View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19425_high_10 (Length: 602)
Name: NF19425_high_10
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19425_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 92 - 588
Target Start/End: Original strand, 32531947 - 32532465
Alignment:
| Q |
92 |
gggagtgagtatcataataattcctaattactccaattaactctcattgaacaacattgaaaattcacataattttttgagtaaatatctacaaagcact |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
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| T |
32531947 |
gggagtgagtatcataataattcctaattactccaattaactctcattgaacaacattgaaaattaacataattttttgagtaaagatctacaaagcact |
32532046 |
T |
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| Q |
192 |
atgaaaat----------------------tgaactaaaaaacaaaaccaagttacctctggcttgcaatctttgcaaagggacccaagatggttaacaa |
269 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32532047 |
atgaaaattgaaaaaagaacaaaatctaattgaactaaaaaacaaaaccaagttacctctggcttgcaatctttgcaaagggacccaagatggttaacaa |
32532146 |
T |
|
| Q |
270 |
gataagtggaagaataagactcagaagcactttgaggagaaacaatgtaaagcaaagtcaacaaatcacccttattaacaacatgagtaagtgcccaaat |
369 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32532147 |
gataagtggaagaataagagtcagaagcactttgaggagaaacaatgtaaagcaaagtcaacaaatcacccttattaacaacatgagtaagtgcccaaat |
32532246 |
T |
|
| Q |
370 |
cattgcatgcttagaatgtgaagtaccatcaaccacaaccataactctctttctcaccatcattccacaactctcttcatttccatacatgttaatgtta |
469 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32532247 |
cattgcatgcttagaatgtgaagtaccatcaaccacaaccataactctctttctcaccatcattccacaactctcttcatttccatacatgttaatgtta |
32532346 |
T |
|
| Q |
470 |
aacccttccatttgactcaaatttgtctcacaagtcactcctaaactattgttgttgtatgtgttttttccactccacctatttgatgttgatttccaag |
569 |
Q |
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||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32532347 |
aacccttccatttgactcaaatttgtctcacaactcacccctaaactattgttgttgtatgtgttttttccactccacctatttgatgttgatttccaag |
32532446 |
T |
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| Q |
570 |
tctcctttgcacttaactg |
588 |
Q |
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||||||||||||||||||| |
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| T |
32532447 |
tctcctttgcacttaactg |
32532465 |
T |
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