View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19416_high_14 (Length: 250)
Name: NF19416_high_14
Description: NF19416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19416_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 20024936 - 20025172
Alignment:
| Q |
1 |
cctcaaatgaagttactcgaagctgtggaccaaatgggttatgctgcaacatcatgatcaacagattcaaagcagattttctgactattgcactcttgtc |
100 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20024936 |
cctcaaatgaagttactcggagctgtggaccaaatgggttatgctgcaacatcatgatcaacagattcaaagcagattttctgactattgcactcttgtc |
20025035 |
T |
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| Q |
101 |
ctccagtctcccagcagcaacttccgcaacctcgttccacaaaccaatcgaaactgagtgttcctcacataactccccccacacctgaagcacacgactc |
200 |
Q |
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||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
20025036 |
ctccaatctcccagcagcaatttccgcaacctcgttccacaaaccaatcgaaactgagtgttcctcgcataactccccccacacctgaagcacacgactc |
20025135 |
T |
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| Q |
201 |
cttgtgtaagcagaaacatccctacatctctcaagta |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
20025136 |
cttgtgtaagcagaaacatccctacatctctcaagta |
20025172 |
T |
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