View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19424_low_15 (Length: 211)
Name: NF19424_low_15
Description: NF19424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19424_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 14343675 - 14343506
Alignment:
| Q |
21 |
cttacccataaaaacaacatttttcttttcccctaccttcctttctttgtcttttgtacaaacacctcaactgttcacatcaaaacagctgctacttggg |
120 |
Q |
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| T |
14343675 |
cttacccataaaaacaacatttttcttttccc-taccttcctttctttgtcttttgtacaaacacttcaactgttcacatcaaaacagctgctacttggg |
14343577 |
T |
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| Q |
121 |
tcacaacaaattcaaagccaaacaaatcacacgcgcttatataccaaaagttaaaagaagaaaacttccttatattcttcg |
201 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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| T |
14343576 |
tcacaacaaatt----------caaatcacacgcgcttatataccaaaagttaaaaaaagaaaacttccttatattattcg |
14343506 |
T |
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