View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19413_low_12 (Length: 352)

Name: NF19413_low_12
Description: NF19413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19413_low_12
NF19413_low_12
[»] chr4 (29 HSPs)
chr4 (18-158)||(38735676-38735817)
chr4 (174-314)||(48528498-48528646)
chr4 (226-289)||(48529855-48529918)
chr4 (231-297)||(16605693-16605759)
chr4 (230-297)||(14801826-14801893)
chr4 (226-281)||(40387553-40387608)
chr4 (226-287)||(11857978-11858039)
chr4 (230-299)||(53701902-53701971)
chr4 (234-282)||(17356208-17356256)
chr4 (230-282)||(34765666-34765718)
chr4 (226-282)||(52298112-52298168)
chr4 (230-297)||(35028269-35028336)
chr4 (226-281)||(41583518-41583573)
chr4 (229-272)||(43155792-43155835)
chr4 (230-273)||(50418932-50418975)
chr4 (230-272)||(13058127-13058169)
chr4 (230-272)||(23613399-23613441)
chr4 (230-272)||(36009109-36009151)
chr4 (230-272)||(44967334-44967376)
chr4 (230-272)||(49879472-49879514)
chr4 (231-297)||(56014816-56014882)
chr4 (231-272)||(4982991-4983032)
chr4 (231-272)||(9145031-9145072)
chr4 (230-271)||(24711201-24711242)
chr4 (231-272)||(27934623-27934664)
chr4 (231-272)||(42738296-42738337)
chr4 (311-344)||(48528694-48528727)
chr4 (222-250)||(32062671-32062699)
chr4 (226-254)||(52298300-52298328)
[»] chr1 (32 HSPs)
chr1 (226-316)||(34850317-34850407)
chr1 (223-297)||(25065901-25065975)
chr1 (230-297)||(4960630-4960697)
chr1 (226-287)||(22103787-22103848)
chr1 (230-282)||(17662136-17662188)
chr1 (226-314)||(27999105-27999193)
chr1 (230-297)||(14879061-14879128)
chr1 (226-289)||(34849097-34849160)
chr1 (230-297)||(43758912-43758979)
chr1 (230-297)||(44523407-44523474)
chr1 (230-296)||(6367652-6367718)
chr1 (226-272)||(10304009-10304055)
chr1 (223-269)||(16970834-16970880)
chr1 (226-287)||(13245936-13245997)
chr1 (230-282)||(1103551-1103603)
chr1 (226-297)||(9443658-9443730)
chr1 (230-282)||(40210656-40210708)
chr1 (229-272)||(183487-183530)
chr1 (229-272)||(19017925-19017968)
chr1 (230-297)||(24009812-24009879)
chr1 (229-272)||(25647973-25648016)
chr1 (226-272)||(10304151-10304197)
chr1 (230-296)||(13914339-13914405)
chr1 (174-221)||(17661865-17661914)
chr1 (231-297)||(37578463-37578529)
chr1 (230-272)||(42248563-42248605)
chr1 (226-287)||(21444680-21444741)
chr1 (231-272)||(24905432-24905473)
chr1 (231-272)||(28011454-28011495)
chr1 (231-272)||(31514582-31514623)
chr1 (231-272)||(33442859-33442900)
chr1 (230-270)||(40772597-40772637)
[»] chr3 (23 HSPs)
chr3 (231-314)||(25107304-25107387)
chr3 (230-297)||(33156265-33156332)
chr3 (226-287)||(20704608-20704669)
chr3 (226-287)||(30380932-30380993)
chr3 (230-282)||(26463884-26463936)
chr3 (229-297)||(33689650-33689718)
chr3 (230-297)||(9294229-9294296)
chr3 (226-280)||(21783783-21783837)
chr3 (231-297)||(25108366-25108432)
chr3 (220-272)||(42854515-42854565)
chr3 (230-297)||(40758234-40758301)
chr3 (230-297)||(43384373-43384440)
chr3 (226-281)||(44654790-44654845)
chr3 (230-281)||(51994173-51994224)
chr3 (230-272)||(2796269-2796311)
chr3 (230-272)||(23458275-23458317)
chr3 (231-272)||(8041707-8041748)
chr3 (231-272)||(10770756-10770797)
chr3 (223-272)||(29192118-29192167)
chr3 (223-272)||(32717073-32717122)
chr3 (231-272)||(36314563-36314604)
chr3 (231-272)||(48322642-48322683)
chr3 (231-272)||(54466514-54466555)
[»] chr7 (23 HSPs)
chr7 (223-297)||(45915751-45915825)
chr7 (230-297)||(5457178-5457245)
chr7 (230-297)||(23181265-23181332)
chr7 (230-282)||(32053429-32053481)
chr7 (230-297)||(10935884-10935951)
chr7 (226-293)||(11397464-11397531)
chr7 (230-297)||(2640449-2640516)
chr7 (230-269)||(6253561-6253600)
chr7 (230-297)||(20426601-20426668)
chr7 (230-297)||(28469279-28469346)
chr7 (223-282)||(38643633-38643692)
chr7 (230-297)||(40379859-40379926)
chr7 (230-272)||(3914228-3914270)
chr7 (230-272)||(17102110-17102152)
chr7 (230-272)||(27396891-27396933)
chr7 (230-272)||(27991829-27991871)
chr7 (230-272)||(42731509-42731551)
chr7 (223-272)||(4227140-4227189)
chr7 (223-272)||(12644101-12644150)
chr7 (231-272)||(30948425-30948466)
chr7 (231-272)||(32680860-32680901)
chr7 (223-272)||(45914607-45914656)
chr7 (223-280)||(47558113-47558170)
[»] chr8 (25 HSPs)
chr8 (226-297)||(31873170-31873241)
chr8 (230-282)||(4405946-4405998)
chr8 (226-299)||(2693785-2693859)
chr8 (230-297)||(16388797-16388864)
chr8 (230-272)||(12273149-12273191)
chr8 (230-296)||(36928566-36928632)
chr8 (231-312)||(30711973-30712054)
chr8 (231-312)||(30719750-30719831)
chr8 (230-273)||(23698539-23698582)
chr8 (230-297)||(35756672-35756739)
chr8 (230-272)||(1425318-1425360)
chr8 (231-297)||(20385659-20385725)
chr8 (230-272)||(23663810-23663852)
chr8 (231-297)||(30710946-30711012)
chr8 (232-282)||(31608799-31608849)
chr8 (230-272)||(38862708-38862750)
chr8 (230-272)||(39071766-39071808)
chr8 (231-272)||(3041721-3041762)
chr8 (226-287)||(22890275-22890336)
chr8 (226-287)||(24085860-24085921)
chr8 (231-272)||(36325325-36325366)
chr8 (231-272)||(38845564-38845605)
chr8 (231-272)||(40775915-40775956)
chr8 (231-272)||(44407122-44407163)
chr8 (230-282)||(13186150-13186202)
[»] chr2 (20 HSPs)
chr2 (226-288)||(10840562-10840624)
chr2 (230-296)||(36755183-36755249)
chr2 (230-296)||(37895619-37895685)
chr2 (226-287)||(11721371-11721432)
chr2 (230-282)||(15848178-15848230)
chr2 (225-296)||(11349477-11349548)
chr2 (226-273)||(17266484-17266531)
chr2 (230-297)||(25893489-25893556)
chr2 (230-297)||(36382251-36382318)
chr2 (230-297)||(39423605-39423672)
chr2 (230-272)||(6657968-6658010)
chr2 (226-272)||(6846870-6846916)
chr2 (230-272)||(11163319-11163361)
chr2 (230-272)||(16099145-16099187)
chr2 (275-313)||(21370457-21370495)
chr2 (230-272)||(39498400-39498442)
chr2 (230-272)||(44714057-44714099)
chr2 (226-287)||(11689627-11689688)
chr2 (231-272)||(14900748-14900789)
chr2 (231-272)||(33739794-33739835)
[»] scaffold0347 (1 HSPs)
scaffold0347 (225-297)||(14536-14608)
[»] chr6 (11 HSPs)
chr6 (230-297)||(33517624-33517691)
chr6 (230-287)||(26463269-26463326)
chr6 (230-297)||(21627984-21628051)
chr6 (230-272)||(12080726-12080768)
chr6 (230-272)||(30803951-30803993)
chr6 (226-287)||(1215147-1215208)
chr6 (231-272)||(28000650-28000691)
chr6 (230-295)||(28498298-28498363)
chr6 (230-295)||(29810709-29810774)
chr6 (231-272)||(30337540-30337581)
chr6 (229-297)||(33647052-33647120)
[»] scaffold0005 (1 HSPs)
scaffold0005 (230-297)||(37834-37901)
[»] chr5 (21 HSPs)
chr5 (230-297)||(13962954-13963021)
chr5 (230-297)||(14194694-14194761)
chr5 (230-272)||(5024314-5024356)
chr5 (230-296)||(29646634-29646700)
chr5 (230-296)||(32242332-32242398)
chr5 (226-282)||(12904840-12904896)
chr5 (226-297)||(14848977-14849049)
chr5 (230-273)||(8322494-8322537)
chr5 (230-273)||(35920479-35920522)
chr5 (230-297)||(39453390-39453457)
chr5 (230-272)||(3529138-3529180)
chr5 (230-272)||(5993979-5994021)
chr5 (230-272)||(28269684-28269726)
chr5 (230-272)||(28771134-28771176)
chr5 (230-272)||(35512238-35512280)
chr5 (230-272)||(38442158-38442200)
chr5 (230-272)||(38475295-38475337)
chr5 (231-272)||(297279-297320)
chr5 (231-272)||(6758130-6758171)
chr5 (231-272)||(31482667-31482708)
chr5 (231-272)||(41930607-41930648)
[»] scaffold0031 (1 HSPs)
scaffold0031 (230-295)||(69055-69120)
[»] scaffold0008 (1 HSPs)
scaffold0008 (230-303)||(239816-239889)
[»] scaffold0027 (1 HSPs)
scaffold0027 (226-297)||(14061-14132)
[»] scaffold0007 (1 HSPs)
scaffold0007 (230-272)||(1859-1901)
[»] scaffold0559 (1 HSPs)
scaffold0559 (231-272)||(1324-1365)
[»] scaffold0024 (1 HSPs)
scaffold0024 (231-272)||(141859-141900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (231-272)||(139763-139804)


Alignment Details
Target: chr4 (Bit Score: 126; Significance: 6e-65; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 38735817 - 38735676
Alignment:
Q  18 attacaaggttggtgcaccatgtgtgaaaccatgttctgtgttagaatgtctatttctctcttggtcttatcttacccgttcagcttttgcaatgattct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38735817 attacaaggttggtgcaccatgtgtgaaaccatgttctgtgttagaatgtctatttctctcttggtcttatcttacccgttctgcttttgcaatgattct 38735718  T
Q  118 gaaaattcaagatagaagattta-aaaatgtttttatattta 158  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  38735717 gaaaattcaagatataagatttaaaaaatgtttttatattta 38735676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 314
Target Start/End: Original strand, 48528498 - 48528646
Alignment:
Q  174 atttaatccttgcaatttggg--cgtttaaaaattggtc-ctgtattcg-----ctttgtaaaatttaatcatttaaaatttcgttcctctttccactta 265  Q
    |||| |||||||||||| |||  |||||||||||||||| |||||||||     | ||| ||||||||||||||||||||||||||||| |  |||||||    
T  48528498 atttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgtcaatccttgcaaaatttaatcatttaaaatttcgttcctatccccactta 48528597  T
Q  266 atcactgttacgtcactgattagctgacgtggtagtctaactcaacaaa 314  Q
    |||||||| || |||||||||||||||||||  ||||||| ||||||||    
T  48528598 atcactgtcacatcactgattagctgacgtgacagtctaattcaacaaa 48528646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 48529918 - 48529855
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagc 289  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||  |||||||||||||||    
T  48529918 aaaatttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcactgattagc 48529855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 16605693 - 16605759
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||| ||||   ||||||||||||||  |||||||| ||||||||||||||    
T  16605693 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtgg 16605759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 14801826 - 14801893
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  14801826 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 14801893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 40387553 - 40387608
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcac 281  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||  |||||||    
T  40387553 aaaagttaatcatttaaaatttcgttcctcttctcacttaatcactgccacgtcac 40387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 11857978 - 11858039
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| |||||| || || |||| ||||||||||||||||| |||||||| ||||    
T  11857978 aaaatttaatcacttaaaaattggtccctcattccacttaatcactgtcacgtcactaatta 11858039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 53701902 - 53701971
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtggta 299  Q
    ||||||||||||||||||| | |||||  ||||||||||||||  |||||||| ||| | ||||||||||    
T  53701902 tttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaatttgatgacgtggta 53701971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 17356256 - 17356208
Alignment:
Q  234 atcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 17356208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 34765718 - 34765666
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  ||||||||    
T  34765718 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 34765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 52298112 - 52298168
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||  ||||||||    
T  52298112 aaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 52298168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 35028336 - 35028269
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||||  ||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  35028336 tttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtgg 35028269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 41583573 - 41583518
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcac 281  Q
    |||| |||||||||||||||||||| ||||||  |||||||||||||  |||||||    
T  41583573 aaaagttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtcac 41583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 43155835 - 43155792
Alignment:
Q  229 atttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||||| |||||  ||||||||||||||    
T  43155835 atttaatcatttaaaatttcgtccctctccccacttaatcactg 43155792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 50418975 - 50418932
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgt 273  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  50418975 tttaatcatttaaaatttcgtccctctccccacttaatcactgt 50418932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 13058127 - 13058169
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  13058127 tttaatcatttaaaatttcgtccctctccccacttaatcactg 13058169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 23613399 - 23613441
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  23613399 tttaatcatttaaaatttcgtccctctccccacttaatcactg 23613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 36009151 - 36009109
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  36009151 tttaatcatttaaaatttcgtccctctccccacttaatcactg 36009109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 44967376 - 44967334
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  44967376 tttaatcatttaaaatttcgtccctctccccacttaatcactg 44967334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 49879514 - 49879472
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  49879514 tttaatcatttaaaatttcgtccctctccccacttaatcactg 49879472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 56014816 - 56014882
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||| |||| |  || ||||||||||  |||||||||||| | ||||||||    
T  56014816 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcactgatttgatgacgtgg 56014882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 4983032 - 4982991
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  4983032 ttaatcatttaaaatttcgtccctctccccacttaatcactg 4982991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 9145072 - 9145031
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactg 9145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 24711201 - 24711242
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcact 271  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  24711201 tttaatcatttaaaatttcgtccctctccccacttaatcact 24711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 27934623 - 27934664
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatcactg 27934664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 42738337 - 42738296
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactg 42738296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 344
Target Start/End: Original strand, 48528694 - 48528727
Alignment:
Q  311 caaaatgacacaattacccttatatcttcatctc 344  Q
    |||||||||||| |||||||||||||||||||||    
T  48528694 caaaatgacacatttacccttatatcttcatctc 48528727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 32062671 - 32062699
Alignment:
Q  222 ttgtaaaatttaatcatttaaaatttcgt 250  Q
    |||||||||||||||||||||||||||||    
T  32062671 ttgtaaaatttaatcatttaaaatttcgt 32062699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 52298328 - 52298300
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcct 254  Q
    |||||||||||||||||||||||||||||    
T  52298328 aaaatttaatcatttaaaatttcgttcct 52298300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 34850407 - 34850317
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtggtagtctaactcaacaaaat 316  Q
    ||||||||||||||||||||||| | |||||  ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  34850407 aaaatttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactgattagctgacgtggcagtctaactcaacaaaat 34850317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 25065975 - 25065901
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||| |||||||||||| ||||||| ||||| |||||||||||||||  || ||||||||||||||||||||    
T  25065975 tgtaaaaattaatcatttaagatttcgtccctctctccacttaatcactgccacctcactgattagctgacgtgg 25065901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 4960630 - 4960697
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||| ||||||||||||||  |||||||| ||| | ||||||||    
T  4960630 tttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatgacgtgg 4960697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 22103848 - 22103787
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||  |||||||| ||||    
T  22103848 aaaatttaatcacttaaaatttcgtccctctctccacttaatcactgccacgtcactaatta 22103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 17662188 - 17662136
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||| ||||||||||||||  ||||||||    
T  17662188 tttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcact 17662136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 27999193 - 27999105
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtggtagtctaactcaacaaa 314  Q
    ||||||||||||||| |||||||||  ||||| ||||||||||||||  || ||||| ||| ||||| |||| ||| | ||||||||||    
T  27999193 aaaatttaatcattttaaatttcgtctctcttcccacttaatcactgccacctcactaatttgctgatgtggcagtgtgactcaacaaa 27999105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 14879061 - 14879128
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| | |||||| ||| | ||||||||    
T  14879061 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtgg 14879128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 34849097 - 34849160
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagc 289  Q
    ||||||||||||||||||||||||| |||||  || |||||||||||  ||||||| |||||||    
T  34849097 aaaatttaatcatttaaaatttcgtccctctcccctcttaatcactgccacgtcaccgattagc 34849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 43758912 - 43758979
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| ||||| |||||||||||||||  | |||||| ||| | ||||||||    
T  43758912 tttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtgg 43758979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 44523474 - 44523407
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||| | ||||  | |||||||||||||  |||||||| ||||||||||||||    
T  44523474 tttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaattagctgacgtgg 44523407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 6367652 - 6367718
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | |||||||    
T  6367652 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 6367718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 10304009 - 10304055
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||    
T  10304009 aaaatttaatcatttaaaatttcgtccctctccccacttaatcactg 10304055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 16970880 - 16970834
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatca 269  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||    
T  16970880 tgtaaaatttaatcatttaaaatttcgtccctctccccacttaatca 16970834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 13245936 - 13245997
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| ||||||||| || |||||  ||||||||||||||| |||||||| ||||    
T  13245936 aaaatttaatcacttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 13245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 1103551 - 1103603
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| | ||||||    
T  1103551 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcact 1103603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 9443658 - 9443730
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact-gattagctgacgtgg 297  Q
    |||||||||||||||||||||| || ||||   ||||||||||| ||| | |||||| |||||||||||||||    
T  9443658 aaaatttaatcatttaaaatttggtccctccccccacttaatcattgtcaagtcactagattagctgacgtgg 9443730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 40210708 - 40210656
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  ||||||||    
T  40210708 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 40210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 183530 - 183487
Alignment:
Q  229 atttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||||| |||||  ||||||||||||||    
T  183530 atttaatcatttaaaatttcgtccctctccccacttaatcactg 183487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 19017968 - 19017925
Alignment:
Q  229 atttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||| || |||||| ||||||||||||||    
T  19017968 atttaatcatttaaaattttgtccctcttcccacttaatcactg 19017925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 24009879 - 24009812
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  || ||||| ||| | ||||||||    
T  24009879 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtgg 24009812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 25647973 - 25648016
Alignment:
Q  229 atttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||||| |||||  ||||||||||||||    
T  25647973 atttaatcatttaaaatttcgtccctctccccacttaatcactg 25648016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 10304197 - 10304151
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||    
T  10304197 aaaatttaatcatttaaaatttcgtctctctccccacttaatcactg 10304151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 13914405 - 13914339
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    ||||||||||||||||||||| |||||  ||||| ||||||||  |||||||| ||| | |||||||    
T  13914405 tttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcactaatttgatgacgtg 13914339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 17661865 - 17661914
Alignment:
Q  174 atttaatccttgcaatttggg--cgtttaaaaattggtcctgtattcgct 221  Q
    |||| |||||||||||| |||  |||||||||||||||||||||||||||    
T  17661865 atttcatccttgcaattaggggtcgtttaaaaattggtcctgtattcgct 17661914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 37578529 - 37578463
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||  ||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  37578529 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtgg 37578463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 42248563 - 42248605
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  42248563 tttaatcatttaaaatttcgtccctctccccacttaatcactg 42248605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 21444680 - 21444741
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| |||||||||||| | |||  ||||||||||||||  |||||||| ||||    
T  21444680 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 21444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 24905473 - 24905432
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatcactg 24905432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 28011454 - 28011495
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28011495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 31514623 - 31514582
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  31514623 ttaatcatttaaaatttcgtccctctccccacttaatcactg 31514582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 33442900 - 33442859
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactg 33442859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 40772597 - 40772637
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcac 270  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  40772597 tttaatcatttaaaatttcgtccctctccccacttaatcac 40772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 25107304 - 25107387
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtggtagtctaactcaacaaa 314  Q
    |||||||||||||||||||| |||| |  || ||||||||||  |||||| ||||||||||||||||||||||||| |||||||    
T  25107304 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcagtgattagctgacgtggtagtctaacccaacaaa 25107387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 33156332 - 33156265
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| ||||   ||||||||||||||  |||||||| ||||||||||||||    
T  33156332 tttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtgg 33156265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 20704669 - 20704608
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| |||||||||||| |||||| |||||||||||| || |||||||| ||||    
T  20704669 aaaatttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaatta 20704608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 30380932 - 30380993
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||  |||||||| ||||    
T  30380932 aaaatttaatcatttaaaatttcgtccctctgtccacttgatcactgccacgtcactaatta 30380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 26463936 - 26463884
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  26463936 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 26463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 33689718 - 33689650
Alignment:
Q  229 atttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  33689718 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaattcgatgacgtgg 33689650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 9294296 - 9294229
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| | |||||| ||| | ||||||||    
T  9294296 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtgg 9294229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 21783837 - 21783783
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtca 280  Q
    ||||||||||||||||||||||||||||||   ||| ||||||||||| ||||||    
T  21783837 aaaatttaatcatttaaaatttcgttcctcagcccaattaatcactgtcacgtca 21783783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 25108432 - 25108366
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||| | || |  || ||||||||||  |||||||||||||||||||||||    
T  25108432 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgattagctgacgtgg 25108366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 42854515 - 42854565
Alignment:
Q  220 ctttgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||| |||||||||||||||||||||||||  |||| |||||||||||||||    
T  42854515 ctttgcaaaatttaatcatttaaaatttcgt--ctctctccacttaatcactg 42854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 40758234 - 40758301
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  |||||||||||||   |||||||| ||| | ||||||||    
T  40758234 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtgg 40758301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 43384373 - 43384440
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| | |||||| ||| | ||||||||    
T  43384373 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtgg 43384440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 44654845 - 44654790
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcac 281  Q
    |||||||||||| |||||||||||| |||||  ||| ||||||||||| |||||||    
T  44654845 aaaatttaatcacttaaaatttcgtccctctccccatttaatcactgtcacgtcac 44654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 51994224 - 51994173
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcac 281  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  51994224 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 2796269 - 2796311
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  2796269 tttaatcatttaaaatttcgtccctctccccacttaatcactg 2796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 23458317 - 23458275
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  23458317 tttaatcatttaaaatttcgtccctctccccacttaatcactg 23458275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 8041707 - 8041748
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactg 8041748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 10770797 - 10770756
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatcactg 10770756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 29192118 - 29192167
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||| |||||||||||||||||||| |||||| ||  ||||||||||    
T  29192118 tgtaaaaattaatcatttaaaatttcgtccctcttcccgattaatcactg 29192167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 32717122 - 32717073
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||| |||||||||||||||||||| |||||| ||| ||||| ||||    
T  32717122 tgtaaaaattaatcatttaaaatttcgtccctcttcccaattaattactg 32717073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 36314604 - 36314563
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36314563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 48322683 - 48322642
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatcactg 48322642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 54466514 - 54466555
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactg 54466555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 45915825 - 45915751
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||| |||||||||||||||| ||| |||||||||  ||||||||||  |||||||||||||||||||||||    
T  45915825 tgtaaaaattaatcatttaaaattccgtccctctttccgattaatcactgccacgtcactgattagctgacgtgg 45915751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 5457245 - 5457178
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||  |||||||||||||||||||||||    
T  5457245 tttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagctgacgtgg 5457178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 23181332 - 23181265
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| | |||||| ||| | ||||||||    
T  23181332 tttaatcatttaaaatttcgtccctctctccacttaatcactgtcatgtcactaatttgatgacgtgg 23181265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 32053481 - 32053429
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  32053481 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 32053429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 10935884 - 10935951
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| ||||| |||||||||||||||  | |||||| ||| | ||||||||    
T  10935884 tttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtgg 10935951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 11397464 - 11397531
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgac 293  Q
    |||||||||||||||||||||| ||  ||| | ||| ||||||||||| |||||||| ||||||||||    
T  11397464 aaaatttaatcatttaaaatttagtctctcatcccaattaatcactgtcacgtcactaattagctgac 11397531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 2640516 - 2640449
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| | |||||| ||| | ||||||||    
T  2640516 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtgg 2640449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 6253561 - 6253600
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatca 269  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  6253561 tttaatcatttaaaatttcgtccctctctccacttaatca 6253600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 20426668 - 20426601
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||| || |||| | ||||| || |||||  ||||||| |||||||||||||||    
T  20426668 tttaatcatttaaaatttagtccctcatcccactaaaccactgccacgtcaccgattagctgacgtgg 20426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 28469346 - 28469279
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  |||||||||||||   |||||||| ||| | ||||||||    
T  28469346 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtgg 28469279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 38643633 - 38643692
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||| |||||||||||| ||||||| |||||  ||||||||| ||||| ||||||||    
T  38643633 tgtaaaaattaatcatttaagatttcgtccctctccccacttaattactgtcacgtcact 38643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 40379859 - 40379926
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||| ||  |||||||| ||| | ||||||||    
T  40379859 tttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaatttgatgacgtgg 40379926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 3914228 - 3914270
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||| | ||||||||||||    
T  3914228 tttaatcatttaaaatttcgtccctcttccaacttaatcactg 3914270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 17102110 - 17102152
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  17102110 tttaatcatttaaaatttcgtccctctccccacttaatcactg 17102152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 27396933 - 27396891
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  27396933 tttaatcatttaaaatttcgtccctctccccacttaatcactg 27396891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 27991829 - 27991871
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  27991829 tttaatcatttaaaatttcgtccctctccccacttaatcactg 27991871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 42731509 - 42731551
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  42731509 tttaatcatttaaaatttcgtccctctccccacttaatcactg 42731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 4227189 - 4227140
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||| |||| ||||||||||||||| |||||||||  ||||||||||    
T  4227189 tgtaaaaattaaccatttaaaatttcgtccctctttccggttaatcactg 4227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 12644150 - 12644101
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||| |||||||||||||||||||| |||||| ||  ||||||||||    
T  12644150 tgtaaaaattaatcatttaaaatttcgtccctcttcccggttaatcactg 12644101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 30948466 - 30948425
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactg 30948425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 32680901 - 32680860
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatcactg 32680860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 45914607 - 45914656
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||| |||||||||||||||||||| |||||| ||  ||||||||||    
T  45914607 tgtaaaaattaatcatttaaaatttcgtccctcttcccgattaatcactg 45914656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 47558113 - 47558170
Alignment:
Q  223 tgtaaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtca 280  Q
    ||||||| |||| ||||||||||||||| |||||| ||  ||||||||||| ||||||    
T  47558113 tgtaaaaattaaccatttaaaatttcgtccctcttcccgattaatcactgtcacgtca 47558170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 31873241 - 31873170
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| ||| ||||| ||| | ||||||||    
T  31873241 aaaatttaatcatttaaaattttgttcctcttcccacttaatcactgctacatcactaatttgatgacgtgg 31873170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 4405998 - 4405946
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  4405998 tttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcact 4405946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 2693859 - 2693785
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact-gattagctgacgtggta 299  Q
    |||||||||||||||||||||| ||| |||   ||||||||||||||| |||||||| |||||| ||||||||||    
T  2693859 aaaatttaatcatttaaaatttggttactccccccacttaatcactgtcacgtcactagattagatgacgtggta 2693785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 16388864 - 16388797
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  16388864 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 16388797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 12273191 - 12273149
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  12273191 tttaatcatttaaaatttcgtccctcttcccacttaatcactg 12273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 36928566 - 36928632
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | |||||||    
T  36928566 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 36928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 30712054 - 30711973
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtggtagtctaactcaaca 312  Q
    |||||||||||||||||||| |||    ||| ||||| ||||  || |||||||||||||||||||| ||||| ||||||||    
T  30712054 ttaatcatttaaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggcagtctgactcaaca 30711973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 30719831 - 30719750
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtggtagtctaactcaaca 312  Q
    |||||||||||||||||||| |||    ||| ||||| ||||  || |||||||||||||||||||| ||||| ||||||||    
T  30719831 ttaatcatttaaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggcagtctgactcaaca 30719750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 23698582 - 23698539
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgt 273  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  23698582 tttaatcatttaaaatttcgtccctctccccacttaatcactgt 23698539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 35756672 - 35756739
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  | |||||| ||| | ||||||||    
T  35756672 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtgg 35756739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 1425360 - 1425318
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  1425360 tttaatcatttaaaatttcgtccctctccccacttaatcactg 1425318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 20385659 - 20385725
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||| |||    ||| ||||| ||||  |||||||||||||||||||||||    
T  20385659 ttaatcatttaaaatttcgtccctgagcccagttaattactgccacgtcactgattagctgacgtgg 20385725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 23663852 - 23663810
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  23663852 tttaatcatttaaaatttcgtccctctccccacttaatcactg 23663810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 30710946 - 30711012
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||||| |||    ||| ||||| ||||| |||||||||||||| ||||||||    
T  30710946 ttaatcatttaaaatttcgtccctgagcccagttaattactgtcacgtcactgattagttgacgtgg 30711012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 31608849 - 31608799
Alignment:
Q  232 taatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||| |||||  ||||||||||||||  ||||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 31608799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 38862708 - 38862750
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  38862708 tttaatcatttaaaatttcgtccctctccccacttaatcactg 38862750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 39071766 - 39071808
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  39071766 tttaatcatttaaaatttcgtccctctccccacttaatcactg 39071808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 3041762 - 3041721
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactg 3041721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 22890336 - 22890275
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    ||||| |||||| ||||||||| || |||||| ||||||||||||||| || ||||| ||||    
T  22890336 aaaatctaatcacttaaaattttgtccctcttcccacttaatcactgtcacatcactaatta 22890275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 24085860 - 24085921
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||  ||||||||| || |||||  ||||||||||||||| |||||||| ||||    
T  24085860 aaaatttaatcgcttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 24085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 36325325 - 36325366
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36325366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 38845605 - 38845564
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactg 38845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 40775956 - 40775915
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactg 40775915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 44407163 - 44407122
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatcactg 44407122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 13186150 - 13186202
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    |||||||||||||||||||||  ||||  ||||||||||||||  ||||||||    
T  13186150 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 13186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 10840562 - 10840624
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattag 288  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||| |||||||| |||||    
T  10840562 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtcactaattag 10840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 36755183 - 36755249
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||| ||| | |||||||    
T  36755183 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatttgatgacgtg 36755249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 37895685 - 37895619
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | |||||||    
T  37895685 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 37895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 11721432 - 11721371
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| ||||||||||||  ||||  ||||||||||||||| |||||||| ||||    
T  11721432 aaaatttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatta 11721371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 15848178 - 15848230
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  ||||||||    
T  15848178 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 15848230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 11349548 - 11349477
Alignment:
Q  225 taaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    |||||||||||||||||||||||||| ||||   ||| ||||||| ||  |||||  |||||||||||||||    
T  11349548 taaaatttaatcatttaaaatttcgtccctcaacccagttaatcagtgccacgtctttgattagctgacgtg 11349477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 17266484 - 17266531
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgt 273  Q
    |||||||||||||||||||||| || |||||  |||||||||||||||    
T  17266484 aaaatttaatcatttaaaatttggtccctctccccacttaatcactgt 17266531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 25893556 - 25893489
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||| |||||| ||||  || |||||||||||  ||||| || ||||||||||||||    
T  25893556 tttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattagctgacgtgg 25893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 36382251 - 36382318
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||| | |||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  36382251 tttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 36382318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 39423605 - 39423672
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  | |||||| ||| | ||||||||    
T  39423605 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtgg 39423672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 6657968 - 6658010
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  6657968 tttaatcatttaaaatttcgtccctctccccacttaatcactg 6658010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 6846870 - 6846916
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||| |||||||||||||||||| |||||| ||||||||| ||||    
T  6846870 aaaattgaatcatttaaaatttcgtccctcttcccacttaattactg 6846916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 11163361 - 11163319
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  11163361 tttaatcatttaaaatttcgtccctctccccacttaatcactg 11163319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 16099145 - 16099187
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  16099145 tttaatcatttaaaatttcgtccctctccccacttaatcactg 16099187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 21370495 - 21370457
Alignment:
Q  275 acgtcactgattagctgacgtggtagtctaactcaacaa 313  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  21370495 acgtcactgattagctgacgtggtagtgtgactcaacaa 21370457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 39498400 - 39498442
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  39498400 tttaatcatttaaaatttcgtccctctccccacttaatcactg 39498442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 44714099 - 44714057
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  44714099 tttaatcatttaaaatttcgtccctctccccacttaatcactg 44714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 11689627 - 11689688
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| |||||||||||| | |||  ||||||||||||||  |||||||| ||||    
T  11689627 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 11689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 14900789 - 14900748
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatcactg 14900748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 33739794 - 33739835
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactg 33739835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 14608 - 14536
Alignment:
Q  225 taaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||| |||||||||||| ||||||| |||||  ||||||||||||||  || ||||||||||||||||||||    
T  14608 taaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactgattagctgacgtgg 14536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 33517624 - 33517691
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  |||||||||||||| ||||||||| ||| | ||||||||    
T  33517624 tttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcactaatttgatgacgtgg 33517691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 26463269 - 26463326
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||  |||||||||||||    
T  26463269 tttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgatta 26463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 21628051 - 21627984
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    |||||||||||||||||| || |||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  21628051 tttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 21627984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 12080726 - 12080768
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  12080726 tttaatcatttaaaatttcgtccctctccccacttaatcactg 12080768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 30803951 - 30803993
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  30803951 tttaatcatttaaaatttcgtccctctccccacttaatcactg 30803993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 1215208 - 1215147
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgatta 287  Q
    |||||||||||| |||||||||||| ||| |  ||||||||||||||  |||||||| ||||    
T  1215208 aaaatttaatcacttaaaatttcgtccctatccccacttaatcactgccacgtcactaatta 1215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 28000691 - 28000650
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28000650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 28498363 - 28498298
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgt 295  Q
    |||||||||||||||||| || |||    ||| ||||||||||  |||||||||||||||||||||    
T  28498363 tttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 28498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 29810774 - 29810709
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgt 295  Q
    |||||||||||||||||| || |||    ||| ||||||||||  |||||||||||||||||||||    
T  29810774 tttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 29810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 30337540 - 30337581
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatcactg 30337581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 33647052 - 33647120
Alignment:
Q  229 atttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||||  ||||  ||| ||||||||||  |||||||| ||| | ||||||||    
T  33647052 atttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatttgatgacgtgg 33647120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 37901 - 37834
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | ||||||||    
T  37901 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 37834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 13962954 - 13963021
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||   |||||||||||||| |||||||| ||| | ||||||||    
T  13962954 tttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaatttgatgacgtgg 13963021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 14194761 - 14194694
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  |||||||||||||| || |||||| ||| | ||||||||    
T  14194761 tttaatcatttaaaatttcgtccctctccccacttaatcactgctatgtcactaatttgatgacgtgg 14194694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 5024356 - 5024314
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||||||||||  ||||||||||||||    
T  5024356 tttaatcatttaaaatttcgttcctctccccacttaatcactg 5024314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 29646700 - 29646634
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| | |||||| ||| | |||||||    
T  29646700 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtg 29646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 32242332 - 32242398
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtg 296  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | |||||||    
T  32242332 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 32242398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 12904840 - 12904896
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact 282  Q
    |||||||||| |||||||||||||| |||||  ||||||||||| ||| ||||||||    
T  12904840 aaaatttaataatttaaaatttcgtccctctccccacttaatcaatgtcacgtcact 12904896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 14849049 - 14848977
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact-gattagctgacgtgg 297  Q
    |||||||||||||||||||||| || ||||   ||||||||||||||  || ||||| |||||||||||||||    
T  14849049 aaaatttaatcatttaaaatttggtccctcaccccacttaatcactgccacatcactagattagctgacgtgg 14848977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 8322494 - 8322537
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgt 273  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  8322494 tttaatcatttaaaatttcgtccctctccccacttaatcactgt 8322537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 35920522 - 35920479
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgt 273  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  35920522 tttaatcatttaaaatttcgtccctctccccacttaatcactgt 35920479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 39453390 - 39453457
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtgg 297  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  | |||||| ||| | ||||||||    
T  39453390 tttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcactaatttgatgacgtgg 39453457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 3529180 - 3529138
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  3529180 tttaatcatttaaaatttcgtccctctccccacttaatcactg 3529138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 5993979 - 5994021
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  5993979 tttaatcatttaaaatttcgtccctctccccacttaatcactg 5994021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 28269726 - 28269684
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  28269726 tttaatcatttaaaatttcgtccctctccccacttaatcactg 28269684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 28771176 - 28771134
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  28771176 tttaatcatttaaaatttcgtccctctccccacttaatcactg 28771134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 35512238 - 35512280
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  35512238 tttaatcatttaaaatttcgtccctctccccacttaatcactg 35512280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 38442158 - 38442200
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  38442158 tttaatcatttaaaatttcgtccctctccccacttaatcactg 38442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 38475337 - 38475295
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  38475337 tttaatcatttaaaatttcgtccctctccccacttaatcactg 38475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 297320 - 297279
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactg 297279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 6758171 - 6758130
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatcactg 6758130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 31482708 - 31482667
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactg 31482667  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 41930607 - 41930648
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatcactg 41930648  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 69055 - 69120
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgt 295  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  |||||||| ||| | ||||||    
T  69055 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgt 69120  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 239889 - 239816
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcactgattagctgacgtggtagtct 303  Q
    ||||||||||||||||||||| |||    ||||||||| ||||  || |||||||||||||||||||| |||||    
T  239889 tttaatcatttaaaatttcgtccctacacccacttaattactgccacatcactgattagctgacgtggcagtct 239816  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 14132 - 14061
Alignment:
Q  226 aaaatttaatcatttaaaatttcgttcctctttccacttaatcactgttacgtcact-gattagctgacgtgg 297  Q
    |||||||||||||||||||||| || ||||   ||||||||||| ||| |||||||| |||||||||||||||    
T  14132 aaaatttaatcatttaaaatttggtccctc-ccccacttaatcattgtcacgtcactagattagctgacgtgg 14061  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 1859 - 1901
Alignment:
Q  230 tttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  1859 tttaatcatttaaaatttcgtccctctccccacttaatcactg 1901  T

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Target: scaffold0559 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 1324 - 1365
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1365  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 141900 - 141859
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatcactg 141859  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 139763 - 139804
Alignment:
Q  231 ttaatcatttaaaatttcgttcctctttccacttaatcactg 272  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  139763 ttaatcatttaaaatttcgtccctctccccacttaatcactg 139804  T

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