View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19418_low_38 (Length: 244)
Name: NF19418_low_38
Description: NF19418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19418_low_38 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 50080413 - 50080633
Alignment:
| Q |
8 |
atattaaaaagcattaatacaaatacttgaacaaaatatcatcacgaatcccttctttctcaaattgtcgtcagtagcaataacaatatgtatcactttc |
107 |
Q |
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| T |
50080413 |
atattaaaaaacattaatacaaatacttgaacaaaatatcatgacgaatcccttctttctcaaattgtcgtcagtagcaataacaatatgaatcactttc |
50080512 |
T |
|
| Q |
108 |
cagataatcggagttttagatggaccagaagaggcacaactaaaataagtatctatctttaaaagataggaaaccgatgtagaagtttccaaaaccaaaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50080513 |
cagataatcggagttttagatggaccagaagaggcacaactaaaataagtatctatctttaaaagataggaaaccgatgtagaagtttccaaaaccaaaa |
50080612 |
T |
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| Q |
208 |
catcatgaacatataagataa |
228 |
Q |
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||||||||||||||||||||| |
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| T |
50080613 |
catcatgaacatataagataa |
50080633 |
T |
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