View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19416_low_11 (Length: 318)

Name: NF19416_low_11
Description: NF19416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19416_low_11
NF19416_low_11
[»] chr1 (25 HSPs)
chr1 (98-303)||(36522918-36523130)
chr1 (1-93)||(3559795-3559887)
chr1 (1-93)||(37821629-37821721)
chr1 (1-92)||(40215166-40215257)
chr1 (4-94)||(20304924-20305014)
chr1 (1-94)||(44094875-44094968)
chr1 (1-94)||(51737683-51737776)
chr1 (1-93)||(25973585-25973677)
chr1 (1-96)||(19015582-19015677)
chr1 (1-94)||(18404626-18404719)
chr1 (1-94)||(36966502-36966595)
chr1 (1-94)||(41876236-41876329)
chr1 (1-93)||(9910086-9910178)
chr1 (17-93)||(19722894-19722970)
chr1 (1-93)||(25463854-25463946)
chr1 (1-93)||(6883665-6883757)
chr1 (3-94)||(33786425-33786516)
chr1 (3-93)||(32000061-32000151)
chr1 (3-96)||(40273888-40273981)
chr1 (1-91)||(44690818-44690909)
chr1 (1-94)||(10167577-10167671)
chr1 (1-94)||(27523049-27523143)
chr1 (17-100)||(33786623-33786706)
chr1 (32-97)||(52064368-52064434)
chr1 (17-89)||(40273706-40273779)
[»] chr7 (22 HSPs)
chr7 (1-95)||(35445575-35445669)
chr7 (1-99)||(45637889-45637987)
chr7 (1-93)||(34483016-34483108)
chr7 (1-94)||(15577641-15577734)
chr7 (1-93)||(24395149-24395241)
chr7 (1-94)||(3962156-3962249)
chr7 (1-91)||(4974532-4974622)
chr7 (1-95)||(42611989-42612083)
chr7 (1-95)||(48880720-48880814)
chr7 (1-94)||(15329452-15329545)
chr7 (9-93)||(25167651-25167735)
chr7 (1-93)||(30848747-30848839)
chr7 (1-93)||(35876422-35876514)
chr7 (1-99)||(42696261-42696360)
chr7 (1-84)||(29737322-29737406)
chr7 (3-96)||(15238564-15238657)
chr7 (3-92)||(37476876-37476965)
chr7 (1-91)||(20009895-20009986)
chr7 (3-94)||(18037157-18037248)
chr7 (30-93)||(36790271-36790335)
chr7 (17-81)||(15329285-15329350)
chr7 (17-81)||(48880915-48880980)
[»] chr6 (18 HSPs)
chr6 (1-94)||(23290875-23290968)
chr6 (1-94)||(32702383-32702476)
chr6 (1-94)||(28675326-28675419)
chr6 (1-94)||(17705263-17705355)
chr6 (1-94)||(33696875-33696968)
chr6 (1-93)||(17175816-17175908)
chr6 (1-93)||(33695121-33695213)
chr6 (1-93)||(18365369-18365461)
chr6 (1-93)||(18370633-18370725)
chr6 (1-93)||(2309218-2309310)
chr6 (1-82)||(6031546-6031627)
chr6 (3-100)||(11548377-11548474)
chr6 (2-94)||(29693624-29693717)
chr6 (1-62)||(18889470-18889531)
chr6 (30-92)||(34238883-34238945)
chr6 (15-93)||(582522-582602)
chr6 (1-52)||(6127455-6127506)
chr6 (44-93)||(2121004-2121054)
[»] chr8 (36 HSPs)
chr8 (1-99)||(26041902-26042000)
chr8 (1-97)||(38017110-38017207)
chr8 (1-93)||(6108028-6108120)
chr8 (1-96)||(1503635-1503730)
chr8 (1-96)||(40779921-40780016)
chr8 (1-95)||(32064924-32065018)
chr8 (1-95)||(37985849-37985943)
chr8 (1-93)||(3596836-3596928)
chr8 (1-93)||(10044526-10044618)
chr8 (1-93)||(17841645-17841737)
chr8 (1-93)||(25581034-25581126)
chr8 (1-92)||(14129037-14129128)
chr8 (1-96)||(15187738-15187833)
chr8 (1-91)||(20091598-20091688)
chr8 (1-91)||(24211169-24211259)
chr8 (1-91)||(34665559-34665649)
chr8 (1-94)||(1645758-1645851)
chr8 (1-93)||(30055694-30055786)
chr8 (1-93)||(42754837-42754929)
chr8 (5-94)||(31347570-31347659)
chr8 (1-82)||(39772608-39772689)
chr8 (1-91)||(37132477-37132568)
chr8 (1-81)||(32394035-32394114)
chr8 (1-81)||(35353219-35353299)
chr8 (1-90)||(3890412-3890502)
chr8 (1-62)||(41819594-41819655)
chr8 (3-94)||(7022159-7022250)
chr8 (1-68)||(8454011-8454078)
chr8 (13-95)||(30834848-30834931)
chr8 (3-94)||(7017652-7017743)
chr8 (17-81)||(15187572-15187637)
chr8 (45-93)||(24844655-24844704)
chr8 (1-53)||(27835288-27835340)
chr8 (44-81)||(1886634-1886672)
chr8 (17-81)||(7021990-7022055)
chr8 (17-89)||(41819766-41819839)
[»] chr4 (32 HSPs)
chr4 (3-101)||(10442574-10442672)
chr4 (1-95)||(21802113-21802207)
chr4 (1-95)||(7744905-7744999)
chr4 (1-91)||(24128417-24128507)
chr4 (1-99)||(49387676-49387774)
chr4 (1-94)||(2625015-2625108)
chr4 (1-94)||(22199437-22199530)
chr4 (1-94)||(46442022-46442115)
chr4 (1-98)||(50156369-50156465)
chr4 (1-93)||(36073527-36073619)
chr4 (1-101)||(44893000-44893100)
chr4 (1-94)||(53123209-53123302)
chr4 (1-93)||(44893604-44893696)
chr4 (2-94)||(47290245-47290337)
chr4 (1-91)||(9089048-9089138)
chr4 (1-94)||(36073129-36073222)
chr4 (1-93)||(33530479-33530571)
chr4 (1-91)||(17655608-17655699)
chr4 (1-94)||(4751625-4751718)
chr4 (1-94)||(31078613-31078706)
chr4 (1-94)||(37934735-37934829)
chr4 (1-94)||(11314045-11314139)
chr4 (1-83)||(23964269-23964351)
chr4 (1-93)||(42671846-42671939)
chr4 (1-99)||(44744610-44744705)
chr4 (1-94)||(37219809-37219903)
chr4 (1-93)||(36073256-36073349)
chr4 (1-62)||(30563387-30563448)
chr4 (3-91)||(24392854-24392942)
chr4 (44-93)||(25063369-25063419)
chr4 (17-81)||(33530676-33530741)
chr4 (53-93)||(53998979-53999020)
[»] chr5 (21 HSPs)
chr5 (1-93)||(8145551-8145643)
chr5 (1-95)||(4892380-4892474)
chr5 (1-95)||(37321586-37321680)
chr5 (1-97)||(3521798-3521894)
chr5 (1-93)||(33584124-33584216)
chr5 (1-96)||(14138845-14138940)
chr5 (1-94)||(25398416-25398509)
chr5 (1-93)||(6043307-6043399)
chr5 (1-92)||(3362957-3363048)
chr5 (1-90)||(12850980-12851069)
chr5 (1-98)||(2477814-2477911)
chr5 (1-95)||(12614530-12614625)
chr5 (3-93)||(22912852-22912942)
chr5 (1-93)||(38899520-38899613)
chr5 (3-96)||(17545474-17545567)
chr5 (1-72)||(11360947-11361018)
chr5 (1-51)||(4433845-4433895)
chr5 (17-93)||(27482017-27482095)
chr5 (17-81)||(12614721-12614786)
chr5 (1-56)||(13664737-13664792)
chr5 (17-89)||(8145379-8145452)
[»] chr3 (32 HSPs)
chr3 (1-93)||(19650695-19650787)
chr3 (1-94)||(3137208-3137301)
chr3 (1-94)||(3456242-3456335)
chr3 (1-94)||(6042055-6042148)
chr3 (1-94)||(22426139-22426232)
chr3 (1-94)||(33113972-33114065)
chr3 (1-94)||(34482682-34482775)
chr3 (1-94)||(37216847-37216940)
chr3 (1-93)||(3574321-3574413)
chr3 (1-93)||(30385578-30385670)
chr3 (1-92)||(8320378-8320469)
chr3 (1-91)||(33145890-33145980)
chr3 (1-94)||(48161084-48161177)
chr3 (1-93)||(3089597-3089689)
chr3 (1-94)||(36864826-36864920)
chr3 (1-93)||(47738289-47738382)
chr3 (1-93)||(2754897-2754989)
chr3 (1-93)||(37522231-37522323)
chr3 (3-94)||(40328011-40328103)
chr3 (1-93)||(26612924-26613017)
chr3 (3-94)||(8361833-8361924)
chr3 (1-81)||(33839713-33839794)
chr3 (3-93)||(9796824-9796914)
chr3 (1-93)||(24343727-24343820)
chr3 (3-95)||(41224414-41224506)
chr3 (1-92)||(46919072-46919164)
chr3 (1-91)||(42921303-42921394)
chr3 (17-81)||(47738117-47738182)
chr3 (1-53)||(42298040-42298092)
chr3 (4-78)||(41883031-41883106)
chr3 (17-81)||(6041896-6041961)
chr3 (17-89)||(9797017-9797090)
[»] chr2 (25 HSPs)
chr2 (1-93)||(7475303-7475395)
chr2 (1-93)||(9293370-9293462)
chr2 (1-93)||(10662066-10662158)
chr2 (1-89)||(3989254-3989342)
chr2 (1-93)||(33380385-33380477)
chr2 (1-93)||(35160937-35161029)
chr2 (1-94)||(13355026-13355119)
chr2 (1-93)||(23267857-23267949)
chr2 (1-90)||(31174633-31174722)
chr2 (3-95)||(43331092-43331184)
chr2 (1-94)||(22592888-22592984)
chr2 (3-93)||(9723586-9723677)
chr2 (3-91)||(21393483-21393570)
chr2 (1-62)||(16767288-16767349)
chr2 (48-93)||(39819272-39819317)
chr2 (3-72)||(37335824-37335894)
chr2 (17-89)||(13354850-13354923)
chr2 (1-62)||(21936260-21936321)
chr2 (3-54)||(34320991-34321042)
chr2 (17-81)||(14941354-14941419)
chr2 (17-81)||(27847644-27847709)
chr2 (17-81)||(21936093-21936158)
chr2 (17-89)||(31174822-31174895)
chr2 (1-53)||(14941199-14941251)
chr2 (54-101)||(27847791-27847839)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-100)||(41188-41287)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-91)||(13020-13110)
[»] scaffold0228 (2 HSPs)
scaffold0228 (1-94)||(26114-26207)
scaffold0228 (1-94)||(16162-16255)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-93)||(4574-4666)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-93)||(11799-11891)
scaffold0178 (17-81)||(11633-11698)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-93)||(48027-48119)


Alignment Details
Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 98 - 303
Target Start/End: Complemental strand, 36523130 - 36522918
Alignment:
Q  98 aaatcatgtataattaaactttttaacagagtttaattgtgatgtactagcagtgtaaagacatgttacacagtcgactaataatatcatgtcacactat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  36523130 aaatcatgtataattaaactttttaacagagtttaattgtgatgtactagcagtgtaaagacatgttacacagtcgactaataatattatgccacactat 36523031  T
Q  198 ccggagcggatgtattcatgcctaagcggtggcca-------cacaaagagagagagaaattactgaataagtatatgtattttttcatttagctacctt 290  Q
    | |||||||||| ||||||||||||||||||||||       | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  36523030 caggagcggatgcattcatgcctaagcggtggccatggctaccccaaagagagagagaaattactgaataagtagatgtattttttcatttagctaccat 36522931  T
Q  291 aagagtatatagt 303  Q
    || ||||||||||    
T  36522930 aacagtatatagt 36522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3559795 - 3559887
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  3559795 ttaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37821721 - 37821629
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  37821721 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40215166 - 40215257
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttc 92  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40215166 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 20305014 - 20304924
Alignment:
Q  4 ataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20305014 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 20304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44094875 - 44094968
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  44094875 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttcct 44094968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 51737683 - 51737776
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  51737683 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 51737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25973585 - 25973677
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25973585 ttaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19015582 - 19015677
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||||| || |||||||||||    
T  19015582 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttcctaa 19015677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18404626 - 18404719
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||| || ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  18404626 ttaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcct 18404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36966595 - 36966502
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| | |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  36966595 ttaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttcct 36966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 41876329 - 41876236
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| |||||||||  || |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  41876329 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 41876236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9910178 - 9910086
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||| || ||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9910178 ttaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25463854 - 25463946
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||||| |||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  25463854 ttaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6883665 - 6883757
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| | |||| || ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  6883665 ttaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 33786516 - 33786425
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 33786425  T

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Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 40273888 - 40273981
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||| ||||||   ||||||||||||||||||| |||||| ||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttttctaa 40273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44690909 - 44690818
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 91  Q
    ||||||||| |||||| ||||||| ||| |||||| || ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  44690909 ttaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10167577 - 10167671
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaat-ctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||| |||||||||||||||||| |||||||| |||||| |||||| |||  ||| |||||||||||||||| |||| ||||||||||||    
T  10167577 ttaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttcct 10167671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 27523143 - 27523049
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||| ||||| ||||| || ||| |||| | || ||||  ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcct 27523049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 33786623 - 33786706
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaaa 100  Q
    |||| ||| ||| ||||||||| ||| |||||||||||||||||||   ||||||||||||||||||| ||||| || ||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcatttcccaaaaaaa 33786706  T

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Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 52064434 - 52064368
Alignment:
Q  32 tattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcctaaa 97  Q
    |||| |||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttcttaaa 52064368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 89  Q
    |||||||| ||| |||||| || ||| |||||||||||| |||||| | |||||| ||||||||||||| ||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35445575 - 35445669
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  35445575 ttaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttccta 35445669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45637889 - 45637987
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  45637889 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcctaaaaa 45637987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34483016 - 34483108
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34483016 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15577734 - 15577641
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15577734 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 15577641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 24395149 - 24395241
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  24395149 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3962156 - 3962249
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| || |||||||||||||||||||||||||||| |||||||||    
T  3962156 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttcct 3962249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4974622 - 4974532
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4974622 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42611989 - 42612083
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    ||||||||| |||||||||||||||||| ||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  42611989 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttccta 42612083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 48880814 - 48880720
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    ||||||||||| ||||||||||||| || ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  48880814 ttaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccta 48880720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15329452 - 15329545
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||| || ||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15329452 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttcct 15329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  9 tgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 30848747 - 30848839
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  30848747 ttaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35876422 - 35876514
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||| ||  || |||||||||||||||||||||||||||| ||||||||    
T  35876422 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttcc 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42696261 - 42696360
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcctaaaaa 99  Q
    |||||||||||||||||||||||| ||| ||||||||  ||| |||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcctaaaaa 42696360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 29737322 - 29737406
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatcta 84  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| | |||||| |||||||||| ||||||||||||||||||||||    
T  29737322 ttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 15238564 - 15238657
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    |||||||||||||||||||||| | | ||||||||||||| |||||||| ||| ||| ||   ||||||||||||||||||| |||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcctaa 15238657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttc 92  Q
    |||||||||||||||||||||| ||| ||||||||| ||| ||||| || ||||||||||   ||||||||||||||||||| |||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20009986 - 20009895
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 91  Q
    ||||||||||||||| ||||||||   | ||||||||||||| |||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  20009986 ttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 18037157 - 18037248
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||| ||||||||||||| ||| ||||||||  ||| |||||||| ||||||||||   |||||||| |||||||||| |||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcct 18037248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 36790335 - 36790271
Alignment:
Q  30 attattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||| |||||||||||||||| || |||||| |||| ||||||| || ||||||||    
T  36790335 attattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 23290968 - 23290875
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  23290968 ttaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttcct 23290875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32702383 - 32702476
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  32702383 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 32702476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 28675326 - 28675419
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28675326 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 28675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17705355 - 17705263
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17705355 ttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 17705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33696875 - 33696968
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  33696875 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcct 33696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17175908 - 17175816
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17175908 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33695213 - 33695121
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  33695213 ttaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18365461 - 18365369
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| |||||||||  || ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  18365461 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18370725 - 18370633
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| |||||||||  || ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  18370725 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2309310 - 2309218
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  2309310 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6031627 - 6031546
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatc 82  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||    
T  6031627 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 11548474 - 11548377
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaaa 100  Q
    |||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||| |||||   ||||||||||||||||||| |||||| || |||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttttcttaaaaa 11548377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 29693624 - 29693717
Alignment:
Q  2 taataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    |||||||| |||||||||||||| ||| |||||| || ||| |||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  29693624 taataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattttcct 29693717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18889531 - 18889470
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt 62  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||    
T  18889531 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 34238945 - 34238883
Alignment:
Q  30 attattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttc 92  Q
    ||||||||||||| |||||||||||||||  | |||||||||||||||||||||| |||||||    
T  34238945 attattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  15 tgaaatctaaaggtaattattgtgtc-atatcattcttgaatctttctta-taaaatcattcttgatatctaacattttcc 93  Q
    |||||||||| ||| |||||| || | ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6127455 - 6127506
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttg 52  Q
    ||||||||||||||||||||||||| || ||||||||| ||| |||||||||    
T  6127455 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 2121054 - 2121004
Alignment:
Q  44 tcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  2121054 tcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26042000 - 26041902
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  26042000 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctaaaaa 26041902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 38017110 - 38017207
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaa-ttattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaa 97  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  38017110 ttaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttttctaaa 38017207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6108120 - 6108028
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  6108120 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1503730 - 1503635
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctaa 1503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40780016 - 40779921
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  40780016 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctaa 40779921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32064924 - 32065018
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  32064924 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccta 32065018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 37985943 - 37985849
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37985943 ttaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccta 37985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3596928 - 3596836
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  3596928 ttaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10044526 - 10044618
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10044526 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17841737 - 17841645
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  17841737 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25581126 - 25581034
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25581126 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14129037 - 14129128
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttc 92  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14129037 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15187738 - 15187833
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    |||||||||||||||||||||||||||| |||||||||  || ||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  15187738 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctaa 15187833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20091688 - 20091598
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20091688 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

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Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24211259 - 24211169
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24211259 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

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Target: chr8; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34665559 - 34665649
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34665559 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

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Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1645851 - 1645758
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  1645851 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttcct 1645758  T

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Target: chr8; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 30055694 - 30055786
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  30055694 ttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 30055786  T

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Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 42754929 - 42754837
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||  ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  42754929 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 42754837  T

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Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 31347659 - 31347570
Alignment:
Q  5 taaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 31347570  T

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Target: chr8; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39772689 - 39772608
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatc 82  Q
    |||||||| || |||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  39772689 ttaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

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Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37132568 - 37132477
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 91  Q
    ||||||||| |||||||||||||| ||| ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  37132568 ttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

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Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32394035 - 32394114
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatat 81  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| ||| |||||||||||||||||||||    
T  32394035 ttaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

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Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35353219 - 35353299
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatat 81  Q
    ||||||||||||| | |||| ||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  35353219 ttaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattt 90  Q
    ||||||||| ||| | |||||||| ||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt 62  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 7022159 - 7022250
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||| ||  ||||||||| | | |||||||||||||||||||   |||||||| |||||||||| |||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcct 7022250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8454011 - 8454078
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaa 68  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||  |||||||||||    
T  8454011 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 30834931 - 30834848
Alignment:
Q  13 actgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||| |||  ||||| |||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttccta 30834848  T

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Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 7017743 - 7017652
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||| | | |||||| |   || |||||||| ||| ||||||   ||||||||||||||||||| |||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcct 7017652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 15187637 - 15187572
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 15187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 24844704 - 24844655
Alignment:
Q  45 cattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  24844704 cattcttaaatctttcttgataaaatcattattgatatctaacattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27835340 - 27835288
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttga 53  Q
    ||||||||||||| |||||||||| | | ||||||||||||||||||| ||||    
T  27835340 ttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 1886634 - 1886672
Alignment:
Q  44 tcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1886634 tcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 41819766 - 41819839
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 89  Q
    |||||||| ||| |||||| || |||||||||||| || | ||||| |||||||| |||||||||| |||||||    
T  41819766 aaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacatt 41819839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 10442672 - 10442574
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaaat 101  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  10442672 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctaacaaat 10442574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21802207 - 21802113
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21802207 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccta 21802113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7744999 - 7744905
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    ||||||||||||| |||||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7744999 ttaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 7744905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24128417 - 24128507
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  24128417 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 49387774 - 49387676
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  49387774 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttccttaaaa 49387676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2625015 - 2625108
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| |||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2625015 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttcct 2625108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22199437 - 22199530
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  22199437 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 22199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 46442022 - 46442115
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  46442022 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 46442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 50156465 - 50156369
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaa 98  Q
    |||||||||||||||||||||||| ||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50156465 ttaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcctaaaa 50156369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36073527 - 36073619
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  36073527 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44893100 - 44893000
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaaa 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||    
T  44893100 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcctaataaa 44893001  T
Q  101 t 101  Q
    |    
T  44893000 t 44893000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 53123209 - 53123302
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||| | ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  53123209 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 53123302  T

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Target: chr4; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44893604 - 44893696
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  44893604 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893696  T

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Target: chr4; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 47290245 - 47290337
Alignment:
Q  2 taataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  47290245 taataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 47290337  T

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Target: chr4; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9089048 - 9089138
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||||||| | ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  9089048 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

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Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36073129 - 36073222
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||||||  |||||||| ||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  36073129 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttcct 36073222  T

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Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33530571 - 33530479
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||| |||||||||||||||||| ||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  33530571 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttcc 33530479  T

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Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17655608 - 17655699
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 91  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  17655608 ttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

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Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4751625 - 4751718
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||||||  |||||||| ||| |||||||| ||| ||||||||||||| |||||||||||||| |||||||||    
T  4751625 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcct 4751718  T

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Target: chr4; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 31078706 - 31078613
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||| |||||||||||| | ||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  31078706 ttaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttcct 31078613  T

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Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37934829 - 37934735
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||| || | |||||||||||||||||    
T  37934829 ttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcct 37934735  T

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Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11314139 - 11314045
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||| |||||  ||||||| ||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  11314139 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T

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Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23964351 - 23964269
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatct 83  Q
    ||||||||||||| |||||||||||| | |||||| || ||| |||||||| |||||||||||||||||||||||||||||||    
T  23964351 ttaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

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Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42671846 - 42671939
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    |||| |||||||||| ||||||||   | |||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42671846 ttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

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Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44744610 - 44744705
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaa 99  Q
    ||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||||||   | ||||||||||| |||||||||||||||||| ||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttcttaaaaa 44744705  T

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Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37219809 - 37219903
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||| ||| |||||||||| | | |||||| || ||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  37219809 ttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacattttcct 37219903  T

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Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||| ||||||||||||||  ||||||||| || |||||||||||| |||||||||| ||||||||||| ||  |||||| ||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30563387 - 30563448
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt 62  Q
    ||||||||| ||||||||||||||  || ||||||||||||| |||||||||||||||||||    
T  30563387 ttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||| | | |||||||||  || |||||||| ||| ||||||   ||||||||||||||||||| ||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 25063419 - 25063369
Alignment:
Q  44 tcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  25063419 tcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| || ||| |||||||||||| |||||| |||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 53999020 - 53998979
Alignment:
Q  53 aatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  53999020 aatctttcttgataaaatcattcttgatatctaatattttcc 53998979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8145551 - 8145643
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8145551 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4892380 - 4892474
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  4892380 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccta 4892474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 37321680 - 37321586
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  37321680 ttaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttccta 37321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3521894 - 3521798
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaa 97  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  3521894 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcctaaa 3521798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33584216 - 33584124
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33584216 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14138845 - 14138940
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    ||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  14138845 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcctaa 14138940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25398416 - 25398509
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||| |||||||||||||||||||||||||||| |||||||||    
T  25398416 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttcct 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6043399 - 6043307
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  6043399 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3362957 - 3363048
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttc 92  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  3362957 ttaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12850980 - 12851069
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattt 90  Q
    ||||||||||||||||||||||||||||  |||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  12850980 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2477814 - 2477911
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaa 98  Q
    ||||||||| |||||||||||||||||| || |||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||| ||||    
T  2477814 ttaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttccaaaaa 2477911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12614625 - 12614530
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||| || |||||||||| ||||||||||| ||||||||||    
T  12614625 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcattttccta 12614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

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Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 38899613 - 38899520
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaa-tctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||||||||||||||||||  |||||||| ||| ||||||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  38899613 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 17545567 - 17545474
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaa 96  Q
    |||||||||||||||||||||| | | ||||||||||||| |||||||| ||| ||| ||   ||||||||||||||||||| |||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcctaa 17545474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11361018 - 11360947
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcat 72  Q
    ||||||||| ||| |||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||    
T  11361018 ttaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4433895 - 4433845
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattctt 51  Q
    ||||||||| |||||||||||||||||| ||||||||| ||| ||||||||    
T  4433895 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 27482017 - 27482095
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattc-ttgatatctaacattttcc 93  Q
    |||||||||||| |||||| ||| || |||||||||||||||| || |||||||||||| || |||||||| |||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctttaatatctaatattttcc 27482095  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| |||||| ||||||||||||||||||| |||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13664737 - 13664792
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatc 56  Q
    ||||||||| |||||||||||||| ||| |||||| | |||| |||||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 8145452 - 8145379
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 89  Q
    |||||||| ||| |||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19650787 - 19650695
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19650787 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 19650695  T

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Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3137301 - 3137208
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3137301 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 3137208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3456242 - 3456335
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3456242 ttaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 3456335  T

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Target: chr3; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6042055 - 6042148
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  6042055 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 6042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22426232 - 22426139
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22426232 ttaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 22426139  T

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Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33113972 - 33114065
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33113972 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 33114065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34482775 - 34482682
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  34482775 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 34482682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37216940 - 37216847
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37216940 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 37216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3574413 - 3574321
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  3574413 ttaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 30385578 - 30385670
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||||||    
T  30385578 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8320469 - 8320378
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttc 92  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  8320469 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33145890 - 33145980
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33145890 ttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 48161084 - 48161177
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||||||| || |||||| || |||||||||||||||||||||||||||| |||||||||    
T  48161084 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttcct 48161177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3089597 - 3089689
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  3089597 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36864920 - 36864826
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcct 36864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47738289 - 47738382
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47738289 ttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2754897 - 2754989
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||| ||||||| ||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  2754897 ttaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37522231 - 37522323
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| |||||| || ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  37522231 ttaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 40328011 - 40328103
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    ||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcct 40328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26612924 - 26613017
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  26612924 ttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacattttcc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 8361924 - 8361833
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||   ||||||||||||||||||| |||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 8361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33839713 - 33839794
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  33839713 ttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||||||||||||||||  || ||||||||| ||| |||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 24343727 - 24343820
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    ||||||||| |||||||||||||| ||| |||||  | |||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  24343727 ttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttcc 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 41224414 - 41224506
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    ||||||||||| |||||| ||| ||| ||||||||| ||| |||||||||||| ||||||   ||||||||||||||||||| ||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttccta 41224506  T

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Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 46919072 - 46919164
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttc 92  Q
    ||||||||| |||| |||||||| |||| |||||| || ||| ||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  46919072 ttaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 42921303 - 42921394
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||| ||| ||| ||| ||||| ||| |||||||| ||| |||||| |||||||||||||| ||||||| ||||||    
T  42921303 ttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    ||||||||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42298040 - 42298092
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttga 53  Q
    |||||||||||||||||||||||| |||  |||||||||||| ||||||||||    
T  42298040 ttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 41883106 - 41883031
Alignment:
Q  4 ataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttga 78  Q
    |||||| ||||||||||| |||| | |||||| |  ||| ||||||||||||||||||| ||||||||||| ||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 9797017 - 9797090
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 89  Q
    |||||||| ||| |||||| || ||| |||||||||||| |||||| | |||||| |||||||||| |||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacatt 9797090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7475395 - 7475303
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  7475395 ttaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9293462 - 9293370
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9293462 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10662066 - 10662158
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  10662066 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3989254 - 3989342
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatt 89  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  3989254 ttaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33380385 - 33380477
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33380385 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35160937 - 35161029
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  35160937 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13355026 - 13355119
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||||||||||||||||||| || ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  13355026 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 13355119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23267949 - 23267857
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  23267949 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31174722 - 31174633
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattt 90  Q
    ||||||||||||| |||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  31174722 ttaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 43331092 - 43331184
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttccta 95  Q
    |||||||||||||||||||||||||| ||||||||  ||| |||||||||||||||||||   ||||||||||||||||||| ||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccta 43331184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22592888 - 22592984
Alignment:
Q  1 ttaataaatgagactgaaa--tctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 94  Q
    ||||||||| |||||||||  ||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  22592888 ttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcct 22592984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 93  Q
    ||||||| |||||||||||||||||| |||||| |||||| |||||||| ||| |||||| || ||||||||||||||||||||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||| ||| ||| ||||||||||||| |||||||||||| ||||||   ||||||||||||||||||| ||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16767349 - 16767288
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt 62  Q
    ||||||||||||||||||||||||  || ||||||||||||| |||||||||||||||||||    
T  16767349 ttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  48 tcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcat 72  Q
    |||||||||||||||||||||| ||| |||| |||||||| ||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 13354923 - 13354850
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 89  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacatt 13354850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21936260 - 21936321
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttctt 62  Q
    ||||||||||| |||||||||||||||| ||||||||| ||| ||||||||| ||| |||||    
T  21936260 ttaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  3 aataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaa 54  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| || ||| ||||||||||||||||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| |||||| ||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 21936158 - 21936093
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 31174822 - 31174895
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 89  Q
    |||||||| ||| |||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacatt 31174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14941251 - 14941199
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttga 53  Q
    ||||||||| ||| |||||||||| | | ||||||||||||| ||||||||||    
T  14941251 ttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 27847791 - 27847839
Alignment:
Q  54 atctttctt-ataaaatcattcttgatatctaacattttcctaaaaaat 101  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcattttccttaaaaat 27847839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41188 - 41287
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcctaaaaaa 100  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  41188 ttaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttccaaaaaaa 41287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13020 - 13110
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacatttt 91  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  13020 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26114 - 26207
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  26114 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 26207  T

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Target: scaffold0228; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16162 - 16255
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 94  Q
    |||||||||||||||||||||||||| | ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  16162 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 16255  T

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Target: scaffold0204 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4574 - 4666
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  4574 ttaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 4666  T

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Target: scaffold0178 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 11799 - 11891
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  11799 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 11891  T

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Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  17 aaatctaaaggtaattattgtgtcatatcattcttgaatctttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

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Target: scaffold0085 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48027 - 48119
Alignment:
Q  1 ttaataaatgagactgaaatctaaaggtaattattgtgtcatatcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 93  Q
    |||||||||||||||||||||||||| | |||||||||  || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48027 ttaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 48119  T

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