View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19418_low_30 (Length: 294)
Name: NF19418_low_30
Description: NF19418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19418_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 36828703 - 36828975
Alignment:
| Q |
15 |
aagacaggagaactggttttactcaaaaccgaaaagctaggtataaatgtgtaagagtagactctaagacagaactcacagttcacgcagagtata-atg |
113 |
Q |
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| T |
36828703 |
aagacaggagaactggttttactcaaaatcgaaaagctaggtataattgtgtaagagtagactctaagacagaactcacagttcacgcagagtattgatg |
36828802 |
T |
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| Q |
114 |
gagaatcaaacaaaccagagtcatgtttgaggggatgaggcattcttcatgttaacgatacttcactcacctttttatctttggattatttagatcagac |
213 |
Q |
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||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
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| T |
36828803 |
gagaaccaaacaagccagagtcatgtttgaggggatgaggcattcttcatgttaacgatacttcactcacctttttatctctagattatttagatcagac |
36828902 |
T |
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| Q |
214 |
accacaagaattgca--------------ttaataaatagtaaataactcaagttgggcaattctatatacac |
272 |
Q |
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| T |
36828903 |
accacaagaattgcattaataataaccctttaataaatagtaaataactcaagttgggcaattctatatacac |
36828975 |
T |
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