View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19418_low_42 (Length: 233)
Name: NF19418_low_42
Description: NF19418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19418_low_42 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 30757225 - 30757027
Alignment:
| Q |
17 |
acatatacaattgaggaacattggttagccataatgagcgccacacatatgttttagagctggtttctcattaaactgaagcagaaggtgatgaaacttc |
116 |
Q |
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| T |
30757225 |
acatatacaattgaggaacattggttagccataatgagcgccacacatatgttttagagctggtttctcattaaactgaagcagaaggtgatgaaacttc |
30757126 |
T |
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| Q |
117 |
ttttatttttgttgtttctaaaagtcgaaagaagaaaaataatcgcgaagcatatccaaccccgctcaaagggttcacgttcaccatcatctattcgcc |
215 |
Q |
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| T |
30757125 |
ttttatttttgttgtttctaaaagtcgaaagaagaaaaataatcgcgaagcatatccaaccccgctcaaagggttcacgttcaccatcatctattcgcc |
30757027 |
T |
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