View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1941_low_10 (Length: 229)
Name: NF1941_low_10
Description: NF1941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1941_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 25012611 - 25012798
Alignment:
| Q |
19 |
atgaaccaataaccaatgtattgaatctgcatttgagtttggatatatgctcccatccttcatttaaggaaggaatcaaaataggccaaagcctgaaatt |
118 |
Q |
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| T |
25012611 |
atgaaccaataaccaatgtattgaatctgcatttgagtttggatatatgctcccatccttcatttaaggaaggaatcaaaataggccaaagcctgaaatt |
25012710 |
T |
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| Q |
119 |
aattcaaattcatatagttagctagagttattatataattaaattgcacaaaattaattaaaggattatatcacataacacatagacttacct |
211 |
Q |
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| T |
25012711 |
aattcaaattcacatagttagctagag---ttatataattaaattgcacaaaattaattaaaggatcatatcacata--acatagacttacct |
25012798 |
T |
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