View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19411_low_4 (Length: 346)
Name: NF19411_low_4
Description: NF19411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19411_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 10397853 - 10398177
Alignment:
| Q |
1 |
taacagaagcatgttgcctctctgaccctcttaccaacaaatgatcaatcccagaagaactcaaactaaccgaacgtgacaaattgttattaccaatctt |
100 |
Q |
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| T |
10397853 |
taacagaagcatgttgcctctctgaccctcttaccaacaaatgatcaatcccagaagaactcaaactaaccgaacgtgacaaattgttattaccaatctt |
10397952 |
T |
|
| Q |
101 |
ttcagccacggatccattgttcacattagattgctgctgtattaaaacctccctatcactatcactctcggaacgcagttcaggaagtgattgtgtgcta |
200 |
Q |
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| T |
10397953 |
ttcagccacggatccattgttcacattagattgctgctgtattaaaacctccctatcactatcactctcggaacgcagttcaggaagtgattgtgtgcta |
10398052 |
T |
|
| Q |
201 |
caactaataccaatatcatcatgtgaatgcgaattcgaagaaattgaatttcctctagataatgaattgacactagactgaaccaatttcgtagcagctg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
10398053 |
caactaataccaatatcatcatgtgaatgcgaattcaaagaaattgaatttcctctagataatgaattgacactagactgaaccaattttgtagcagctg |
10398152 |
T |
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| Q |
301 |
aagaacgtgaattggtaatagacct |
325 |
Q |
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|||||||||||||| |||||||||| |
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| T |
10398153 |
aagaacgtgaattgctaatagacct |
10398177 |
T |
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