View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19424_low_2 (Length: 712)
Name: NF19424_low_2
Description: NF19424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19424_low_2 |
 | |
|
| [»] scaffold1439 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 616; Significance: 0; HSPs: 35)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 616; E-Value: 0
Query Start/End: Original strand, 2 - 701
Target Start/End: Complemental strand, 22458528 - 22457829
Alignment:
| Q |
2 |
tgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacg |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458528 |
tgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacg |
22458429 |
T |
|
| Q |
102 |
gacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttg |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458428 |
gacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttg |
22458329 |
T |
|
| Q |
202 |
caaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttac |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22458328 |
caaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttac |
22458229 |
T |
|
| Q |
302 |
catgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatgg |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22458228 |
catgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatgg |
22458129 |
T |
|
| Q |
402 |
ctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttc |
501 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458128 |
ctgaaggatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttc |
22458029 |
T |
|
| Q |
502 |
aattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatt |
601 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458028 |
aattagtattgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatt |
22457929 |
T |
|
| Q |
602 |
agcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22457928 |
agcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttc |
22457829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 616; E-Value: 0
Query Start/End: Original strand, 2 - 701
Target Start/End: Complemental strand, 22481509 - 22480810
Alignment:
| Q |
2 |
tgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacg |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481509 |
tgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacg |
22481410 |
T |
|
| Q |
102 |
gacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttg |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481409 |
gacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttg |
22481310 |
T |
|
| Q |
202 |
caaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttac |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22481309 |
caaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttac |
22481210 |
T |
|
| Q |
302 |
catgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatgg |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22481209 |
catgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatgg |
22481110 |
T |
|
| Q |
402 |
ctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttc |
501 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481109 |
ctgaaggatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttc |
22481010 |
T |
|
| Q |
502 |
aattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatt |
601 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481009 |
aattagtattgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatt |
22480910 |
T |
|
| Q |
602 |
agcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22480909 |
agcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttc |
22480810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 1 - 655
Target Start/End: Complemental strand, 22358042 - 22357388
Alignment:
| Q |
1 |
ttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| ||||||| |||||||| |
|
|
| T |
22358042 |
ttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaat |
22357943 |
T |
|
| Q |
101 |
ggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatctt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| || |
|
|
| T |
22357942 |
ggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctc |
22357843 |
T |
|
| Q |
201 |
gcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggtta |
300 |
Q |
| |
|
|||||||| || | || |||||||||||||||||||||| | ||||| ||||||| | ||| ||| | || || |||| | |||| |
|
|
| T |
22357842 |
ccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagtta |
22357743 |
T |
|
| Q |
301 |
ccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatg |
400 |
Q |
| |
|
|||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||| | || ||||| | |||| | ||||| ||| |||||||| |
|
|
| T |
22357742 |
ccatgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggatt |
22357643 |
T |
|
| Q |
401 |
gctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagttt |
500 |
Q |
| |
|
|||||||| || |||||| | || | | || ||| ||||||| |||||||| |||||||||| ||| || || |||| ||||||||||||||| || |
|
|
| T |
22357642 |
gctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagtagatt |
22357543 |
T |
|
| Q |
501 |
caattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatat |
600 |
Q |
| |
|
|||| |||||||||||||||| |||| ||||| |||||||||||||||| |||| | |||||||||||||| | | | ||||| |||||| ||||||| |
|
|
| T |
22357542 |
caatcagtattgatggaagagtaaaacgttgtcgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaatat |
22357443 |
T |
|
| Q |
601 |
tagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagca |
655 |
Q |
| |
|
|| |||| | |||| ||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
22357442 |
tactgagggcaaacaattgtctttaactggaatgattcgacgcctatcaatagca |
22357388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 4 - 701
Target Start/End: Complemental strand, 22436671 - 22435971
Alignment:
| Q |
4 |
taagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacgga |
103 |
Q |
| |
|
||||| |||||||||||||||||| ||||||| ||||||| |||||||| ||||||| || ||||||||||||||| ||||||| |||| | ||| |
|
|
| T |
22436671 |
taagagatcttcttttgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataacttgagtgga |
22436572 |
T |
|
| Q |
104 |
cgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgca |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||| ||| ||||||| |||||||||||| |
|
|
| T |
22436571 |
tgttgtccacaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgca |
22436472 |
T |
|
| Q |
204 |
aagatagaaatacatcagaatggtataagtttagtgaaattctaaatataga---gttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggtta |
300 |
Q |
| |
|
||||||||||| | | |||||||| ||||||||||||| | ||||| ||| || ||| ||| ||| | || || |||| | |||| |
|
|
| T |
22436471 |
aagatagaaatcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagtta |
22436372 |
T |
|
| Q |
301 |
ccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatg |
400 |
Q |
| |
|
|||||||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| |
|
|
| T |
22436371 |
ccatgatttgccttactacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggatt |
22436272 |
T |
|
| Q |
401 |
gctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagttt |
500 |
Q |
| |
|
|||||||| ||||||||||| || || | || |||||||||||| ||||| | |||||||||| ||| ||| ||| |||| |||||||||| ||||||| |
|
|
| T |
22436271 |
gctgaagggttcgtgaaagaagagaggggaaggacattggaagatattgcaaaaggatatttaatagagttggtcaatagaagtttggtgcatgtagttt |
22436172 |
T |
|
| Q |
501 |
caattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatat |
600 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| ||||||||||| |||| |||||| |||||||||| |||| ||| || |||||||||||||||||||| |
|
|
| T |
22436171 |
caataagtattgatggaagagtaaaaagttgtcgtgttcatgatttagtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatat |
22436072 |
T |
|
| Q |
601 |
tagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggtt |
700 |
Q |
| |
|
|| ||||| | |||| ||||||| | | || ||||||||||||||| |||| ||| ||| ||||| | |||||| |||||||| |||||| ||| |
|
|
| T |
22436071 |
tactgaggacaatcaattttctttaactagagtgactcgacgcctatcaatggcaaccagttcttataatctaatggaaggtattgaaagctcacatgtt |
22435972 |
T |
|
| Q |
701 |
c |
701 |
Q |
| |
|
| |
|
|
| T |
22435971 |
c |
22435971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 655
Target Start/End: Complemental strand, 22442779 - 22442128
Alignment:
| Q |
1 |
ttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaac |
100 |
Q |
| |
|
|||||||||||||||||||||| || ||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||| || ||||||||| |
|
|
| T |
22442779 |
ttgtaagaaatcttcttttgtt------tacgaactaaaaggtttgactgtagaacaatctttggagttgttcaataagaaggcatttcatgacttaaac |
22442686 |
T |
|
| Q |
101 |
ggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatctt |
200 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |
|
|
| T |
22442685 |
ggacgttgtccaaaaaatcttattggtatatcttccaaaattgttgaaaaatgcaatggattaccactagcaattgtagtcattggtggtattttagctc |
22442586 |
T |
|
| Q |
201 |
gcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcgg |
297 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||| ||||| | ||||| || |||| || ||| ||| | | || |||| ||| | |
|
|
| T |
22442585 |
ccaaagatagaaatacaattgaatggtatgagtttaatgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaaaattttaggactcag |
22442486 |
T |
|
| Q |
298 |
ttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatgg |
397 |
Q |
| |
|
||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||||| |||| | | || | | |||| | ||||| ||| |||||| |
|
|
| T |
22442485 |
ttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcccgaagactatgaagcttgttcaaagacattgactcgtcaatgg |
22442386 |
T |
|
| Q |
398 |
atggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtag |
497 |
Q |
| |
|
|| |||||||| || |||||||| || | | || ||||||||| | |||||||| |||||||||| || || ||| ||||| ||||||||||||||| |
|
|
| T |
22442385 |
atagctgaagggtttgtgaaagaatatggggaaaggacattggaaaaggttgcagaaggatatttaaaagtgttaatctgtagaagtttggtgcaagtag |
22442286 |
T |
|
| Q |
498 |
tttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaa |
597 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||| |||||||||||||||| |||| | |||||||||||||| | | | ||||| |||||| |||| |
|
|
| T |
22442285 |
tttcaaccagtattgatggaagagtaaaaagttgccgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaa |
22442186 |
T |
|
| Q |
598 |
tattagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagca |
655 |
Q |
| |
|
||||| |||| | |||| ||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
22442185 |
tattactgagggaaaacaattgtctttaactggaatgattcgacgcctatcaatagca |
22442128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 701
Target Start/End: Complemental strand, 22367967 - 22367264
Alignment:
| Q |
1 |
ttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||| ||||||| ||||||| ||||||| || ||||||||||||||| | ||||| ||||| | | |
|
|
| T |
22367967 |
ttgtaagaaatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgttcaataagaaggcgttccatgacttgagc |
22367868 |
T |
|
| Q |
101 |
ggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatctt |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||| |
|
|
| T |
22367867 |
ggatattgtccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagctt |
22367768 |
T |
|
| Q |
201 |
gcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcgg |
297 |
Q |
| |
|
|||||||||| ||| || ||||||| |||||||||||||| | ||||| || ||| ||| ||| ||| | ||| || |||| || | |
|
|
| T |
22367767 |
gcaaagataggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaaaattctaggacttag |
22367668 |
T |
|
| Q |
298 |
ttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatgg |
397 |
Q |
| |
|
||||||||||||| ||| ||| |||||||||||||| ||||| ||||||||||||||||||| | | |||| | |||||||||||| ||| |||||| |
|
|
| T |
22367667 |
ttaccatgatttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagactcaaatgttcgttcaaatatattgactcgtcaatgg |
22367568 |
T |
|
| Q |
398 |
atggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtag |
497 |
Q |
| |
|
|| |||||||| || |||||||| || || | || ||||||||||| |||||||| ||| |||||| ||| |||||| ||||| ||||||||| ||||| |
|
|
| T |
22367567 |
attgctgaagggtttgtgaaagaagaaaggggaatgacattggaagaggttgcagaaggacatttaatagagttgatccgtagaagtttggtgcgagtag |
22367468 |
T |
|
| Q |
498 |
tttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaa |
597 |
Q |
| |
|
| || | |||||||||||||| | | ||||| |||||||||||||||| |||||| |||||||| | ||| ||| || ||||| |||||||||| |
|
|
| T |
22367467 |
atgggatcactattgatggaagagtagacagttgccgtgttcatgatctagtgcatgcaatgatccttaataaacatgaggatttaagcttttgcaagag |
22367368 |
T |
|
| Q |
598 |
tattagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacag |
697 |
Q |
| |
|
||||| |||||| |||| ||| || ||| ||| |||||||||||||||||||| || ||||||||| | |||||| |||||||| |||||| |
|
|
| T |
22367367 |
tattaccgaggacagacaattgccttcaactggaatgattcgacgcctatcaatagcatcaagttctgataatctaatggaaggtattgaaagctcacat |
22367268 |
T |
|
| Q |
698 |
gttc |
701 |
Q |
| |
|
|||| |
|
|
| T |
22367267 |
gttc |
22367264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 14 - 701
Target Start/End: Complemental strand, 22467978 - 22467291
Alignment:
| Q |
14 |
tcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccag |
113 |
Q |
| |
|
||||||| | ||||| |||| ||| || |||| |||||||||| || ||||| ||||| || |||||| | ||||| ||||| ||||| |||||||| |
|
|
| T |
22467978 |
tcttttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgtttaaaaagaaggcgttccatgacttggacggagtttgtccag |
22467879 |
T |
|
| Q |
114 |
aaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaa |
213 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||| |||| |||||||||| ||||| ||||||| |
|
|
| T |
22467878 |
aaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccggtgatattttatctcgcaaaaatagaaa |
22467779 |
T |
|
| Q |
214 |
tacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtct |
313 |
Q |
| |
|
| || ||||||| ||| |||||||||| | ||||| |||||||| | | | ||| | || || |||| | |||||||| |||| || |
|
|
| T |
22467778 |
tccaattgaatggtctaaatttagtgaaaatataaatgtagagttagagggatattccacaataagaaaaattttaggatttagttaccataatttacct |
22467679 |
T |
|
| Q |
314 |
tacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcg |
413 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | |||| ||| |||||||| |||||||| || | |
|
|
| T |
22467678 |
tacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcattcaaagacgttgactcgccaatggattgctgaagggtttg |
22467579 |
T |
|
| Q |
414 |
tgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattga |
513 |
Q |
| |
|
|||| || || || | | ||||||||||| ||||| || |||||||||| ||| |||||| |||| |||||||||||||||||||||| |||||||| |
|
|
| T |
22467578 |
tgaaggaagacagggggaggacattggaagaggttgctgaaggatatttaatagagttgatccatagaagtttggtgcaagtagtttcaataagtattga |
22467479 |
T |
|
| Q |
514 |
tggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgac |
613 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| ||||| | |
|
|
| T |
22467478 |
tggaagagtaaaaagttgtcgtgttcatgatctagtgcatgcaatgatccttgataaatatgaggatttaagtttttgcaagaatattactgaggacaaa |
22467379 |
T |
|
| Q |
614 |
caatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
|||| ||||||| ||| ||| |||||||||||||||||| || | ||||||||||| ||| || ||||||||||||||| |||| |
|
|
| T |
22467378 |
caattgtctttaactggaatgattcgacgcctatcaatagaaactacctctgataatttaatgaaagttattgaaaactcacatgttc |
22467291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 48 - 701
Target Start/End: Complemental strand, 22630434 - 22629786
Alignment:
| Q |
48 |
ctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttga |
147 |
Q |
| |
|
|||||||||| |||||||| ||||| || ||||| | ||||| ||||| | ||| |||||||||||||||| |||| |||||||| ||||||||||| |
|
|
| T |
22630434 |
ctgaagaacagtctttggaattgtttaaaaagaaagcgttccatgacttggatggattttgtccagaaaatctttttgacatatcttccaaaattgttga |
22630335 |
T |
|
| Q |
148 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattcta |
247 |
Q |
| |
|
||||||||| ||||| || |||||||||||| ||| |||| |||||||||| |||||| ||||||| || ||||||| |||||||||||||| | || |
|
|
| T |
22630334 |
aaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttatctcgcaaagttagaaatccaattgaatggtctaagtttagtgaaaatata |
22630235 |
T |
|
| Q |
248 |
aatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggat |
347 |
Q |
| |
|
||| |||||||| | ||| ||| | || | |||| | ||||||||||||| ||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
22630234 |
aatgtagagttagaggaatattccacaataagaaaaaatttaggatttagttaccatgatttaccttacaacctcaagtcatgtttcttgtattttggat |
22630135 |
T |
|
| Q |
348 |
tatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgt |
447 |
Q |
| |
|
| |||||||||| | |||||||| | |||| | |||| ||| |||||||| |||||||| || |||||||| | | | || |||||||||||| || |
|
|
| T |
22630134 |
tctatcctgaagactatatagttcgttcaaaggtgttgactcgccaatggatcgctgaagggtttgtgaaagaagtcaagggaagaacattggaagaggt |
22630035 |
T |
|
| Q |
448 |
tgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
547 |
Q |
| |
|
|| ||| |||||||||| ||| ||| || ||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||| |
|
|
| T |
22630034 |
tggagaaggatatttaatagagttggtccgtagaagtttggtgcaagtagtttcaacaagtat--atggaagagtaaaaagttgtcgtgtacatgatcta |
22629937 |
T |
|
| Q |
548 |
gtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggttcgacgcctat |
647 |
Q |
| |
|
|| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| ||||| | |||| ||||||| ||| ||| || ||||||||| |
|
|
| T |
22629936 |
gtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatattattgaggacaagcaattgtctttaactggaatgatttgacgcctat |
22629837 |
T |
|
| Q |
648 |
caatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
||||||||| | |||||||||| ||| ||| ||||||||||||||| |||| |
|
|
| T |
22629836 |
caatagcaacta---ctgataatttaatgaaaagtattgaaaactcacatgttc |
22629786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 117 - 601
Target Start/End: Complemental strand, 22635430 - 22634946
Alignment:
| Q |
117 |
atcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatac |
216 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||| ||||||||| |||| ||||| ||| ||||||||| | |
|
|
| T |
22635430 |
atcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtgatattctatctcgcacggatagaaattc |
22635331 |
T |
|
| Q |
217 |
atcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttac |
316 |
Q |
| |
|
| |||||||| ||||||||||||| | ||||| ||||||| | ||| ||| | ||| || |||| || |||||||||||||| | | | |
|
|
| T |
22635330 |
aatagaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattccatgataagaaaaattttaggacttagttaccatgatttgccatgc |
22635231 |
T |
|
| Q |
317 |
aatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtga |
416 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| |||||||| ||||||| |
|
|
| T |
22635230 |
tacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaagggttcgtga |
22635131 |
T |
|
| Q |
417 |
aagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgg |
516 |
Q |
| |
|
|||| || || | || ||||| ||||| |||||||| ||||||||| ||| |||||| |||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
22635130 |
aagaagacaggggaaggacatttgaagaggttgcagaaggatatttagtagagttgatccatagaagtttggtgcaagtagtttcaactagtattgatgg |
22635031 |
T |
|
| Q |
517 |
aagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatt |
601 |
Q |
| |
|
||||| ||||||||| | |||||||||||||| |||| | |||||||||| |||| | | || ||||||||||||||||||||| |
|
|
| T |
22635030 |
aagagtaaaaagttgccgcgttcatgatctagtgcatgaaatgatccttgacaaatttaaggatttaagtttttgcaagaatatt |
22634946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 22431213 - 22430972
Alignment:
| Q |
1 |
ttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||| | |||||| ||||||| || |||||||||||||| ||||| ||||| | | |
|
|
| T |
22431213 |
ttgtaagaaatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgttcaataagaaagtgttccatgacttgagc |
22431114 |
T |
|
| Q |
101 |
ggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatctt |
200 |
Q |
| |
|
||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||| |
|
|
| T |
22431113 |
ggatattgtccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagctt |
22431014 |
T |
|
| Q |
201 |
gcaaagatagaaatacatcagaatggtataagtttagtgaaa |
242 |
Q |
| |
|
|||||||||| ||| || ||||||| |||||||||||||| |
|
|
| T |
22431013 |
gcaaagataggaatccaattgaatggtctaagtttagtgaaa |
22430972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 48 - 701
Target Start/End: Complemental strand, 22353806 - 22353155
Alignment:
| Q |
48 |
ctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttga |
147 |
Q |
| |
|
||||| ||||||||||||| ||||| || |||||| | |||| ||||| ||||| ||||||| |||||||| || |||||||||| ||||| |||| |
|
|
| T |
22353806 |
ctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttttatatatcttccgaaattattga |
22353707 |
T |
|
| Q |
148 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattcta |
247 |
Q |
| |
|
||||||||| ||||| || || ||||||||| |||| ||| |||||||||| |||||||||||||| || ||||||| |||||||||||||| | || |
|
|
| T |
22353706 |
aaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaatggtctaagtttagtgaaaatata |
22353607 |
T |
|
| Q |
248 |
aatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtctt-acaatctcaagtcatgtttgttgtattttgga |
346 |
Q |
| |
|
||| ||||||| | ||| ||| | || || |||| | |||||||||||||| ||| || | |||||||||||||| |||||||||||| |
|
|
| T |
22353606 |
aatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacctcaagtcatgtttcttgtattttgga |
22353507 |
T |
|
| Q |
347 |
ttatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatg |
446 |
Q |
| |
|
||||||| |||| | |||| | || ||| ||||| ||| |||||||| ||||| || || |||||||| | | | || ||| ||||||| | |
|
|
| T |
22353506 |
ttatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtttgtgaaagaatacgggggaaggacaatggaagagg |
22353407 |
T |
|
| Q |
447 |
ttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatct |
546 |
Q |
| |
|
||||||| |||||||||| ||| || ||| |||| ||||||||||||||| |||| | |||||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
22353406 |
ttgcagaaggatatttaaaagagttaatccatagaagtttggtgcaagtagattcagtcagtattgatggaagagtaaaaagttgtcgtgttcacgatct |
22353307 |
T |
|
| Q |
547 |
agtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggttcgacgccta |
646 |
Q |
| |
|
||| |||| | |||||||| ||||| ||| || |||||||||||||||||||||| |||| | | ||| || |||| ||| ||| || |||||||| |
|
|
| T |
22353306 |
agtgcatgaaatgatccttagaaaatatgaggatttaagtttttgcaagaatatta-cgagca--aacaactgtcattaactggaatgatttgacgccta |
22353210 |
T |
|
| Q |
647 |
tcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
|||||||||| || |||||||| || ||| ||| ||||||||||||||| |||| |
|
|
| T |
22353209 |
tcaatagcaactagttctgataagttaatgaaaagtattgaaaactcacatgttc |
22353155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 297 - 655
Target Start/End: Complemental strand, 22430914 - 22430556
Alignment:
| Q |
297 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
396 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||| | ||||||| | |||| | ||| | | | ||||| |
|
|
| T |
22430914 |
gttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatg |
22430815 |
T |
|
| Q |
397 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
496 |
Q |
| |
|
||| |||||||| || |||||||| | | | || |||||| |||| |||||||| |||||||||| ||| |||||| |||| |||||||||||||| |
|
|
| T |
22430814 |
gattgctgaagggtttgtgaaagaaaaaacgggaaggacattgaaagaggttgcagaaggatatttaatagagttgatccatagaagtttggtgcaagta |
22430715 |
T |
|
| Q |
497 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaaga |
596 |
Q |
| |
|
| |||||| |||||||||||||||| || ||||||| |||||||||||||||| |||| | |||||||| |||||| ||| || ||||| ||||| ||| |
|
|
| T |
22430714 |
gattcaataagtattgatggaagagtaagaagttgtcgtgttcatgatctagtgcatgaaatgatccttaaaaaatatgaggatttaagcttttgtaagt |
22430615 |
T |
|
| Q |
597 |
atattagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagca |
655 |
Q |
| |
|
|||| | |||| | | |||| | ||||| ||| ||| ||| |||||||||||||||| |
|
|
| T |
22430614 |
atatcaccgagaacaatcaattgtatttaactggaatgattcaacgcctatcaatagca |
22430556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 326 - 656
Target Start/End: Complemental strand, 22620599 - 22620269
Alignment:
| Q |
326 |
tcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgata |
425 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||| || || |||| | |||| | |||||||||||||||||| |||||||| || || ||||| || | |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaaa |
22620500 |
T |
|
| Q |
426 |
gcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaa |
525 |
Q |
| |
|
| | || || |||||||| |||||||| ||||| |||||||| |||||| |||| |||||||||||||| |||| | || || ||||||| | |||| |
|
|
| T |
22620499 |
gggggaatactttggaagaagttgcagaaggatacttaacagagttgatccatagaagtttggtgcaagtatcttcactaagaatcgatggaaaaacaaa |
22620400 |
T |
|
| Q |
526 |
aagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatcttta |
625 |
Q |
| |
|
||||||||| |||||||||||| | | | |||| |||||||| ||||| || |||||||||||||| ||||||| || ||| || ||||||||| |
|
|
| T |
22620399 |
aagttgttgcgttcatgatctaatacgtatgatgatacttgaaaagtgtgaggatctaagtttttgcaagtatattagtgaagattgtcattcatcttta |
22620300 |
T |
|
| Q |
626 |
agtgggatggttcgacgcctatcaatagcaa |
656 |
Q |
| |
|
|||| | |||||||||||||||||||| |
|
|
| T |
22620299 |
agtgaagttactcgacgcctatcaatagcaa |
22620269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 318 - 652
Target Start/End: Complemental strand, 22656777 - 22656443
Alignment:
| Q |
318 |
atctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaa |
417 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| |||| || | |||| |||| | | |||| ||||||||||| |||||||| || ||||| |
|
|
| T |
22656777 |
atcttaagtcatgtttgttgtattttggaatatatccagaagattatgaagttgaatcaaagagagtgatacggcaatggatagctgaaggttttgtgaa |
22656678 |
T |
|
| Q |
418 |
agatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgga |
517 |
Q |
| |
|
||| || || | ||||| |||||||| |||||||| |||||||||||||| ||||| | || ||||||| |||||| ||| |||| ||||| ||| |
|
|
| T |
22656677 |
agaagaaagggggaaaactttggaagaagttgcagaaggatatttaacagagttgattcgccgatgtttggtacaagtatcctcagttagaattgacgga |
22656578 |
T |
|
| Q |
518 |
agagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaat |
617 |
Q |
| |
|
| | | |||||||||||||| |||||| || | ||| ||||||||||||| ||||| || |||||||| |||||| ||||||| | |||| ||| | |
|
|
| T |
22656577 |
aaaactaaaagttgttgtgtccatgatttaatacatatgatgatccttgaaaagtgtgaggatttaagtttctgcaagcatattagtgcagatggccatt |
22656478 |
T |
|
| Q |
618 |
catctttaagtgggatggttcgacgcctatcaata |
652 |
Q |
| |
|
||||| ||||||| || ||||||||||||||||| |
|
|
| T |
22656477 |
catctataagtggaattattcgacgcctatcaata |
22656443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 297 - 595
Target Start/End: Complemental strand, 30989037 - 30988739
Alignment:
| Q |
297 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
396 |
Q |
| |
|
||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||| |||| || | |||| |||| | ||||||||| ||||| |
|
|
| T |
30989037 |
gttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaagattatgaagttaaatcaaagagattgattcgacaatg |
30988938 |
T |
|
| Q |
397 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
496 |
Q |
| |
|
| | |||||||| |||||||| || || || | || || |||||||| |||||||| |||||||||||||| |||||| |||| | |||||||||||| |
|
|
| T |
30988937 |
ggtagctgaagggttcgtgaaggaggaaagagggaagactttggaagacgttgcagaaggatatttaacagagttgatccatagaagcttggtgcaagta |
30988838 |
T |
|
| Q |
497 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaag |
595 |
Q |
| |
|
||| |||| ||||||| | ||| ||| ||||| |||||||||||||| | | | ||||||||||||||| ||| || |||| |||||||||| |
|
|
| T |
30988837 |
tcttcggttagagttgatggtaaagctaaaggttgtcgtgttcatgatctaatacgcgatatgatccttgaaaaatttgaggatttaaatttttgcaag |
30988739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 434 - 602
Target Start/End: Complemental strand, 37930467 - 37930298
Alignment:
| Q |
434 |
acattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgtt |
533 |
Q |
| |
|
||||||||| | ||||| || |||||||||| ||| || ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
37930467 |
acattggaaaaggttgcggaaggatatttaaaagagttaatctgtagaagtttggtgcaagtagtttcaaccggtattgatggaagagtaaaaagttgtc |
37930368 |
T |
|
| Q |
534 |
gtgttcatgatctagtccatgcattgatcctt-gaaaaatgtgaagaattaagtttttgcaagaatatta |
602 |
Q |
| |
|
|||||||||||||||| |||| | |||||||| || |||| | || |||||||||||| ||||||||| |
|
|
| T |
37930367 |
gtgttcatgatctagtgcatgaaatgatcctttgacaaatttatggatttaagtttttgcgagaatatta |
37930298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 303 - 547
Target Start/End: Original strand, 21946364 - 21946608
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||| | ||||||||||||| ||||| ||||||||| ||||||| |||| || | |||| | || | | ||||||| |||||||| || |
|
|
| T |
21946364 |
atgatttgccttgctatctcaagtcatgcttgttttattttggagtatatccagaagattatgaagttaaatcgaagagagtgattcgacaatggatagc |
21946463 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
|||||| || ||||| || || || | || || |||||||| || ||||| |||||||||||||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
21946464 |
tgaagggtttgtgaaggaggaaagagggaagactttggaagaagtggcagaaggatatttaacagagttgatccatagaagcctggttcaagtatcttca |
21946563 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
547 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| |
|
|
| T |
21946564 |
cttagaattgatggtaaagctaaaggttgtcgtgttcatgatcta |
21946608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 437 - 625
Target Start/End: Complemental strand, 22647776 - 22647588
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| |||||||| |||||||||| || |||||| |||| ||||||| |||||| |||| |||| |||||||||| | | |||||||| |||| |
|
|
| T |
22647776 |
ttggaagaagttgcagaacgatatttaactgagttgatccatagaagtttggttcaagtatcttcagttagaattgatggaaaaactaaaagttgctgtg |
22647677 |
T |
|
| Q |
537 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatcttta |
625 |
Q |
| |
|
|||||||||| | ||| ||||||||||||| |||| || ||||||| |||||| ||||||| || ||||| | ||||||||| |
|
|
| T |
22647676 |
ttcatgatctgatacatatgatgatccttgaaaagagtgaggatataagtttctgcaagcatattagtgaagatgatctttcatcttta |
22647588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 22620954 - 22620753
Alignment:
| Q |
1 |
ttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccac---gactta |
97 |
Q |
| |
|
|||||| |||||||||||| |||| ||| ||||||| || ||| |||| ||||||||||| |||||||||||||||||| ||| | ||||| |
|
|
| T |
22620954 |
ttgtaaaaaatcttcttttattgaggtgcatgaactacaacctttaactgaggaacaatcttttgagttgttcaataagaaggtatttcgatttgacttt |
22620855 |
T |
|
| Q |
98 |
aacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttat |
197 |
Q |
| |
|
| ||| |||||||| || |||| |||||||||||||| |||||| | ||||||||| || || ||||||||||||||| | |||||||| |||||| |
|
|
| T |
22620854 |
gatggaagttgtccaaaagatctaattgatatatcttccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtcttttat |
22620755 |
T |
|
| Q |
198 |
ct |
199 |
Q |
| |
|
|| |
|
|
| T |
22620754 |
ct |
22620753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 649
Target Start/End: Original strand, 21937893 - 21938239
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| |||| || | | || |||| | | | ||||| |||||||| || |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaagattttgaaattagaccaaagagagtcattcgacaatggatagc |
21937992 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
||||||||| ||||| || || | | ||| || ||||||| || ||||| |||||| ||||||| ||||| |||| | |||| |||||| ||| |
|
|
| T |
21937993 |
tgaaggatttgtgaaggaggaaaagggaaagactatggaagaagtggcagagggatatctaacagagttgatacatagaagcctggttcaagtatcctca |
21938092 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatta |
602 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| | | || |||||||||||||| ||| || || | |||||||||| |||| | |
|
|
| T |
21938093 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatctaatacgtgatatgatccttgaaaaagatgaggattttaatttttgcaagcatatca |
21938192 |
T |
|
| Q |
603 |
gcgaggatgaccaatcatctttaagtgggatggttcgacgcctatca |
649 |
Q |
| |
|
| || |||| ||| ||| |||||||| || ||||| ||||||||| |
|
|
| T |
21938193 |
gtgatgatggacaaagatccttaagtggaatagttcggcgcctatca |
21938239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 652
Target Start/End: Original strand, 22180157 - 22180506
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| ||||||| || | || | |||| | || | | | | ||| ||||||| || |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatccagaggattatgaagttaaatcgaagagagtaactcgaaaatggatagc |
22180256 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
|||||| || ||||| || || | | ||||||| ||||||| || ||||| |||||| ||||||| |||||| |||| | |||| |||||| ||| |
|
|
| T |
22180257 |
tgaagggtttgtgaaggaggaaaagggaaaaacaatggaagaagtggcagagggatatctaacagagttgatccatagaagcctggttcaagtatcttcg |
22180356 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatta |
602 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| | | || |||||||| ||||| ||| || || | |||||||||| |||||| |
|
|
| T |
22180357 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatctaatacgtgatatgatccttcaaaaaaatgaggattttaatttttgcaagcatatta |
22180456 |
T |
|
| Q |
603 |
gcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaata |
652 |
Q |
| |
|
| || |||| || ||| |||||||| || ||||| |||||||||||| |
|
|
| T |
22180457 |
gtgatgatggacagatatccttaagtggaatagttcggcgcctatcaata |
22180506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 545
Target Start/End: Original strand, 22115825 - 22116067
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| |||| || |||| || | |||| |||| | | | | ||| |||||||| || |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatacccagaagattttgaagttaaatcaaagagaatcactcgacaatggatagc |
22115924 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
|||||| || ||||| || || || | ||| || |||| || || ||||| |||||| ||||||| |||||| |||| || |||| |||||| ||| |
|
|
| T |
22115925 |
tgaagggtttgtgaaggaggaaaggggaaagactatggatgaagtggcagagggatatataacagagttgatccatagaagtatggttcaagtatcttcg |
22116024 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatc |
545 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||| |
|
|
| T |
22116025 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatc |
22116067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 547
Target Start/End: Original strand, 22053446 - 22053690
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||| ||||||| ||||||||||||||| ||||||| |||| || | |||| | |||| | ||||||| |||||||| || |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaagattatgaagttaattcaaagcgagtgattcgacaatggatagc |
22053545 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
||||| || ||||| || || | | || || |||||||| || ||||| ||||||||| |||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
22053546 |
agaagggtttgtgaaggaggaaaaggggaagactttggaagaagtggcagaaggatatttatcagagttgatccatagaagcctggttcaagtatcttca |
22053645 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
547 |
Q |
| |
|
|||| |||||||| | ||| ||| | ||| |||||||||||||| |
|
|
| T |
22053646 |
cttagaattgatggcaaagctaaaggatgtcgtgttcatgatcta |
22053690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 22187424 - 22187501
Alignment:
| Q |
11 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
88 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22187424 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22028740 - 22028796
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22028796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22035257 - 22035313
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22035313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22105448 - 22105504
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| ||||||||||||| |||||||| |||||| ||||||| |||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaag |
22105504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22187728 - 22187784
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22187784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 21930899 - 21930934
Alignment:
| Q |
53 |
gaacaatctttggagttgttcaataagaagacattc |
88 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21930899 |
gaacaatctttggagttgttcaataagaaggcattc |
21930934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 21937631 - 21937666
Alignment:
| Q |
53 |
gaacaatctttggagttgttcaataagaagacattc |
88 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21937631 |
gaacaatctttggagttgttcaataagaaggcattc |
21937666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 30989297 - 30989258
Alignment:
| Q |
49 |
tgaagaacaatctttggagttgttcaataagaagacattc |
88 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30989297 |
tgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 547
Target Start/End: Original strand, 21931295 - 21931405
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| |||||| |||| | | || |||||| |||| |||| |||||||| | ||| ||| ||||| ||| |
|
|
| T |
21931295 |
ttggaagaagtggcagaaggatatttaacagagttgatccatagaagcctcgttcaagtatcttcacttagaattgatggcaaagctaaaggttgtcgtg |
21931394 |
T |
|
| Q |
537 |
ttcatgatcta |
547 |
Q |
| |
|
||||||||||| |
|
|
| T |
21931395 |
ttcatgatcta |
21931405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 22028436 - 22028506
Alignment:
| Q |
11 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaa |
81 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || |||||||||||||||||||||||||||||| |
|
|
| T |
22028436 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaa |
22028506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 592
Target Start/End: Complemental strand, 22614842 - 22614708
Alignment:
| Q |
458 |
tatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcat |
557 |
Q |
| |
|
|||||| |||| ||||| | |||| ||||||||||| | ||| |||| ||||||||||| || ||||||||| |||||||||||||| | | || |
|
|
| T |
22614842 |
tatttatcagagttgattaatagaagtttggtgcaaatctcttcgattaatattgatggaaaagttaaaagttgtcgtgttcatgatctattacgtgtga |
22614743 |
T |
|
| Q |
558 |
tgatccttgaaaaatgtgaagaattaagtttttgc |
592 |
Q |
| |
|
||||| ||||||||| | | || |||||||||||| |
|
|
| T |
22614742 |
tgatctttgaaaaatttaaggatttaagtttttgc |
22614708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 468
Target Start/End: Complemental strand, 22628182 - 22628096
Alignment:
| Q |
382 |
attgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacaga |
468 |
Q |
| |
|
||||||||| |||| ||| ||||||||||| |||||||| || || | |||||| || ||||| || |||| |||||||||||||| |
|
|
| T |
22628182 |
attgattcgacaattgatagctgaaggatttgtgaaagaagaaaggggaaaaactttcgaagaagtcacagaaggatatttaacaga |
22628096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 392 - 656
Target Start/End: Original strand, 34990046 - 34990310
Alignment:
| Q |
392 |
caatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgc |
491 |
Q |
| |
|
|||||||| |||||||| || |||||||| || || | || || |||||||| |||| ||| ||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
34990046 |
caatggatagctgaagggtttgtgaaagaggaaagtgggaagactttggaagaagttgaagaaagatatttaacagagttgattcgtagaagtttggtgc |
34990145 |
T |
|
| Q |
492 |
aagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttg |
591 |
Q |
| |
|
||||| ||| |||| |||||||||| | | | ||||||||||||||||||||| | ||| ||||||||||||| ||||| || ||||||||||| |
|
|
| T |
34990146 |
aagtatcctcagttagcattgatggaaaaactagaagttgttgtgttcatgatctgatacatatgatgatccttgaaaagtgtgaggatttaagtttttg |
34990245 |
T |
|
| Q |
592 |
caagaatattagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaa |
656 |
Q |
| |
|
|||| || | | || || || || |||||||||||||| | | |||||||||||||||||| |
|
|
| T |
34990246 |
caagcatttcaatgatgacgatcattcatctttaagtggaactatcagacgcctatcaatagcaa |
34990310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 437 - 656
Target Start/End: Original strand, 34976245 - 34976464
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34976245 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34976344 |
T |
|
| Q |
537 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggt |
636 |
Q |
| |
|
|||||||||| | | | ||||||||||||| ||||| || ||||||||||||||| || | | || |||| || |||||||||||||| | | |
|
|
| T |
34976345 |
ttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgcaagcatttcaatgaagatggtcattcatctttaagtggaactat |
34976444 |
T |
|
| Q |
637 |
tcgacgcctatcaatagcaa |
656 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
34976445 |
tagacgcctatcaatagcaa |
34976464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 437 - 656
Target Start/End: Original strand, 34983356 - 34983575
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34983356 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34983455 |
T |
|
| Q |
537 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggt |
636 |
Q |
| |
|
|||||||||| | | | ||||||||||||| ||||| || ||||||||||||||| || | | || |||| || |||||||||||||| | | |
|
|
| T |
34983456 |
ttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgcaagcatttcaatgaagatggtcattcatctttaagtggaactat |
34983555 |
T |
|
| Q |
637 |
tcgacgcctatcaatagcaa |
656 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
34983556 |
tagacgcctatcaatagcaa |
34983575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 546
Target Start/End: Complemental strand, 2305131 - 2304969
Alignment:
| Q |
384 |
tgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagagg |
483 |
Q |
| |
|
||||||| || ||||| |||||||| || ||||| || || || | || || |||||||| |||||||| ||||||||| |||| ||||| || || | |
|
|
| T |
2305131 |
tgattcgacagtggatagctgaagggtttgtgaaggaggaaagtgggaagactttggaagaagttgcagaaggatatttatcagagttgattcgtcgaag |
2305032 |
T |
|
| Q |
484 |
tttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatct |
546 |
Q |
| |
|
||||||||||||| ||| |||| |||||||||| | | ||||||||||||||||||||||| |
|
|
| T |
2305031 |
tttggtgcaagtatcctcagttagcattgatggaaaatctaaaagttgttgtgttcatgatct |
2304969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 872224 - 872150
Alignment:
| Q |
529 |
ttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattag |
603 |
Q |
| |
|
|||| |||||||||||||| | |||| |||||||||||||||| ||| || |||| |||||||||| ||||||| |
|
|
| T |
872224 |
ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattag |
872150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 1233501 - 1233427
Alignment:
| Q |
529 |
ttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattag |
603 |
Q |
| |
|
|||| |||||||||||||| | |||| |||||||||||||||| ||| || |||| |||||||||| ||||||| |
|
|
| T |
1233501 |
ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattag |
1233427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 595
Target Start/End: Original strand, 40580766 - 40580966
Alignment:
| Q |
395 |
tggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaag |
494 |
Q |
| |
|
||||| |||||||| || ||||| || || || | ||| || |||||||| ||||| || | ||||||||| || ||||| || | |||||||||||| |
|
|
| T |
40580766 |
tggatagctgaagggtttgtgaaggaggaaagtggaaagactttggaagaagttgctgaagtatatttaactgagttgattcgtcgtagtttggtgcaag |
40580865 |
T |
|
| Q |
495 |
tagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaa |
594 |
Q |
| |
|
|| |||||||| |||||||||| | | |||||||||| |||||| ||| | | | | |||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
40580866 |
tatcctcaattagaattgatggaaaaactaaaagttgttttgttcacgatttgatacgtatgatgatccatgaaaagtgtgaggaattaagtttttgcaa |
40580965 |
T |
|
| Q |
595 |
g |
595 |
Q |
| |
|
| |
|
|
| T |
40580966 |
g |
40580966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1633 - 1547
Alignment:
| Q |
1 |
ttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
87 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||| || ||| |||||||| |||| || || ||||| ||||||||| |||| |
|
|
| T |
1633 |
ttgtaagaaatcttcttttattgaagtgcatgaactacaacctttaactgaagaaaaatcatttgatttgtttaataagaaggcatt |
1547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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