752-34919813)
chr5 (161-221)||(12992205-12992265)
chr5 (275-337)||(4742358-4742421)
chr5 (275-337)||(4751622-4751685)
chr5 (275-337)||(12992063-12992123)
chr5 (191-266)||(15400280-15400354)
chr5 (275-334)||(28640084-28640143)
chr5 (287-375)||(32963111-32963199)
chr5 (275-330)||(33822595-33822650)
chr5 (275-337)||(36296226-36296286)
chr5 (275-330)||(36783361-36783416)
chr5 (275-337)||(4833725-4833787)
chr5 (180-266)||(4967451-4967535)
chr5 (180-266)||(31889828-31889912)
chr5 (139-221)||(38982073-38982155)
chr5 (177-246)||(17674329-17674396)
chr5 (131-200)||(21375561-21375630)
chr5 (161-221)||(13066856-13066916)
chr5 (129-221)||(24436449-24436541)
chr5 (293-337)||(27658682-27658726)
chr5 (132-200)||(42661852-42661920)
chr5 (180-266)||(1513088-1513172)
chr5 (294-337)||(12167693-12167736)
chr5 (275-330)||(16886091-16886146)
chr5 (131-194)||(21375480-21375543)
chr5 (291-334)||(29051620-29051663)
chr5 (286-337)||(39059805-39059856)
chr5 (132-190)||(2729698-2729756)
chr5 (287-337)||(17674207-17674257)
chr5 (132-190)||(26660937-26660995)
chr5 (132-190)||(26932530-26932588)
chr5 (275-337)||(33741464-33741526)
chr5 (178-266)||(8960993-8961078)
chr5 (347-375)||(3025097-3025125)
chr5 (190-266)||(39059914-39059988)
[»] scaffold0072 (2 HSPs)
scaffold0072 (132-266)||(11994-12125)
scaffold0072 (275-330)||(12164-12219)
[»] chr8 (63 HSPs)
chr8 (132-337)||(38328967-38329184)
chr8 (132-266)||(27109732-27109865)
chr8 (275-337)||(9022393-9022455)
chr8 (275-370)||(36915332-36915427)
chr8 (265-330)||(7129306-7129371)
chr8 (265-330)||(18666603-18666668)
chr8 (269-337)||(8471279-8471347)
chr8 (131-266)||(36915473-36915606)
chr8 (275-337)||(1774152-1774214)
chr8 (275-337)||(5588566-5588628)
chr8 (275-337)||(14541838-14541900)
chr8 (275-337)||(27109913-27109975)
chr8 (275-337)||(32061516-32061578)
chr8 (125-266)||(32326630-32326769)
chr8 (275-335)||(3095596-3095656)
chr8 (142-266)||(22601243-22601365)
chr8 (269-337)||(29931318-29931386)
chr8 (155-266)||(45187231-45187340)
chr8 (139-221)||(2803174-2803256)
chr8 (275-337)||(22601134-22601195)
chr8 (275-337)||(35052469-35052531)
chr8 (265-330)||(41790199-41790265)
chr8 (187-264)||(6839317-6839392)
chr8 (275-335)||(34461676-34461737)
chr8 (132-221)||(41414983-41415072)
chr8 (132-264)||(9022506-9022636)
chr8 (192-266)||(5588440-5588511)
chr8 (287-334)||(8382582-8382629)
chr8 (275-337)||(11257540-11257600)
chr8 (275-330)||(34168298-34168353)
chr8 (275-337)||(156239-156301)
chr8 (275-337)||(7612496-7612558)
chr8 (132-194)||(39463436-39463498)
chr8 (275-336)||(30788934-30788995)
chr8 (265-337)||(11336091-11336162)
chr8 (275-387)||(18673192-18673305)
chr8 (286-337)||(2803341-2803392)
chr8 (269-328)||(2812817-2812876)
chr8 (287-330)||(16208955-16208998)
chr8 (275-330)||(33870759-33870814)
chr8 (132-234)||(8382399-8382500)
chr8 (288-330)||(27416506-27416548)
chr8 (192-266)||(30789043-30789115)
chr8 (287-337)||(42946120-42946170)
chr8 (161-234)||(2812915-2812987)
chr8 (287-327)||(8107264-8107304)
chr8 (275-334)||(26438976-26439035)
chr8 (180-266)||(7612606-7612689)
chr8 (287-330)||(32326830-32326873)
chr8 (275-330)||(32661310-32661365)
chr8 (286-337)||(39970323-39970374)
chr8 (180-230)||(37185622-37185671)
chr8 (287-337)||(45187389-45187439)
chr8 (180-221)||(156371-156412)
chr8 (168-221)||(8106836-8106889)
chr8 (277-330)||(13108993-13109045)
chr8 (139-200)||(17921130-17921191)
chr8 (142-219)||(32661449-32661526)
chr8 (161-234)||(39970455-39970527)
chr8 (234-266)||(8471367-8471399)
chr8 (180-264)||(32737875-32737957)
chr8 (132-200)||(34461494-34461562)
chr8 (287-331)||(43938124-43938168)
[»] chr4 (83 HSPs)
chr4 (139-337)||(32140908-32141119)
chr4 (265-337)||(51930595-51930667)
chr4 (265-337)||(56556337-56556410)
chr4 (132-232)||(29840193-29840292)
chr4 (265-337)||(50072276-50072348)
chr4 (275-371)||(22212302-22212398)
chr4 (155-266)||(34360110-34360219)
chr4 (131-221)||(30492868-30492958)
chr4 (275-337)||(31941553-31941615)
chr4 (132-266)||(36805366-36805497)
chr4 (265-337)||(21045151-21045224)
chr4 (269-337)||(15501234-15501302)
chr4 (275-334)||(31987302-31987361)
chr4 (275-337)||(52732594-52732657)
chr4 (275-337)||(6462004-6462066)
chr4 (275-337)||(19849079-19849141)
chr4 (275-337)||(24259606-24259668)
chr4 (168-266)||(34096121-34096217)
chr4 (132-266)||(42672494-42672626)
chr4 (132-221)||(22212489-22212578)
chr4 (265-337)||(31817261-31817331)
chr4 (185-266)||(37445765-37445844)
chr4 (275-386)||(36805538-36805651)
chr4 (269-337)||(38692409-38692477)
chr4 (265-337)||(39671167-39671238)
chr4 (275-337)||(19282504-19282567)
chr4 (275-330)||(28116247-28116302)
chr4 (275-334)||(45520553-45520611)
chr4 (275-337)||(47321139-47321202)
chr4 (192-266)||(15501129-15501201)
chr4 (275-337)||(17499812-17499874)
chr4 (287-337)||(29840070-29840120)
chr4 (275-337)||(30022063-30022125)
chr4 (139-221)||(32140798-32140880)
chr4 (275-337)||(34124290-34124352)
chr4 (275-337)||(37445655-37445717)
chr4 (275-337)||(43421210-43421272)
chr4 (275-337)||(51434352-51434414)
chr4 (130-194)||(41920223-41920287)
chr4 (275-337)||(35928486-35928548)
chr4 (180-266)||(45520421-45520505)
chr4 (276-330)||(45903501-45903555)
chr4 (173-266)||(19849189-19849280)
chr4 (275-328)||(30492732-30492785)
chr4 (180-267)||(51737285-51737368)
chr4 (187-266)||(52732696-52732773)
chr4 (132-194)||(2728314-2728376)
chr4 (180-266)||(21045238-21045322)
chr4 (134-204)||(34534008-34534078)
chr4 (180-266)||(39671069-39671153)
chr4 (180-266)||(43421087-43421171)
chr4 (180-266)||(44855349-44855433)
chr4 (132-194)||(56373491-56373553)
chr4 (287-336)||(17317950-17317999)
chr4 (180-221)||(45049847-45049888)
chr4 (180-221)||(51906274-51906315)
chr4 (132-263)||(56556194-56556320)
chr4 (130-190)||(37654593-37654653)
chr4 (132-200)||(39984990-39985058)
chr4 (290-337)||(1868208-1868255)
chr4 (275-334)||(29289985-29290044)
chr4 (187-266)||(51930681-51930758)
chr4 (139-194)||(52957713-52957768)
chr4 (275-334)||(54512030-54512089)
chr4 (288-335)||(55126494-55126541)
chr4 (287-337)||(6232141-6232191)
chr4 (132-194)||(28116422-28116484)
chr4 (287-337)||(34096010-34096060)
chr4 (180-230)||(38692521-38692570)
chr4 (279-325)||(44835341-44835387)
chr4 (279-329)||(44855245-44855295)
chr4 (268-334)||(45049707-45049773)
chr4 (287-337)||(54091953-54092003)
chr4 (139-200)||(34316393-34316454)
chr4 (180-221)||(54092097-54092138)
chr4 (277-330)||(54233848-54233900)
chr4 (177-266)||(54512128-54512215)
chr4 (302-334)||(3093351-3093383)
chr4 (132-204)||(19878817-19878889)
chr4 (234-266)||(24259718-24259750)
chr4 (142-194)||(27653853-27653905)
chr4 (161-221)||(30022215-30022275)
chr4 (133-189)||(49080394-49080450)
[»] chr7 (59 HSPs)
chr7 (132-266)||(42259461-42259593)
chr7 (182-337)||(18886668-18886836)
chr7 (275-372)||(28044224-28044321)
chr7 (139-264)||(33056203-33056327)
chr7 (275-337)||(43813437-43813499)
chr7 (275-379)||(36836015-36836120)
chr7 (275-337)||(3681015-3681077)
chr7 (275-337)||(17869236-17869298)
chr7 (275-337)||(30514972-30515034)
chr7 (275-337)||(31416844-31416906)
chr7 (275-382)||(36447163-36447270)
chr7 (182-266)||(34733418-34733500)
chr7 (287-334)||(19920376-19920423)
chr7 (132-264)||(40207299-40207432)
chr7 (143-266)||(42121651-42121772)
chr7 (275-337)||(1103483-1103545)
chr7 (168-266)||(17869346-17869442)
chr7 (275-337)||(19906413-19906475)
chr7 (275-337)||(22597229-22597291)
chr7 (275-337)||(32275203-32275265)
chr7 (168-266)||(32275304-32275400)
chr7 (287-337)||(32873268-32873318)
chr7 (275-337)||(36447694-36447756)
chr7 (275-337)||(40298846-40298908)
chr7 (132-234)||(40298978-40299079)
chr7 (269-337)||(42121549-42121618)
chr7 (275-327)||(34002225-34002277)
chr7 (187-266)||(3680890-3680967)
chr7 (275-330)||(19288440-19288495)
chr7 (287-330)||(22627451-22627494)
chr7 (275-330)||(42044072-42044127)
chr7 (132-194)||(1742170-1742232)
chr7 (287-337)||(18733452-18733502)
chr7 (180-266)||(22627314-22627398)
chr7 (275-337)||(32345928-32345990)
chr7 (275-337)||(41906026-41906088)
chr7 (286-330)||(5723009-5723053)
chr7 (275-334)||(26527489-26527548)
chr7 (287-334)||(40805026-40805073)
chr7 (275-337)||(26963478-26963540)
chr7 (275-337)||(42259641-42259702)
chr7 (132-221)||(18733586-18733675)
chr7 (198-266)||(42010553-42010619)
chr7 (275-334)||(30833186-30833245)
chr7 (275-337)||(10684923-10684985)
chr7 (155-221)||(19920218-19920284)
chr7 (132-194)||(27947411-27947473)
chr7 (192-266)||(28044113-28044185)
chr7 (142-204)||(31416672-31416734)
chr7 (180-266)||(34002092-34002177)
chr7 (180-266)||(41905895-41905979)
chr7 (162-264)||(47272262-47272362)
chr7 (168-246)||(48838628-48838704)
chr7 (346-375)||(33056443-33056472)
chr7 (234-266)||(10684841-10684873)
chr7 (132-200)||(19906587-19906655)
chr7 (234-266)||(26963590-26963622)
chr7 (278-330)||(39117584-39117636)
chr7 (275-334)||(47271727-47271787)
[»] chr6 (34 HSPs)
chr6 (163-266)||(12828624-12828725)
chr6 (275-337)||(6143082-6143144)
chr6 (275-337)||(12828773-12828835)
chr6 (275-373)||(29927169-29927268)
chr6 (275-337)||(32258720-32258782)
chr6 (275-337)||(34576542-34576604)
chr6 (177-266)||(23936540-23936628)
chr6 (275-375)||(31275733-31275835)
chr6 (275-337)||(29915539-29915602)
chr6 (275-337)||(4132067-4132129)
chr6 (275-337)||(6140598-6140659)
chr6 (275-337)||(10494854-10494916)
chr6 (275-337)||(17345228-17345290)
chr6 (172-266)||(29915650-29915743)
chr6 (286-337)||(8052343-8052394)
chr6 (191-266)||(29927316-29927389)
chr6 (287-337)||(1924768-1924818)
chr6 (275-337)||(4123947-4124009)
chr6 (275-337)||(11785195-11785255)
chr6 (132-266)||(31275553-31275685)
chr6 (180-266)||(34439368-34439453)
chr6 (287-330)||(3015921-3015964)
chr6 (275-330)||(26669190-26669245)
chr6 (139-221)||(30627233-30627315)
chr6 (275-337)||(34439506-34439567)
chr6 (168-221)||(8052486-8052539)
chr6 (275-336)||(23936674-23936735)
chr6 (139-194)||(1135104-1135159)
chr6 (294-337)||(19689945-19689988)
chr6 (275-337)||(26189506-26189568)
chr6 (132-194)||(29713318-29713380)
chr6 (287-337)||(30627089-30627139)
chr6 (234-266)||(6992511-6992543)
chr6 (218-266)||(26669095-26669142)
[»] scaffold0003 (1 HSPs)
scaffold0003 (275-337)||(321724-321786)
[»] scaffold0189 (2 HSPs)
scaffold0189 (275-337)||(13151-13213)
scaffold0189 (161-232)||(13009-13079)
[»] scaffold0886 (2 HSPs)
scaffold0886 (275-337)||(4201-4263)
scaffold0886 (177-266)||(4065-4153)
[»] scaffold0047 (1 HSPs)
scaffold0047 (275-337)||(70547-70609)
[»] scaffold0758 (1 HSPs)
scaffold0758 (132-190)||(6239-6297)
[»] scaffold0119 (2 HSPs)
scaffold0119 (275-330)||(1548-1603)
scaffold0119 (218-266)||(1651-1698)
[»] scaffold0194 (1 HSPs)
scaffold0194 (287-337)||(8156-8206)
[»] scaffold0060 (2 HSPs)
scaffold0060 (293-337)||(31623-31667)
scaffold0060 (163-221)||(31695-31753)
[»] scaffold0580 (4 HSPs)
scaffold0580 (287-330)||(1646-1691)
scaffold0580 (180-258)||(1690-1766)
scaffold0580 (287-330)||(9385-9430)
scaffold0580 (180-258)||(9429-9505)
[»] scaffold0519 (1 HSPs)
scaffold0519 (275-337)||(7792-7852)
[»] scaffold0110 (1 HSPs)
scaffold0110 (132-200)||(24652-24720)
[»] scaffold0048 (1 HSPs)
scaffold0048 (146-194)||(62812-62860)


Alignment Details
Target: chr3 (Bit Score: 182; Significance: 4e-98; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 86 - 334
Target Start/End: Complemental strand, 45095817 - 45095555
Alignment:
Q  86 atattcttcatctttcaatagtatcatccatatacgttgaaatttctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaag 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  45095817 atattcttcatctttcaatagtatcatccatatacgttgaaatttctactccctccgtttcaaaatgattgtcgctttagctaattgcacgcatattaag 45095718  T
Q  186 gaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa-gtgtgagagaaaagttgga- 283  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  45095717 gaatggaatgaaataatcattaaacataacacattttactaaaatgccccttactttataagaaaaggacaaacttaaaggtgtgagagaaaagttggag 45095618  T
Q  284 agg------------aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||            ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  45095617 agggtaaagttggaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 45095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 351 - 522
Target Start/End: Complemental strand, 45094761 - 45094590
Alignment:
Q  351 agcgacacttattttgaaacggatgagtaatatttttaagcattgatctaagatagaccatttattaagaactcaatcttaacttaatgctcgcatttaa 450  Q
    ||||||||||||||| |||  || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  45094761 agcgacacttattttaaaagagaggagtaatatttttaagtattgatctaagatagaccatttattaagacctcaatcttaacttaatactcgcatttaa 45094662  T
Q  451 atgaaatccacctacttacgtgagtttcacaaaatttaggtaaagccgtataaatttcaacaacttaaaaat 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45094661 atgaaatccacctacttacgtgagtttcacaaaatttaggtaaagccgtataaatttcaacaacttaaaaat 45094590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 40049115 - 40048983
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||||| |||| ||||||||| |||||| |  |||||||||||||||||||||||||||| ||||||||| ||||| |||| ||    
T  40049115 tactccctccgttttaaaattagtgtcgctttagctatttgcacacgaattaaggaatggaatgaaataatcattagacataacac-ttttattaaattg 40049017  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     || |||||||||||||||| |||||| |||||||    
T  40049016 -cctttactttataagaaaaagacaaatttaaagt 40048983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 53716100 - 53716029
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  53716100 gtgtgagagaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 129 - 266
Target Start/End: Complemental strand, 25061937 - 25061804
Alignment:
Q  129 ttctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaa 228  Q
    ||||||||| ||||||| ||||| | ||||  ||||||  ||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  25061937 ttctactccatccgtttaaaaatgagtgtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacac-ttttactaaa 25061839  T
Q  229 atgccccttactttataagaaaaggacaaacttaaagt 266  Q
     |  |||||||||||||||||||  |||||||||||||    
T  25061838 ct-acccttactttataagaaaa--acaaacttaaagt 25061804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 42791537 - 42791448
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| ||||||||||||| | ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  42791537 tactccatccgtttcaaaatgagtgtcattttagccaattgcacgcatattaaggaatgtaatgaaataatcattagacataatactttt 42791448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 27483128 - 27483237
Alignment:
Q  155 tgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaagga 254  Q
    |||| |||||||  ||||||| || ||||||||||| |||||||||||||||| ||||||||| ||||||| ||||  ||||||||||||||||||| ||    
T  27483128 tgtcgctttagcccattgcacacaaattaaggaatgaaatgaaataatcattagacataacac-ttttact-aaatttcccttactttataagaaaaaga 27483225  T
Q  255 caaacttaaagt 266  Q
    ||||||||||||    
T  27483226 caaacttaaagt 27483237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 44648322 - 44648455
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | ||||  |||||| |||||||| || ||||||||||| |||||||||||||||| ||||||||| |||||||||| ||    
T  44648322 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaataatcattagacataacac-ttttactaaactg 44648420  T
Q  232 ccccttactttataag-aaaaggacaaacttaaagt 266  Q
     || ||||||||| || |||| ||||||||||||||    
T  44648421 -cctttactttatgagaaaaaagacaaacttaaagt 44648455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 38165621 - 38165783
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt------------- 266  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| || || |||||||||||||||| ||||||||||||||                 
T  38165621 attaaggaatgtaatgaaataatcattaaacataacactttt-actaaactgtcc-ttactttataagaaaaagacaaacttaaagttgcattggatgga 38165718  T
Q  267 ------gtgagagaaaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacatt 324  Q
          ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  38165719 aattgtgtgagagaaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacatt 38165783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 177 - 337
Target Start/End: Complemental strand, 790268 - 790095
Alignment:
Q  177 catattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt---------- 266  Q
    ||||||||| |||| ||||||||||||||| || ||||| ||||| |||||| ||||| |||||||||||||||| | |||| |||||||              
T  790268 catattaagaaatgtaatgaaataatcattgaatataacgctttt-actaaactgccc-ttactttataagaaaaagtcaaaattaaagttgcattggaa 790171  T
Q  267 -----gtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
         |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  790170 attgtgtgagagaaaagtttgaagaaaaaaattaaagttgtattggaaatgtaaagtgacattaattttgaaacaa 790095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 2567931 - 2568056
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||| ||||| | ||||  |||||| ||||||||  | |||||||||| ||||||||||||||||| | ||||||| |||||| ||||||  |||||    
T  2567931 tccgttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagatataacac-ttttacaaaaatg-tcctta 2568028  T
Q  239 ctttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||| ||||||||||||||    
T  2568029 ctttataagaaaaagacaaacttaaagt 2568056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 373
Target Start/End: Complemental strand, 25061771 - 25061667
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaa 368  Q
    ||||| |||||||| || ||||||||||| ||||||||||||||||||||| |||||||||||||||||       | |||||| |||||| ||||||||    
T  25061771 gagagtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttaaaacaatttttttggctaaagtgacactcattttgaa 25061672  T
Q  369 acgga 373  Q
    |||||    
T  25061671 acgga 25061667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 44854554 - 44854424
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| ||||||  |||||| ||||||||  | ||||| |||| ||||||||||||||||| ||  ||||| |||||||||| ||    
T  44854554 tactccatccgtttcaaaatgattgtcgttttagccaattgcacatagattaatgaattgaatgaaataatcattagac--aacac-ttttactaaactg 44854458  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     |||||||||||||||||||  |||||||||||||    
T  44854457 -cccttactttataagaaaaatacaaacttaaagt 44854424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 647504 - 647636
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| || |||||||||| | ||||  |||| | |||||||| || |||||| |||| |||||||||||||||| | ||||||  |||||||||| ||    
T  647504 tactccctcggtttcaaaataagtgtcgttttacccaattgcacacagattaagaaatgaaatgaaataatcattagatataaca-gttttactaaactg 647602  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     ||||||||||||||||||| ||||||||||||||    
T  647603 -cccttactttataagaaaaagacaaacttaaagt 647636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 266
Target Start/End: Complemental strand, 83507 - 83404
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaact 260  Q
    |||||| |||||||| || ||||||||||| |||||| ||||||||| ||| ||||| |||||||||| |  ||||||||||||||||||| ||||||||    
T  83507 tttagccaattgcacacaaattaaggaatgaaatgaattaatcattagacacaacac-ttttactaaact-acccttactttataagaaaaagacaaact 83410  T
Q  261 taaagt 266  Q
    ||||||    
T  83409 taaagt 83404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 373
Target Start/End: Original strand, 2568095 - 2568193
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacgga 373  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||       ||||||||||||| | ||||| |||||||    
T  2568095 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacaatttttttgactaaagcgacattcattttaaaacgga 2568193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 27483276 - 27483337
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  27483276 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 27483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 35239456 - 35239392
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  35239456 gtgtgagagaaaagttggaag-aaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 35239392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45095926 - 45095877
Alignment:
Q  1 gcatatgtggaaatttctaataagaaaaatctaaaatataaatatgtgga 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45095926 gcatatgtggaaatttctaataagaaaaatctaaaatataaatatgtgga 45095877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 52202373 - 52202445
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||  |||||||||||||||||||    
T  52202373 gtgtgagagaaaagttggaagaaaaaaattaaagttgtattgaaaatgcaaaacgacattcattttaaaacaa 52202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 2988702 - 2988763
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  2988702 aaagttggaagaaaaaaattaaatt-gtattggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 19552601 - 19552539
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  19552601 aaagttggaagaaaaaatttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 19552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 22730986 - 22730924
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  22730986 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 26965591 - 26965653
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  26965591 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 26965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 32303997 - 32304059
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  32303997 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttcaaaacaa 32304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 36771659 - 36771721
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  36771659 aaagttgaaagtaaaaaattaaagttgtattgtaaatgtaaagtgacattcattttaaaacaa 36771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 37225687 - 37225749
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  37225687 aaagttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 54933297 - 54933359
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  54933297 aaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 1340870 - 1340973
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaact 260  Q
    |||||| ||||||||  | ||||| ||||||||||||||||| |||| |||||||||||||| ||||| ||  | |||||||||||||||| ||||||||    
T  1340870 tttagcaaattgcacatagattaaagaatggaatgaaataataattagacataacacttttt-ctaaagtg-tctttactttataagaaaaagacaaact 1340967  T
Q  261 taaagt 266  Q
    ||||||    
T  1340968 taaagt 1340973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 46362959 - 46363054
Alignment:
Q  169 attgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||| ||||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||  ||||||||||||||||||  ||||| |||||||    
T  46362959 attgcacacatattaaggaattgaatgaaataatcattagacctaaca-tttttactaaactg-tccttactttataagaaaaatacaaatttaaagt 46363054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 1341015 - 1341071
Alignment:
Q  278 gttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  1341015 gttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 1341071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 44648488 - 44648555
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||| ||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  44648488 gagagtaaagttggaaaaaaaaaat-aaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 27027794 - 27027732
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  27027794 aaagtttgaagaaaaaaattaaatttgtattggaaatgtaaattgacattaattttgaaacaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 34059937 - 34059875
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  34059937 aaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 34059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 43169395 - 43169333
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||| |||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  43169395 aaagttagaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 43169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 41287146 - 41287078
Alignment:
Q  268 tgagagaaaagttggaaggaaaaaa--ttaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||| ||||||||||||| ||||||  ||||| ||||||||||||||||||||||||| ||||||||||    
T  41287146 tgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacatccattttaaaa 41287078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 16240808 - 16240713
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaa 228  Q
    |||||| ||||||||||||| | ||||  ||||||  ||||||| || |||| |||||| |||||||||||||||| |||||||| |||||||||||    
T  16240808 tactccatccgtttcaaaatgagtgtcgttttagcctattgcacacaaattagggaatgaaatgaaataatcattagacataaca-tttttactaaa 16240713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 2458250 - 2458191
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    ||||||| ||||||||||||| | |||||||||||| |||||||| ||||||||||||||    
T  2458250 ctactccctccgtttcaaaatgagtgtcactttagccaattgcacacatattaaggaatg 2458191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 22731112 - 22731041
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||||||||||||| ||||||||||| ||  ||| | |||||||||||| ||||||||||||||    
T  22731112 aatgaaataatcattaaacataaca-tttttactaaactg--cctcaatttataagaaaaagacaaacttaaagt 22731041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 46363102 - 46363165
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  46363102 aaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 83356 - 83295
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  83356 aaagttggaag-aaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 2662464 - 2662536
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||| ||||||||| |||||||||| || |||||| |||||||||||| |||||| |||||||    
T  2662464 aatgaaataatcattagacataacac-ttttactaaattg-cccttattttataagaaaaagacaaatttaaagt 2662536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 3000801 - 3000751
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  3000801 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 13485909 - 13485959
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  13485909 aaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 13485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 15514830 - 15514880
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  15514830 aaaaaattaaagttgtattggaaatgtaaagtgacatttatttgaaaacaa 15514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 31290886 - 31291017
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | ||||  |||||| |||| ||| || ||||||||||| ||||||||||| |||| ||||||||| |||||||||| ||    
T  31290886 tactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaaggaatgaaatgaaataattattagacataacac-ttttactaaactg 31290984  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     || ||| ||||| |||||| || |||||||||||    
T  31290985 -cctttattttattagaaaaaga-aaacttaaagt 31291017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 31291056 - 31291118
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| ||||||| |||||||||||||| ||||||||||| ||||    
T  31291056 aaagttgaaagaaaaaaattaaagttgtattagaaatgtaaagtgatattcattttaagacaa 31291118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 43580692 - 43580619
Alignment:
Q  160 ctttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccc 234  Q
    ||||||| |||||||| || |||||||||| ||||||||||||||||| | |||||| ||||||||||| |||||    
T  43580692 ctttagccaattgcacacagattaaggaatagaatgaaataatcattacatataaca-tttttactaaactgccc 43580619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 4476274 - 4476363
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||||||||| ||||| | ||||  |||||| |||| |||  ||||||| ||||| |||||||||||||||| || ||||||||||    
T  4476274 tactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacactttt 4476363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 42740463 - 42740374
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||||||||| ||||| | ||||  |||||| |||| |||  ||||||| ||||| |||||||||||||||| || ||||||||||    
T  42740463 tactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacactttt 42740374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 42857151 - 42857212
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    |||||| |||| ||||||||||  |||||| |||||||||||||||||||| ||||||||||    
T  42857151 aaagttagaagaaaaaaattaatgttgtatgggaaatgtaaagtgacattccttttaaaaca 42857212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 392
Target Start/End: Complemental strand, 44645399 - 44645281
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacggat 374  Q
    ||||||||||| ||||||||||| ||| || |||||||||||| |||||||||||| ||| ||         ||||| ||||||| ||||||||||||||    
T  44645399 aaagttggaagaaaaaaattaaagttgcatgggaaatgtaaagcgacattcattttgaaataattttttttgctaaaacgacactcattttgaaacggat 44645300  T
Q  375 -gagtaatatttttaagca 392  Q
     ||||| |||||| |||||    
T  44645299 ggagtattattttgaagca 44645281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 45095950 - 45095905
Alignment:
Q  16 tctaataagaaaaatctaaaatataaatatgtggaaatttctaata 61  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  45095950 tctaataagaaaaatctaaaatatgcatatgtggaaatttctaata 45095905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 25722560 - 25722608
Alignment:
Q  282 gaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  25722560 gaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 25722608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 27027977 - 27027889
Alignment:
Q  130 tctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||| ||||||||||| | | ||||  |||| | |||||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  27027977 tctactccatccgtttcaaa-taagtgtcgttttaaccaattgcacacatattaagtaatggaatgaa--aatcattaaacataacactttt 27027889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 38457653 - 38457571
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa 264  Q
    |||||| ||| ||||||||||||||||| ||||||||| |||||||||| || || ||||||||| |||||| || |||||||||    
T  38457653 attaagaaattgaatgaaataatcattacacataacac-ttttactaaactg-ccattactttattagaaaaagataaacttaaa 38457571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 41850624 - 41850564
Alignment:
Q  130 tctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||||| ||||||||||||| | || | |||||||||||||||| ||||||||||||||    
T  41850624 tctactccatccgtttcaaaatgagtggcgctttagctaattgcacacatattaaggaatg 41850564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 35239543 - 35239470
Alignment:
Q  191 gaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||| ||||||||||||  ||||||| ||||||||||| || || |||||||||||||||| ||||||||||||||    
T  35239543 gaataaaataatcattaggcataaca-tttttactaaactgtcc-ttactttataagaaaaagacaaacttaaagt 35239470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 36771527 - 36771620
Alignment:
Q  171 tgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||| ||||||||| |||  ||||||||||| |||| |||||| | ||||||||||| ||| | ||| |||||||||||| ||||||||||||||    
T  36771527 tgcacacatattaagaaatataatgaaataattattagacataata-tttttactaaactgctc-ttattttataagaaaaagacaaacttaaagt 36771620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 43580537 - 43580474
Alignment:
Q  275 aaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  43580537 aaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttgaaacaa 43580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 43687990 - 43688033
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  43687990 aaaaaattaaagttgtattggaaatgtaaagtgacatttatttt 43688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 4391965 - 4391903
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||||||| ||||| |  ||||||||||||| ||||||||||||||||    
T  4391965 aaagttgggagaaaaaaattaaaattgtactaaaaatgtaaagtgatattcattttaaaacaa 4391903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 4392136 - 4392035
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | ||||  ||| || |||||||  || |||||| |||| ||||||||||| |||| ||||||||| |||||||||| ||    
T  4392136 tactccctccgtttcaaaatgagtgtcgttttggccaattgcatacaaattaagaaatgaaatgaaataattattagacataacac-ttttactaaactg 4392038  T
Q  232 ccc 234  Q
    |||    
T  4392037 ccc 4392035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 373
Target Start/End: Original strand, 20512588 - 20512687
Alignment:
Q  275 aaagttggaaggaaaaaatt-aaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacgga 373  Q
    ||||||||||| |||||||| ||| ||| |||| |||||||||| |||||||||||| ||||||       | ||||| ||||||| |||||||||||||    
T  20512588 aaagttggaagaaaaaaatttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaatttttttggctaaaacgacactcattttgaaacgga 20512687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 36310342 - 36310404
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || |||||| |||| |||||||||||||||||| ||||||| ||||| ||||||    
T  36310342 aaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacatttattttgaaacaa 36310404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 43736783 - 43736913
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | |||| ||||||| ||||||||  | ||| ||| ||| |||||||||||||||| | ||||||| |||||||||| |     
T  43736783 tactccatccgtttcaaaatgagtgtcgctttagccaattgcac-aaaatttagggatgaaatgaaataatcattagatataacac-ttttactaaact- 43736879  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     | |||| |||||||||||| || |||||||||||    
T  43736880 actcttattttataagaaaaaga-aaacttaaagt 43736913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 51381770 - 51381720
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  51381770 aaaaaattaaagttgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 54261476 - 54261414
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||| ||| |||||||| ||||||    
T  54261476 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcattttgaaacaa 54261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 54933115 - 54933247
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | |||| ||||||| ||||||||  ||||||||||||| ||| || || |||     ||||||| |||| ||||||||     
T  54933115 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaatttt-actaaaata 54933213  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     || |||||||||||||||| ||||||||||||||    
T  54933214 acc-ttactttataagaaaatgacaaacttaaagt 54933247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 5244785 - 5244736
Alignment:
Q  172 gcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||| ||||||||| ||| ||||||||||||||||| |||||||||||||    
T  5244785 gcacacatattaagaaattgaatgaaataatcattagacataacactttt 5244736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 35099458 - 35099507
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacatt 324  Q
    |||||||| || ||||||||||| |||||||||||||||||| |||||||    
T  35099458 aaagttgggagaaaaaaattaaagttgtattggaaatgtaaaatgacatt 35099507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 38457521 - 38457460
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||||| | ||||||||||| |||||||| ||||||||| ||| ||||||||| |||||    
T  38457521 aaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttgaaaca 38457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 27039531 - 27039452
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaa 251  Q
    |||||||| ||||||||| |||||||||||  |||||||||| ||||||| |||||||||| ||  ||||||||||||| ||||    
T  27039531 aattgcacacatattaagtaatggaatgaa--aatcattaaatataacac-ttttactaaagtg-tccttactttataaaaaaa 27039452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 35099316 - 35099376
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| |||||||| || |||||| || | |||||||||||||||| |||||||||||||    
T  35099316 tttagcaaattgcacacaaattaagaaacgaaatgaaataatcattagacataacactttt 35099376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 330
Target Start/End: Complemental strand, 42791397 - 42791334
Alignment:
Q  266 tgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||||||||||||||| ||||||||||| ||||| ||  ||| |||||||||||| |||||    
T  42791397 tgtgagagaaaagttggaagaaaaaaattaaagttgtactgataat-taaagtgacattgatttt 42791334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 43599495 - 43599561
Alignment:
Q  167 taattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccc 234  Q
    |||||||||  | ||||||||||| |||||||||||||||| |||||| || |||||||||| |||||    
T  43599495 taattgcacataaattaaggaatgaaatgaaataatcattagacataatac-ttttactaaactgccc 43599561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 43600283 - 43600337
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||| ||||| |||||    
T  43600283 aaagttggaag-aaaaaattaaaattgtattgaaaatgtaaagtaacatttatttt 43600337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 44854365 - 44854314
Alignment:
Q  286 gaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| ||||||    
T  44854365 gaaaaagttaaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 647684 - 647745
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| ||| | ||||||| ||||||    
T  647684 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgata-tcatttttaaacaa 647745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 5244635 - 5244585
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| || ||||  |||||||| |||||||||||||||||||||    
T  5244635 aaaaaattaaagttatattaaaaatgtaaggtgacattcattttaaaacaa 5244585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 15514646 - 15514736
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||| ||||||| ||||| | ||||  |||||  ||||||||  | | ||||||||| |||||||||||||||| |||||||| ||||    
T  15514646 ctactccatccgttttaaaatgaatgtcgttttagtcaattgcacataaaataaggaatgtaatgaaataatcattagacataacaatttt 15514736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 19552725 - 19552640
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||| |||||||||||||||  | |||||  ||||||||||| || || ||||||||||||||||  ||||| |||||||    
T  19552725 attaagaaatgaaatgaaataatcattggatataacgttttttactaaactgtcc-ttactttataagaaaaatacaaaattaaagt 19552640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 26965480 - 26965552
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||  | ||||| ||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  26965480 aatgaaataatcattggatataacgctttt-actaaactgccc-ttactttataagaaaaagacaaaattaaagt 26965552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 36461046 - 36460988
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||||||||||| ||||| | |||| |||||||||| || | |||||||||||||||    
T  36461046 tactccttccgttttaaaatgagtgtcgctttagctaaatgtaggcatattaaggaatg 36460988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 49470838 - 49470788
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| |||||||||  |||||||||||| ||||||    
T  49470838 aaaaaattaaagttgtattgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 50420319 - 50420258
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||  ||||||||| ||||||| ||||| ||||||    
T  50420319 aaagttggaag-aaaaaattaaagttgtattaaaaatgtaaaatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 42857010 - 42857098
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaa 228  Q
    ||||||| ||||| | ||||  |||||  |||| ||| || ||||||||||  |||||||||||||||| |||||||| |||||||||||    
T  42857010 tccgttttaaaatgagtgtcgttttaggcaattacacacagattaaggaatcaaatgaaataatcattagacataaca-tttttactaaa 42857098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 52222837 - 52222874
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatg 312  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  52222837 aaagttggaagaaaaaaattaaagttgtattggaaatg 52222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 9167649 - 9167711
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttat 244  Q
    ||||||||| | |||||||||||||||  |||||||| ||||||||||| || ||||||||||||    
T  9167649 attaaggaaggtaatgaaataatcatttcacataaca-tttttactaaactg-cccttactttat 9167711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 22414817 - 22414761
Alignment:
Q  275 aaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||| ||||| || ||||  |||||||||||||||||||||||    
T  22414817 aaagttggaagaaaaaaaattaaagttatattaaaaatgtaaagtgacattcatttt 22414761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 47138206 - 47138154
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaa 184  Q
    |||||| ||||||||||||| | |||||||||||  |||||||| ||||||||    
T  47138206 tactccatccgtttcaaaatgagtgtcactttagtcaattgcacacatattaa 47138154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 51398251 - 51398179
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatca 204  Q
    |||||| ||||||||||||| | |||| ||||||| |||||||| || |||||| |||| ||| || ||||||    
T  51398251 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataaagtaatca 51398179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 84430 - 84648
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| || |||||||||| | |||| ||||||  |||||||| || |||||||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  84430 tactccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacac-ttttactaaaatg 84528  T
Q  232 ccccttactttataagaaaaggacaaacttaaa---------------gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaa 316  Q
      |||||||||||||||||| ||||||||||||               ||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  84529 -tccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaaattggaagaaaaaaattaaagttgtattggaaatgtaaa 84627  T
Q  317 gtgacattcattttaaaacaa 337  Q
    |||||||||||||||||||||    
T  84628 gtgacattcattttaaaacaa 84648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 24040984 - 24041155
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa--------------- 264  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||| ||||||||||||                   
T  24040984 attaaggaatggaatgaaataatcattagacataacac-ttttactaaactg-cccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 24041081  T
Q  265 gtgtgagagaaaagttggaag-gaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  24041082 gtgtgagagaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 37437338 - 37437448
Alignment:
Q  155 tgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaagga 254  Q
    |||| |||||||  ||||||| |||||||||||||| ||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||| ||    
T  37437338 tgtcgctttagcccattgcacacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattg-cccttactttataagaaaaaga 37437436  T
Q  255 caaacttaaagt 266  Q
    ||||||||||||    
T  37437437 caaacttaaagt 37437448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 28751320 - 28751452
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| || |||||||||| | ||||  |||||| |||||||| || ||||||||||| ||| |||||||||||| |||||||| ||||||||||| ||    
T  28751320 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataaca-tttttactaaactg 28751418  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     ||||||||||||||||||||||||||||||||||    
T  28751419 -cccttactttataagaaaaggacaaacttaaagt 28751452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 5317537 - 5317622
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||    
T  5317537 attaaggaatgaaatgaaataatcattagacataacactttt-actaaattgccccttattttataagaaaaagacaaacttaaagt 5317622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 369
Target Start/End: Original strand, 38132257 - 38132354
Alignment:
Q  272 agaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaa 369  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||       | ||||||||||||| |||||||||    
T  38132257 agaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaatttttttggctaaagcgacactcattttgaaa 38132354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 45749411 - 45749541
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | |||| ||||| |||||||||| |||||||   |||||||| |||||||||||| ||||||||| ||||||||||  |    
T  45749411 tactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaataatcattagacataacac-ttttactaaaccg 45749509  T
Q  232 ccccttactttataagaaaaggacaaacttaaa 264  Q
     ||||||||||||||||||| ||||||||||||    
T  45749510 -cccttactttataagaaaaagacaaacttaaa 45749541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 48259775 - 48259907
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | ||||  |||||| |||||||| || |||||||||| ||||||||||||| ||| ||||||||| ||||| |||| ||    
T  48259775 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatagaatgaaataatcgttagacataacac-ttttattaaactg 48259873  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     ||||| ||||||||||||| || |||||||||||    
T  48259874 -cccttgctttataagaaaaagataaacttaaagt 48259907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 50349769 - 50349881
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | |||  ||||||| ||||| || || |||||||||||||||||||||||||||| ||||||||| |||||||||| ||    
T  50349769 tactccctccgtttcaaaatgagtgttgctttagccaattgaacacaaattaaggaatggaatgaaataatcattagacataacac-ttttactaaactg 50349867  T
Q  232 ccccttactttataa 246  Q
     ||||||||||||||    
T  50349868 -cccttactttataa 50349881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 1430508 - 1430666
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt---------------gtgagagaaa 276  Q
    ||||||||||| |||| | ||||||||||| |||||| ||| | |||||||||||||||| ||||||||||||||               ||| ||||||    
T  1430508 aatgaaataataattagatataacactttt-actaaactgcactttactttataagaaaaagacaaacttaaagttgcattggaaattgtgtgtgagaaa 1430606  T
Q  277 agttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  1430607 agttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaaca 1430666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 1429061 - 1428974
Alignment:
Q  178 atattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||| ||| |||||||||||| |||| | ||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  1429061 atattaagaaattgaatgaaataattattagatataacactttt-actaaactgccctttactttataagaaaaggacaaacttaaagt 1428974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 139 - 330
Target Start/End: Complemental strand, 43755260 - 43755058
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||| ||||| | |||| ||||||| |||||||| || ||||  ||||||||||||||||| |||||| | ||||||||| ||||||  |||| |||    
T  43755260 tccgttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaataataattaaaaa-aacactttt-actaaatcgccc-tta 43755164  T
Q  239 ctttataagaaaaggacaaacttaaagt---------------gtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacat 323  Q
    ||| ||||||||| ||||||||||||||               ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |    
T  43755163 cttaataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagagaaaagttggaag-aaaaaattaaagttgtattgaaaatgtaaagtgacgt 43755065  T
Q  324 tcatttt 330  Q
    |||||||    
T  43755064 tcatttt 43755058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 30006367 - 30006238
Alignment:
Q  135 tccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccc 234  Q
    ||||||||||||||||| | |||| ||||||  |||||||| || ||||| |||| ||||||||||||||||| ||||||||| | |||||||| || |     
T  30006367 tccttccgtttcaaaatgaatgtcgctttagtcaattgcacacagattaatgaattgaatgaaataatcattagacataacac-tattactaaattg-ct 30006270  T
Q  235 cttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||||| || ||| |||||||    
T  30006269 cttactttataagaaaaagataaatttaaagt 30006238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 48259946 - 48260008
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  48259946 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 15698836 - 15698905
Alignment:
Q  268 tgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||| ||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  15698836 tgagagtaaagttggaagaagaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 26582992 - 26582923
Alignment:
Q  268 tgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  26582992 tgagagaaaagttcgaagaaaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 43105551 - 43105644
Alignment:
Q  169 attgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa 264  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||| ||||  || ||| |||||||||||| ||||||||||||    
T  43105551 attgcacgcatattaagaaattgaatgaaataatcattagacataacac-ttttact-aaattaccattattttataagaaaaagacaaacttaaa 43105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 11650118 - 11650056
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  11650118 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 12002306 - 12002244
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| |||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  12002306 aaagctggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 26252178 - 26252116
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||    
T  26252178 aaagttggaagaaaaaaatttaagttgtattggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 48319924 - 48320045
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||||||||| | |||| ||||||| |||||||| ||||||||| |||||||||    |||||||| |||||| || |||||||||| || ||||||    
T  48319924 tccgtttcaaaatgagtgtcgctttagccaattgcacacatattaagaaatggaatg----aatcattagacataagac-ttttactaaattg-ccctta 48320017  T
Q  239 ctttataagaaaaggacaaacttaaagt 266  Q
    |||||||| | || ||||||||||||||    
T  48320018 ctttataaaagaaagacaaacttaaagt 48320045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 49894876 - 49894811
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||| | |||||||||||    
T  49894876 gtgtgagagaaaagttagaagaaaaaaattaaagttgtattggaaatgtaaaataacattcatttt 49894811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 6377205 - 6377299
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccc 234  Q
    ||||||| ||||| | |||| ||||||| ||||||||  | ||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||    
T  6377205 tccgttttaaaatgagtgtcgctttagccaattgcacataaattaaggaatgaaatgaaataatcattagacataacac-ttttactaaattgccc 6377299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 17919912 - 17919967
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  17919912 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgatattcatttt 17919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 44582872 - 44582927
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  44582872 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttt 44582927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 5317669 - 5317731
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| || |||||||||||||||||||| ||||||    
T  5317669 aaagttggaagaaaaaaattaaagttgtattgaaattgtaaagtgacattcattttgaaacaa 5317731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 12002450 - 12002354
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||| |||||||||||||| |||||||||||||| | |||||| || |||||||||| || |||||  |||||| ||||| ||||||||||||||    
T  12002450 aattgcacacatattaaggaatgaaatgaaataatcatcagacataatac-ttttactaaactg-cccttgttttatatgaaaaagacaaacttaaagt 12002354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 12851801 - 12851739
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  12851801 aaagttgggagaaaaaaattaaagttctattggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 17806471 - 17806529
Alignment:
Q  279 ttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||    
T  17806471 ttggaagtaaaaaattaaagttgtattggaaatgtaaagcgacactcattttaaaacaa 17806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 1428926 - 1428865
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||| ||| |||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  1428926 aaagttgcaagaaaaaaatttaagttgtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 40060856 - 40060935
Alignment:
Q  170 ttgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaa 251  Q
    |||||| ||||||||| |||| ||||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||    
T  40060856 ttgcacacatattaagaaatgaaatgaaataatgattagacataacac-ttttactaaattg-cccttactttataagaaaa 40060935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 43738339 - 43738408
Alignment:
Q  268 tgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||| ||||||| ||| |||||||| || |||||||| |||||| |||||||||||||||||||||||    
T  43738339 tgagagtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 9552436 - 9552484
Alignment:
Q  289 aaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  9552436 aaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 332
Target Start/End: Original strand, 10690912 - 10691080
Alignment:
Q  177 catattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt---------- 266  Q
    ||||||||| |||| |||||||||||||||| | |||||| ||||||||||| ||| | ||||||  |||||||| ||||||||||||||              
T  10690912 catattaagaaatgaaatgaaataatcattagatataaca-tttttactaaactgcac-ttacttcgtaagaaaaagacaaacttaaagttgcattgaaa 10691009  T
Q  267 -----gtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaa 332  Q
         |||||| |||||||| ||| ||||||||| | |||||||| ||||||||||||||||||| |||||    
T  10691010 attgtgtgagataaaagttgaaagaaaaaaattatagttgtattgaaaatgtaaagtgacattcagtttaa 10691080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 45377242 - 45377297
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||| || |||||| |||| ||||||||||||||||||||||||||||||||    
T  45377242 aaagttgggagaaaaaaagtaaagttgtattggaaatgtaaagtgacattcatttt 45377297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 2459068 - 2459006
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||| |||||||||||| ||||||    
T  2459068 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 2459006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 17919741 - 17919864
Alignment:
Q  140 ccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttac 239  Q
    |||||||||||| | |||| ||||||| |||| ||  || ||||| ||||| ||||||||||||||| |||||||||| |||||||||| || |||||      
T  17919741 ccgtttcaaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaataatcatt-aacataacac-ttttactaaactg-cccttgt 17919837  T
Q  240 tttataagaaaaggacaaacttaaagt 266  Q
    ||||||  |||| ||||||||||||||    
T  17919838 tttatattaaaaagacaaacttaaagt 17919864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 22664999 - 22664937
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||  ||||||  |||||||||||||||||||||||||||||||| ||||||    
T  22664999 aaagttggaagaaattaattaacgttgtattggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 43929745 - 43929683
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||| ||||||    
T  43929745 aaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaacaa 43929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 2245980 - 2245897
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaag 265  Q
    |||||| ||||||||||| |||||||||||||||| | ||||||||||| ||  | || ||||||||||||| |||||||||||||    
T  2245980 attaagaaatggaatgaagtaatcattaaacataata-tttttactaaactg-tcattcctttataagaaaaagacaaacttaaag 2245897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 6332394 - 6332275
Alignment:
Q  145 tcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttat 244  Q
    ||||||| | |||| ||||| | |||||||| || |||||| ||| ||||||||||||||||| ||||||||| |||||||||| || || ||  |||||    
T  6332394 tcaaaatgagtgtcgctttaaccaattgcacacaaattaagaaattgaatgaaataatcattagacataacac-ttttactaaactg-cctttgttttat 6332297  T
Q  245 aagaaaaggacaaacttaaagt 266  Q
    | ||||| ||||||| ||||||    
T  6332296 atgaaaaagacaaacataaagt 6332275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 9333174 - 9333105
Alignment:
Q  269 gagagaaaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| |||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||||||||||    
T  9333174 gagataaaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 9356947 - 9356878
Alignment:
Q  269 gagagaaaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| |||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||||||||||    
T  9356947 gagataaaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 28751500 - 28751549
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacatt 324  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  28751500 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacatt 28751549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 49426329 - 49426394
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaa 197  Q
    |||||| ||||||||||||| | |||| ||||||  |||||||| |||||||||||||||||||||    
T  49426329 tactccatccgtttcaaaatgagtgtcgctttaggcaattgcacacatattaaggaatggaatgaa 49426394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 42650342 - 42650402
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaac 335  Q
    |||| |||||| ||||||||||| ||||||| ||||||||||| |||||| ||||||||||    
T  42650342 aaagctggaagaaaaaaattaaagttgtattagaaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 48320077 - 48320144
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||| ||||||| ||| |||||||||||||||||||| |||| |||||| ||||| ||||||||||||    
T  48320077 gagagtaaagttgaaag-aaaaaattaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 50158398 - 50158454
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||    
T  50158398 aaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 50158454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 50349953 - 50350012
Alignment:
Q  280 tggaaggaaaaaattaaatttgtattggaaatgtaaagtgac--attcattttaaaacaa 337  Q
    |||||| ||||||||||| |||||||||||||||||||||||  ||||||||| ||||||    
T  50349953 tggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatattcattttgaaacaa 50350012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 255005 - 255068
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| ||||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  255005 aaagttggaagaaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 15647155 - 15647215
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||  |||||||||||| ||||||||||||||||||||||| ||||||    
T  15647155 aaagttgggagaaaaaaa--aaatttgtattgaaaatgtaaagtgacattcattttgaaacaa 15647215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 32806855 - 32806910
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||||||||| |||||| ||||||| | |||||| ||||||||||||||||||    
T  32806855 tccgtttcaaaatgattgtcgctttagccagttgcacacatattaaggaatggaat 32806910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 40061001 - 40061044
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  40061001 aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 40061044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 40719075 - 40719020
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||  ||||||||| |||||||||||||    
T  40719075 aaagttggaagaaaaaaattaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 44583825 - 44583770
Alignment:
Q  282 gaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| ||||||||||| |||||||  |||||||| |||||||||||||||||||||    
T  44583825 gaagaaaaaaattaaagttgtattaaaaatgtaaggtgacattcattttaaaacaa 44583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 6332214 - 6332164
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| ||  ||||||||||||||||||||||||||||||    
T  6332214 aaaaaattaaagttgtgttaaaaatgtaaagtgacattcattttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 43929876 - 43929792
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||| ||||||||||||||||| ||||||||||||| |||| | | ||  |||||||||||||||| ||| ||||||||||    
T  43929876 attaagaaattgaatgaaataatcattagacataacactttt-actatacttcca-ttactttataagaaaaagactaacttaaagt 43929792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 44024605 - 44024543
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||| | |||||||||| ||||||    
T  44024605 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcattttgaaacaa 44024543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 44108842 - 44108784
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||| ||||||||||||| | || ||||||||| |||||||| ||||||||||||||    
T  44108842 tactccatccgtttcaaaatgagtgacactttagccaattgcacacatattaaggaatg 44108784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 2245846 - 2245789
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaa 332  Q
    ||||||| ||| |||| |||||| |||||||| |||||||| ||||||||||||||||    
T  2245846 aaagttgaaagaaaaagattaaagttgtattgaaaatgtaaggtgacattcattttaa 2245789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 15698691 - 15698795
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaact 260  Q
    |||||| |||||||| || ||||||||||  ||| |||||||||||| ||||||||| ||| | |||| | ||   ||||||||||||||| || |||||    
T  15698691 tttagccaattgcacacaaattaaggaataaaattaaataatcattagacataacac-tttaaataaactaccatgtactttataagaaaaagataaact 15698789  T
Q  261 taaagt 266  Q
    ||||||    
T  15698790 taaagt 15698795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 50591383 - 50591444
Alignment:
Q  270 agagaaaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||||||||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||    
T  50591383 agagaaaagttggaagaaaaaaaattaaagttgtattggtaatgtaaaacgacattcatttt 50591444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 40719226 - 40719155
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcc 233  Q
    |||||| |||||||| ||  |||||||||| |||||||||||||||| |||| ||| ||||||||||| ||||    
T  40719226 tttagccaattgcacacaagttaaggaatgaaatgaaataatcattagacatcaca-tttttactaaactgcc 40719155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 5854143 - 5854198
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||||||||| | |||||||||||| |||||||| || |||||||||| ||||    
T  5854143 tccgtttcaaaatgagtgtcactttagccaattgcacacagattaaggaatagaat 5854198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 11134371 - 11134434
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||| ||| ||||||||| | ||||  |||||| |||||||| ||||||||||||||||||    
T  11134371 ctactccctccatttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatggaat 11134434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 5463816 - 5463758
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||| ||||||||||||| | |||| ||||||| ||||||||  |||||||||||||    
T  5463816 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatg 5463758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 5854318 - 5854380
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||| |||||| ||| | ||||||    
T  5854318 aaagttggaataaaaaaattaaagttgcattggaaatgtaaagcgacatttattctgaaacaa 5854380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 11134568 - 11134614
Alignment:
Q  290 aaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    |||||||| ||| |||| ||||||||||||||||||||||| |||||    
T  11134568 aaattaaagttgcattgaaaatgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 11650250 - 11650166
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||| ||||||||||| ||||| | |||  | ||||||||||| ||||| |||||||| ||||||| ||||||||||||||    
T  11650250 attaagaaattgaatgaaataaccattagatatagta-tttttactaaactgccc-ttactttaaaagaaaaagacaaacttaaagt 11650166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 12851972 - 12851871
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | |||| ||||||| |||| |||  | ||||||||||| ||| ||||||||||||   ||||||| ||||| |||||||    
T  12851972 tactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaaggaatgaaataaaataatcattaggtataacac-ttttaataaaatg 12851874  T
Q  232 ccc 234  Q
    |||    
T  12851873 ccc 12851871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 52403668 - 52403584
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||||||||||||||||||||  | ||||||| | ||| |||| || ||||||||||||||| ||| |||||| |||||||    
T  52403668 attaagaaatggaatgaaataatcattggatataacac-tgttattaaactg-cccttactttataaggaaaagacaaaattaaagt 52403584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 15647021 - 15647074
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||| || ||||||||||| || |||||| |||||| |||||||||||||    
T  15647021 aattgcacacaaattaaggaatgtaaagaaatattcattagacataacactttt 15647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 43105662 - 43105732
Alignment:
Q  267 gtgagagaaaagttggaaggaaaaaat---taaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||||||| ||  ||||||    |||| |||||||| |||||||| ||||||||||||||||||    
T  43105662 gtgagagaaaagttgaaaaaaaaaaaagaataaagttgtattgaaaatgtaaggtgacattcattttaaaa 43105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 44583963 - 44583883
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaa 263  Q
    |||||| |||| ||| |||||||||||| |||||||| ||||  ||||| ||||  ||| |||||||||||| |||||||||||    
T  44583963 attaagaaatgaaataaaataatcattagacataacaattttc-ctaaactgcc--ttattttataagaaaaagacaaacttaa 44583883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 45377071 - 45377166
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaa 228  Q
    |||||| ||||||||||||| ||||||  |||| | |||| ||| || |||||| |||| |||||||| ||||||| || || || |||||||||||    
T  45377071 tactccctccgtttcaaaatgattgtcgttttaaccaattacacacaaattaagaaatgaaatgaaatgatcattagacttatca-tttttactaaa 45377166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 49468621 - 49468689
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    |||||| ||| ||||||||| | |||| ||||||| |||||||| || ||||||||||| ||| |||||    
T  49468621 tactccctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataaaata 49468689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 139 - 371
Target Start/End: Complemental strand, 34225983 - 34225737
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||||||||| | |||| ||||||| ||||||||  | ||||||||||| |||||||||||||||| |||||| |  |||||||||| || ||||||    
T  34225983 tccgtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataata-attttactaaattg-ccctta 34225886  T
Q  239 ctttataagaaaaggacaaacttaaa---------------gtgtgagagaaaagttggaag-gaaaaaattaaatttgtattggaaatgtaaagtgaca 322  Q
    ||||||||||||| ||||||||||||               |||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||    
T  34225885 ctttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgaca 34225786  T
Q  323 ttcattttaaaacaannnnnnngactaaagcgacacttattttgaaacg 371  Q
    |||||||| ||||||       | ||||||||||||| |||||||||||    
T  34225785 ttcattttgaaacaatttttttggctaaagcgacactcattttgaaacg 34225737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 334
Target Start/End: Original strand, 14378167 - 14378375
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||| ||||| | |||| |||||||||||||||| ||  |||| |||| |||||||||||||||| || ||||||| |||||||||| || ||||||    
T  14378167 tccgttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacac-ttttactaaactg-ccctta 14378264  T
Q  239 ctttataagaaaaggacaaacttaaag---------------tgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacat 323  Q
    ||||||||||||| || ||| ||||||               || |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||    
T  14378265 ctttataagaaaaagataaatttaaagttgcattgaaaattatgcgagagaaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacat 14378364  T
Q  324 tcattttaaaa 334  Q
    |||||||||||    
T  14378365 tcattttaaaa 14378375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 40987194 - 40987326
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | |||| |||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||    
T  40987194 tactccctccgttttaaaatgagtgtcgctttagctcattgcacacatattaaggaatgaaatgaaataatcattagacataacac-ttttactaaattg 40987292  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
      |||||||||||||||||| || ||| |||||||    
T  40987293 -tccttactttataagaaaaagataaatttaaagt 40987326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 4766270 - 4766341
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||| |||||    
T  4766270 gtgtgagagaaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaaca 4766341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 36360310 - 36360419
Alignment:
Q  155 tgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaagga 254  Q
    |||| ||||||  ||||||||||| ||||| ||||| |||||||||||||||| ||||||||| |||||||||| || |||||| |||||||||||| ||    
T  36360310 tgtcgctttagtcaattgcacgcaaattaaagaatgaaatgaaataatcattagacataacac-ttttactaaactg-cccttattttataagaaaaaga 36360407  T
Q  255 caaacttaaagt 266  Q
     |||||||||||    
T  36360408 taaacttaaagt 36360419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 29795282 - 29795344
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  29795282 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29795344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 7743461 - 7743401
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaac 335  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  7743461 aaagttggaagaaaaagattaaagttgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 4840819 - 4840874
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  4840819 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 4840874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 24775430 - 24775297
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaat 230  Q
    ||||||| ||||||| || || | ||||  |||||  |||||||| || ||||||| || ||||||||||||||||| | ||||||| ||||||||||||    
T  24775430 ctactccatccgttttaagatgagtgtcgttttagtcaattgcacacaaattaaggtattgaatgaaataatcattagatataacac-ttttactaaaat 24775332  T
Q  231 gccccttactttataagaaaaggacaaacttaaagt 266  Q
    | | |||||||||||||||||  |||||||||||||    
T  24775331 g-ctcttactttataagaaaaaaacaaacttaaagt 24775297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 39866765 - 39866824
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  39866765 aaagttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcattttaaaa 39866824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 2459833 - 2459771
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  2459833 aaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 4536634 - 4536572
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  4536634 aaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 4536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 18374856 - 18374918
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  18374856 aaagttggaagaaaaaaattaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 29795147 - 29795243
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||| || |||||||||| || |||||| |||||||||||| |||||  |||||||    
T  29795147 aattgcacgcagattaatgaatggaatgaaataatcattagacataatac-ttttactaaactg-cccttattttataagaaaaagacaactttaaagt 29795243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 33093428 - 33093366
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  33093428 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 33093366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 14698078 - 14698010
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||| ||||||||||| ||| |||| |||||||||| |||||||||||| ||||||    
T  14698078 gagagaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 14698010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 45148035 - 45148106
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||| || |||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  45148035 gtgtgagagaaaaatttgaag-aaaaaattaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 7743634 - 7743509
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||||||||| | |||| ||||||| |||| ||| || ||||| ||||  |||||||||||||| | | ||||||| |||||||||  || ||||||    
T  7743634 tccgtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagatataacac-ttttactaagttg-ccctta 7743537  T
Q  239 ctttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||| |||||| |||||||    
T  7743536 ctttataagaaaaagacaaatttaaagt 7743509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 1381810 - 1381748
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||| ||| || ||||||||||||||||| ||||||||||||||||||    
T  1381810 aaagttggaagaaaaaaatcaaagttatattggaaatgtaaagtaacattcattttaaaacaa 1381748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 266
Target Start/End: Original strand, 4840679 - 4840771
Alignment:
Q  172 gcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||| ||||||||| ||||||||||||||||||||  | |||||  ||||||||||| || ||||||||||||||||||| |||||| |||||||    
T  4840679 gcacacatattaagaaatggaatgaaataatcattggatataac-gtttttactaaactg-cccttactttataagaaaaagacaaaattaaagt 4840771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 42970129 - 42970040
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||||||||| ||||| | ||||  |||||| ||||||||  ||||||||||||| ||||||||||| |||| || ||||||||||    
T  42970129 tactccttccgttttaaaataagtgtcgttttagccaattgcacatatattaaggaatgcaatgaaataattattagacgtaacactttt 42970040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 331
Target Start/End: Original strand, 40987363 - 40987419
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttta 331  Q
    ||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||    
T  40987363 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcatttta 40987419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 1360225 - 1360175
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  1360225 aaaaaattaaagttgtattggaaatgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 4133263 - 4133201
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||||    
T  4133263 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaat 4133201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 6592013 - 6591963
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6592013 aaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 10580950 - 10581012
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| |||| |||||||| ||||||||| ||||||    
T  10580950 aaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 24775237 - 24775187
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  24775237 aaaaaattaaaattgtattgaaaatgtaaagtgacaatcattttaaaacaa 24775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 43388749 - 43388811
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||| |||||||||||| ||||||    
T  43388749 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 43388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 30855347 - 30855278
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    ||||||| ||||||||||||| | |||| ||||| | |||||||||||||||||||||| |||| |||||    
T  30855347 ctactccctccgtttcaaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaaata 30855278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 775988 - 776077
Alignment:
Q  286 gaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacggatg 375  Q
    |||||||||||| ||| |||| |||||||||| |||||||||||| ||||||         ||||||||||||| |||||||||||||||    
T  775988 gaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaattttttttgctaaagcgacactcattttgaaacggatg 776077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 16316765 - 16316718
Alignment:
Q  279 ttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattca 326  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  16316765 ttggaagaaaaaaattaaagttgtattggaaatataaagtgacattca 16316718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 1298752 - 1298824
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||| || |||||  ||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  1298752 aatgaaataatcattgaatataacg-tttttactaaattgccc-ttactttataagaaaaagacaaaattaaagt 1298824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 1298885 - 1298927
Alignment:
Q  288 aaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  1298885 aaaaattaaagttgtattagaaatgtaaagtgacattcatttt 1298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 4536802 - 4536701
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||| |||||||||   ||||  |||||| ||||||||  | ||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||    
T  4536802 tactccctccatttcaaaatgtgtgtctgtttagccaattgcacataaattaaggaatgaaatgaaataatcattagacatatcac-ttttactaaactg 4536704  T
Q  232 ccc 234  Q
    |||    
T  4536703 ccc 4536701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 25383397 - 25383459
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||| ||||| | |||| ||||||| ||||||||||| |||||||||||||||    
T  25383397 tactccatccgttttaaaatgagtgtcgctttagccaattgcacgcaaattaaggaatggaat 25383459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 41984478 - 41984416
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| |||||||||| || ||| ||||| ||||||    
T  41984478 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 45372648 - 45372686
Alignment:
Q  299 ttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  45372648 ttgtattgaaaatgtaaagtgacattcattttaaaacaa 45372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 1381916 - 1381849
Alignment:
Q  195 gaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa 264  Q
    ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||| || |||||||||    
T  1381916 gaaataatcattagacataacac-ttttactaaactg-ctcttactttataagaaaaagaaaaacttaaa 1381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 6592148 - 6592107
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  6592148 attaaggaatgaaatgaaataatcattagacataacactttt 6592107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 36360465 - 36360520
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||| ||| ||||||||||| |||||||| ||||| ||||||| |||||||||    
T  36360465 aaagttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcatttt 36360520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 43344315 - 43344375
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||  |||||||||| |||||||| |||| ||| |||||||||||||| ||||||    
T  43344315 aaagttggaag--aaaaattaaagttgtattgaaaatataaggtgacattcattttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 441143 - 441205
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | ||||  |||||| |||||||| || |||||||||||||||    
T  441143 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatggaat 441205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 25332630 - 25332569
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| | ||| |||||||| ||||||    
T  25332630 aaagttggaag-aaaaaattaaagttgcattggaaatgtaaggcgacgttcattttgaaacaa 25332569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 25332812 - 25332750
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||| ||||| | |||| |||||||||||||||| || |||||||||| ||||    
T  25332812 tactccctccgttttaaaatgagtgtcgctttagctaattgcacacagattaaggaattgaat 25332750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 40410635 - 40410551
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||||||||| |||||||||  | ||||| ||||| | |||| ||||| |||||||||||||||| |||||| |||||||    
T  40410635 attaagaaatggaatgacataatcattggatataacgctttt-attaaactgccc-ttactttataagaaaaagacaaaattaaagt 40410551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 44228707 - 44228617
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaatt-gcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| ||||||| ||||| | |||| ||||||| |||| |||| |  |||||  ||||||||||||||||||||| | |||||||||||    
T  44228707 tactccctccgttttaaaatgaatgtcgctttagccaatttgcacacggattaaaaaatggaatgaaataatcattagatataacactttt 44228617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 14511520 - 14511459
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    |||||| | |||||||||||||  |||||||  |||||||||| |||||||||||| |||||    
T  14511520 aaagtttggaggaaaaaattaatgttgtattcaaaatgtaaagagacattcattttgaaaca 14511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 37107056 - 37106970
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataag--aaaaggacaaacttaaagt 266  Q
    |||||| |||||||||||||||| |||  ||| ||||| |||||||||| || |||||||||||||||  |||| || |||||||||||    
T  37107056 attaagaaatggaatgaaataattatttgacacaacac-ttttactaaattg-cccttactttataagcaaaaaagaaaaacttaaagt 37106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 1360379 - 1360319
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||| ||||||||| || |||||| |||||||| ||||||||||||  ||| ||||||||    
T  1360379 tttagttaattgcacacaaattaagtaatggaataaaataatcattagccatgacactttt 1360319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 14511642 - 14511602
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacacttt 220  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  14511642 attaaggaatgaaatgaaataatcattagacataacccttt 14511602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 42969952 - 42969900
Alignment:
Q  282 gaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||| ||||||||||| | |||||  ||||||||||||||||| |||||||||    
T  42969952 gaagaaaaaaattaaagtggtattaaaaatgtaaagtgacatttattttaaaa 42969900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 36660666 - 36660534
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| || |||||||||| | |||| |||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||| |||||||||||||    
T  36660666 tactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacac-ttttactaaaatg 36660568  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
      |||||||||||||||||| ||||||||||||||    
T  36660567 -tccttactttataagaaaaagacaaacttaaagt 36660534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 12167529 - 12167654
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||||||||| | |||| |||||||||||||||| || |||||| ||| ||||||||||||||||| ||| ||||| |||||||||| || ||||||    
T  12167529 tccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaagaaattgaatgaaataatcattagacaaaacac-ttttactaaactg-ccctta 12167626  T
Q  239 ctttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||| ||||||||||||    
T  12167627 ctttataagaaaaggtcaaacttaaagt 12167654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 14980131 - 14980193
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  14980131 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 14980193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 4011718 - 4011790
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  4011718 gtgtgagaaaaaagttggaagaaaaaaattaaagttgtatcggaaatgtaaagtgacgttcattttaaaacaa 4011790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 166560 - 166693
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaat 230  Q
    ||||||| ||||||||||||| | |||| | ||||| |||||||| || ||||||||||| |||||||||||||||| | ||||||| |||||||||| |    
T  166560 ctactccctccgtttcaaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaataatcattagaaataacac-ttttactaaact 166658  T
Q  231 gccccttactttataagaaaaggacaaacttaaagt 266  Q
    | |||||   ||||| ||||| ||||||||||||||    
T  166659 g-cccttgtattatatgaaaaagacaaacttaaagt 166693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 166741 - 166803
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  166741 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 42329638 - 42329700
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  42329638 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 4371591 - 4371502
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| ||||||||||||| | ||||  |||| |||||||||| || |||||||||||||||||||||||||||| ||||| |||||||    
T  4371591 tactccctccgtttcaaaatgagtgtcgttttaactaattgcacacaaattaaggaatggaatgaaataatcattagacatagcactttt 4371502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 43257801 - 43257904
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaact 260  Q
    |||||| |||||||| || ||||| ||||| |||||||||||||||| ||||||||| || ||||||| || ||||||||||||||||||  ||||||||    
T  43257801 tttagccaattgcacacagattaaagaatgaaatgaaataatcattagacataacac-ttatactaaactg-cccttactttataagaaatagacaaact 43257898  T
Q  261 taaagt 266  Q
    ||||||    
T  43257899 taaagt 43257904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 793700 - 793760
Alignment:
Q  277 agttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  793700 agttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 793760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 15400232 - 15400174
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaa 333  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||    
T  15400232 aaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcattttaaa 15400174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 33585067 - 33585129
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  33585067 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaa 33585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 36660488 - 36660426
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  36660488 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 38982237 - 38982299
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  38982237 aaagttgggagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 4751442 - 4751531
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||| ||| |||| ||||| | ||||  |||||| |||||||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  4751442 tactctttctgttttaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaatgaaataatcattagacataacactttt 4751531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 31889814 - 31889741
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||| ||||||    
T  31889814 gtgtgagagaaaagttggaaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 41845364 - 41845429
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||| |||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  41845364 gtgtgatagaaaagttgaaagaaaaaaattaaaattgtattgaaaatgtaaagtgacattcatttt 41845429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 29653606 - 29653661
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  29653606 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcatttt 29653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 36783589 - 36783464
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||||||||| | | || ||||||| |||||||| || ||||||  ||| |||||||||||||||| |||||||| ||||||||||| || ||||||    
T  36783589 tccgtttcaaaatgagtatcgctttagccaattgcacacagattaagagatgaaatgaaataatcattagacataaca-tttttactaaattg-ccctta 36783492  T
Q  239 ctttataagaaaaggacaaacttaaagt 266  Q
    |||  || ||||| |||||| |||||||    
T  36783491 cttgttatgaaaaagacaaatttaaagt 36783464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 43257943 - 43258002
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||    
T  43257943 aaagttgaaagaaaaaaattaaagttatattggaaatgtaaagtgacattcattttaaaa 43258002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 13066774 - 13066712
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  13066774 aaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 14979963 - 14980095
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | |||| ||||||    | |||| || |||||| ||||||||||||||||||||  | ||||||| |||||| ||| ||    
T  14979963 tactccctccgtttcaaaatgagtgtcgctttaggctttggcacacagattaagaaatggaatgaaataatcattggatataacac-ttttaccaaactg 14980061  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     ||||||||||||||||||| |||||| |||||||    
T  14980062 -cccttactttataagaaaaagacaaaattaaagt 14980095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 27810407 - 27810345
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  27810407 aaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 31557427 - 31557489
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  31557427 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 34171213 - 34171163
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  34171213 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 31557297 - 31557385
Alignment:
Q  177 catattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||| ||| ||||||||||||||||||| |||| || ||||| ||||   ||| |||||||||||||||| ||||||||||||||    
T  31557297 catattaagaaatagaatgaaataatcattaaatataatac-ttttagtaaacaaccctttactttataagaaaaagacaaacttaaagt 31557385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 34919965 - 34919847
Alignment:
Q  143 tttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttacttt 242  Q
    ||||||||| | | || ||||||| |||| ||| || ||||||||||| ||| |||||||||||  ||||| || |||| |||||| ||||| |||||||    
T  34919965 tttcaaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaatttt-actaaactgccc-ttacttt 34919868  T
Q  243 ataagaaaaggacaaacttaa 263  Q
    ||||||||| |||||||||||    
T  34919867 ataagaaaaagacaaacttaa 34919847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 29807225 - 29807288
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||| ||||||||||||| | |||| ||||||| ||| |||||||||||||||||||||||    
T  29807225 ctactccctccgtttcaaaataagtgtcgctttagccaatagcacgcatattaaggaatggaat 29807288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 42103974 - 42104037
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||| ||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||||    
T  42103974 ctactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaat 42104037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 4371412 - 4371362
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  4371412 aaaaaattaaagttgtattggaaatgtaaagtgacgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 7388273 - 7388335
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| ||||||  |||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  7388273 aaagatggaagataaaaattaaaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 32690816 - 32690878
Alignment:
Q  268 tgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||| |||||||  || ||||||||||| ||||||| ||||||||||||||||||||||||    
T  32690816 tgagagtaaagttgagagaaaaaaattaaagttgtatttgaaatgtaaagtgacattcatttt 32690878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 4742214 - 4742267
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||| |||||||||||||| |||||||||||||| | |||||||||||||    
T  4742214 aattgcacacatattaaggaatgaaatgaaataatcatcagacataacactttt 4742267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 7731697 - 7731775
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttatttt 365  Q
    ||||||||||| |||| ||| |||| |||||||||||||||||||||||||       |||||||| ||||||||||||    
T  7731697 aaaaaattaaagttgttttgaaaatataaagtgacattcattttaaaacaatttttttgactaaagtgacacttatttt 7731775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 33693971 - 33693882
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||||||||| ||||| | ||||  |||||| |||| |||  ||||||| ||||| |||||||||||||||| || ||||||||||    
T  33693971 tactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacactttt 33693882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 34919813 - 34919752
Alignment:
Q  276 aagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||| ||||||||||| || |||| | |||||||||||||||||||||| ||||||    
T  34919813 aagttggaagaaaaaaattaaagttatattaggaatgtaaagtgacattcattttgaaacaa 34919752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 12992265 - 12992205
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| |||||||  || ||||||||||| |||||||||||||||| |||||||||||||    
T  12992265 tttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacataacactttt 12992205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 4742358 - 4742421
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| ||||||| ||||||| ||||| |||||||||||||||||| ||||||    
T  4742358 aaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaacaa 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 4751622 - 4751685
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| ||||||| ||||||| ||||| |||||||||||||||||| ||||||    
T  4751622 aaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaacaa 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 12992123 - 12992063
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||  ||||||||||| ||||||| |||||||||| ||||||||||||| ||||||    
T  12992123 aaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatgacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 15400354 - 15400280
Alignment:
Q  191 gaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||| |||| | ||||||||||| |||||||| ||| |||||||||||||||| |  |||||||||||    
T  15400354 gaatgaaataattattagatataacactttt-actaaaattccctttactttataagaaaaaggaaaacttaaagt 15400280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 28640143 - 28640084
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||||||| || ||||||||||| ||| |||| ||||||||||||||||| |||||||||    
T  28640143 aaagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttattttaaaa 28640084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 375
Target Start/End: Original strand, 32963111 - 32963199
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacggatg 375  Q
    |||||| |||| |||||||||||||||||||||  ||||||||| ||||||       |||||||| |||||| ||||| |||||||||    
T  32963111 aaaaaaataaagttgtattggaaatgtaaagtggtattcattttgaaacaaactttttgactaaagtgacactcattttaaaacggatg 32963199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 33822595 - 33822650
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||| ||| | ||||||||| |||||||| |||||||||||||||||||||||    
T  33822595 aaagttgaaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 33822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 36296226 - 36296286
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||  ||||||||||| |||||||||||||| |||| || ||||||||||||||||    
T  36296226 aaagttggaa--aaaaaattaaagttgtattggaaatggaaagcgatattcattttaaaacaa 36296286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 36783416 - 36783361
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||| |||| ||||||||| | |||||||||||||||||||||||||| |||||    
T  36783416 aaagttagaagaaaaaaattagagttgtattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 4833725 - 4833787
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| ||||||||||  ||||||||||| ||||||    
T  4833725 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcaacattcattttgaaacaa 4833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 4967451 - 4967535
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||||||||||||||||||||  | ||||| | |||||||||| || |||||||||||||| |||| |||||| |||||||    
T  4967451 attaagaaatggaatgaaataatcattggatataacgc-ttttactaaactg-cccttactttataaaaaaaagacaaaattaaagt 4967535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 31889912 - 31889828
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||||||||||||||| ||| || |||||  |||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  31889912 attaagaaatggaatgaaataattattgaatataacg-ttttcactaaactgccc-ttactttataagaaaaagacaaaattaaagt 31889828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 38982073 - 38982155
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||||||||| | ||||  |||||| |||||||| || ||||||||||| |||||||||||| | | || ||||||||||    
T  38982073 tccgtttcaaaatgaatgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataatcttaagacgtaacactttt 38982155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17674396 - 17674329
Alignment:
Q  177 catattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataa 246  Q
    ||||||||  |||| ||||||||||||||||||||||||| |||||| |||| || ||||||||||||||    
T  17674396 catattaaaaaatgaaatgaaataatcattaaacataaca-tttttattaaactg-cccttactttataa 17674329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 21375561 - 21375630
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    |||||| |||||||||||||| | |||||||||||| ||||||||  | ||||| ||||||||| |||||    
T  21375561 ctactcattccgtttcaaaatgagtgtcactttagccaattgcacaaagattaaagaatggaataaaata 21375630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 13066916 - 13066856
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| |||||||  || ||||||||||| |||||||||||||||| ||| |||||||||    
T  13066916 tttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacacaacactttt 13066856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 24436449 - 24436541
Alignment:
Q  129 ttctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||| |||| ||||||| ||||| | ||||  |||||| ||||||||  | ||||||||||  |||||||||||||||| | |||||||||||    
T  24436449 ttctgctccctccgttttaaaatgagtgtcgttttagccaattgcacatagattaaggaataaaatgaaataatcattagatataacactttt 24436541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 27658682 - 27658726
Alignment:
Q  293 ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||    
T  27658682 ttaaagttatattggaaatgtaaagtgacattcattttgaaacaa 27658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 42661852 - 42661920
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    |||||| | ||||||||||| | |||| ||||||| |||||||| |||||||||||||| ||| |||||    
T  42661852 tactccattcgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaaata 42661920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 1513172 - 1513088
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||| ||||||||||||||||||||||| |||||||  | |||   ||||||||||| |||| ||  |||||||||||||    
T  1513172 attaagaaatgaaatgaaataatcattaaacataatacttttt--tcaaactacccttactttacaagagaaaaacaaacttaaagt 1513088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 12167693 - 12167736
Alignment:
Q  294 taaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 16886146 - 16886091
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||| ||||| |||| ||| ||||||||    
T  16886146 aaagttggaagaaaaaaattaaagttgtattgaaaatgcaaagcgacgttcatttt 16886091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 21375480 - 21375543
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||| ||||||||||||| | || ||||||||| |||||||| || ||||| |||||||||    
T  21375480 ctactccctccgtttcaaaataagtgccactttagccaattgcacacagattaatgaatggaat 21375543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 29051620 - 29051663
Alignment:
Q  291 aattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||| ||||||| |||| |||||||||||||||||||||||    
T  29051620 aattaaagttgtattagaaaggtaaagtgacattcattttaaaa 29051663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 39059856 - 39059805
Alignment:
Q  286 gaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||| |||||||| ||||||||||  ||||||||||| ||||||    
T  39059856 gaaaaaattaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 2729698 - 2729756
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||| ||||||||||||| |||||| ||||||| |||||||  || |||||||||||    
T  2729698 tactccatccgtttcaaaatgattgtcgctttagccaattgcatacagattaaggaatg 2729756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 17674257 - 17674207
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| || ||||| ||| ||||||||||||||||||| ||||||    
T  17674257 aaaaaattaaagttttattgaaaacgtaaagtgacattcattttgaaacaa 17674207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 26660995 - 26660937
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||| ||||||| ||||| | |||| ||||||| |||||||| ||||||||||||||    
T  26660995 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatg 26660937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 26932588 - 26932530
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||| ||||||| ||||| | |||| ||||||| |||||||| ||||||||||||||    
T  26932588 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatg 26932530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 33741526 - 33741464
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||| |||| ||||||| ||| ||| |||| |||||||||||||||||||| || ||||||    
T  33741526 aaagtttgaagaaaaaaatgaaagttgcattgaaaatgtaaagtgacattcatattgaaacaa 33741464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 8960993 - 8961078
Alignment:
Q  178 atattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||  ||| |||||||||||| ||||||||| |||||||||| ||   |||| |||||||||||| || ||| |||||||    
T  8960993 atattaaggaatataataaaataatcattagacataacac-ttttactaaactg--tcttattttataagaaaaagataaatttaaagt 8961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 375
Target Start/End: Original strand, 3025097 - 3025125
Alignment:
Q  347 ctaaagcgacacttattttgaaacggatg 375  Q
    |||||||||||||||||||||||||||||    
T  3025097 ctaaagcgacacttattttgaaacggatg 3025125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 39059988 - 39059914
Alignment:
Q  190 ggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||||| ||||||||| |||||||||| |  |||||  |||||| |||||  |||||||||||||    
T  39059988 ggaatgaaataatcattagacataacac-ttttactaaact-acccttgttttatatgaaaaaaacaaacttaaagt 39059914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 11994 - 12125
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | |||| ||||||| ||||||||  | |||||||||||||||||||||||||||| ||||||||| |||||||||| ||    
T  11994 tactccctccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaataatcattagacataacac-ttttactaaactg 12092  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
      |||||||||||||||||| ||||||||||||||    
T  12093 --ccttactttataagaaaaagacaaacttaaagt 12125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 12164 - 12219
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||    
T  12164 aaagttggaagaaaaaaattaaagttatattggaaatgtaaaatgacattcatttt 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 38328967 - 38329184
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | | || ||||||  |||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||| ||    
T  38328967 tactccctccgtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaataatcattagacataacac-ttttactaaactg 38329065  T
Q  232 ccccttactttataagaaaaggacaaacttaaa---------------gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaa 316  Q
      |||||||||||||  ||| ||||||||||||               ||||||| | ||||||| ||| ||||||||||| |||||||| |||| ||||    
T  38329066 --ccttactttataatcaaaagacaaacttaaagttgcattgaaaattgtgtgagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatataaa 38329163  T
Q  317 gtgacattcattttaaaacaa 337  Q
    |||||||||||||||||||||    
T  38329164 gtgacattcattttaaaacaa 38329184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 27109732 - 27109865
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | ||||  ||||| |  | |||| ||||||||| ||| ||||||||||||||||| | ||||||||||| |||||| ||    
T  27109732 tactccatccgtttcaaaatgagtgtcgttttaggtgttggcacacatattaagaaatagaatgaaataatcattagatataacactttt-actaaattg 27109830  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     |  |||||||||||||||||||||||||||||||    
T  27109831 tcttttactttataagaaaaggacaaacttaaagt 27109865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 9022455 - 9022393
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9022455 aaagttggaagaaaaaaattaaagttgtattggaaacgtaaagtgacattcattttaaaacaa 9022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 36915427 - 36915332
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaac 370  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||       ||||||||||||||| ||||| ||||    
T  36915427 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaatttttttgactaaagcgacactcattttaaaac 36915332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 7129371 - 7129306
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||    
T  7129371 gtgtgagagaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcatttt 7129306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 18666603 - 18666668
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||||||||||    
T  18666603 gtgtgagagaaaagttggaagaaaaaaactaaagttgcattggaaatgtaaagtgacattcatttt 18666668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 8471347 - 8471279
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  8471347 gagagaaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttgaaacaa 8471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 36915606 - 36915473
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaat 230  Q
    ||||||| ||||||| ||||| | ||||  |||| | |||||||  || |||||||||||||||||||||||||||| |||||| | ||||||||||| |    
T  36915606 ctactccctccgttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaataatcattagacataata-tttttactaaatt 36915508  T
Q  231 gccccttactttataagaaaaggacaaacttaaagt 266  Q
    | |||||  |||||| ||||| ||||||||||||||    
T  36915507 g-cccttgttttatatgaaaaagacaaacttaaagt 36915473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 1774152 - 1774214
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  1774152 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttaaaacaa 1774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 5588566 - 5588628
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  5588566 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 14541838 - 14541900
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  14541838 aaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 27109913 - 27109975
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  27109913 aaagttggaagaaaaaaattaaagttgtattggaaatggaaagtgacattcattttgaaacaa 27109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 32061516 - 32061578
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||||||||    
T  32061516 aaagttggaagaaaataattaaatttgtatagaaaatgtaaagtgacattcattttaaaacaa 32061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 32326630 - 32326769
Alignment:
Q  125 aaatttctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttac 224  Q
    |||||| |||| | ||||||| ||||| | |||| ||||||  |||||||| || ||||||||||| |||||||||||||||| || |||||| ||||||    
T  32326630 aaatttttactacatccgttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacgtaacac-ttttac 32326728  T
Q  225 taaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||| || |||||  |||||| ||||| |||||| |||||||    
T  32326729 taaactg-cccttgttttatatgaaaaagacaaatttaaagt 32326769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 3095596 - 3095656
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaac 335  Q
    |||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  3095596 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 22601365 - 22601243
Alignment:
Q  142 gtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactt 241  Q
    |||||||||| | ||||  |||||| ||||| || |||||||| ||||  |||||||||||||||| ||||||| | |||||||||| ||  | ||||||    
T  22601365 gtttcaaaatgaatgtcgatttagccaattgtacacatattaatgaataaaatgaaataatcattagacataactc-ttttactaaattg-tctttactt 22601268  T
Q  242 tataagaaaaggacaaacttaaagt 266  Q
    |||||||||| ||||||||||||||    
T  22601267 tataagaaaaagacaaacttaaagt 22601243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 29931318 - 29931386
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||| |||||| |||| ||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  29931318 gagagtaaagttagaagaaaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaacaa 29931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 45187231 - 45187340
Alignment:
Q  155 tgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaagga 254  Q
    |||| ||||||| |||||||| || ||||||||||  |||||||||||||||| |||| |||| |||||||||| ||  ||||  |||||||||||| ||    
T  45187231 tgtcgctttagccaattgcacacagattaaggaatataatgaaataatcattagacatgacac-ttttactaaactg-tccttgttttataagaaaaaga 45187328  T
Q  255 caaacttaaagt 266  Q
    ||||||||||||    
T  45187329 caaacttaaagt 45187340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 2803174 - 2803256
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||||||||| | |||| ||||| |||||||||| || |||  |||||| |||||||||||||||| |||||||||||||    
T  2803174 tccgtttcaaaataagtgtcgctttaactaattgcacacaaattttggaatgaaatgaaataatcattatacataacactttt 2803256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 22601195 - 22601134
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  22601195 aaagttggaag-aaacaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 22601134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 35052531 - 35052469
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  35052531 aaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaacgacattcattttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 41790199 - 41790265
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||||||||||    
T  41790199 gtgtgagagaaaagttgaaagaaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 41790265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 6839392 - 6839317
Alignment:
Q  187 aatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa 264  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || || |||||||||||||||| ||||||| ||||    
T  6839392 aatggaatgaaataatcattagacataacac-ttttactaaattg-cctttactttataagaaaaagacaaacataaa 6839317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 34461676 - 34461737
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaac 335  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  34461676 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 41415072 - 41414983
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| ||||||| ||||| | ||||  |||||| ||||||||  ||||||||||||| |||||||||||||||| || ||||||||||    
T  41415072 tactccatccgttttaaaataaatgtcgttttagccaattgcacatatattaaggaatgaaatgaaataatcattagacgtaacactttt 41414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 9022636 - 9022506
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | ||||  |||||| |||||||| || |||||  ||||||||||| ||||||||| ||||||||| |||||||||| ||    
T  9022636 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaatgaattaatcattagacataacac-ttttactaaactg 9022538  T
Q  232 ccccttactttataagaaaaggacaaacttaaa 264  Q
     | |||  |||||| ||||| ||||||||||||    
T  9022537 -cacttgttttatatgaaaaagacaaacttaaa 9022506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 5588440 - 5588511
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||||||||||||| ||||||||||| ||  ||| | |||||||||||| ||||||||||||||    
T  5588440 aatgaaataatcattaaacataaca-tttttactaaactg--cctcaatttataagaaaaagacaaacttaaagt 5588511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 8382582 - 8382629
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  8382582 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 8382629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 11257600 - 11257540
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||  |||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  11257600 aaagttggaag--aaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 34168298 - 34168353
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||    
T  34168298 aaagttggaagaaaaaagttaaagttgtattgaaaatgtaaagtgacattcatttt 34168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 156301 - 156239
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||||||| || |||||| |||||||||||||||||||||| ||||||    
T  156301 aaagttgggagaaaaaaattaaagttatattgggaatgtaaagtgacattcattttgaaacaa 156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 7612558 - 7612496
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||  |||| ||||  |||||||| ||||||||||||||||||||||||||||||    
T  7612558 aaagttggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 39463498 - 39463436
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||||    
T  39463498 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaat 39463436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 30788995 - 30788934
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    |||||| |||| ||||||||||| |||||||| | ||||||||||||||| |||||||||||    
T  30788995 aaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 11336091 - 11336162
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||| ||  ||||||||| | |||||||| ||||||||| ||| ||||||||||||||||    
T  11336091 gtgtgagagaaaagttgaaaa-aaaaaattacagttgtattgaaaatgtaaaatgatattcattttaaaacaa 11336162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 387
Target Start/End: Original strand, 18673192 - 18673305
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacggat 374  Q
    ||||||||||| ||||||||||| | | |||| |||||||||| ||||||||||||||||  |       | ||||| ||||||| ||||||||||||||    
T  18673192 aaagttggaagaaaaaaattaaagtcgcattgaaaatgtaaagcgacattcattttaaaattatttttttggctaaaacgacactcattttgaaacggat 18673291  T
Q  375 -gagtaatattttt 387  Q
     ||||| |||||||    
T  18673292 ggagtattattttt 18673305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 2803341 - 2803392
Alignment:
Q  286 gaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  2803341 gaaaaaattaaaattgtattgaaaatgtaaagtgacatttattttgaaacaa 2803392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 2812876 - 2812817
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatt 328  Q
    |||||||||||| | || ||||||||||| |||||||||||||||||||  |||||||||    
T  2812876 gagagaaaagttaggagaaaaaaattaaagttgtattggaaatgtaaagcaacattcatt 2812817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 16208998 - 16208955
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  16208998 aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 16208955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 33870814 - 33870759
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  33870814 aaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccatttt 33870759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 8382399 - 8382500
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | ||||  |||||||||||||||  | ||||| ||||| ||| |||||||| ||| ||||||||| |||||||||| ||    
T  8382399 tactccatccgttttaaaatgagtgtcgttttagctaattgcacataaattaaagaatgaaataaaataatcgttagacataacac-ttttactaaactg 8382497  T
Q  232 ccc 234  Q
    |||    
T  8382498 ccc 8382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 27416548 - 27416506
Alignment:
Q  288 aaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||| |||| ||||||||||||||||||||||||||||||||    
T  27416548 aaaaactaaagttgtattggaaatgtaaagtgacattcatttt 27416506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 30789115 - 30789043
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||| ||||||||| ||||| |||| ||  |||||||||||||||||| |||||| |||||||    
T  30789115 aatgaaataatcattagacataacac-ttttattaaattg-tccttactttataagaaaaagacaaatttaaagt 30789043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 42946170 - 42946120
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||  ||||||||| ||||||||||||||||||||    
T  42946170 aaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 2812987 - 2812915
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccc 234  Q
    |||||| |||||||  || |||||| ||| ||||||||||||||||| ||||||||| |||||||||| |||||    
T  2812987 tttagccaattgcatacaaattaagtaattgaatgaaataatcattagacataacac-ttttactaaactgccc 2812915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 8107264 - 8107304
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcat 327  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  8107264 aaaaaattaaagttgtattgaaaatgtaaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 26439035 - 26438976
Alignment:
Q  275 aaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| |||||| ||||| |||||| |||||||||||||| ||||||||||||||    
T  26439035 aaagttggaagaaaaaaaattaaagttgtat-ggaaatgtaaagtggcattcattttaaaa 26438976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 7612689 - 7612606
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||| ||||||||||||||||  | ||||| ||||  |||||| ||||| |||||||||||||||| |||||| |||||||    
T  7612689 attaagaaatagaatgaaataatcattggatataacgcttt--actaaactgccc-ttactttataagaaaaagacaaaattaaagt 7612606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 32326830 - 32326873
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||    
T  32326830 aaaaaattaaagttgtattgaaaatgtaaagtgacatttatttt 32326873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 32661365 - 32661310
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||| || ||||||||||| |||||||| ||||||| ||| |||||||||||    
T  32661365 aaagttgggagaaaaaaattaaagttgtattgaaaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 39970374 - 39970323
Alignment:
Q  286 gaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| |||  |||||||||||||||||||| ||||||||||| ||||||    
T  39970374 gaaaaaactaatgttgtattggaaatgtaaagtaacattcattttgaaacaa 39970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 37185622 - 37185671
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaat 230  Q
    ||||||| || ||||||||||||||||| ||||||||| ||||||||||||    
T  37185622 attaaggtatagaatgaaataatcattagacataacac-ttttactaaaat 37185671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 45187389 - 45187439
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||| ||||||    
T  45187389 aaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaa 45187439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 156412 - 156371
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||| || |||||||||||||||| |||||||||||||    
T  156412 attaaggattgaaatgaaataatcattagacataacactttt 156371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 8106836 - 8106889
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||| || ||||| ||||| |||||||||||||||| ||||| |||||||    
T  8106836 aattgcacacaaattaaagaatgaaatgaaataatcattagacatagcactttt 8106889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 13109045 - 13108993
Alignment:
Q  277 agttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||| ||||||||||| ||| |||| ||||||||| |||||||||||||    
T  13109045 agttggaag-aaaaaattaaagttgcattgaaaatgtaaaatgacattcatttt 13108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 17921191 - 17921130
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    ||||||||||||||| |||  ||| ||| |||||||| ||||||||||||| |||| |||||    
T  17921191 tccgtttcaaaattaatgttgcttaagccaattgcacacatattaaggaattgaataaaata 17921130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 32661526 - 32661449
Alignment:
Q  142 gtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactt 219  Q
    |||||||||| | ||| | |||||  |||||||| || ||||||||||| ||| |||||||||||| ||||| |||||    
T  32661526 gtttcaaaatgaatgtgattttagtcaattgcacacaaattaaggaatgaaataaaataatcattagacatatcactt 32661449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 39970527 - 39970455
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccc 234  Q
    |||||| ||||||||  | ||||| ||||| |||||||||||||||| ||||| ||| |||||||||| |||||    
T  39970527 tttagccaattgcacataaattaaagaatgaaatgaaataatcattagacataccac-ttttactaaactgccc 39970455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 8471399 - 8471367
Alignment:
Q  234 ccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||||| ||||||||||||||    
T  8471399 ccttactttataagaaaaagacaaacttaaagt 8471367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 32737957 - 32737875
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa 264  Q
    |||||| ||| |||||||||| |||||| | |||||||||||   |||| ||||| |||||||||||||||| || |||||||||    
T  32737957 attaagaaattgaatgaaata-tcattagatataacacttttgt-taaactgccctttactttataagaaaaagaaaaacttaaa 32737875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 34461494 - 34461562
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    |||||||| ||||||||||| | |||| ||||||| ||||| || || ||||||||||| ||| |||||    
T  34461494 tactccttacgtttcaaaatgagtgtcgctttagccaattgtacacagattaaggaatgaaataaaata 34461562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 43938168 - 43938124
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcatttta 331  Q
    ||||||||||| || |||| ||||||||||||| |||||||||||    
T  43938168 aaaaaattaaagttctattcgaaatgtaaagtggcattcatttta 43938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 139 - 337
Target Start/End: Original strand, 32140908 - 32141119
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||||||||| | ||| | |||| | ||||| || || |||||| ||| ||||||||||||||||| ||||||||||||| |||||| ||||||| |    
T  32140908 tccgtttcaaaatgagtgttaatttaaccaattgtacacagattaagaaattgaatgaaataatcattagacataacactttt-actaaactgcccct-a 32141005  T
Q  239 ctttataagaaaaggacaaacttaaa---------------gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacat 323  Q
    ||||||||  ||| ||||||| ||||               ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||    
T  32141006 ctttataaacaaaagacaaacataaatttgcattgaaaattgtgtgagagaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtggcat 32141105  T
Q  324 tcattttaaaacaa 337  Q
    ||||||| ||||||    
T  32141106 tcattttgaaacaa 32141119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 51930667 - 51930595
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||    
T  51930667 gtgtgagagaaaagttggaagaaaaaaattaaaattgtattggaaatgtaaagcgacattcattttgaaacaa 51930595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 56556337 - 56556410
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  56556337 gtgtgagagaaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 132 - 232
Target Start/End: Complemental strand, 29840292 - 29840193
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | ||||  |||| | |||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29840292 tactccctccgtttcaaaatgagtgtcgttttacccaattgcacacaaattaaggaatggaatgaaataatcattagacataacac-ttttactaaaatg 29840194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 50072348 - 50072276
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  50072348 gtgtgagaaaaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 50072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 22212398 - 22212302
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacg 371  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||       | ||||||||||| |||||||||||||    
T  22212398 aaagttggaagaaaaaaattaaagttatattggaaatgtaaggtgacattcattttaaaacaatttttttggctaaagcgacatttattttgaaacg 22212302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 34360219 - 34360110
Alignment:
Q  155 tgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaagga 254  Q
    |||| ||||||  |||||||  || ||||||||||| |||||||||||||||| | ||||||| |||||||||| || ||||||||||||||||||| ||    
T  34360219 tgtcgctttagtcaattgcatccagattaaggaatgaaatgaaataatcattagatataacac-ttttactaaactg-cccttactttataagaaaaaga 34360122  T
Q  255 caaacttaaagt 266  Q
    ||||||||||||    
T  34360121 caaacttaaagt 34360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 30492958 - 30492868
Alignment:
Q  131 ctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||| ||||||||||||| | |||   |||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  30492958 ctactccctccgtttcaaaatgagtgtggttttagccaattgcacacaaattaaggaatggaatgaaataatcattagacataacactttt 30492868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 31941615 - 31941553
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  31941615 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 36805366 - 36805497
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    ||||||||| |||| ||||| | ||||  |||| |||||||||| || ||||||||||| |||||||||||||||| ||||||||| |||||||||| ||    
T  36805366 tactccttctgttttaaaatgagtgtcgtttta-ctaattgcacacagattaaggaatgaaatgaaataatcattagacataacac-ttttactaaactg 36805463  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
      ||||| |||||| ||||| ||||||||||||||    
T  36805464 -tccttagtttatatgaaaaagacaaacttaaagt 36805497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 21045224 - 21045151
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  21045224 gtgtgagagaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 21045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 15501234 - 15501302
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  15501234 gagagtaatgttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 31987361 - 31987302
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  31987361 aaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttaaaa 31987302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 52732657 - 52732594
Alignment:
Q  275 aaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  52732657 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 52732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 6462066 - 6462004
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||    
T  6462066 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 19849141 - 19849079
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  19849141 aaagttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 24259668 - 24259606
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  24259668 aaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 34096217 - 34096121
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||| || |||||  |||| |||||||||||||||| || |||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||    
T  34096217 aattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacactttt-actaaattgccc-ttactttataagaaaaagacaaacttaaagt 34096121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 42672626 - 42672494
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| | ||||||||||| | ||||| |||||  |||||||| || ||||||||||  |||||||||||||||| ||||||||| |||||||||| |     
T  42672626 tactccatgcgtttcaaaatgagtgtcaatttagtcaattgcacacaaattaaggaatataatgaaataatcattagacataacac-ttttactaaact- 42672529  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     | | ||||||||||||||| |||||| |||||||    
T  42672528 actcatactttataagaaaaagacaaatttaaagt 42672494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 22212578 - 22212489
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| ||||||| |||||   |||| ||||||| ||||| || |||||||||||||| |||||||||||||||| |||||||||||||    
T  22212578 tactccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaaggaatgaaatgaaataatcattagacataacactttt 22212489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 31817261 - 31817331
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||| ||||||  ||| ||| |||||||||||||||||||||||||||| ||||||    
T  31817261 gtgtgagagaaaagttggaagaaaaaaa--aaagttgcattggaaatgtaaagtgacattcattttgaaacaa 31817331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 37445844 - 37445765
Alignment:
Q  185 ggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||| |||||| |||||||    
T  37445844 ggaatgaaatgaaataatcattagacataacac-ttttactaaactg-cccttactttataagaaaaagacaaatttaaagt 37445765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 386
Target Start/End: Original strand, 36805538 - 36805651
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnnga-ctaaagcgacacttattttgaaacgga 373  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| | |||| |||||||||||||        | ||||||||||||| |||||||||||||    
T  36805538 aaagttggaagaaaaaaattaaagttgtattgcaaatgtaaaataacatacattttaaaacaatattttttagctaaagcgacactcattttgaaacgga 36805637  T
Q  374 tg-agtaatatttt 386  Q
    || |||||||||||    
T  36805638 tgaagtaatatttt 36805651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 38692477 - 38692409
Alignment:
Q  269 gagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||||| || ||||||||||| ||  |||| ||||||||||||||||||||||||||||||    
T  38692477 gagagaaaagttgggagaaaaaaattaaagtttaattgaaaatgtaaagtgacattcattttaaaacaa 38692409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 39671167 - 39671238
Alignment:
Q  265 gtgtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||  |||||||||||| ||||||    
T  39671167 gtgtgagagaaaagttgaaag-aaaaaattaaagttgtattggaaatgtaaaacgacattcattttgaaacaa 39671238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 19282504 - 19282567
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  19282504 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 28116302 - 28116247
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  28116302 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttt 28116247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 45520553 - 45520611
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  45520553 aaagttggaag-aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 45520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 47321202 - 47321139
Alignment:
Q  275 aaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  47321202 aaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 47321139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 15501129 - 15501201
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||  |||||||||||||    
T  15501129 aatgaaataatcattagacataaca-tttttactaaactgccc-ttactttataagaaaaatacaaacttaaagt 15501201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 17499812 - 17499874
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  17499812 aaagttggaagaaaaaaattaaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 29840120 - 29840070
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  29840120 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29840070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 30022125 - 30022063
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||| ||||||    
T  30022125 aaagttggaagaaaaaaattaaagttgtattggaaatgtcaagtaacattcattttgaaacaa 30022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 32140798 - 32140880
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||||||||| | ||||  |||||  |||||||| || ||||||||||| ||| ||||||||||||||||||||||||||    
T  32140798 tccgtttcaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgaaatcaaataatcattaaacataacactttt 32140880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 34124352 - 34124290
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||| |||||||||||||||||||    
T  34124352 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttaaaacaa 34124290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 37445717 - 37445655
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||  ||||||||| ||||||||||||||||||||    
T  37445717 aaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 43421210 - 43421272
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||| |||||||| ||||||    
T  43421210 aaagttggaagaaaaaaattaaagttgtatgggaaatgtaaagtgaccttcattttgaaacaa 43421272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 51434352 - 51434414
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  51434352 aaagtttgaaggaaaaaattaaagttgcattagaaatgtaaagcgacattcattttaaaacaa 51434414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 41920223 - 41920287
Alignment:
Q  130 tctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||||| ||||||||||||| | ||||| ||||||||||||||| |||||||| |||||||||    
T  41920223 tctactccctccgtttcaaaataagtgtcattttagctaattgcacacatattaaagaatggaat 41920287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 35928548 - 35928486
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||| ||| ||||| ||||||    
T  35928548 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 45520421 - 45520505
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||||||| |||||||||||| ||||||||| |||||||||  || ||||||| ||||||||| | ||||||||||||||    
T  45520421 attaagaaatggaataaaataatcattagacataacac-ttttactaagctg-cccttacattataagaataagacaaacttaaagt 45520505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 45903501 - 45903555
Alignment:
Q  276 aagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||| || ||||||||||| |||||||| |||||||||||||||||||||||    
T  45903501 aagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45903555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 19849280 - 19849189
Alignment:
Q  173 cacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||| |||| ||| ||||||| |||| | |||||| ||||||||||| ||||| | ||||||||||||||  |||||||||||||    
T  19849280 cacgcatattaagaaatgaaataaaataattattacatataaca-tttttactaaactgccc-tcactttataagaaaaaaacaaacttaaagt 19849189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 30492785 - 30492732
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatt 328  Q
    |||||||| || ||||||||||| |||||||| |||||||||||||||||||||    
T  30492785 aaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 51737285 - 51737368
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagtg 267  Q
    |||||||||| |||||||||||| |||| ||||||||| ||||||| ||||  ||||||||||||  ||||| |||||||||||||||    
T  51737285 attaaggaatagaatgaaataataattagacataacac-ttttact-aaattacccttactttat--gaaaaagacaaacttaaagtg 51737368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 52732773 - 52732696
Alignment:
Q  187 aatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||||||||  | ||||||| |||||||||| || ||||||||||||||| ||| |||||| |||||||    
T  52732773 aatggaatgaaataatcattggatataacac-ttttactaaactg-cccttactttataaggaaaagacaaaattaaagt 52732696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 2728314 - 2728376
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | |||| ||||||| |||||||| ||||||||||||| ||||    
T  2728314 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaattgaat 2728376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 21045322 - 21045238
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||||||||||||||  | ||||  | ||||| |||| || ||||||||||||||||||| |||||| |||||||    
T  21045322 attaaggaatggaatgaaataatcattggatataaggc-ttttattaaactg-cccttactttataagaaaaagacaaaattaaagt 21045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 34534008 - 34534078
Alignment:
Q  134 ctccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatca 204  Q
    |||||||| ||||||||| | ||||| ||||||||||||||| || |||||||||| |||| || ||||||    
T  34534008 ctccttccctttcaaaataagtgtcattttagctaattgcactcagattaaggaattgaataaagtaatca 34534078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 39671069 - 39671153
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||||||||||||| ||||||| |||||||||  ||||||||| |  || ||||||||||||||||  |||||||||||||    
T  39671069 attaagaaatggaatgaaattatcattagacataacac-atttactaaact-acctttactttataagaaaaaaacaaacttaaagt 39671153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 43421087 - 43421171
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||||||||||||||||||||  | |||| |||||| |||||| ||| | |||||||||||||||| |||||| |||||||    
T  43421087 attaagaaatggaatgaaataatcattggatataatactttt-actaaattgctc-ttactttataagaaaaagacaaaattaaagt 43421171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 44855433 - 44855349
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| ||| |||||||||||||||| || ||||| ||||| |||||| ||||| |||||||||||| ||| |||||| |||||||    
T  44855433 attaagaaatagaatgaaataatcattgaatataacgctttt-actaaactgccc-ttactttataaggaaaagacaaaattaaagt 44855349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 56373491 - 56373553
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | |||||||||||| ||||| |  ||||||||||||||||||    
T  56373491 tactccatccgtttcaaaatgagtgtcactttagccaattgaagacatattaaggaatggaat 56373553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 17317950 - 17317999
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||| |||||    
T  17317950 aaaaaattaaagttgtattggaaatgtaatgtgacattcagtttgaaaca 17317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 45049888 - 45049847
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  45049888 attaaggaatgaaatgaaataatcattagacataacactttt 45049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 51906315 - 51906274
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  51906315 attaagaaatggaatgaaataatcaataaacataacactttt 51906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 56556194 - 56556320
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||| ||||| | |||| ||||| | |||||||| || |||||||||| |||||||||   ||||| ||||||||| ||||||| ||||     
T  56556194 tactccctccgttttaaaatgagtgtcgctttaaccaattgcacacagattaaggaattgaatgaaat---cattagacataacac-ttttact-aaatt 56556288  T
Q  232 ccccttactttataagaaaaggacaaacttaa 263  Q
      |||| |||||||||||||  ||||||||||    
T  56556289 atccttgctttataagaaaaatacaaacttaa 56556320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 37654653 - 37654593
Alignment:
Q  130 tctactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||||| ||||||||||||| | ||||  |||||| |||||||| ||||||||||||||    
T  37654653 tctactccctccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatg 37654593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 39985058 - 39984990
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    |||||| ||||||||||||| | |||| ||||||| |||||||  ||||||||||||| |||| |||||    
T  39985058 tactccctccgtttcaaaatgagtgtcgctttagccaattgcatacatattaaggaattgaataaaata 39984990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 1868208 - 1868255
Alignment:
Q  290 aaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| ||| |||| ||||||||||||||||||||||| ||||||    
T  1868208 aaattaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 1868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 29289985 - 29290044
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||||| |||| |||||||| || |||||||| |||| |||||||||||| |||||||||    
T  29289985 aaagtttgaagaaaaaaattgaagttgtattgaaaatataaagtgacattaattttaaaa 29290044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 51930758 - 51930681
Alignment:
Q  187 aatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||| |||  | ||||| ||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  51930758 aatggaatgaaataataattggatataacgctttt-actaaactgccc-ttactttataagaaaatgacaaaattaaagt 51930681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 52957713 - 52957768
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||||||||| | |||| ||||||| |||||||| || |||||||||||||||    
T  52957713 tccgtttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatggaat 52957768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 54512089 - 54512030
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||||||||||  |||||||||| || ||||  ||||||||||||| |||||||||||||    
T  54512089 aaagttggaagataaaaattaaagttatattaaaaatgtaaagtgatattcattttaaaa 54512030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 335
Target Start/End: Complemental strand, 55126541 - 55126494
Alignment:
Q  288 aaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaac 335  Q
    |||||||||| |||||||| |||| |||| ||||||||||||||||||    
T  55126541 aaaaattaaagttgtattgaaaatttaaaatgacattcattttaaaac 55126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 6232141 - 6232191
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||| ||||||    
T  6232141 aaaaaattaaagttgtattgaaaatgtaaattgacatttattttgaaacaa 6232191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 28116484 - 28116422
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | |||||||||| | |||||||| |  |||||||||||||||    
T  28116484 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacggattaaggaatggaat 28116422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 34096060 - 34096010
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||| |||||||||| |||||||| |||| ||||||    
T  34096060 aaaaaattaaaattgtattagaaatgtaaattgacattcgttttgaaacaa 34096010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 38692570 - 38692521
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaat 230  Q
    ||||||||||| |||||||||||||| ||| ||||||| ||||||||||||    
T  38692570 attaaggaatgaaatgaaataatcatcaaagataacac-ttttactaaaat 38692521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 44835387 - 44835341
Alignment:
Q  279 ttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattc 325  Q
    ||||||| ||||||||||| ||||||| |||||||||||||| ||||    
T  44835387 ttggaagaaaaaaattaaagttgtattcgaaatgtaaagtgatattc 44835341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 44855295 - 44855245
Alignment:
Q  279 ttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattt 329  Q
    |||||||  |||| ||||| |||||||||||||||||||||||||| ||||    
T  44855295 ttggaagagaaaacttaaagttgtattggaaatgtaaagtgacatttattt 44855245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 45049773 - 45049707
Alignment:
Q  268 tgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||||| |||||| | || ||||||||||| || ||||  ||||||||||||||||| |||||||||    
T  45049773 tgagagtaaagttcggagaaaaaaattaaaattatattaaaaatgtaaagtgacattaattttaaaa 45049707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 54092003 - 54091953
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||  |||| |||| ||||||||||||||||||||    
T  54092003 aaaaaattaaagttgtattaaaaatctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 34316454 - 34316393
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    ||||||||||||| | |||||||||| | |||||||| || ||||||||||| ||| |||||    
T  34316454 tccgtttcaaaatgagtgtcactttaaccaattgcacacagattaaggaatgaaataaaata 34316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 54092138 - 54092097
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||    
T  54092138 attaaggaatgaaatgaaatagtcattaaacataatactttt 54092097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 54233900 - 54233848
Alignment:
Q  277 agttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||| ||||||||||| |||||||| |||||||||| | ||||||||||    
T  54233900 agttggaag-aaaaaattaaagttgtattgaaaatgtaaagcggcattcatttt 54233848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 54512215 - 54512128
Alignment:
Q  177 catattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||| |||| ||||||||||| |||  | |||||  ||||||||||| ||| | |||||||||||||||| |||||| |||||||    
T  54512215 catattaagaaatgaaatgaaataataattggatataacg-tttttactaaactgctc-ttactttataagaaaatgacaaaattaaagt 54512128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 3093383 - 3093351
Alignment:
Q  302 tattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||| |||||||||||||||||||||||||||    
T  3093383 tattgaaaatgtaaagtgacattcattttaaaa 3093351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 19878889 - 19878817
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatca 204  Q
    |||||| ||||||||||||| | |||| ||||||| |||||| |  | ||||||||||||||| || ||||||    
T  19878889 tactccctccgtttcaaaatgaatgtcgctttagccaattgcgcagagattaaggaatggaataaagtaatca 19878817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 24259750 - 24259718
Alignment:
Q  234 ccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||||| ||||||||||||||    
T  24259750 ccttactttataagaaaatgacaaacttaaagt 24259718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 27653905 - 27653853
Alignment:
Q  142 gtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||||||| | |||| ||||||| |||||||| || |||||||||||||||    
T  27653905 gtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatggaat 27653853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 30022275 - 30022215
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| ||||||||  | ||||||||||| ||| |||||||||||| | |||||||||||    
T  30022275 tttagcaaattgcacatagattaaggaatgaaataaaataatcattatatataacactttt 30022215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 49080394 - 49080450
Alignment:
Q  133 actccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaat 189  Q
    ||||| ||||||||||||| | |||| ||||| | |||||||| |||||||||||||    
T  49080394 actccctccgtttcaaaataagtgtcgctttatccaattgcacacatattaaggaat 49080450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 42259461 - 42259593
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||||||||||||||||| | |||| || |||| |||||||| |  ||||| ||||| ||||| ||||| |||| ||||||||| |||||||||||||    
T  42259461 tactccttccgtttcaaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaatgagataattattagacataacac-ttttactaaaatg 42259559  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     ||||||||||||||||||| ||||| ||||||||    
T  42259560 -cccttactttataagaaaaagacaagcttaaagt 42259593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 337
Target Start/End: Complemental strand, 18886836 - 18886668
Alignment:
Q  182 taaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaa---------------gt 266  Q
    |||| ||||||||||||||||||||| | ||||| | |||||||||| || ||||||||||||||| ||| |||||| |||||               ||    
T  18886836 taagaaatggaatgaaataatcattagatataacgc-ttttactaaactg-cccttactttataaggaaaagacaaaattaaagttgcattgaaaattgt 18886739  T
Q  267 gtgagagaaaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| |||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  18886738 gtgaaagaaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaacaa 18886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 275 - 372
Target Start/End: Original strand, 28044224 - 28044321
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacgg 372  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||        ||||||| |||||| ||||||||||||    
T  28044224 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaattttttttactaaagtgacactcattttgaaacgg 28044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 33056203 - 33056327
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgcccctta 238  Q
    ||||||||||||| | ||||  |||||  ||||||||  | ||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||    
T  33056203 tccgtttcaaaatgagtgtcgttttagtcaattgcacatagattaaggaatgaaatgaaataatcattaaacataacac-ttttactaaactg-ccctta 33056300  T
Q  239 cttta-taagaaaaggacaaacttaaa 264  Q
    ||||| |||||||| |||||| |||||    
T  33056301 ctttattaagaaaaagacaaatttaaa 33056327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 43813437 - 43813499
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  43813437 aaagttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 43813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 36836120 - 36836015
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaac-aannnnnnngactaaagcgacacttattttgaaacgga 373  Q
    ||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||| |||| ||       ||||||||||||||| |||||||||||||    
T  36836120 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttgaaacaaattattttgactaaagcgacactcattttgaaacgga 36836021  T
Q  374 tgagta 379  Q
     |||||    
T  36836020 ggagta 36836015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 3681015 - 3681077
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  3681015 aaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 17869298 - 17869236
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||    
T  17869298 aaagttggaaggaaaaaattaaagttgcattggaaatgtaaaatgacattcattttgaaacaa 17869236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 30515034 - 30514972
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  30515034 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 31416844 - 31416906
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  31416844 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 382
Target Start/End: Original strand, 36447163 - 36447270
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacggat 374  Q
    |||||||||||  |||||||||| |||||||| ||||||||| ||||||||||||| ||||||         ||||||||||||| ||||||||||||||    
T  36447163 aaagttggaagagaaaaattaaaattgtattgaaaatgtaaaatgacattcattttgaaacaatttttttagctaaagcgacactcattttgaaacggat 36447262  T
Q  375 gagtaata 382  Q
     |||||||    
T  36447263 aagtaata 36447270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 34733500 - 34733418
Alignment:
Q  182 taaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||| |||| |||||||||||||||| ||||||||||||| |||||| | ||| |||||||||||||||| ||||||||||||||    
T  34733500 taagaaatgaaatgaaataatcattagacataacactttt-actaaactaccc-ttactttataagaaaaagacaaacttaaagt 34733418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 19920376 - 19920423
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19920376 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaa 19920423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 40207299 - 40207432
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcat----taaacataacactttttactaa 227  Q
    |||||| ||||||||||||| | |||  ||||||| |||||||| |||||||||| || ||||| |||||||||    || | ||||||| |||||||||    
T  40207299 tactccatccgtttcaaaatgagtgttgctttagccaattgcacacatattaaggtattgaatg-aataatcattagatatatataacac-ttttactaa 40207396  T
Q  228 aatgccccttactttataagaaaaggacaaacttaaa 264  Q
    | || ||||||||||||||||||| ||||||||||||    
T  40207397 actg-cccttactttataagaaaatgacaaacttaaa 40207432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 42121772 - 42121651
Alignment:
Q  143 tttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttacttt 242  Q
    ||||||||| | |||| ||||||| |||||||| || ||||||||||| ||| |||||||||||| ||||| ||| |||||||||| ||  |||||||||    
T  42121772 tttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcac-ttttactaaactg-accttacttt 42121675  T
Q  243 ataagaaaaggacaaacttaaagt 266  Q
    || |||||| || | |||||||||    
T  42121674 attagaaaaagatacacttaaagt 42121651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 1103545 - 1103483
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  1103545 aaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 1103483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 17869442 - 17869346
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||| || ||||||||||| |||||||||||||||| ||||||||||||| | |||| || |  ||||||||||||||||  |||||||||||||    
T  17869442 aattgcacacagattaaggaatgaaatgaaataatcattagacataacactttt-attaaattgtct-ttactttataagaaaaatacaaacttaaagt 17869346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 19906475 - 19906413
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||| ||||||    
T  19906475 aaagttggaagaaaaaaataaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 22597291 - 22597229
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  22597291 aaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 22597229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 32275265 - 32275203
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||| ||||||    
T  32275265 aaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtggcattcattttgaaacaa 32275203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 32275400 - 32275304
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||| ||  ||||||||||| || || ||||||||||||||||   ||||||||||||    
T  32275400 aattgcacacatattaagaaatgaaatgaaataatcattaaacatgac-gtttttactaaactg-cctttactttataagaaaaaatcaaacttaaagt 32275304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 32873268 - 32873318
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  32873268 aaaaaattaaaattgtattggaaatataaagtgacattcattttaaaacaa 32873318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 36447694 - 36447756
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| |||| |||||||| ||||||||||||||||    
T  36447694 aaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttaaaacaa 36447756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 40298908 - 40298846
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  40298908 aaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 40298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 40299079 - 40298978
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | ||||  |||||| |||||||| || ||||||||||| ||||||||||| |||  ||||||||| |||||||||| ||    
T  40299079 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataataattggacataacac-ttttactaaactg 40298981  T
Q  232 ccc 234  Q
    |||    
T  40298980 ccc 40298978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 42121618 - 42121549
Alignment:
Q  269 gagagaaaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||| ||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||| ||||||    
T  42121618 gagagtaaagttggaagaaaaaaaattaaagttgtattggaaatataaagtgacattcattttgaaacaa 42121549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 34002225 - 34002277
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcat 327  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  34002225 aaagttggaagaataaaattaaacttgtattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 3680890 - 3680967
Alignment:
Q  187 aatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||||||||| |||||| || |||||||||| || | ||||||||||||||||| |||||| |||||||    
T  3680890 aatggaatgaaataatcattagacataaaac-ttttactaaactg-ctcttactttataagaaaaagacaaatttaaagt 3680967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 19288440 - 19288495
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  19288440 aaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 19288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 22627451 - 22627494
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  22627451 aaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 22627494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 42044072 - 42044127
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||||    
T  42044072 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattaatttt 42044127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 1742232 - 1742170
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||||    
T  1742232 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaat 1742170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 18733502 - 18733452
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  18733502 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 18733452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 22627314 - 22627398
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||| |||||||||||| |||||||||||||  ||||||||| || || ||||||||||| || | ||||||||||||||    
T  22627314 attaaggaatgaaatgaaataatcgttaaacataacac-atttactaaactg-cctttactttataaaaataagacaaacttaaagt 22627398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 32345928 - 32345990
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||| |||||||||||| ||||||    
T  32345928 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 32345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 41906026 - 41906088
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||  |||| ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  41906026 aaagttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaacaa 41906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 5723053 - 5723009
Alignment:
Q  286 gaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  5723053 gaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 5723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 26527489 - 26527548
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    |||||| |||| ||||||||||| |||||||| ||||||||| | |||||||||||||||    
T  26527489 aaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcattttaaaa 26527548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 40805073 - 40805026
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  40805073 aaaaaattaaagttgtattgtaaatgtaaagtgacatttattttaaaa 40805026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 26963540 - 26963478
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||  |||||| ||||| ||||||    
T  26963540 aaagttggaagaaaaaaattaaagttgcattggaaatgtaaatagacatttattttgaaacaa 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 42259641 - 42259702
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||| | ||||||||||||||||||    
T  42259641 aaagttggaag-aaaaaattaaagttgtattgaaaacgtaaaataacattcattttaaaacaa 42259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 18733675 - 18733586
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||| | ||||||||||| | ||||  |||||  ||||| || || |||||| | |||||||||||||||||||| ||||||||||||    
T  18733675 tactccattcgtttcaaaataagtgtcgttttagtcaattgtacacaaattaagtagtggaatgaaataatcattaagcataacactttt 18733586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 42010553 - 42010619
Alignment:
Q  198 ataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||| |||||| | ||||||||||| ||||| ||| |||||||||||| ||||||||||||||    
T  42010553 ataatcattagacataata-tttttactaaactgccc-ttattttataagaaaaagacaaacttaaagt 42010619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 30833186 - 30833245
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||| ||| ||||||| ||| |||||||| ||||||||| ||| |||||||||||||    
T  30833186 aaagttgaaagaaaaaaataaaagttgtattgaaaatgtaaaatgatattcattttaaaa 30833245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 10684923 - 10684985
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| ||||||||||   |||||||||| ||||||    
T  10684923 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcattttgaaacaa 10684985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 19920218 - 19920284
Alignment:
Q  155 tgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||| |||||  |||||||  || ||||||||||| |||||||||||||||| |||| ||||||||    
T  19920218 tgtcattttagtcaattgcatacaaattaaggaatgaaatgaaataatcattagacatgacactttt 19920284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 27947411 - 27947473
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| ||||||||||||| | |||||||||| | |||||||| |||||||| |||| ||||    
T  27947411 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacatattaatgaattgaat 27947473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 28044113 - 28044185
Alignment:
Q  192 aatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||  | |||||  ||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  28044113 aatgaaataatcattggatataacg-tttttactaaactgccc-ttactttataagaaaaagacaaaattaaagt 28044185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 31416672 - 31416734
Alignment:
Q  142 gtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatca 204  Q
    |||| ||||| ||||||||||||||||||||||| |  ||||||||||| ||| || ||||||    
T  31416672 gttttaaaatgattgtcactttagctaattgcacacgaattaaggaatgaaataaagtaatca 31416734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 34002092 - 34002177
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||| |||||||||||||||  | ||||||| |||  ||||| ||| | |||||||||||||||| |||||| |||||||    
T  34002092 attaagaaatgaaatgaaataatcattggatataacacctttg-ctaaactgcactttactttataagaaaaagacaaaattaaagt 34002177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 41905895 - 41905979
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||| | |||||||||||||  | ||||| ||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  41905895 attaagaaatgaactgaaataatcattggatataacgctttt-actaaactgccc-ttactttataagaaaaagacaaaattaaagt 41905979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 47272362 - 47272262
Alignment:
Q  162 ttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaactt 261  Q
    ||||| |||||||| || ||||| ||||| |||| ||||| ||||||||||||||  |||||||||| || |||||  |||||| ||||| ||||||| |    
T  47272362 ttagccaattgcacacagattaaagaatgaaatggaataaccattaaacataaca-attttactaaactg-cccttgttttatatgaaaaagacaaacat 47272265  T
Q  262 aaa 264  Q
    |||    
T  47272264 aaa 47272262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 48838628 - 48838704
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataa 246  Q
    |||||||| || ||||||||||  |||||||||||||||| |||||||| ||| ||||||| ||  |||||||||||||    
T  48838628 aattgcacacaaattaaggaataaaatgaaataatcattagacataaca-tttatactaaactg-accttactttataa 48838704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 375
Target Start/End: Original strand, 33056443 - 33056472
Alignment:
Q  346 actaaagcgacacttattttgaaacggatg 375  Q
    ||||||||||||||||||||||||||||||    
T  33056443 actaaagcgacacttattttgaaacggatg 33056472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 266
Target Start/End: Original strand, 10684841 - 10684873
Alignment:
Q  234 ccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||||| ||||||||||||||    
T  10684841 ccttactttataagaaaaagacaaacttaaagt 10684873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 19906655 - 19906587
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    |||||| ||||||||||||| | |||| ||||||| ||||||||    ||||||||||||||| |||||    
T  19906655 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaaata 19906587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 26963622 - 26963590
Alignment:
Q  234 ccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||||| ||||||||||||||    
T  26963622 ccttactttataagaaaaagacaaacttaaagt 26963590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 39117584 - 39117636
Alignment:
Q  278 gttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    |||||||| ||| ||||||| |||||||| |||||||||  ||||||||||||    
T  39117584 gttggaagaaaataattaaagttgtattgaaaatgtaaaacgacattcatttt 39117636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 47271787 - 47271727
Alignment:
Q  275 aaagttggaaggaaaaaat-taaatttgtattggaaatgtaaagtgacattcattttaaaa 334  Q
    ||||||||||| ||||||  |||| ||||||||||||| || |||| ||||||||||||||    
T  47271787 aaagttggaagaaaaaaaactaaagttgtattggaaatctagagtgtcattcattttaaaa 47271727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 12828624 - 12828725
Alignment:
Q  163 tagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaactta 262  Q
    |||| |||||||| || ||||| ||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||| ||||| ||||    
T  12828624 tagccaattgcacacaaattaatgaatgaaatgaaataatcattagacataacac-ttttactaaactg-cccttactttataagaaaaagacaagctta 12828721  T
Q  263 aagt 266  Q
    ||||    
T  12828722 aagt 12828725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 6143144 - 6143082
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  6143144 aaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 12828773 - 12828835
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  12828773 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 373
Target Start/End: Complemental strand, 29927268 - 29927169
Alignment:
Q  275 aaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaannnnnnngactaaagcgacacttattttgaaacgga 373  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||       | ||||| ||||||| |||||||||||||    
T  29927268 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaatttttttggctaaaacgacactcattttgaaacgga 29927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 32258782 - 32258720
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  32258782 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 32258720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 34576604 - 34576542
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  34576604 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 23936540 - 23936628
Alignment:
Q  177 catattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||| ||||||||||||||||||||| | |||||| |||||||| || ||||| ||||||||||||||||  ||||| |||||||    
T  23936540 catattaagaaatggaatgaaataatcattagatataaca-tttttactgaattgccctttactttataagaaaaaaacaaatttaaagt 23936628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 31275733 - 31275835
Alignment:
Q  275 aaagttggaaggaaaa-aattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa-nnnnnnngactaaagcgacacttattttgaaacgg 372  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||    
T  31275733 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaatttttttttgctaaagcgacacttattttgaaacgg 31275832  T
Q  373 atg 375  Q
    |||    
T  31275833 atg 31275835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 29915602 - 29915539
Alignment:
Q  275 aaagttggaaggaaaaaa-ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  29915602 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 4132067 - 4132129
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  4132067 aaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 6140659 - 6140598
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  6140659 aaagttggaag-aaaaaattaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 10494854 - 10494916
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  10494854 aaagttgaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 17345228 - 17345290
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| |||||| ||||||| |||||||||||||| ||||||||||||||||    
T  17345228 aaagttggaagaaaaatattaaagttgtattagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 266
Target Start/End: Complemental strand, 29915743 - 29915650
Alignment:
Q  172 gcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||| ||||||||| ||| |||||||||||| |||| | ||||||||||| |||||| ||||  |||||||||||||||| ||||||| ||||||    
T  29915743 gcacacatattaagaaattgaatgaaataataattagaaataacactttt-actaaactgccatttactttataagaaaaagacaaacataaagt 29915650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 8052394 - 8052343
Alignment:
Q  286 gaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  8052394 gaaaaaattaaagttgtattagaaatataaagtgacattcattttaaaacaa 8052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 29927389 - 29927316
Alignment:
Q  191 gaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||||||||| ||||||||||||| ||||| ||  || |||||||||||||||| ||||||||||||||    
T  29927389 gaatgaaataatcattagacataacactttt-actaacatatcc-ttactttataagaaaaagacaaacttaaagt 29927316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 1924768 - 1924818
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  1924768 aaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 1924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 4123947 - 4124009
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||| ||| ||||||||||| |||||||  ||||||||||||||||||||||| ||||||    
T  4123947 aaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 11785195 - 11785255
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  11785195 aaagttggaag-aaaaaattaaagttgtattggaaatgtaaagtgaca-tcattttgaaacaa 11785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 31275553 - 31275685
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatg 231  Q
    |||||| ||||||||||||| | |||   |||||| |||||||| || ||||||||| | |||||||||| ||||| || |||||| |||||| ||| ||    
T  31275553 tactccctccgtttcaaaataagtgttgttttagccaattgcacacagattaaggaaagaaatgaaataaccattagacgtaacac-ttttaccaaactg 31275651  T
Q  232 ccccttactttataagaaaaggacaaacttaaagt 266  Q
     |||||  |||||| ||||| ||||||||||||||    
T  31275652 -cccttgttttatatgaaaaagacaaacttaaagt 31275685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 34439368 - 34439453
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||| |||| |||||||||||||||| | |||||| |||||| |||| ||||| ||| |||||||||||| ||||||| ||||||    
T  34439368 attaagaaatgaaatgaaataatcattagatataaca-tttttattaaattgccctttattttataagaaaaagacaaacataaagt 34439453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 3015964 - 3015921
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  3015964 aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 3015921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 26669190 - 26669245
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||| |  |||||||||| ||||||||||||| ||||||||||||||||||    
T  26669190 aaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcatttt 26669245  T

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Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 30627315 - 30627233
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    ||||||| ||||| | ||||  ||||| ||||||||| || ||||| ||||| |||||||||||||||| | |||||||||||    
T  30627315 tccgttttaaaatgagtgtcgttttagataattgcacacaaattaatgaatgaaatgaaataatcattagatataacactttt 30627233  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 34439506 - 34439567
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||| ||||||||||||| ||||||    
T  34439506 aaagttggaag-aaagaatgaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 34439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 8052539 - 8052486
Alignment:
Q  168 aattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||||||| || |||||| |||| |||||||||||||||| |||||||||||||    
T  8052539 aattgcacacaaattaagaaatgaaatgaaataatcattagacataacactttt 8052486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 23936674 - 23936735
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaaca 336  Q
    ||||||||||| ||||||| ||| ||| |||| ||||||||||| ||||||||||| |||||    
T  23936674 aaagttggaagaaaaaaatgaaagttgcattgaaaatgtaaagtaacattcattttgaaaca 23936735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 1135159 - 1135104
Alignment:
Q  139 tccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    ||||||||||||| | |||  ||||||| |||||||| ||||||||||||||||||    
T  1135159 tccgtttcaaaataagtgttgctttagccaattgcacacatattaaggaatggaat 1135104  T

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Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 19689945 - 19689988
Alignment:
Q  294 taaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||    
T  19689945 taaagttgtattagaaatgtaaagtaacattcattttaaaacaa 19689988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 26189568 - 26189506
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||   ||||||||||| ||||||    
T  26189568 aaagttggaagaaaaatattaaagttgcattggaaatgtaaaacaacattcattttgaaacaa 26189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 29713318 - 29713380
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||||||||||| ||||| | |||| ||||||  |||||||| | ||||||||||||||||    
T  29713318 tactccttccgttttaaaatgagtgtcgctttagtcaattgcacacgtattaaggaatggaat 29713380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 30627139 - 30627089
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||| ||||||    
T  30627139 aaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaa 30627089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 6992543 - 6992511
Alignment:
Q  234 ccttactttataagaaaaggacaaacttaaagt 266  Q
    |||||||||||||||||| ||||||||||||||    
T  6992543 ccttactttataagaaaaagacaaacttaaagt 6992511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 26669095 - 26669142
Alignment:
Q  218 tttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  26669095 tttttactaaattgccc-ttactttataagaaaaagacaaaattaaagt 26669142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 321786 - 321724
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  321786 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttaaaacaa 321724  T

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Target: scaffold0189 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 13151 - 13213
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    |||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13151 aaagttgggagaaaaaaattaaaattgtattggaaatgtaaagtgacgttcattttaaaacaa 13213  T

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Target: scaffold0189; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 13009 - 13079
Alignment:
Q  161 tttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgc 232  Q
    ||||| ||||||||| || ||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  13009 tttagttaattgcacacagattaaggaatgaaatgaaataatcattagacataacac-ttttactaaaatgc 13079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 4201 - 4263
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||| ||||| ||||||||||||    
T  4201 aaagttggaagaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 4065 - 4153
Alignment:
Q  177 catattaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttat-aagaaaaggacaaacttaaagt 266  Q
    ||||||||| |||||||||||| |||||||| |||||||| ||||||| ||| ||  ||||||||||| || |||| ||||||||||||||    
T  4065 catattaagaaatggaatgaaacaatcattatacataaca-tttttacgaaattg-tccttactttataaaaaaaatgacaaacttaaagt 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 70547 - 70609
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||    
T  70547 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 70609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 6239 - 6297
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatg 190  Q
    |||||||||||||||||||| | ||||||||||||||||||||| |  |||||||||||    
T  6239 tactccttccgtttcaaaatgagtgtcactttagctaattgcacacggattaaggaatg 6297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 1603 - 1548
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcatttt 330  Q
    ||||||||| |  |||||||||| ||||||||||||| ||||||||||||||||||    
T  1603 aaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcatttt 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 1698 - 1651
Alignment:
Q  218 tttttactaaaatgccccttactttataagaaaaggacaaacttaaagt 266  Q
    ||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  1698 tttttactaaattgccc-ttactttataagaaaaagacaaaattaaagt 1651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 8206 - 8156
Alignment:
Q  287 aaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  8206 aaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaacaa 8156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 31667 - 31623
Alignment:
Q  293 ttaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||    
T  31667 ttaaaattttattggaaatgtaaagtaacattcattttaaaacaa 31623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 31753 - 31695
Alignment:
Q  163 tagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacactttt 221  Q
    |||| |||||||| || ||||| ||||| |||||||||||||||| | |||||||||||    
T  31753 tagccaattgcacacaaattaacgaatgaaatgaaataatcattagagataacactttt 31695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 31; Significance: 0.00000005; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 1691 - 1646
Alignment:
Q  287 aaaaaattaaatttgtatt--ggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||    
T  1691 aaaaaattaaagttgtattttggaaatgtaaagtgacattcatttt 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 1766 - 1690
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaa 258  Q
    |||||| |||| |||||||||||||||  | |||||| ||||||||||| || || |||||||||||||||| ||||||    
T  1766 attaagaaatgaaatgaaataatcattggatataaca-tttttactaaactgacc-ttactttataagaaaaagacaaa 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 9430 - 9385
Alignment:
Q  287 aaaaaattaaatttgtatt--ggaaatgtaaagtgacattcatttt 330  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||    
T  9430 aaaaaattaaagttgtattttggaaatgtaaagtgacattcatttt 9385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 9505 - 9429
Alignment:
Q  180 attaaggaatggaatgaaataatcattaaacataacactttttactaaaatgccccttactttataagaaaaggacaaa 258  Q
    |||||| |||| |||||||||||||||  | |||||| ||||||||||| || || |||||||||||||||| ||||||    
T  9505 attaagaaatgaaatgaaataatcattggatataaca-tttttactaaactgacc-ttactttataagaaaaagacaaa 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 7792 - 7852
Alignment:
Q  275 aaagttggaaggaaaaaattaaatttgtattggaaatgtaaagtgacattcattttaaaacaa 337  Q
    ||||||||||| ||||| | ||| |||||||  ||||||||||||||||||||||||||||||    
T  7792 aaagttggaag-aaaaattaaaagttgtatta-aaatgtaaagtgacattcattttaaaacaa 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 24652 - 24720
Alignment:
Q  132 tactccttccgtttcaaaattattgtcactttagctaattgcacgcatattaaggaatggaatgaaata 200  Q
    |||||| ||||||| ||||| | |||| ||||||| | ||| || |||||||||||||||||| |||||    
T  24652 tactccatccgttttaaaatgagtgtcgctttagccatttgtacacatattaaggaatggaataaaata 24720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 62860 - 62812
Alignment:
Q  146 caaaattattgtcactttagctaattgcacgcatattaaggaatggaat 194  Q
    |||||| | |||| ||||||| |||||||| ||||||||||||||||||    
T  62860 caaaatgagtgtcgctttagccaattgcacacatattaaggaatggaat 62812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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