View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19424_low_1 (Length: 731)
Name: NF19424_low_1
Description: NF19424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19424_low_1 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 433; Significance: 0; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 251 - 712
Target Start/End: Original strand, 2448975 - 2449436
Alignment:
| Q |
251 |
gatattatgctaagttatataannnnnnngaagattatattaagatggtaattgtatatttactactataggttggggagaggggagtacaaatgtcagg |
350 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2448975 |
gatattatgctaagttatataattgttttgaagattatattaagatggtaattgtatatttactactataggttggggagaggggagtacaaatgtcagg |
2449074 |
T |
|
| Q |
351 |
gggacaaaagcaaaggatttccattgcaagagccataatcaaaaatccaagaattctattgctagacgaagcaacaagtgcactagattttgaatccgaa |
450 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2449075 |
gggacaaaagcaaaggatttccattgcaagagccataatcaaaaatccaagaattctattgctagacgaagcaacaagtgcactagattttgaatccgaa |
2449174 |
T |
|
| Q |
451 |
caagttgtccaagaagcttttgagaaagccacagttgaacgcaccaccattatcatcgctcaccgcttatccaccatcagaactgcagatatcattgcaa |
550 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2449175 |
cgagttgtccaagaagcttttgagaaagccacagttgaacgcaccaccattatcatcgctcaccgcttatccaccatcagaactgcagatatcattgcaa |
2449274 |
T |
|
| Q |
551 |
tcgttaaaaatggtaagatcgtggaaacaggatctcacgaaagccttatgcaaaatgacagctctctttacacctccctcgttcgtcttcaacaaactag |
650 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2449275 |
tcgttcaaaatggtaagatcgtggaaacaggatctcacgaaagccttatgcaaaatgacagctctctttacacctccctcgttcgtcttcaacaaactag |
2449374 |
T |
|
| Q |
651 |
aaatgaccaaagtgaccacactccacctatcatgaatagagatcacatccaaaacacgtgta |
712 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2449375 |
aaatgaccaaagtgaccacactccacctatcatgaatagagatcacatccaaaacacgtgta |
2449436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 266
Target Start/End: Original strand, 2448703 - 2448958
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2448703 |
agattcttcttgatggagttgctattcataagttgcaacttaagtggcttaggtcacaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
2448802 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2448803 |
cattaaggagaatatactttttggaagagaggatgctacatatgaagatgttgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
2448902 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagtgctagcttcttttgatattatgctaagtt |
266 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2448903 |
ccacaaggatatgatactcaggttagtgctagcttcttttgatattatgctaagtt |
2448958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 2620111 - 2620338
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2620111 |
agattcttcttgatggagttgctattcataagttgcaacttaagtggcttaggtcacaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
2620210 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2620211 |
cattaaggagaatatactttttggaagagaggatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
2620310 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagtg |
238 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
2620311 |
ccacaaggatatgatactcaggttagtg |
2620338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 2572637 - 2572407
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2572637 |
agattcttcttgatggagttgctattcataagttgcaacttaagtggcttaggtcacaaatgggtttagtgagtcaagaacctgctttgtttgcaacaag |
2572538 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2572537 |
cattaaggagaatatactttttggaagagaggatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
2572438 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagtgcta |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2572437 |
ccacaaggatatgatactcaggttagtgcta |
2572407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 292 - 698
Target Start/End: Complemental strand, 2571784 - 2571378
Alignment:
| Q |
292 |
aagatggtaattgtatatttactactataggttggggagaggggagtacaaatgtcagggggacaaaagcaaaggatttccattgcaagagccataatca |
391 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||||||||||| || | |
|
|
| T |
2571784 |
aagatgttaattgtatgtttactactacaggttggggagaggggagttcaaatgtcagggggacaaaagcaaagaattgcaattgcaagagccatcataa |
2571685 |
T |
|
| Q |
392 |
aaaatccaagaattctattgctagacgaagcaacaagtgcactagattttgaatccgaacaagttgtccaagaagcttttgagaaagccacagttgaacg |
491 |
Q |
| |
|
||| |||| |||||||||| |||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||| | || ||||| |||||| ||| |
|
|
| T |
2571684 |
aaatgccaaaaattctattgttagacgaagcaacaagtgcactcgattctgaatccgaacgagtcgtccaagaagctctagacaaagctgcagttggacg |
2571585 |
T |
|
| Q |
492 |
caccaccattatcatcgctcaccgcttatccaccatcagaactgcagatatcattgcaatcgttaaaaatggtaagatcgtggaaacaggatctcacgaa |
591 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||| || |||||| || ||||| ||||| |||||||| | || |||||| ||||||||||| |
|
|
| T |
2571584 |
aaccaccatcatcatcgctcaccgcttatctaccatccaaaatgcagacattattgcggtcgttcaaaatggtctggtcatggaaatgggatctcacgat |
2571485 |
T |
|
| Q |
592 |
agccttatgcaaaatgacagctctctttacacctccctcgttcgtcttcaacaaactagaaatgaccaaagtgaccacactccacctatcatgaatagag |
691 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
2571484 |
agcctcatgcaaaatgacaattctctttacacatcccttgttcgtctccaacaaactagaaatgaccaaagtgatgacactccatctatcatgaatagag |
2571385 |
T |
|
| Q |
692 |
atcacat |
698 |
Q |
| |
|
||||||| |
|
|
| T |
2571384 |
atcacat |
2571378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 2432836 - 2433063
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2432836 |
agattcttcttgatggagttgctattcataagttgcaacttaagtggcttaggtcacaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
2432935 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
2432936 |
cattaaggagaatatactttttggaagagaggatgctacatatgaagaaattgtggatgctgccaaagcttccaatgctcataatttcatatcaatgttg |
2433035 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagtg |
238 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
2433036 |
ccacaaggatatgatactcaggttagtg |
2433063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 309 - 708
Target Start/End: Complemental strand, 2675258 - 2674859
Alignment:
| Q |
309 |
tttactactataggttggggagaggggagtacaaatgtcagggggacaaaagcaaaggatttccattgcaagagccataatcaaaaatccaagaattcta |
408 |
Q |
| |
|
|||| ||||| ||||||||||||| ||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||| |||| || | |||| || |
|
|
| T |
2675258 |
tttattactacaggttggggagagaggagttcagatgtcagggggacaaaaacaaaggattgccattgcaagagccataataaaaatgcctaaaatttta |
2675159 |
T |
|
| Q |
409 |
ttgctagacgaagcaacaagtgcactagattttgaatccgaacaagttgtccaagaagcttttgagaaagccacagttgaacgcaccaccattatcatcg |
508 |
Q |
| |
|
|| ||||| ||||||||||||||||| |||| ||||||||||| |||||| ||||||||| | || ||||| | |||| |||||||||||| ||||||| |
|
|
| T |
2675158 |
ttactagatgaagcaacaagtgcacttgattctgaatccgaacgagttgttcaagaagctctagacaaagcggcggttggacgcaccaccatcatcatcg |
2675059 |
T |
|
| Q |
509 |
ctcaccgcttatccaccatcagaactgcagatatcattgcaatcgttaaaaatggtaagatcgtggaaacaggatctcacgaaagccttatgcaaaatga |
608 |
Q |
| |
|
||||||||||||| |||||| || |||||| ||||||||| | || |||||||||||||| ||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
2675058 |
ctcaccgcttatcaaccatccaaaatgcagacatcattgcagttgtccaaaatggtaagatcatggaaacgggatctcacgaaagcctcatgcaaaatga |
2674959 |
T |
|
| Q |
609 |
cagctctctttacacctccctcgttcgtcttcaacaaactagaaatgaccaaagtgaccacactccacctatcatgaatagagatcacatccaaaacacg |
708 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
2674958 |
aaattctctttacacctccctcgttcgtctccaacaaactagaaatgatcaaactgatgacactccatctatcatgaatagaggtcacatgcaaaacacg |
2674859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 2677473 - 2677246
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2677473 |
agattcttcttgatggagttgctattcataagttgcaacttaagtggcttaggtcacaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
2677374 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
2677373 |
cattatggagaatatactttttggaagagaggatgctacatatgaagaaatcgtggatgctgctaaagcttctaatgctcataatttcatttcaatgttg |
2677274 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagtg |
238 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
2677273 |
ccacaaggatatgatactcaggttagtg |
2677246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 2600215 - 2599989
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2600215 |
agattcttcttgatggagttgctattcataagttgcaacttaagtggcttaggtcacaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
2600116 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
2600115 |
cattaaggagaatatactttttggaagagaggatgctacatatgaagaaattgtgaatgctgctaaaacttctaatgctcataatttcatttcattgttg |
2600016 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagt |
237 |
Q |
| |
|
||||||| ||||||||||||||||||| |
|
|
| T |
2600015 |
ccacaagtatatgatactcaggttagt |
2599989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 308 - 706
Target Start/End: Original strand, 2621250 - 2621648
Alignment:
| Q |
308 |
atttactactataggttggggagaggggagtacaaatgtcagggggacaaaagcaaaggatttccattgcaagagccataatcaaaaatccaagaattct |
407 |
Q |
| |
|
|||||||||| ||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| || || |||| |||| |||||| |
|
|
| T |
2621250 |
atttactactgcaggttggggagagaggagttcaaatgtctggggggcaaaagcaaaggatttccattgcaagagctatcataaaaatgccaaaaattct |
2621349 |
T |
|
| Q |
408 |
attgctagacgaagcaacaagtgcactagattttgaatccgaacaagttgtccaagaagcttttgagaaagccacagttgaacgcaccaccattatcatc |
507 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| || |||||||| |||| |||||||||||| |||||| |
|
|
| T |
2621350 |
tttgctagatgaagcaacaagtgcactagattctgaatccgaaagagttgtccaagaagctttagacaaagccaccgttggacgcaccaccatcatcatc |
2621449 |
T |
|
| Q |
508 |
gctcaccgcttatccaccatcagaactgcagatatcattgcaatcgttaaaaatggtaagatcgtggaaacaggatctcacgaaagccttatgcaaaatg |
607 |
Q |
| |
|
|||||||||||||||||||| || |||||| |||||||| | ||| ||||||||| ||||| ||||||||||||||| |||||||| |||||||||| |
|
|
| T |
2621450 |
gctcaccgcttatccaccattcaaaatgcagacatcattgcggttgttcaaaatggtatgatcgcggaaacaggatctcatgaaagcctcatgcaaaatg |
2621549 |
T |
|
| Q |
608 |
acagctctctttacacctccctcgttcgtcttcaacaaactagaaatgaccaaagtgaccacactccacctatcatgaatagagatcacatccaaaaca |
706 |
Q |
| |
|
||| ||||||||| ||||||| |||||||| || ||||| | ||| ||||||| || |||| ||| |||||||||||||||||||||| ||||||| |
|
|
| T |
2621550 |
acaattctctttacgcctcccttgttcgtctccagcaaacaaaaaaggaccaaaccgatgacaccccatctatcatgaatagagatcacatgcaaaaca |
2621648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 2645035 - 2644802
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2645035 |
agattcttcttgatggagttgccattcataagttgcaacttcagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
2644936 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2644935 |
cattaaggagaatatactttttggaagagaggatgctacatatgaagatgttgtagatgctgctaaagtttccaatgctcataatttcatttcattgttg |
2644836 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagtgctagct |
244 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |
|
|
| T |
2644835 |
ccacaaggatatgatacgcaggttagtgctagct |
2644802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 292 - 660
Target Start/End: Original strand, 2435837 - 2436205
Alignment:
| Q |
292 |
aagatggtaattgtatatttactactataggttggggagaggggagtacaaatgtcagggggacaaaagcaaaggatttccattgcaagagccataatca |
391 |
Q |
| |
|
|||||| ||||||||| ||| ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| | | |
|
|
| T |
2435837 |
aagatgttaattgtatgcttattactacaggttggggagaggggaattcaaatgtctgggggacaaaagcaaaggattgccattgcaagagccatagtaa |
2435936 |
T |
|
| Q |
392 |
aaaatccaagaattctattgctagacgaagcaacaagtgcactagattttgaatccgaacaagttgtccaagaagcttttgagaaagccacagttgaacg |
491 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||| || |||| |||||| |||| |||||||||||||||| | || ||||| ||||| ||| |
|
|
| T |
2435937 |
aaatgccaaaaattctattgctagacgaagcaacaagtgctctcgattctgaatctgaacgagttgtccaagaagctctagacaaagctgtagttggacg |
2436036 |
T |
|
| Q |
492 |
caccaccattatcatcgctcaccgcttatccaccatcagaactgcagatatcattgcaatcgttaaaaatggtaagatcgtggaaacaggatctcacgaa |
591 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| || |||||| ||||||||| | ||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
2436037 |
caccaccatcatcatcgctcaccgcttatccaccatccaaaatgcagacatcattgcagttgttcaaaatggtaagatcatggaaacaggatctcacgaa |
2436136 |
T |
|
| Q |
592 |
agccttatgcaaaatgacagctctctttacacctccctcgttcgtcttcaacaaactagaaatgaccaa |
660 |
Q |
| |
|
||||| |||||||||||||| || ||||||| ||||| |||| ||| ||||| || | |||||||||| |
|
|
| T |
2436137 |
agcctcatgcaaaatgacagttccatttacacatccctagttcatctccaacacaccaaaaatgaccaa |
2436205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 2586421 - 2586648
Alignment:
| Q |
11 |
agattattcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaag |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2586421 |
agattcttcttgatggagttgctattcataagttgcaacttaagtggcttaggtcacaaatgggtttagtgagtcaagaacctgctttgtttgcaacaag |
2586520 |
T |
|
| Q |
111 |
tattaaggagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttg |
210 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
2586521 |
catcaaggagaatatactttttggaagagaggatgctacatttgaagatgttgtggatgctgctaaagcttctaatgctcataatttcatttcaatgttg |
2586620 |
T |
|
| Q |
211 |
ccacaaggatatgatactcaggttagtg |
238 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
2586621 |
ccacaaggatatgatactcaggttagtg |
2586648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 309 - 708
Target Start/End: Original strand, 2589684 - 2590083
Alignment:
| Q |
309 |
tttactactataggttggggagaggggagtacaaatgtcagggggacaaaagcaaaggatttccattgcaagagccataatcaaaaatccaagaattcta |
408 |
Q |
| |
|
|||||||||| ||||| | ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| || || |||| |||| ||||||| |
|
|
| T |
2589684 |
tttactactacaggttagagagagaggagtacaaatgtcaggggggcaaaagcaaaggattgccattgcaagagctatcataaaaatgccaaaaattcta |
2589783 |
T |
|
| Q |
409 |
ttgctagacgaagcaacaagtgcactagattttgaatccgaacaagttgtccaagaagcttttgagaaagccacagttgaacgcaccaccattatcatcg |
508 |
Q |
| |
|
|||||||| ||||||||||||||||| |||| |||||| ||| ||||||||||||||| | || ||||| || |||| |||||||||||| ||||||| |
|
|
| T |
2589784 |
ttgctagatgaagcaacaagtgcactcgattctgaatcagaaagggttgtccaagaagctctagacaaagctaccgttggacgcaccaccatcatcatcg |
2589883 |
T |
|
| Q |
509 |
ctcaccgcttatccaccatcagaactgcagatatcattgcaatcgttaaaaatggtaagatcgtggaaacaggatctcacgaaagccttatgcaaaatga |
608 |
Q |
| |
|
|||||||| |||| |||||| || |||||| ||||||||| | ||| ||||||||||||| |||||| |||||||||||||||||| ||||| |||| |
|
|
| T |
2589884 |
ctcaccgcctatctaccatccaaaatgcagacatcattgcagttgttcaaaatggtaagattatggaaataggatctcacgaaagcctcgtgcaagatga |
2589983 |
T |
|
| Q |
609 |
cagctctctttacacctccctcgttcgtcttcaacaaactagaaatgaccaaagtgaccacactccacctatcatgaatagagatcacatccaaaacacg |
708 |
Q |
| |
|
|| || |||| ||||||| ||||||||||||||||| | || ||| ||| |||| |||| ||| |||||||||||| ||||||||| ||||||||| |
|
|
| T |
2589984 |
caattcaatttatgcctcccttgttcgtcttcaacaaacaaaaagggacgaaactgacgacaccccatctatcatgaataaagatcacatgcaaaacacg |
2590083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 299 - 708
Target Start/End: Complemental strand, 2643419 - 2643010
Alignment:
| Q |
299 |
taattgtatatttactactataggttggggagaggggagtacaaatgtcagggggacaaaagcaaaggatttccattgcaagagccataatcaaaaatcc |
398 |
Q |
| |
|
|||||| || |||||||||| ||||||||||||| ||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||| |||| || |
|
|
| T |
2643419 |
taattgcatgtttactactacaggttggggagagaggagttcaaatgtcaggggggcaaaaacaaaggattgccattgcaagagccataataaaaatgcc |
2643320 |
T |
|
| Q |
399 |
aagaattctattgctagacgaagcaacaagtgcactagattttgaatccgaacaagttgtccaagaagcttttgagaaagccacagttgaacgcaccacc |
498 |
Q |
| |
|
| |||| ||||| | |||||||| ||||||||||| |||| ||||||||||| | |||||||||| ||| | || |||| | |||||| |||||| ||| |
|
|
| T |
2643319 |
taaaattttattgttggacgaagcgacaagtgcacttgattctgaatccgaacgaattgtccaagacgctctagacaaagtcgcagttggacgcacaacc |
2643220 |
T |
|
| Q |
499 |
attatcatcgctcaccgcttatccaccatcagaactgcagatatcattgcaatcgttaaaaatggtaagatcgtggaaacaggatctcacgaaagcctta |
598 |
Q |
| |
|
|| ||||||||||| ||| ||||||||||| || ||| || ||||||||| | || ||||||| ||||| ||||||||||| |||| |||||||| |
|
|
| T |
2643219 |
atcatcatcgctcatcgcctatccaccatccaaaatgctgacatcattgcagtgtttcaaaatggcaagataatggaaacaggaactcatgaaagcctcg |
2643120 |
T |
|
| Q |
599 |
tgcaaaatgacagctctctttacacctccctcgttcgtcttcaacaaactagaaatgaccaaagtgaccacactccacctatcatgaatagagatcacat |
698 |
Q |
| |
|
|||| |||| | |||||||||||||| ||||||||||| |||||||||||||||||||||| ||| || || || |||||||||| |||| |||||| |
|
|
| T |
2643119 |
cgcaagatgaaaattctctttacacctctctcgttcgtctccaacaaactagaaatgaccaaaatgaggaccctgcatctatcatgaacagaggtcacat |
2643020 |
T |
|
| Q |
699 |
ccaaaacacg |
708 |
Q |
| |
|
||||||||| |
|
|
| T |
2643019 |
gcaaaacacg |
2643010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 292 - 528
Target Start/End: Complemental strand, 2598537 - 2598301
Alignment:
| Q |
292 |
aagatggtaattgtatatttactactataggttggggagaggggagtacaaatgtcagggggacaaaagcaaaggatttccattgcaagagccataatca |
391 |
Q |
| |
|
|||||| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| || | |
|
|
| T |
2598537 |
aagatgttaattacatgtttactactacaggttggggagaggggagtacaaatgtcagggggacaaaagcaaagaattgcaattgcaagagccatcataa |
2598438 |
T |
|
| Q |
392 |
aaaatccaagaattctattgctagacgaagcaacaagtgcactagattttgaatccgaacaagttgtccaagaagcttttgagaaagccacagttgaacg |
491 |
Q |
| |
|
||| |||| |||||||||| |||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||| | || ||||| |||||| ||| |
|
|
| T |
2598437 |
aaatgccaaaaattctattgttagacgaagcaacaagtgcactcgattctgaatccgaacgagtcgtccaagaagctctagacaaagcttcagttggacg |
2598338 |
T |
|
| Q |
492 |
caccaccattatcatcgctcaccgcttatccaccatc |
528 |
Q |
| |
|
||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
2598337 |
caccaccatcatcatcgctcaccgattatctaccatc |
2598301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 434
Target Start/End: Complemental strand, 33788455 - 33788367
Alignment:
| Q |
346 |
tcagggggacaaaagcaaaggatttccattgcaagagccataatcaaaaatccaagaattctattgctagacgaagcaacaagtgcact |
434 |
Q |
| |
|
||||| |||||||||||||| || ||||||||||||| || || ||||||||| |||||| |||| || |||||||| |||||||| |
|
|
| T |
33788455 |
tcaggaggacaaaagcaaagaatagccattgcaagagctatcataaaaaatccagtaattcttctgcttgatgaagcaactagtgcact |
33788367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 2588432 - 2588478
Alignment:
| Q |
216 |
aggatatgatactcaggttagtgctagcttcttttgatattatgcta |
262 |
Q |
| |
|
||||||||||||||| ||||| | ||| ||||||||||||||||||| |
|
|
| T |
2588432 |
aggatatgatactcatgttaggggtagtttcttttgatattatgcta |
2588478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 17872804 - 17872589
Alignment:
| Q |
18 |
tcttgatggagttgctattcataagttgcaacttaagtggcttaggtctcaaatgggtttagtaagtcaagaacctgctttgtttgcaacaagtattaag |
117 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||| |||| ||||||||||| ||||| || || ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
17872804 |
tcttgatggagtagctattcgtaacttgcagattaaatggcttaggtcaatgatggggttggttagtcaagaacctgctttatttgcaacaagcattaaa |
17872705 |
T |
|
| Q |
118 |
gagaatatactttttggaagagagaatgctacatatgaagaaattgtggatgctgctaaagcttccaatgctcataatttcatttcattgttgccacaag |
217 |
Q |
| |
|
||||||||| ||||||| | ||| ||||||| | || || ||||| || ||||| ||| || ||||||||| |||||||||| ||| | || |||| |
|
|
| T |
17872704 |
gagaatataatttttggtaaagaagatgctaccgaagatgagattgttgaagctgcgaaaatttgtaatgctcatgatttcatttctttgcttcctcaag |
17872605 |
T |
|
| Q |
218 |
gatatgatactcaggt |
233 |
Q |
| |
|
| || |||||||||| |
|
|
| T |
17872604 |
gttacaatactcaggt |
17872589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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