View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19413_high_19 (Length: 274)
Name: NF19413_high_19
Description: NF19413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19413_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 12327165 - 12327405
Alignment:
| Q |
12 |
aagaatattattgaaataatccattaattagatgtatatatatcattgatttttataaaagaaaaggatatatatgattcagattttataccaaatgtct |
111 |
Q |
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| T |
12327165 |
aagaatattattgaaataatccattaattagatgtatatatatcattgatttttataaaagaaaaggatatatatgattcagattttataccaaatgtct |
12327264 |
T |
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| Q |
112 |
gaaaaggttgtccaatatattagtattctcattctaatatatgcaacttaaaagaaattctctatgttttctccgcagatgaaacactactagggcaatc |
211 |
Q |
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| T |
12327265 |
gaaaaggttgtccaatatattagtattctcattctcatatatgcaacttaaaagaaattctctatgttttctccgcagatgaaacactactagggcaatc |
12327364 |
T |
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| Q |
212 |
tgaatggttgatagcaatatataatacctgcatgtaaaacc |
252 |
Q |
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| T |
12327365 |
tgaatggttgatagcaatatatactacctgcatgtaaaacc |
12327405 |
T |
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