View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19413_low_6 (Length: 454)
Name: NF19413_low_6
Description: NF19413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19413_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 9 - 436
Target Start/End: Original strand, 37489009 - 37489437
Alignment:
| Q |
9 |
agcagagaagaggatcaacagagagaagatcatgatgatcatcatgttctccatcagccatctggtggataaagtcaacgtaatcatcataggaagacaa |
108 |
Q |
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| T |
37489009 |
agcagagaagaggatcaacagagagaagatcatgatgatcatcatgttctccatcagccatctggtggataaagtcaacgtaatcatcataggaagacaa |
37489108 |
T |
|
| Q |
109 |
aggaacaagacttgtgaaagtagcaggatcaacacttttgttattattcaaagattgaagatatctaacagaaccattatgttgaaggattgatcgaaga |
208 |
Q |
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| T |
37489109 |
aggaacaagacttgtgaaagtagcaggatcaacacttttgttattattcaaagattgaagatatctaacagaaccattatgttgaaggattgatcgaaga |
37489208 |
T |
|
| Q |
209 |
gtttccaactggtgatgttttgcatccattgtcaactcttctagcttctgcataagttcatcgtctgtcatcattggatagg--atatagaacagttctg |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
37489209 |
gtttccaactggtgatgttttgcatccattgtcaactcttctagcttctgcataagttcatcgtctgtcatcattggataggatatatagaacagttcta |
37489308 |
T |
|
| Q |
307 |
gttaatattgttgttcttgtttgtttgattgttgtactatatatgtgtttcactttcaagatcacaacataaactctttgttggtggtatcatcaagaaa |
406 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37489309 |
gttaatattgttgttc-tgtttgtttgattgttgtactatatatgtgtttcactttcaagatcacaacataaactctttgttggtggtatcatcaagaaa |
37489407 |
T |
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| Q |
407 |
gattctttgccttttgggattatcaactct |
436 |
Q |
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| T |
37489408 |
gattctttgccttttgggattatcaactct |
37489437 |
T |
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