View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19412_low_3 (Length: 466)
Name: NF19412_low_3
Description: NF19412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19412_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 12 - 448
Target Start/End: Complemental strand, 7100414 - 7099977
Alignment:
| Q |
12 |
tcatcacaatttttgtaagttttgttttactctatttatcattgtctttggattgctctacatatatataggttttggttgtcttattatttgtttcact |
111 |
Q |
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| T |
7100414 |
tcatcacaatttttgtaagttttgttttactctatttatcattgtctctggattgctctacatgtatataggttttggttgccttattatttgtttcact |
7100315 |
T |
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| Q |
112 |
tttcatgttgaattcataataagtggccc-atctatgtgaaacaaatctttcaagtgtgtatcatgagtactaaatgagatagctgaggaattttccaga |
210 |
Q |
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| T |
7100314 |
tttcatgttgaattcataataagtggccccatctatgtgaaacaaatctttcaagtgtgtatcatgagtactaaatgagatagctgaggaattttccaga |
7100215 |
T |
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| Q |
211 |
aactatgattttgggttgttgaaagtgaagataaacaatgattcaactaaaatgtatagagaaaacaaagatgatagataaggtacaaaatgtcattatc |
310 |
Q |
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| T |
7100214 |
aactatgattttgggttgttgaaagtgaagataaacaatgattcaactaaaatgtatagagaaaacaaagatgatagataaggtacaaaatgtcattatc |
7100115 |
T |
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| Q |
311 |
ctgtgccttagagataaggtgttgagggaagtcgcgaaggagaagactccagcgacaatgtggaccaagttagaactggtgtacttggccaagtcattgg |
410 |
Q |
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| T |
7100114 |
ctgtgccttagagataaggtgttgagggaagtcgcgaaggagaagactccagcgacaatgtggaccaagttagaactagtgtacttggccaagtcattgg |
7100015 |
T |
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| Q |
411 |
atcataggctatgtctaaaacaacaactttactcattt |
448 |
Q |
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| T |
7100014 |
atcataggctatgtctaaaacaacaactttactcattt |
7099977 |
T |
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