View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19415_high_11 (Length: 318)
Name: NF19415_high_11
Description: NF19415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19415_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 306
Target Start/End: Original strand, 422986 - 423284
Alignment:
| Q |
11 |
aatgaaaatggaaatagagacaa---gttaatatagatatatgaaactaaccaattcttagaatcgtcaacatttgcaagaaaggaacccaatttgtctt |
107 |
Q |
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| T |
422986 |
aatgaaaatggaaatagagacaacaagttaatatagatatatgaaactaaccaattcttagaatcatcaacatttgcaagaaaggaacccaatttgtctt |
423085 |
T |
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| Q |
108 |
ccctttctttcttcttaatcttcttccccttgatgtcatatccaatatggggttcatcctcataccacttcaaagggacctctccaatggtattccgagg |
207 |
Q |
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| T |
423086 |
ccctttctttcttcttaatcttcttccccttgatgtcatatccaatatggggttcatcctcataccacttcaaagggacctctccaatggtattccgagg |
423185 |
T |
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| Q |
208 |
agccacctacggaaaaaggaaacgcagagcaatcaaattcaagtccatagtaatataaaagggaattgattacaacaaataattataatgatgatgatg |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
423186 |
agccacctacggaaaaaggaaacgcagagcaatcaaattcaagtccatagtaatataaatgggaattgattacaacaaataattataatgatgatgatg |
423284 |
T |
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