View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19425_high_20 (Length: 468)

Name: NF19425_high_20
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19425_high_20
NF19425_high_20
[»] chr7 (58 HSPs)
chr7 (108-451)||(37131723-37132066)
chr7 (112-338)||(37133481-37133707)
chr7 (108-338)||(46245123-46245353)
chr7 (202-338)||(45277889-45278025)
chr7 (202-336)||(40028460-40028594)
chr7 (202-339)||(8231556-8231693)
chr7 (202-334)||(12180561-12180693)
chr7 (202-338)||(21716541-21716677)
chr7 (202-338)||(31392059-31392195)
chr7 (202-338)||(31393581-31393717)
chr7 (202-338)||(8230071-8230207)
chr7 (202-338)||(13420208-13420344)
chr7 (202-338)||(21715073-21715209)
chr7 (202-338)||(40029951-40030087)
chr7 (202-338)||(45276411-45276546)
chr7 (202-338)||(46246497-46246633)
chr7 (162-337)||(14774515-14774688)
chr7 (162-337)||(15224968-15225141)
chr7 (110-338)||(15135380-15135607)
chr7 (202-336)||(11671208-11671342)
chr7 (185-338)||(12178484-12178636)
chr7 (202-343)||(32882637-32882777)
chr7 (218-338)||(37348736-37348856)
chr7 (202-324)||(4675719-4675840)
chr7 (108-333)||(11747398-11747623)
chr7 (232-338)||(21017733-21017838)
chr7 (202-338)||(11669842-11669978)
chr7 (202-338)||(15136862-15136997)
chr7 (218-336)||(37350139-37350260)
chr7 (202-336)||(32881119-32881253)
chr7 (225-336)||(21016238-21016349)
chr7 (252-338)||(706744-706830)
chr7 (208-338)||(708080-708210)
chr7 (109-338)||(31734584-31734812)
chr7 (253-338)||(41593176-41593261)
chr7 (232-338)||(3704399-3704510)
chr7 (217-338)||(30792767-30792894)
chr7 (253-343)||(41384145-41384235)
chr7 (185-338)||(14781911-14782066)
chr7 (185-338)||(15231944-15232099)
chr7 (253-338)||(38758290-38758375)
chr7 (253-338)||(41591516-41591601)
chr7 (270-338)||(25008093-25008161)
chr7 (202-338)||(43546652-43546788)
chr7 (252-338)||(28556247-28556333)
chr7 (253-338)||(27161968-27162053)
chr7 (277-338)||(28848559-28848620)
chr7 (270-338)||(25009475-25009543)
chr7 (282-338)||(41385811-41385867)
chr7 (277-338)||(21914635-21914696)
chr7 (253-338)||(27160306-27160391)
chr7 (277-338)||(38756656-38756717)
chr7 (270-338)||(28849958-28850026)
chr7 (282-338)||(32429872-32429928)
chr7 (270-338)||(43545343-43545411)
chr7 (277-338)||(20208461-20208522)
chr7 (277-337)||(3698815-3698874)
chr7 (232-324)||(28098949-28099041)
[»] chr3 (38 HSPs)
chr3 (108-343)||(40499080-40499315)
chr3 (108-338)||(31796662-31796892)
chr3 (108-338)||(48568358-48568588)
chr3 (108-338)||(41083099-41083329)
chr3 (202-338)||(53527971-53528107)
chr3 (202-336)||(33734424-33734558)
chr3 (202-338)||(33732966-33733102)
chr3 (202-338)||(41081803-41081939)
chr3 (202-338)||(53529456-53529592)
chr3 (201-336)||(22942339-22942476)
chr3 (202-336)||(30700299-30700433)
chr3 (227-336)||(41879927-41880036)
chr3 (202-338)||(31795374-31795510)
chr3 (202-338)||(48566997-48567133)
chr3 (202-345)||(31656947-31657091)
chr3 (225-338)||(32558920-32559034)
chr3 (199-338)||(32613884-32614022)
chr3 (202-345)||(32615567-32615711)
chr3 (245-338)||(30701806-30701898)
chr3 (202-338)||(32559803-32559941)
chr3 (202-336)||(31017667-31017799)
chr3 (202-344)||(44458590-44458732)
chr3 (227-340)||(8528291-8528404)
chr3 (264-337)||(24613596-24613669)
chr3 (261-338)||(31199250-31199327)
chr3 (270-338)||(3150009-3150077)
chr3 (270-338)||(8391402-8391470)
chr3 (253-341)||(27320670-27320757)
chr3 (282-338)||(33780658-33780714)
chr3 (288-338)||(24612279-24612329)
chr3 (282-336)||(33781496-33781550)
chr3 (253-336)||(31200918-31201002)
chr3 (270-338)||(45981408-45981476)
chr3 (282-345)||(3026883-3026946)
chr3 (270-333)||(8392793-8392856)
chr3 (202-258)||(41881575-41881631)
chr3 (270-338)||(45982789-45982857)
chr3 (280-336)||(46725269-46725325)
[»] chr5 (36 HSPs)
chr5 (108-338)||(38624717-38624947)
chr5 (202-338)||(1418858-1418994)
chr5 (202-338)||(30332284-30332420)
chr5 (202-337)||(25916200-25916335)
chr5 (203-338)||(30333930-30334065)
chr5 (202-338)||(17554925-17555062)
chr5 (108-307)||(11772528-11772727)
chr5 (218-338)||(27756723-27756843)
chr5 (185-338)||(16308566-16308719)
chr5 (202-338)||(38626092-38626228)
chr5 (202-338)||(8874196-8874332)
chr5 (202-345)||(39101709-39101852)
chr5 (202-340)||(16310021-16310159)
chr5 (202-337)||(36619546-36619682)
chr5 (226-337)||(8872522-8872633)
chr5 (217-338)||(39103348-39103469)
chr5 (202-335)||(28592081-28592214)
chr5 (202-338)||(36621148-36621284)
chr5 (202-337)||(25914493-25914627)
chr5 (232-338)||(28803657-28803762)
chr5 (244-340)||(18201309-18201405)
chr5 (205-290)||(1417459-1417545)
chr5 (202-336)||(11771201-11771335)
chr5 (184-338)||(17551970-17552126)
chr5 (202-345)||(37498817-37498959)
chr5 (253-338)||(33489872-33489957)
chr5 (264-316)||(33084093-33084145)
chr5 (253-337)||(35931321-35931405)
chr5 (202-316)||(38997344-38997458)
chr5 (233-338)||(28804835-28804940)
chr5 (282-338)||(9672353-9672409)
chr5 (232-292)||(13163067-13163127)
chr5 (253-341)||(35929520-35929608)
chr5 (270-338)||(42775421-42775489)
chr5 (270-338)||(42776808-42776876)
chr5 (283-318)||(28592421-28592456)
[»] chr2 (56 HSPs)
chr2 (108-343)||(45499301-45499536)
chr2 (108-338)||(40303294-40303524)
chr2 (202-338)||(1841677-1841813)
chr2 (202-336)||(13947751-13947884)
chr2 (202-336)||(14088940-14089073)
chr2 (202-338)||(1840158-1840294)
chr2 (202-338)||(40304684-40304820)
chr2 (202-336)||(22053128-22053261)
chr2 (202-334)||(16142231-16142363)
chr2 (202-338)||(28563377-28563513)
chr2 (202-345)||(38729984-38730128)
chr2 (202-338)||(45492954-45493090)
chr2 (202-338)||(45500696-45500832)
chr2 (218-338)||(38728186-38728305)
chr2 (218-337)||(44465028-44465147)
chr2 (202-339)||(22060401-22060539)
chr2 (185-338)||(16143502-16143654)
chr2 (225-337)||(7317392-7317504)
chr2 (185-336)||(472723-472873)
chr2 (236-338)||(35588128-35588230)
chr2 (202-338)||(44097273-44097411)
chr2 (225-338)||(6844042-6844155)
chr2 (218-335)||(15346868-15346985)
chr2 (202-338)||(44421264-44421400)
chr2 (225-338)||(15348383-15348496)
chr2 (225-338)||(34591726-34591838)
chr2 (252-338)||(18224817-18224903)
chr2 (232-336)||(6842718-6842822)
chr2 (232-316)||(9660868-9660952)
chr2 (253-337)||(40127242-40127326)
chr2 (245-336)||(44463569-44463658)
chr2 (232-338)||(8803252-8803359)
chr2 (253-338)||(28165659-28165745)
chr2 (261-338)||(22054335-22054412)
chr2 (253-338)||(43516399-43516484)
chr2 (253-338)||(43518050-43518135)
chr2 (253-345)||(10345120-10345212)
chr2 (204-336)||(13948523-13948654)
chr2 (204-336)||(14089730-14089861)
chr2 (270-338)||(20587040-20587108)
chr2 (261-338)||(22060141-22060218)
chr2 (244-336)||(37393892-37393985)
chr2 (253-338)||(40128900-40128985)
chr2 (277-338)||(44492308-44492369)
chr2 (270-338)||(20588449-20588517)
chr2 (253-336)||(28167303-28167386)
chr2 (202-268)||(44095426-44095492)
chr2 (256-338)||(44819770-44819852)
chr2 (282-338)||(44820932-44820988)
chr2 (232-271)||(169237-169276)
chr2 (277-336)||(18161040-18161099)
chr2 (227-336)||(9109008-9109117)
chr2 (185-259)||(44419885-44419958)
chr2 (281-338)||(10343989-10344046)
chr2 (282-338)||(28563957-28564013)
chr2 (289-337)||(42928937-42928985)
[»] chr4 (57 HSPs)
chr4 (202-338)||(19994499-19994635)
chr4 (202-338)||(19995976-19996112)
chr4 (202-338)||(44251606-44251742)
chr4 (202-338)||(55948875-55949011)
chr4 (202-338)||(44253114-44253250)
chr4 (202-338)||(48713384-48713520)
chr4 (218-336)||(22309076-22309194)
chr4 (204-337)||(10337106-10337239)
chr4 (202-338)||(18597633-18597769)
chr4 (202-338)||(32082555-32082691)
chr4 (202-338)||(42889733-42889868)
chr4 (202-338)||(42977199-42977335)
chr4 (202-338)||(55947361-55947497)
chr4 (235-338)||(24919053-24919156)
chr4 (202-345)||(42978841-42978984)
chr4 (217-338)||(54123482-54123603)
chr4 (220-331)||(9561854-9561965)
chr4 (218-338)||(22307672-22307792)
chr4 (225-336)||(33607471-33607582)
chr4 (219-336)||(54534981-54535098)
chr4 (227-345)||(21354723-21354842)
chr4 (202-336)||(38157023-38157157)
chr4 (108-337)||(48711860-48712089)
chr4 (202-337)||(53355100-53355237)
chr4 (202-336)||(10338090-10338226)
chr4 (202-338)||(54121826-54121964)
chr4 (202-336)||(54536618-54536753)
chr4 (232-325)||(9563287-9563380)
chr4 (232-338)||(33609294-33609402)
chr4 (168-338)||(25351689-25351855)
chr4 (202-337)||(3068926-3069061)
chr4 (281-338)||(18597855-18597912)
chr4 (220-338)||(39654614-39654730)
chr4 (253-338)||(4906130-4906215)
chr4 (249-336)||(55017743-55017831)
chr4 (253-338)||(4931999-4932084)
chr4 (253-338)||(55019330-55019415)
chr4 (284-338)||(4907465-4907519)
chr4 (284-338)||(4933335-4933389)
chr4 (284-338)||(29756273-29756327)
chr4 (282-338)||(29757610-29757666)
chr4 (270-338)||(39929344-39929412)
chr4 (282-337)||(35786682-35786737)
chr4 (253-338)||(2671542-2671628)
chr4 (253-338)||(11148351-11148436)
chr4 (253-338)||(34538127-34538212)
chr4 (202-319)||(16879174-16879295)
chr4 (253-337)||(22674154-22674238)
chr4 (285-341)||(23702395-23702451)
chr4 (282-338)||(23703865-23703921)
chr4 (236-311)||(25350524-25350600)
chr4 (288-336)||(39665274-39665322)
chr4 (270-338)||(39927934-39928002)
chr4 (238-318)||(44445084-44445164)
chr4 (108-150)||(10337996-10338038)
chr4 (282-340)||(35785164-35785222)
chr4 (279-335)||(7499360-7499416)
[»] chr1 (66 HSPs)
chr1 (202-338)||(16673178-16673314)
chr1 (202-338)||(7655186-7655322)
chr1 (202-336)||(50316972-50317106)
chr1 (202-338)||(28920577-28920713)
chr1 (202-338)||(28919084-28919220)
chr1 (202-338)||(33257882-33258017)
chr1 (202-338)||(33259294-33259430)
chr1 (202-338)||(33278054-33278189)
chr1 (202-338)||(33279453-33279589)
chr1 (202-338)||(36145345-36145481)
chr1 (202-334)||(24438869-24439002)
chr1 (202-338)||(7653687-7653823)
chr1 (168-336)||(13211001-13211168)
chr1 (202-331)||(36146834-36146962)
chr1 (202-338)||(7185778-7185914)
chr1 (185-338)||(22684056-22684208)
chr1 (202-338)||(41668274-41668410)
chr1 (202-338)||(50315319-50315455)
chr1 (199-338)||(24437075-24437214)
chr1 (202-328)||(19057789-19057915)
chr1 (216-338)||(33981505-33981627)
chr1 (203-338)||(19249321-19249455)
chr1 (232-338)||(18309086-18309192)
chr1 (243-336)||(44268891-44268984)
chr1 (202-337)||(19251084-19251219)
chr1 (202-331)||(13209582-13209712)
chr1 (245-338)||(7184324-7184417)
chr1 (225-338)||(46604440-46604552)
chr1 (225-338)||(31321010-31321121)
chr1 (277-338)||(16592022-16592083)
chr1 (238-336)||(7001201-7001298)
chr1 (202-275)||(16672719-16672792)
chr1 (282-341)||(9626466-9626525)
chr1 (253-338)||(28251932-28252017)
chr1 (277-338)||(44269071-44269132)
chr1 (253-338)||(52793705-52793790)
chr1 (282-338)||(8323441-8323497)
chr1 (282-338)||(31815772-31815828)
chr1 (270-338)||(46652771-46652839)
chr1 (232-307)||(3892960-3893035)
chr1 (292-343)||(10708026-10708077)
chr1 (202-340)||(35973196-35973341)
chr1 (270-336)||(40767618-40767684)
chr1 (253-338)||(9627554-9627639)
chr1 (202-332)||(3894084-3894211)
chr1 (282-338)||(8322522-8322578)
chr1 (282-338)||(31809990-31810046)
chr1 (284-338)||(26734427-26734481)
chr1 (281-338)||(12095878-12095935)
chr1 (259-338)||(13229252-13229332)
chr1 (282-338)||(32847815-32847871)
chr1 (202-241)||(1969645-1969684)
chr1 (277-340)||(31027224-31027287)
chr1 (261-336)||(42300457-42300531)
chr1 (253-316)||(43882078-43882140)
chr1 (270-333)||(46651367-46651430)
chr1 (249-336)||(14095721-14095812)
chr1 (287-337)||(33485329-33485379)
chr1 (287-345)||(35381378-35381436)
chr1 (105-147)||(41925311-41925353)
chr1 (281-338)||(12097941-12097998)
chr1 (277-338)||(13222915-13222976)
chr1 (253-338)||(33753636-33753721)
chr1 (278-338)||(10612128-10612188)
chr1 (282-338)||(11431331-11431387)
chr1 (282-338)||(42301622-42301678)
[»] chr8 (34 HSPs)
chr8 (110-338)||(1650039-1650268)
chr8 (218-338)||(3157975-3158095)
chr8 (202-338)||(25264341-25264477)
chr8 (218-338)||(39886014-39886134)
chr8 (202-338)||(25265827-25265963)
chr8 (225-338)||(39884617-39884730)
chr8 (202-338)||(33295368-33295503)
chr8 (237-338)||(22714006-22714107)
chr8 (202-341)||(2552405-2552543)
chr8 (202-337)||(5461936-5462071)
chr8 (202-338)||(33293940-33294077)
chr8 (202-339)||(15279555-15279692)
chr8 (202-339)||(15459924-15460061)
chr8 (227-338)||(26719386-26719497)
chr8 (232-338)||(26720201-26720306)
chr8 (225-328)||(2552699-2552800)
chr8 (232-338)||(45448442-45448550)
chr8 (258-338)||(17707426-17707506)
chr8 (252-338)||(17706166-17706252)
chr8 (282-338)||(357978-358034)
chr8 (265-345)||(27339171-27339251)
chr8 (252-338)||(36899899-36899986)
chr8 (252-338)||(36901149-36901235)
chr8 (253-341)||(21142477-21142566)
chr8 (202-338)||(2687106-2687244)
chr8 (238-337)||(31819051-31819150)
chr8 (284-338)||(359318-359372)
chr8 (253-343)||(7274624-7274714)
chr8 (253-338)||(27411213-27411298)
chr8 (202-326)||(27166778-27166902)
chr8 (232-284)||(27824484-27824535)
chr8 (253-340)||(37963273-37963360)
chr8 (261-338)||(61081-61158)
chr8 (253-302)||(27409799-27409848)
[»] chr6 (29 HSPs)
chr6 (205-341)||(19084045-19084181)
chr6 (202-345)||(1258361-1258505)
chr6 (202-338)||(8745433-8745569)
chr6 (217-337)||(8752737-8752857)
chr6 (202-338)||(1256715-1256851)
chr6 (202-338)||(2956157-2956293)
chr6 (225-338)||(1443418-1443531)
chr6 (232-337)||(10699891-10699996)
chr6 (225-338)||(10699231-10699344)
chr6 (225-338)||(10707677-10707786)
chr6 (227-338)||(4496506-4496615)
chr6 (218-337)||(4296344-4296462)
chr6 (202-338)||(7678565-7678705)
chr6 (202-292)||(19082713-19082803)
chr6 (232-336)||(33469751-33469856)
chr6 (253-338)||(19596344-19596429)
chr6 (253-338)||(19597950-19598035)
chr6 (225-338)||(28048981-28049096)
chr6 (253-338)||(842187-842272)
chr6 (253-338)||(19579893-19579978)
chr6 (282-338)||(11065656-11065712)
chr6 (253-346)||(12599890-12599983)
chr6 (282-338)||(7796750-7796806)
chr6 (284-338)||(843524-843579)
chr6 (236-283)||(10711872-10711919)
chr6 (261-336)||(30321145-30321220)
chr6 (235-338)||(10711224-10711324)
chr6 (253-302)||(28050335-28050384)
chr6 (282-338)||(19402124-19402180)
[»] scaffold1176 (1 HSPs)
scaffold1176 (202-338)||(2052-2188)
[»] scaffold1118 (1 HSPs)
scaffold1118 (202-331)||(2420-2549)
[»] scaffold0633 (1 HSPs)
scaffold0633 (217-338)||(6831-6952)
[»] scaffold0489 (2 HSPs)
scaffold0489 (205-338)||(6740-6873)
scaffold0489 (202-338)||(5376-5518)
[»] scaffold0280 (1 HSPs)
scaffold0280 (202-338)||(12132-12269)
[»] scaffold0672 (1 HSPs)
scaffold0672 (226-336)||(475-584)
[»] scaffold0129 (1 HSPs)
scaffold0129 (282-338)||(4259-4315)
[»] scaffold0512 (1 HSPs)
scaffold0512 (202-323)||(10048-10167)
[»] scaffold0018 (1 HSPs)
scaffold0018 (270-338)||(193592-193660)
[»] scaffold0524 (2 HSPs)
scaffold0524 (277-336)||(7701-7760)
scaffold0524 (270-338)||(9059-9127)
[»] scaffold0369 (1 HSPs)
scaffold0369 (270-345)||(8260-8335)
[»] scaffold0472 (1 HSPs)
scaffold0472 (270-338)||(10436-10504)
[»] scaffold0060 (1 HSPs)
scaffold0060 (282-338)||(13253-13309)


Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 108 - 451
Target Start/End: Complemental strand, 37132066 - 37131723
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgtttttgccatgtcatccttcgccacatcaacgactgttagacacgtaggcgttttttg 207  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  37132066 cctgtaatatagttagggatcatctgtcacgacacataagcgtttttgccatgtcatccttcgccacgtcaacggccgttagacacgtaggcgttttttg 37131967  T
Q  208 taacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||||||| |||||||||||| ||||||    
T  37131966 taacggaagttgacggaagggacgaaaaccaaaacgtttataacttacatgagttattttagaacaaaaaaagatacaggaacgaaaaccaaacacacgc 37131867  T
Q  308 gaacttacagggacgatttacatatttaagctttatttcgaggaaaaattgaacctttgtccaagctctaggagtccttacttgttaaagacaatggacg 407  Q
    ||||||||  |||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  37131866 gaacttacgtggacgatttacatatttaagctttattttgagggaaaactgaaactttgtccaagctctaggagtccttacttgttaaagacattggacg 37131767  T
Q  408 ttggtgcagtgtgaggtggagtccgagtgacaaggacgttggtg 451  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37131766 ttggtgcagtgtgaggtggagtccgagtgacaaggacgttggtg 37131723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 112 - 338
Target Start/End: Original strand, 37133481 - 37133707
Alignment:
Q  112 taatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgttttttgtaa 210  Q
    ||||||||| |||  |||||||||||  |||||||| |||||| |||||||||||||||||||| ||| |||| ||||||||| |||| ||||| |||||    
T  37133481 taatatagtcaggcttcatctgtcacaacacataagtgttttttgccatgtcatccttcgccacgtcagcgaccgttagacacataggtgtttt-tgtaa 37133579  T
Q  211 cggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaa 310  Q
    ||||| |||| || ||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  37133580 cggaaattgaagggaggaacgaaaaccaaaacgtttataacttccgggggttgttttagaacaaaaaaagatacagtgacgaaaaccaaaaacacgcgaa 37133679  T
Q  311 cttacagggacgatttacatatttaagc 338  Q
    ||||| ||||||||||||||||||||||    
T  37133680 cttacggggacgatttacatatttaagc 37133707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 108 - 338
Target Start/End: Complemental strand, 46245353 - 46245123
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||||||| ||||| ||| |  | ||||||||   ||||||||||     
T  46245353 cctgtaatatagtcagggatcatctgtcacgacacataagcgttttttgccacatcatcctttgccacgtcagccgccgttagacagcgaggcgttttt- 46245255  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  46245254 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacg 46245155  T
Q  307 cgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||  |||||||||||||||    
T  46245154 cgaacttacagggaccttttacatatttaagc 46245123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 45277889 - 45278025
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  45277889 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttaaaacaaaaaaagatacagggacgaaaaccaaaa 45277988  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  45277989 acacgccaaattacagggacgatttacatatttaagc 45278025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 40028594 - 40028460
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| |||||||||||  |||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  40028594 tttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 40028495  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| || |||||||||||||||||||||||||    
T  40028494 acacgccaaattacagggacgatttacatatttaa 40028460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 8231556 - 8231693
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| || |||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  8231556 tttttgtaacggaagttgacgggagtgacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaa 8231655  T
Q  302 acacgcgaacttacagggacgatttacatatttaagct 339  Q
    ||| || || ||||||||||||||||||||||||||||    
T  8231656 acaagccaaattacagggacgatttacatatttaagct 8231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 12180561 - 12180693
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  12180561 tttttgtaacagatgctgacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 12180660  T
Q  302 acacgcgaacttacagggacgatttacatattt 334  Q
    |||||||||||||||||||| ||| ||||||||    
T  12180661 acacgcgaacttacagggacaattaacatattt 12180693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 21716541 - 21716677
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  21716541 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacaaaaaaagatacagggacgaaaaccaaaa 21716640  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||||||| |||||||||||||||||||    
T  21716641 acacgccaaattacaggaacgatttacatatttaagc 21716677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 31392195 - 31392059
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||| ||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  31392195 tttttgtaacggaagttggcgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 31392096  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||  || |||||||||||||||||||||||||||    
T  31392095 acacgtcaaattacagggacgatttacatatttaagc 31392059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 31393581 - 31393717
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| |||||||||||  |||| |||  ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  31393581 tttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttacaggggttgttttataacaaaaaaagatacaaggacgaaaaccaaaa 31393680  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  31393681 acacgccaaattacagggacgatttacatatttaagc 31393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 8230207 - 8230071
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||  |||||||||||  |||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  8230207 tttttgtaacggaagttgacgagagggacgaaaataaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 8230108  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| | || |||||||||||||||||||||||||||    
T  8230107 acacaccaaattacagggacgatttacatatttaagc 8230071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 13420208 - 13420344
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||   |||||| |||||| |||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  13420208 tttttgtaacggattatgacggcagggactaaaaccaaaatgcttataacttacaggggttgttttagaacaaaaaaagatacagggactaaaaccaaaa 13420307  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||| | ||||||||||||||||    
T  13420308 acacgcaaacttacaggggccatttacatatttaagc 13420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 21715209 - 21715073
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||| |||||||| |||||| ||||||||||||||||||| |||||    
T  21715209 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagggattgttttaaaacaaaaaaagatacagggacgaaaatcaaaa 21715110  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  21715109 acacgccaaattacagggacgatttacatatttaagc 21715073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 40029951 - 40030087
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| || ||||||||||||||||| ||| ||||||||| |||||| ||||    
T  40029951 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttactaacttatagaggttgttttagaacaaaaaaatatacagggatgaaaacaaaaa 40030050  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  40030051 acacgccaaattacagggacgatttacatatttaagc 40030087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 45276546 - 45276411
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  45276546 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaa 45276447  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    || ||| || ||||| ||||||| |||||||||||||    
T  45276446 actcgccaaattaca-ggacgatctacatatttaagc 45276411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 46246497 - 46246633
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  46246497 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 46246596  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||  |||||||||||||||    
T  46246597 acacgcgaacttacagggaccttttacatatttaagc 46246633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 162 - 337
Target Start/End: Complemental strand, 14774688 - 14774515
Alignment:
Q  162 catccttcgccacatcaacgactgttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggt 261  Q
    ||||||||||||  ||| | ||| |||||||| | ||||||||| ||||||||||||||||| ||||||||||| ||||| |||  |||||| |||||||    
T  14774688 catccttcgccatgtcagccactattagacactttggcgttttt-gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggt 14774590  T
Q  262 tgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||||||||||| || |||||| |||||||||| ||||||| |||||||||| ||||| |||||||||||||||    
T  14774589 tgttttagaacaaa-aatgatacacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaag 14774515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 162 - 337
Target Start/End: Complemental strand, 15225141 - 15224968
Alignment:
Q  162 catccttcgccacatcaacgactgttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggt 261  Q
    ||||||||||||  ||| | ||| |||||||| | ||||||||| ||||||||||||||||| ||||||||||| ||||| |||  |||||| |||||||    
T  15225141 catccttcgccatgtcagccactattagacactttggcgttttt-gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggt 15225043  T
Q  262 tgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||||||||||| || |||||| |||||||||| ||||||| |||||||||| ||||| |||||||||||||||    
T  15225042 tgttttagaacaaa-aatgatacacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaag 15224968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 110 - 338
Target Start/End: Complemental strand, 15135607 - 15135380
Alignment:
Q  110 tgtaatatagttagggatcatctgtcacgtcacataag-cgtttttgccatgtcatccttcgccacatcaacgactgttagacacgtaggcgttttttgt 208  Q
    ||||||||||||| ||||||| ||||||| |||||||| | |||||||||  |||||||||||||| ||| |  | ||||||||| | ||||||||| ||    
T  15135607 tgtaatatagttaaggatcatttgtcacgacacataagacttttttgccacatcatccttcgccacgtcagccgccgttagacactttggcgttttt-gt 15135509  T
Q  209 aacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcg 308  Q
    |||  |||||||||| ||||||||||| ||||| |||  |||||| ||||||||||||||||| ||| ||  |||||| || |||||| ||||||| |||    
T  15135508 aacaaaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaataaa-aataatacagtgaagaaaacaaaaaacaagcg 15135410  T
Q  309 aacttacagggacgatttacatatttaagc 338  Q
    ||||||||   |||||||||||||||||||    
T  15135409 aacttacataaacgatttacatatttaagc 15135380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 11671208 - 11671342
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||  ||||||||||| |||||| ||| |||||||||||| ||||||||||||||| | ||||||| |||||||||| ||||    
T  11671208 tttttgtaacagatgctgacgagagggacgaaaatcaaaacatttgtaacttacagggtttgttttagaacaaaaatagatacatggacgaaaacaaaaa 11671307  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||||||||| ||||||||||||||||||||    
T  11671308 acacgcgaacttacggggacgatttacatatttaa 11671342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 185 - 338
Target Start/End: Complemental strand, 12178636 - 12178484
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatac 284  Q
    ||||||||| |  ||||||||| |||| |||||| |||  |||||| |||||||||| ||| | ||||||||| | ||||||||||||||| ||||||||    
T  12178636 gttagacacatcagcgtttttt-taacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagagtttgttttagaacaaaaaaagatac 12178538  T
Q  285 agggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  12178537 agggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaagc 12178484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 202 - 343
Target Start/End: Original strand, 32882637 - 32882777
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||||||||||||||| ||||| ||   ||||||| | ||||||||||||||||||  || ||||| |||| ||||||||||    
T  32882637 tttttgtaacggaagttgacggaagggacgaaaatcaaaaagtcattaacttataagggttgttttagaacaaaagaatatacatggacaaaaaccaaaa 32882736  T
Q  302 acacgcgaacttacagggacgatttacatatttaagctttat 343  Q
    ||| || || ||||||||||||||||||||||||||| ||||    
T  32882737 acatgc-aaattacagggacgatttacatatttaagccttat 32882777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 338
Target Start/End: Complemental strand, 37348856 - 37348736
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| | |||| ||||||||||||||||||||||||| || ||||||||||||||| || |||| |||||| |||||||||||||||||||||||| |    
T  37348856 tgacggcatggactaaaaccaaaacgtttataacttacaaggattgttttagaacaaaaaatgatatagggactaaaaccaaaaacacgcgaacttacgg 37348757  T
Q  318 ggacgatttacatatttaagc 338  Q
    |||| ||||||| ||||||||    
T  37348756 ggaccatttacaaatttaagc 37348736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 4675719 - 4675840
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| || ||||||||||||||||| ||||||||| ||||||||| |||||    
T  4675719 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagtggttgttttagaacaaa-aaagatacatggacgaaaatcaaaa 4675817  T
Q  302 acacgcgaacttacagggacgat 324  Q
    |||||| || |||||||||||||    
T  4675818 acacgccaaattacagggacgat 4675840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 108 - 333
Target Start/End: Complemental strand, 11747623 - 11747398
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagc-gtttttgccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||| |||||||| ||| |  | ||||||||| | |||| |||||    
T  11747623 cctgtaatatagttagggatcatctgtcacgacacataagcggtttttgccacatcatcattcgccacgtcagccgccgttagacactttggcg-ttttt 11747525  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||| ||||| ||||||| ||| |||||  ||  ||||||   || |||||||||  ||||| |  |||||||||| |||||| |||||| ||    
T  11747524 gtaacggaagtagacgggagggacggaaatcaaaaaattattaacttgttggagttgttttaagacaaaaagggatacagggatgaaaacaaaaaacgcg 11747425  T
Q  307 cgaacttacagggacgatttacatatt 333  Q
    |||| |||| |||| | ||||||||||    
T  11747424 cgaatttaccgggatggtttacatatt 11747398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 21017733 - 21017838
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacata 331  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| | || |||||  ||||||| |||||||    
T  21017733 aaaaccaaaatgtttataacttacaggggttgttttagaacaaa-aaagatacagggacgaaaaccgaaaacccacgtacttagtgggacgaattacata 21017831  T
Q  332 tttaagc 338  Q
    |||||||    
T  21017832 tttaagc 21017838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 11669978 - 11669842
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||||||| |||  |||||| |||| ||||| ||| | |||||||||||   ||||||||||||| |||  |||| |||||||||||||||    
T  11669978 tttttgtaacggaagttaacgttagggactaaaatcaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacatggacgaaaaccaaaa 11669879  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||| ||||||||||||||||  |||||||||||||||    
T  11669878 acatgcgaacttacagggaccgtttacatatttaagc 11669842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 15136862 - 15136997
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| |||||||||||  |||| ||||| ||||| |||  |||||| || |||||||||||||||||| |||||| || ||||||||| |||||    
T  15136862 tttttttaacagaagttgacggg-gggatgaaaatcaaaaagttattaacttgcaagggttgttttagaacaaaaaaagattcaaggacgaaaatcaaaa 15136960  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  15136961 acacgcgaatttacagggacgatttatatatttaagc 15136997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 37350139 - 37350260
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa---gatacagggacgaaaaccaaaaacacgcgaactta 314  Q
    |||||| |||||| |||||||||| | |||||||||| |||||||||||||||||||| |||   |||||| || | |||||||||||||||||||||||    
T  37350139 tgacggcagggactaaaaccaaaatgcttataacttataggggttgttttagaacaaaaaaaaaagatacatgggctaaaaccaaaaacacgcgaactta 37350238  T
Q  315 cagggacgatttacatatttaa 336  Q
    | ||||| ||||||||||||||    
T  37350239 cggggaccatttacatatttaa 37350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 32881253 - 32881119
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||||||||| || ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| ||||||||| | || ||||| ||||    
T  32881253 tttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacatgaactaaaacaaaaa 32881154  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    | | || || ||||| | || ||||||||||||||    
T  32881153 atatgccaaattacaagaacaatttacatatttaa 32881119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 225 - 336
Target Start/End: Complemental strand, 21016349 - 21016238
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||| | |||||||||||||||| | | |||||||||||||||| | ||||||| |||| |||| ||||||||||| |||||| |||||||||    
T  21016349 agggaccaaaagcgaaacgtttataacttagatgagttgttttagaacaaaaatagatacatggacaaaaaacaaaaacacgcaaacttatagggacgat 21016250  T
Q  325 ttacatatttaa 336  Q
    | ||||||||||    
T  21016249 tcacatatttaa 21016238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 706830 - 706744
Alignment:
Q  252 ttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| |||||||||||||||||| |||  ||||||||| |||||||||||||||| || ||||||||||  |||||||||||||||    
T  706830 ttacaagggttgttttagaacaaaaaaacttacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagc 706744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 708080 - 708210
Alignment:
Q  208 taacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgc 307  Q
    ||||||||  |||||| ||||||||   |||||| ||||  || ||||| |||||||||||||||||| |||  |||| |||| ||||||||||||||||    
T  708080 taacggaacctgacggcagggacgatttccaaaaggtttcgaaattacaagggttgttttagaacaaaaaaacttacatggactaaaaccaaaaacacgc 708179  T
Q  308 gaacttacagggacgatttacatatttaagc 338  Q
     || ||||||||||  |||||||||||||||    
T  708180 taaattacagggaccttttacatatttaagc 708210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 109 - 338
Target Start/End: Original strand, 31734584 - 31734812
Alignment:
Q  109 ctgtaatatagttagggatcatctgtcacgtcacataagcgtttt-tgccatgtcatccttcgccacatcaacgactgttagacacgtaggcgttttttg 207  Q
    |||||||||||| ||||||| | ||||||| ||||||||| |||| |||||  ||||||||||||||| || |    ||| ||||  | | | ||||||     
T  31734584 ctgtaatatagtcagggatcgtttgtcacgacacataagcattttctgccacatcatccttcgccacaccagccgtcgtttgacaatttgtc-tttttta 31734682  T
Q  208 taacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgc 307  Q
    | |||||||||||||| ||| ||||||| |||||  ||  ||||||  ||| |||| ||||||||||| ||| | | | | || ||||||||||||||||    
T  31734683 ttacggaagttgacgggaggaacgaaaatcaaaaatttattaacttgtaggtgttgctttagaacaaaaaaaaa-atatgaacaaaaaccaaaaacacgc 31734781  T
Q  308 gaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||||||||||| |||||||    
T  31734782 gaacttacaaggacgatttacatgtttaagc 31734812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 41593176 - 41593261
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||| |||  ||||||||| |||||||||||  | ||||||||||||||| ||||||||||||||||    
T  41593176 tacagggtttgttttagaacaaaaaaacttacagggaccaaaaccaaaaatgcacgaacttacagggaccatttacatatttaagc 41593261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 3704510 - 3704399
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaac-----aaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgattt 326  Q
    ||||| ||||||||||||||||||| ||  ||||||| ||      ||| ||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  3704510 aaaactaaaacgtttataacttacaaggtctgttttaaaaataaataaaaaaagataaagggacgaaaaccaaaaacaagcgaacttacatggacgattt 3704411  T
Q  327 acatatttaagc 338  Q
    || |||||||||    
T  3704410 acctatttaagc 3704399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 338
Target Start/End: Original strand, 30792767 - 30792894
Alignment:
Q  217 ttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaata----aagatacagggacgaaaac--caaaaacacgcgaa 310  Q
    ||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||| ||| |    |||||||| ||| ||||||   |||||||||| ||    
T  30792767 ttgacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttagaagaaaaaaaataagatacatggaagaaaacaaaaaaaacacgccaa 30792866  T
Q  311 cttacagggacgatttacatatttaagc 338  Q
     |||||| | ||||||||||||||||||    
T  30792867 attacagagtcgatttacatatttaagc 30792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 41384235 - 41384145
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttat 343  Q
    ||||||| |||||||| |||||| |||  ||||||||| ||||| |||||  |||||||||||| |||| |||||||||||||||| ||||    
T  41384235 tacagggtttgttttaaaacaaaaaaacttacagggaccaaaacaaaaaatgcgcgaacttacaaggaccatttacatatttaagccttat 41384145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 338
Target Start/End: Original strand, 14781911 - 14782066
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaa-accaaaacgtttataacttacaggggttgttttagaac--aaataaaga 281  Q
    ||||||||| | |||||||||| |||| ||||||||||  |||||||||| | ||||| ||| |||| || || | ||||||||||||   ||| |||||    
T  14781911 gttagacactttggcgtttttt-taacagaagttgacgagagggacgaaatatcaaaaagttaataatttgcacgagttgttttagaaagaaaaaaaaga 14782009  T
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    || ||||||||| |  ||||||||||||||||| | || || |||||||||||||||    
T  14782010 tatagggacgaagaaaaaaaacacgcgaacttagatgggcgctttacatatttaagc 14782066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 338
Target Start/End: Original strand, 15231944 - 15232099
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaa-accaaaacgtttataacttacaggggttgttttagaac--aaataaaga 281  Q
    ||||||||| | |||||||||| |||| ||||||||||  |||||||||| | ||||| ||| |||| || || | ||||||||||||   ||| |||||    
T  15231944 gttagacactttggcgtttttt-taacagaagttgacgagagggacgaaatatcaaaaagttaataatttgcacgagttgttttagaaagaaaaaaaaga 15232042  T
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    || ||||||||| |  ||||||||||||||||| | || || |||||||||||||||    
T  15232043 tatagggacgaagaaaaaaaacacgcgaacttagatgggcgctttacatatttaagc 15232099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 38758290 - 38758375
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| |||||||||   |||||| |||||||||||||| |||||||||||| ||| |||||||||||||  ||||| |||||||||    
T  38758290 tacaagggttgtttcgcaacaaaaaaagatacagggactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaagc 38758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 41591601 - 41591516
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| || |||||||||||| |||  ||||||||||||||| |||||  |||||| ||||||||||  |||||||||||||||    
T  41591601 tacagggtttcttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagc 41591516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 25008161 - 25008093
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| |||||||||||||||    
T  25008161 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagc 25008093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 43546652 - 43546788
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||| |||| |||| |||||||||   ||||  | |  ||||||||| || |  ||||| |||||| ||| ||||||||||||    |||||    
T  43546652 tttttgtaacgggagttaacgggagggacgaattgcaaacggctagtaacttacaaggatgattttaaaacaaaaaaaaatacagggacgatttgcaaaa 43546751  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  43546752 acacgcgaaattacagggacgttttacatatttaagc 43546788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 28556333 - 28556247
Alignment:
Q  252 ttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| |||||||||||||||||| |||  ||||| ||| |||||||||||||||| || ||||||  ||  |||||||||||||||    
T  28556333 ttacaagggttgttttagaacaaaaaaacttacagagactaaaaccaaaaacacgctaaattacagataccttttacatatttaagc 28556247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 27161968 - 27162053
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||| |   |||||| |||  |||| ||||||||||||||| | |||||||||||||||||  |||||||||||||||    
T  27161968 tacaggggttgtctcgcaacaaaaaaacttacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacatatttaagc 27162053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 28848620 - 28848559
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||    |||||||||||||| ||||||||||| |||||||||||||||    
T  28848620 aaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagc 28848559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 25009475 - 25009543
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| |||||||||| ||||    
T  25009475 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatattaaagc 25009543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 41385811 - 41385867
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||| |||||  ||||||||||||||||| ||||||||||||||||    
T  41385811 tacagggaccaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaagc 41385867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 21914635 - 21914696
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||||||||| | || ||||||||||| ||| ||||| |||||    
T  21914635 aaagatatagggacgaaaaccaaaaacacaccaaattacagggacggtttgcatatgtaagc 21914696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 27160391 - 27160306
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||| ||  |||||| |||  |||||||||||||||||||| | | |||||||||| ||||  ||||| |||||||||    
T  27160391 tacaggggttgtcttgcaacaaaaaaacttacagggacgaaaaccaaaatctcacgaacttacaaggaccttttacttatttaagc 27160306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 38756717 - 38756656
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||  |||  ||||||||||    
T  38756717 aaagatacagggactaaaaccaaaaacgcgctaacttacagggacctttttaatatttaagc 38756656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 28849958 - 28850026
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| ||| |||||| ||||    
T  28849958 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaagttacagggacgttttgcatattaaagc 28850026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 32429872 - 32429928
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| |||||||||||| ||| |||||||||||||  ||||| |||||||||    
T  32429872 tacagggactaaaaccaaaaacgcgccaacttacagggactttttacttatttaagc 32429928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 43545411 - 43545343
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| ||| |||||| ||||    
T  43545411 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttgcatattaaagc 43545343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 20208461 - 20208522
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| |||||| |||| ||||||||| | ||||||||||||   |||||||||||||||    
T  20208461 aaagatagagggactaaaagcaaaaacacaccaacttacagggatcttttacatatttaagc 20208522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 3698815 - 3698874
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||||| ||||| ||||| || ||||||||||| ||||||||| |||||| ||||||||    
T  3698815 aaagataccgggacaaaaac-aacaacacgcgaacctacagggacaatttacctatttaag 3698874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 28099041 - 28098949
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||| ||||||||||||| ||||| ||  || |||||||||||| |||||||||  | ||||||| |||||  | ||||||||  ||||||||    
T  28099041 aaaagcaaaacgtttatagcttacgggatttattttagaacaaaaaaagatacataggcgaaaacaaaaaatgcacgaacttattgggacgat 28098949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 3e-64; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 108 - 343
Target Start/End: Original strand, 40499080 - 40499315
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||||||| ||||| ||| |  | ||||||||   ||||||||| |    
T  40499080 cctgtaatatagtcagggatcatctgtcacgacacataagcgttttttgccacatcatcctttgccacgtcagccgccgttagacagcgaggcgtttt-t 40499178  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||  |||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  40499179 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttaccggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacg 40499278  T
Q  307 cgaacttacagggacgatttacatatttaagctttat 343  Q
    |||||||||||||||  ||||||||||||||| ||||    
T  40499279 cgaacttacagggaccttttacatatttaagccttat 40499315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 108 - 338
Target Start/End: Original strand, 31796662 - 31796892
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||  |||||||| ||||  |||    | ||||||||   ||||||||| |    
T  31796662 cctgtaatatagtcagggatcatctgtcacgacacatcagcgttttttgccacatcatcctttgccatgtcagtcgccgttagacagtgaggcgtttt-t 31796760  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  31796761 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacg 31796860  T
Q  307 cgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||  |||||||||||||||    
T  31796861 cgaacttacagggaccttttacatatttaagc 31796892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 108 - 338
Target Start/End: Original strand, 48568358 - 48568588
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||||||  ||||| ||||  |||||||| |||||  || |    |||||||| | ||||||||| |    
T  48568358 cctgtaatatagtcagggatcatctgtcacgacacataagaattttttgccacatcatcctttgccacgacatccgtcgttagacagggaggcgtttt-t 48568456  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  48568457 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaaatacggggacgaaaaccaaaaacacg 48568556  T
Q  307 cgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||| |||  |||||||||||||||    
T  48568557 cgaacttacagagaccttttacatatttaagc 48568588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 108 - 338
Target Start/End: Original strand, 41083099 - 41083329
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||||||| ||||  |||    | || |||||   ||||||||| |    
T  41083099 cctgtaatatagtcagggatcatctgtcacgacacataagcgttttttgccacatcatcctttgccatgtcagtcgccgt-agacagtgaggcgtttt-t 41083196  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaac-aaataaagatacagggacgaaaaccaaaaacac 305  Q
    ||||||||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  41083197 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaagatacggggacgaaaaccaaaaacac 41083296  T
Q  306 gcgaacttacagggacgatttacatatttaagc 338  Q
    || |||||||||||||  |||||||||||||||    
T  41083297 gcaaacttacagggaccttttacatatttaagc 41083329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 53528107 - 53527971
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  53528107 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggagttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 53528008  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||| |||||||||||||| ||||||||    
T  53528007 acacgccaaattaaagggacgatttacacatttaagc 53527971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 33734424 - 33734558
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||||||||| || ||||||||||| ||||| |||  |||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  33734424 tttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacaggaaccaaaaccaaaa 33734523  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| || |||||||||||||||||||||||||    
T  33734524 acacgctaaattacagggacgatttacatatttaa 33734558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 33733102 - 33732966
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| | ||||||||| ||||| |||  ||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||    
T  33733102 tttttgtaacggaagttgacgggaaggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaaaatacaggaacgaaaaccaaaa 33733003  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  33733002 acacgccaaattacagggacgatttacatatttaagc 33732966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 41081939 - 41081803
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  41081939 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 41081840  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||  |||||||||||||||    
T  41081839 acacgcgaacttacagggaccttttacatatttaagc 41081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 53529456 - 53529592
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| ||||| | |||||||||||| |||||||||||||||||||| ||||    
T  53529456 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggctattttagaacaaaaaaagatacagggacgaaaactaaaa 53529555  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    | |||| || |||||||||||||||||||||||||||    
T  53529556 atacgccaaattacagggacgatttacatatttaagc 53529592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 201 - 336
Target Start/End: Complemental strand, 22942476 - 22942339
Alignment:
Q  201 ttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagata--cagggacgaaaacca 298  Q
    ||||||||||| || | ||||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||| ||| |||  |||||| ||||||||    
T  22942476 ttttttgtaacagatgatgacggatgggaccaaaaccaaaacgtttataacttacataggttgttttagaacaaaaaaaaatatacagggatgaaaacca 22942377  T
Q  299 aaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| |||||||||||||||||||||||||||||||    
T  22942376 aaaacaagcgaacttacagggacgatttacatatttaa 22942339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 30700433 - 30700299
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| |||||| |||| ||||| |||||||||||||||||  |||||||||||||| ||||||||| |||||||||||||||    
T  30700433 tttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataacttacagggtgtgttttagaacaaaaaaagatacaaggacgaaaaccaaaa 30700334  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||||||| || ||||||||||||||||||    
T  30700333 acacgcgaacttaaagagacgatttacatatttaa 30700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 41880036 - 41879927
Alignment:
Q  227 ggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgattt 326  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||  |||||||    
T  41880036 ggacgaaaatcaaaacgtttataacttacaaggtttgttttagaacaaaaaaagatacagagacgaaaaccaaaaacacacgaacttacagaaacgattt 41879937  T
Q  327 acatatttaa 336  Q
    ||||||||||    
T  41879936 acatatttaa 41879927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 31795510 - 31795374
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  31795510 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggccgaaaaccaaaa 31795411  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||  ||||| |||||||||    
T  31795410 acacgcgaacttacagggaccttttacgtatttaagc 31795374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 48567133 - 48566997
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  48567133 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagtgacgaaaaccaaaa 48567034  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| |||||||||||||  |||||||||||||||    
T  48567033 acacgcaaacttacagggaccttttacatatttaagc 48566997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 202 - 345
Target Start/End: Complemental strand, 31657091 - 31656947
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaaga-tacagggacgaaaaccaaa 300  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  |||||||||||| ||||||||||||||| ||| | |||| ||||||||||||||    
T  31657091 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacagggattgttttagaacaaaaaaaaaatacaaggacgaaaaccaaa 31656992  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    |||| || || ||||||||||||||||||||||||| | ||||||    
T  31656991 aacatgccaaattacagggacgatttacatatttaatccttattt 31656947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 32559034 - 32558920
Alignment:
Q  225 agggacgaaaaccaaaacgtttataa-cttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacga 323  Q
    |||||| |||||||||| ||| | || ||||||| | ||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||      
T  32559034 agggactaaaaccaaaaagttaacaaacttacagagtttgttttcgaacaaaaaaagttacagggacgaaaacaaaaaacacgcgaacttacagggacct 32558935  T
Q  324 tttacatatttaagc 338  Q
    |||||||||||||||    
T  32558934 tttacatatttaagc 32558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 32614022 - 32613884
Alignment:
Q  199 cgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaacca 298  Q
    ||||||||| ||| |||||| |||  |||||| |||||||||| ||| | ||||||||||| || |||||||||||| |||  |||||||||||||||||    
T  32614022 cgttttttg-aacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagggtttattttagaacaaaaaaac-tacagggacgaaaacca 32613925  T
Q  299 aaaacacgcgaac-ttacagggacgatttacatatttaagc 338  Q
    ||||||||||||| ||||| ||||  |||||||||||||||    
T  32613924 aaaacacgcgaactttacaaggaccttttacatatttaagc 32613884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 345
Target Start/End: Original strand, 32615567 - 32615711
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaa 300  Q
    ||||| ||||||||||| |||  |||||| |||| ||||| ||| | |||||||| |  ||||||||||||||| ||| | ||||||||| ||||| |||    
T  32615567 tttttttaacggaagtttacgttagggactaaaatcaaaaagttaacaacttacatgatttgttttagaacaaaaaaaagttacagggacaaaaacaaaa 32615666  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    |||||||||||||||||||||  ||||||||||||| | ||||||    
T  32615667 aacacgcgaacttacagggaccttttacatatttaaaccttattt 32615711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 30701806 - 30701898
Alignment:
Q  245 ttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||| |   |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||   |||||||||||||||||    
T  30701806 ttataacttacatgatctgttttagaacaaaaaaagatacagg-acgaaaaccaaaaacacgcgaacttaaaggagtgatttacatatttaagc 30701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 32559803 - 32559941
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaaga--tacagggacgaaaaccaa 299  Q
    ||||| ||||||||||| |||  | | || ||||| |||| ||| | |||||||| || ||||||||||||||| ||| |  |||||||| |||||  ||    
T  32559803 tttttttaacggaagtttacgttatgaactaaaactaaaaagttaacaacttacaaggtttgttttagaacaaaaaaaaagttacagggatgaaaataaa 32559902  T
Q  300 aaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||| |||  |||||||||||||||    
T  32559903 aaacacgcgaacttacagagaccttttacatatttaagc 32559941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 31017667 - 31017799
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||  |||||| |||| |||||  || | |||||||||   || |||||||||||| ||| ||||| | |||||||||||||    
T  31017667 tttttttaacagaagttgacgttagggaccaaaatcaaaaaattaacaacttacagatattattttagaacaaaaaaa-atacaagaacgaaaaccaaaa 31017765  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
     ||||||||||||||  ||||||||||||||||||    
T  31017766 -cacgcgaacttacacagacgatttacatatttaa 31017799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 44458732 - 44458590
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||||||| |||  |||||| ||||  |||| ||| | ||||||||||     |||||||||||| |||  |||| ||||||||| ||| |    
T  44458732 tttttgtaacggaagttaacgttagggactaaaattaaaaggttaacaacttacaggatcatttttagaacaaaaaaacttacaaggacgaaaatcaaga 44458633  T
Q  302 acacgcgaacttacagggacgatttacatatttaagctttatt 344  Q
    ||||  ||||||||||||||  ||||||||||||||| |||||    
T  44458632 acacatgaacttacagggactttttacatatttaagccttatt 44458590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 340
Target Start/End: Original strand, 8528291 - 8528404
Alignment:
Q  227 ggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgattt 326  Q
    |||| |||| |||||  |||| ||||||||||| |||| ||  ||||||| |||||||| || ||||||||||| ||||| ||||||||  |||||||||    
T  8528291 ggactaaaagcaaaatatttagaacttacagggtttgtattgcaacaaatgaagatacatgggcgaaaaccaaatacacgtgaacttacttggacgattt 8528390  T
Q  327 acatatttaagctt 340  Q
    |   ||||||||||    
T  8528391 aaccatttaagctt 8528404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 24613596 - 24613669
Alignment:
Q  264 ttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||||| ||| |||  ||||||||||||||| |||||  |||||||||||||||||  ||||||||||||||    
T  24613596 ttttagaaaaaaaaaacttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaag 24613669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 31199327 - 31199250
Alignment:
Q  261 ttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||| |||  |||||||||||||||| |||| ||||||| ||||||||||  |||||||||| ||||    
T  31199327 ttgttttaggacaaaaaaacttacagggacgaaaacctaaaatacgcgaaattacagggaccttttacatattcaagc 31199250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 3150009 - 3150077
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||| |||||||||| |||||||||||| ||  |||||||||||||  |||||||||||||||    
T  3150009 aacaaaaaaaaatacagggactaaaaccaaaaacgcgttaacttacagggaccttttacatatttaagc 3150077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 8391470 - 8391402
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||| ||||||    |||||||||||||| ||||||||||| |||||||||||||||    
T  8391470 aacaaaaaaagatacaaggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagc 8391402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 341
Target Start/End: Original strand, 27320670 - 27320757
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcttt 341  Q
    |||| |||||||||||||||||| |||  |||||| |||||||||||||| |||| || ||||||||||   |||| ||||||||||||    
T  27320670 tacaagggttgttttagaacaaaaaaacttacagg-acgaaaaccaaaaatacgctaaattacagggacctcttacgtatttaagcttt 27320757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 33780714 - 33780658
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| ||||| ||||||||||||||||||  ||||||| |||||||    
T  33780714 tacagggacgaaaacaaaaaatacgcgaacttacagggacattttacatttttaagc 33780658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 24612329 - 24612279
Alignment:
Q  288 gacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  24612329 gacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 24612279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 33781496 - 33781550
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||| |||||||||| |||||| |||||||||||||||||  |||||||||||||    
T  33781496 tacaaggacgaaaacaaaaaacgcgcgaacttacagggaccttttacatatttaa 33781550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 31200918 - 31201002
Alignment:
Q  253 tacaggggttgttttagaacaaataaagat-acagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||| ||||||||||||||| |||  | |||||||  ||||| |||||  ||||||||||||| ||| ||||||||||||||    
T  31200918 tacagggtttgttttagaacaaaaaaaacttacagggatcaaaacaaaaaatgcgcgaacttacagagaccatttacatatttaa 31201002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 45981476 - 45981408
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||| ||||||    |||||||||||||| ||||| ||||| |||||||||||||||    
T  45981476 aacaaaaaaagatacaaggacgatttgcaaaaacacgcgaaattacaaggacgttttacatatttaagc 45981408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 3026883 - 3026946
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    ||||||||| ||||||||||||  || |||||||||||||  ||||| ||||||||| ||||||    
T  3026883 tacagggactaaaaccaaaaacgtgccaacttacagggaccttttacttatttaagccttattt 3026946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 8392793 - 8392856
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatt 333  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| ||| ||||||    
T  8392793 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacggtttgcatatt 8392856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 41881575 - 41881631
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacagg 258  Q
    ||||||||||||||||| |||  |||||| |||||||||| ||| | ||||||||||    
T  41881575 tttttgtaacggaagttaacgttagggactaaaaccaaaaggttaacaacttacagg 41881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 45982789 - 45982857
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||| ||    |||||||| ||||| ||||||||||||||| |||||| ||||    
T  45982789 aacaaaaaaagatacagggatgatttgcaaaaacatgcgaaattacagggacgatttgcatattaaagc 45982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 46725269 - 46725325
Alignment:
Q  280 gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| |||||||   |||||||||||||||| ||||||||  |||||||||||||    
T  46725269 gatacaaggacgaattacaaaaacacgcgaactaacagggacattttacatatttaa 46725325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 1e-63; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 108 - 338
Target Start/End: Complemental strand, 38624947 - 38624717
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| || |||||||||||||| ||||||||||||||| ||||  |||||||| ||||||||| |  | ||||||||   ||||||||||     
T  38624947 cctgtaatatagtcagagatcatctgtcacgacacataagcgttttttgccacatcatcctttgccacatcagccgccgttagacagcgaggcgttttt- 38624849  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  38624848 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacg 38624749  T
Q  307 cgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||  |||||||||||||||    
T  38624748 cgaacttacagggaccttttacatatttaagc 38624717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 1418858 - 1418994
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  1418858 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaa 1418957  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||  || |||||||||||||||||||||||||||    
T  1418958 acacgtcaaattacagggacgatttacatatttaagc 1418994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 30332420 - 30332284
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||| | ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  30332420 tttttgtaacggaagttgacaggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaa 30332321  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    | |||| || |||||||||||||||||||||||||||    
T  30332320 atacgccaaattacagggacgatttacatatttaagc 30332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 202 - 337
Target Start/End: Original strand, 25916200 - 25916335
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| |||||||||||  |||| |||  ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  25916200 tttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaa 25916299  T
Q  302 acacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||| || ||||| ||||||||||||||||||||    
T  25916300 acacgccaaattacatggacgatttacatatttaag 25916335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 203 - 338
Target Start/End: Original strand, 30333930 - 30334065
Alignment:
Q  203 ttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaa 302  Q
    |||||||| |||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  30333930 ttttgtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaa 30334029  T
Q  303 cacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| || ||| |||||||| ||||||||||||||    
T  30334030 cacgccaaattatagggacgacttacatatttaagc 30334065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 17554925 - 17555062
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacg-aaaaccaaa 300  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||| ||||||||||||||||||||| ||  ||||||||||| |||||||||    
T  17554925 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaacaaaaaataatacagggacgaaaaaccaaa 17555024  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  17555025 aacacgcgaacttacatggacaatttacatatttaagc 17555062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 307
Target Start/End: Original strand, 11772528 - 11772727
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||||||| ||||| ||| |    ||||||||   ||| | ||||     
T  11772528 cctgtaatatagtcagggatcatctgtcacgacacataagcgttttttgccacatcatcctttgccacgtcagccgtcgttagacaatgaggtgctttt- 11772626  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||| | ||||||||||| ||||| |||  ||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  11772627 gtaacggaagttgacaggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacg 11772726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 218 - 338
Target Start/End: Original strand, 27756723 - 27756843
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| |||||| |||| ||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||    
T  27756723 tgacggcagggaccaaaagcaaaatgtttataatttacagggtttgttttagaacaaaaaaagatacagggacgaaaacaaaaaacacgcgaacttagag 27756822  T
Q  318 ggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||    
T  27756823 ggacgatttacatatttaagc 27756843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 185 - 338
Target Start/End: Complemental strand, 16308719 - 16308566
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gata 283  Q
    ||||||||| || |||||||| ||||| || | |||||| |||||| |||| || || | |||||||||||||||  |||||||||||||| ||| ||||    
T  16308719 gttagacacataagcgttttt-gtaacagatgatgacggtagggaccaaaagcacaaggcttataacttacagggtctgttttagaacaaaaaaaagata 16308621  T
Q  284 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16308620 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 16308566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 38626092 - 38626228
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  38626092 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaa 38626191  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||| ||||||||||||||||  |||||||||||||||    
T  38626192 acatgcgaacttacagggaccttttacatatttaagc 38626228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 8874196 - 8874332
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||  |||||| |||| ||||| |||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  8874196 tttttgtaacagagtttgacgagagggacaaaaagcaaaaagttattaacttacaggggttgttttagaacaaaaaaatatacagggacgaaaaccaaaa 8874295  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||| |  || |||||||||||||||||||||||||||    
T  8874296 acaggtcaaattacagggacgatttacatatttaagc 8874332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 345
Target Start/End: Complemental strand, 39101852 - 39101709
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  |||| ||||||||||||||||||||||| ||||| ||||  |||||||||||||    
T  39101852 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacatacaggggttgttttagaacaaaaaaagacacagaaacgaaaaccaaaa 39101753  T
Q  302 acacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    || | | || ||||||||||||||||||||||||||| ||||||    
T  39101752 acgcaccaaattacagggacgatttacatatttaagcattattt 39101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 202 - 340
Target Start/End: Original strand, 16310021 - 16310159
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| |||||| |||| ||||| |||||||||||||| ||  |||||||||||||| ||| ||| ||| |||||||||||||    
T  16310021 tttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataacttacaaggtctgttttagaacaaaaaaatatataggaacgaaaaccaaaa 16310120  T
Q  302 acacgcgaacttacagggacgatttacatatttaagctt 340  Q
    |||  |||||||||| |||||||||||||||||||||||    
T  16310121 acatacgaacttacatggacgatttacatatttaagctt 16310159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 36619682 - 36619546
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaa 300  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| | |  ||||||| |||||||||||||||||||| ||| |||||||||||||||| ||||    
T  36619682 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagctattaacttataggggttgttttagaacaaaaaaaagatacagggacgaaaatcaaa 36619583  T
Q  301 aacacgcgaacttacagggacgatttacatatttaag 337  Q
    ||||||| || ||| ||||||||||||||||||||||    
T  36619582 aacacgccaaattatagggacgatttacatatttaag 36619546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 8872633 - 8872522
Alignment:
Q  226 gggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatt 325  Q
    |||||||||| ||||| |||  |||||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||||| |    
T  8872633 gggacgaaaagcaaaaagttattaacttatgggggttgttttagaacaaaaaaagatacaggaacgaaaaccaaaaacacgccaaattacagggacgaat 8872534  T
Q  326 tacatatttaag 337  Q
    ||||||||||||    
T  8872533 tacatatttaag 8872522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 217 - 338
Target Start/End: Original strand, 39103348 - 39103469
Alignment:
Q  217 ttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttaca 316  Q
    ||||||| ||||||||||  ||||| |||  ||||||| | |||||||||||||||||| |||||||| || ||||||||||||||||||| || |||||    
T  39103348 ttgacgggagggacgaaacgcaaaaagttattaacttatacgggttgttttagaacaaaaaaagatactggaacgaaaaccaaaaacacgccaaattaca 39103447  T
Q  317 gggacgatttacatatttaagc 338  Q
     |||||||||||||||||||||    
T  39103448 aggacgatttacatatttaagc 39103469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 202 - 335
Target Start/End: Complemental strand, 28592214 - 28592081
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaaga-tacagggacgaaaaccaaa 300  Q
    |||||||||| |||||| |||  ||| || ||||||||||| ||||||||||||| || ||||||||||||||| ||| | ||||||||||||||  |||    
T  28592214 tttttgtaacagaagttaacgttaggaactaaaaccaaaacatttataacttacacgg-ttgttttagaacaaaaaaaaaatacagggacgaaaataaaa 28592116  T
Q  301 aacacgcgaacttacagggacgatttacatattta 335  Q
    |||||||||||||||| ||||  ||||||||||||    
T  28592115 aacacgcgaacttacaaggaccttttacatattta 28592081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 36621148 - 36621284
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  |||  |||| |||||||||||||||||| ||||||||  ||||||||||||||     
T  36621148 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaatgtacaagggttgttttagaacaaaaaaagatacgtggacgaaaaccaaag 36621247  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    || | | || ||||||| |||||||||||||||||||    
T  36621248 acgcaccaaattacaggaacgatttacatatttaagc 36621284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 25914627 - 25914493
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| |||||||||||  |||| |||  ||||| ||||||||||||||| |||||| |||||||||  |||| |||| ||||    
T  25914627 tttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaactaacaggggttgttttaaaacaaa-aaagatacaaagacggaaacaaaaa 25914529  T
Q  302 acacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||| || |||||   ||||||||| ||||||||    
T  25914528 acacgccaaattacattaacgatttacgtatttaag 25914493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 28803762 - 28803657
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacata 331  Q
    |||||||||||||||||||||||| | | ||||||||||||||| ||||||||| |||||||||  |||||||  |||||||||| | ||||||||| ||    
T  28803762 aaaaccaaaacgtttataacttacggtgtttgttttagaacaaa-aaagatacatggacgaaaataaaaaacatccgaacttacaagaacgatttaccta 28803664  T
Q  332 tttaagc 338  Q
    |||||||    
T  28803663 tttaagc 28803657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 18201309 - 18201405
Alignment:
Q  244 tttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctt 340  Q
    ||||||||||||||| |||||||   |||||| | ||||||| | |||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  18201309 tttataacttacaggagttgtttcgcaacaaaaacagatacaagaacgaaaacaaaaaacacgcaaacttacagggacaatttacatatttaagctt 18201405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 290
Target Start/End: Complemental strand, 1417545 - 1417459
Alignment:
Q  205 ttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttaca-ggggttgttttagaacaaataaagatacagggac 290  Q
    ||||||||||||||||||| |||||||||||  |||| |||  ||||||||| ||||||||||||||||||| ||||||||||||||    
T  1417545 ttgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttacagggggttgttttagaacaaaaaaagatacagggac 1417459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 11771335 - 11771201
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||| | ||||||||||  ||||| |||   ||||||||||| |||||||| || ||| ||||||||||||||||||| |||||    
T  11771335 tttttttaacagaagttgacagtagggacgaaattcaaaaagttatcaacttacagggtttgttttaaaaaaaaaaaagatacagggacgaaaatcaaaa 11771236  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| |||||||  | ||  |||||||||||||    
T  11771235 acacgcaaacttactcgaaccttttacatatttaa 11771201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 184 - 338
Target Start/End: Complemental strand, 17552126 - 17551970
Alignment:
Q  184 tgttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaa-accaaaacgtttataacttacaggggttgttttagaac-aaataaaga 281  Q
    |||||||| | | |||||||||| |||| ||||||||||  |||||||||| | ||||| |||  |||||| ||||| |||||||||||  ||| |||||    
T  17552126 tgttagaccctttggcgttttttttaacagaagttgacgagagggacgaaatatcaaaaagttattaacttgcagggattgttttagaaagaaaaaaaga 17552027  T
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    || ||||||||| |  ||||||||||||||||| | | ||| |||||||||||||||    
T  17552026 tatagggacgaagataaaaaacacgcgaacttagatgaacgctttacatatttaagc 17551970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 202 - 345
Target Start/End: Original strand, 37498817 - 37498959
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||| | |||||| |||| |||||||| |  | |||||| || |||||||  || ||| ||||||||| |||||||||||||||    
T  37498817 tttttgtaacagatgatgacagtagggaccaaaagcaaaacgtgtgcatcttacaaggtttgttttgcaataaaaaaagatacatggacgaaaaccaaaa 37498916  T
Q  302 acacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    ||||||||||||| |||| | |||||  |||||||| |||||||    
T  37498917 acacgcgaacttataggg-caatttaactatttaagttttattt 37498959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 33489872 - 33489957
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||   |||||| |||||||||||||| ||||| |||||| ||| |||||||||||||  ||||| |||||||||    
T  33489872 tacaggggttgtttcgcaacaaaaaaagatacagggactaaaacgaaaaacgcgctaacttacagggacattttacttatttaagc 33489957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 33084093 - 33084145
Alignment:
Q  264 ttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttaca 316  Q
    |||||||||||| ||||||||||||| ||||||||||||||| | ||||||||    
T  33084093 ttttagaacaaaaaaagatacagggatgaaaaccaaaaacacacaaacttaca 33084145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 35931321 - 35931405
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||||||||| | | |||||| |||  |||| ||||||||||||||| | |||||||||||||||||  ||||| ||||||||    
T  35931321 tacaggggttgtctcacaacaaaaaaacttacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacctatttaag 35931405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 38997458 - 38997344
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||| | |||| | |||||| |||| |||||| | || ||||||| ||| | |||||  ||| || ||||||| |||||||||||  ||||    
T  38997458 tttttgtaacggatgatgacagtagggaccaaaagcaaaacatctagaacttacggggttagttttgcaaccaaaaaagataaagggacgaaaataaaaa 38997359  T
Q  302 acacgcgaacttaca 316  Q
    | |||||||||||||    
T  38997358 atacgcgaacttaca 38997344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 338
Target Start/End: Original strand, 28804835 - 28804940
Alignment:
Q  233 aaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatat 332  Q
    |||||||||||||||||| ||| | || |||||||| ||||||  ||||||||   | |||||||||||||||   |||||| |  |||||||||| |||    
T  28804835 aaaccaaaacgtttataatttaaacggtttgttttaaaacaaaagaagatacatcaatgaaaaccaaaaacacaaaaacttatattgacgatttacttat 28804934  T
Q  333 ttaagc 338  Q
    ||||||    
T  28804935 ttaagc 28804940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 9672353 - 9672409
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| |||||  |||||||||||||||||  |||| ||||||||||    
T  9672353 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttatatatttaagc 9672409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 13163127 - 13163067
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacga 292  Q
    |||||||||||||||||||||||||||  ||| ||||||| ||| ||| ||||| ||||||    
T  13163127 aaaaccaaaacgtttataacttacaggatttgctttagaagaaaaaaaaatacaaggacga 13163067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 35929608 - 35929520
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcttt 341  Q
    |||||||||||| |   |||||| |||  |||||||||||||||||||| | | |||||||||| ||||  ||||| ||||||||||||    
T  35929608 tacaggggttgtctcgcaacaaaaaaacttacagggacgaaaaccaaaatctcacgaacttacaaggaccttttacttatttaagcttt 35929520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 42775489 - 42775421
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||| ||||||    |||||||||||||| ||||||| ||| |||||||||||||||    
T  42775489 aacaaaaaaagatacaaggacgatttgcaaaaacacgcgaaattacaggaacgttttacatatttaagc 42775421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 42776808 - 42776876
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| ||| |||||| ||||    
T  42776808 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacggtttgcatattaaagc 42776876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 318
Target Start/End: Original strand, 28592421 - 28592456
Alignment:
Q  283 acagggacgaaaaccaaaaacacgcgaacttacagg 318  Q
    |||||||||||||| |||||||||||||||||||||    
T  28592421 acagggacgaaaacaaaaaacacgcgaacttacagg 28592456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 8e-62; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 108 - 343
Target Start/End: Complemental strand, 45499536 - 45499301
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||||||| ||||  |||    | ||||||||   ||||||||||     
T  45499536 cctgtaatatagtcagggatcatctgtcacgacacataagcgttttttgccacatcatcctttgccatgtcagtcgccgttagacagtgaggcgttttt- 45499438  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  45499437 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacg 45499338  T
Q  307 cgaacttacagggacgatttacatatttaagctttat 343  Q
    |||||||||||||||  ||||||||||||||| ||||    
T  45499337 cgaacttacagggaccttttacatatttaagccttat 45499301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 108 - 338
Target Start/End: Complemental strand, 40303524 - 40303294
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgttttt-gccatgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||||||| ||||  |||    | ||||||||   ||||||||||     
T  40303524 cctgtaatatagtcagggatcatctgtcacgacacataagcgttttttgccacatcatcctttgccatgtcagtcgccgttagacagtgaggcgttttt- 40303426  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  40303425 gtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacg 40303326  T
Q  307 cgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||  |||||||||||||||    
T  40303325 cgaacttacagggaccttttacatatttaagc 40303294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 1841677 - 1841813
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| |||||||||||  |||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1841677 tttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaa 1841776  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || || ||||||||||||||||||||||||    
T  1841777 acacgccaaatttcagggacgatttacatatttaagc 1841813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 13947884 - 13947751
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  13947884 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagataca-ggacgaaaaccaaaa 13947786  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| || |||||||||||||||||||||||||    
T  13947785 acacgccaaattacagggacgatttacatatttaa 13947751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 14089073 - 14088940
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  14089073 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagataca-ggacgaaaaccaaaa 14088975  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| || |||||||||||||||||||||||||    
T  14088974 acacgccaaattacagggacgatttacatatttaa 14088940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 1840294 - 1840158
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| ||||||||| | || ||||||||||    
T  1840294 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacaagaacaaaaaccaaaa 1840195  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  1840194 acacgccaaattacagggacgatttacatatttaagc 1840158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 40304684 - 40304820
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  40304684 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 40304783  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||  |||||||||||||||    
T  40304784 acacgcgaacttacagggaccttttacatatttaagc 40304820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 22053261 - 22053128
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| |||||| |||  |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  22053261 tttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttac-ggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaa 22053163  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||||||||||  |||  |||||||||||||    
T  22053162 acacgcgaacttacaaagaccttttacatatttaa 22053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 334
Target Start/End: Complemental strand, 16142363 - 16142231
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| |||| |||||| |||||||||| |||||||||||| ||||||||||||| | ||| |||||| ||||||||||||||    
T  16142363 tttttgtaacagatgctgacgggagggccgaaaatcaaaacgtttgtaacttacagggtttgttttagaacagaaaaaaatacagagacgaaaaccaaaa 16142264  T
Q  302 acacgcgaacttacagggacgatttacatattt 334  Q
    ||||||||||||||| |||||||||||||||||    
T  16142263 acacgcgaacttacaaggacgatttacatattt 16142231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 28563513 - 28563377
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||| ||| ||||||||| |||||||||||||||    
T  28563513 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttataggggttgttttagaagaaaaaaagatacaaggacgaaaaccaaaa 28563414  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  28563413 acacgccaaattacagggacgatttacatatttaagc 28563377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 345
Target Start/End: Original strand, 38729984 - 38730128
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacg-aaaaccaaa 300  Q
    |||||||||| || | | |||| ||||||||||| ||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  38729984 tttttgtaacagaggctaacggcagggacgaaaatcaaaaggtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaaccaaa 38730083  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    |||||||||||||||| ||| |||||| |||||||||| ||||||    
T  38730084 aacacgcgaacttacaaggatgatttatatatttaagccttattt 38730128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 45492954 - 45493090
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  45492954 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 45493053  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||||||||  |||||||||||||||    
T  45493054 acacgcgaatttacagggaccttttacatatttaagc 45493090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 45500696 - 45500832
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| ||||||||||| ||||||||||  ||||| |||   ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  45500696 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 45500795  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||||||||  |||||||||||||||    
T  45500796 acacgcgaatttacagggaccttttacatatttaagc 45500832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 218 - 338
Target Start/End: Complemental strand, 38728305 - 38728186
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| ||||||||||| |||||||||| |||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||    
T  38728305 tgacgggagggacgaaaatcaaaacgtttgtaacttgcagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaactcgtgaacttacag 38728206  T
Q  318 ggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||    
T  38728205 ggacga-ttacatatttaagc 38728186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 44465028 - 44465147
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| |||||| |||| ||||| |||||||||||||| ||  |||||||||||||  ||| ||||| |||||| ||||||||||||||||||||||||    
T  44465028 tgacggcagggaccaaaagcaaaatgtttataacttacaaggtctgttttagaacaacaaaaaatacaaggacgagaaccaaaaacacgcgaacttacag 44465127  T
Q  318 ggacgatttacatatttaag 337  Q
    ||||||||||||||||||||    
T  44465128 ggacgatttacatatttaag 44465147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 22060401 - 22060539
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaa 300  Q
    ||||||||||  ||||| |||  ||| || |||||||||||| ||||||||| |||||||||||||| |||||| ||| |||| ||||||||||||||||    
T  22060401 tttttgtaacataagttaacgttaggaactaaaaccaaaacgcttataactttcaggggttgttttaaaacaaaaaaaagatatagggacgaaaaccaaa 22060500  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagct 339  Q
    ||||||| |||||||||||||  ||||||||||||||||    
T  22060501 aacacgcaaacttacagggaccttttacatatttaagct 22060539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 338
Target Start/End: Original strand, 16143502 - 16143654
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatac 284  Q
    ||||||||| |  ||||||||| |||| |||||| |||  |||||| |||||||||| ||| | ||||||||||| ||||||||||||||| ||||||||    
T  16143502 gttagacacatcagcgtttttt-taacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatac 16143600  T
Q  285 agggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||| ||||||||||| | ||||| |||||  |||||||||||||||    
T  16143601 agggacgaaaatcaaaaacacgcaagcttacggggaccttttacatatttaagc 16143654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 7317504 - 7317392
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||||||||| ||| | |||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||   |    
T  7317504 agggaccaaaaccaaaaagttaacaacttatagggtttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgcgaacttacagggatctt 7317405  T
Q  325 ttacatatttaag 337  Q
    |||||||||||||    
T  7317404 ttacatatttaag 7317392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 336
Target Start/End: Complemental strand, 472873 - 472723
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatac 284  Q
    |||||||||||| || ||||| ||||| || | |||| | |||||| |||| |||||||||||||||||||| | |||||||||||| ||| |||||| |    
T  472873 gttagacacgtaagcattttt-gtaacagatgatgactgtagggaccaaaaacaaaacgtttataacttacatgagttgttttagaataaaaaaagattc 472775  T
Q  285 agggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||| | ||||||| |||||| ||||||||||||| |||||||||||||||||    
T  472774 aggaatgaaaaccgaaaacaagcgaacttacaggaacgatttacatatttaa 472723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 35588230 - 35588128
Alignment:
Q  236 ccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatattta 335  Q
    ||||||||||||||||||||  |||||||||||||| ||| ||| ||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  35588230 ccaaaacgtttataacttacgagggttgttttagaataaaaaaatatacatggacgaaaaccaaaagcacgcgaacttacatggacgatttccatattta 35588131  T
Q  336 agc 338  Q
    |||    
T  35588130 agc 35588128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 44097273 - 44097411
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaac--aaataaagatacagggacgaaaaccaa 299  Q
    |||||||||| |||||| |||  |||||| |||||||||| ||| | ||||||||||| |||||||||||   ||| ||| |||||||||||||||||||    
T  44097273 tttttgtaacagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaggaaaaaaaaaatacagggacgaaaaccaa 44097372  T
Q  300 aaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||| |||  |||| ||||||||||    
T  44097373 aaacacgcgaacttacagagaccttttatatatttaagc 44097411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 6844042 - 6844155
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||||||||| | | | |||||||| || ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||  |    
T  6844042 agggactaaaaccaaaaagctaacaacttacaaggtttgttttagaacaaaaaaagatacaaggatgaaaaccaaaaacacgcgaacttacaaggacctt 6844141  T
Q  325 ttacatatttaagc 338  Q
    ||||||||||||||    
T  6844142 ttacatatttaagc 6844155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 15346985 - 15346868
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| | |||| |||| |||||||||||||| ||||| |||||||||||||||||| ||||||| | ||| ||||||||||||||||| ||||||| |    
T  15346985 tgacggcaaggaccaaaagcaaaacgtttataatttacaagggttgttttagaacaaaaaaagatatatggatgaaaaccaaaaacacgcaaacttactg 15346886  T
Q  318 ggacgatttacatattta 335  Q
     ||| |||||||||||||    
T  15346885 agacaatttacatattta 15346868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 44421264 - 44421400
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| || ||| |||| ||||||||||||||||||| ||   |||||||||| ||| || |||||| |||||||||| ||||    
T  44421264 tttttgtaacagatggtgacggcagagaccaaaagcaaaacgtttataacttaccggctctgttttagaagaaaaaaggatacaaggacgaaaacaaaaa 44421363  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||||||||| |||||||||||||||||    
T  44421364 acacgccaatttacagggatgatttacatatttaagc 44421400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 15348383 - 15348496
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| ||||  ||||| ||||||||||||| ||||||||||| |||||| |||||||||| ||| ||||||||||| | |||| | |||| |||||||    
T  15348383 agggaccaaaagtaaaacatttataacttacatgggttgttttacaacaaaaaaagatacagagacaaaaaccaaaaagatgcgagcgtacaaggacgat 15348482  T
Q  325 ttacatatttaagc 338  Q
    ||||||||||||||    
T  15348483 ttacatatttaagc 15348496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 34591838 - 34591726
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||| |||||||||||||||||| |  | ||||||||||||||| ||||||||| |||||||||| ||||| || | |||||||| |||||||    
T  34591838 agggaccaaaagcaaaacgtttataacttaaatagtttgttttagaacaaa-aaagatacaaggacgaaaacaaaaaatacacaaacttacatggacgat 34591740  T
Q  325 ttacatatttaagc 338  Q
    ||||||||||||||    
T  34591739 ttacatatttaagc 34591726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 18224817 - 18224903
Alignment:
Q  252 ttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| |||||||||||||||||| |||  ||||||||| |||||||||||||| | || ||||||||||  |||||||||||||||    
T  18224817 ttacatgggttgttttagaacaaaaaaacttacagggactaaaaccaaaaacacactaaattacagggaccttttacatatttaagc 18224903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 6842822 - 6842718
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacata 331  Q
    ||||||||||  || | ||||||| ||  |||||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| ||  ||||||||    
T  6842822 aaaaccaaaaaattaacaacttaccggatttgttttaaaataaaaaaagatacagggatgaaaaccaaaaacacgcaaacttacaggaaccttttacata 6842723  T
Q  332 tttaa 336  Q
    |||||    
T  6842722 tttaa 6842718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 9660952 - 9660868
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttaca 316  Q
    |||||||||| | | | ||||||||||| || |||||||||||| |||||||||  || ||||||||||||||||||||||||||    
T  9660952 aaaaccaaaaagctaacaacttacagggtttattttagaacaaaaaaagatacaacgatgaaaaccaaaaacacgcgaacttaca 9660868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 40127326 - 40127242
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    ||||||| ||||||||||||||| |||  ||||||||| ||||| ||||   ||||||||||||||||| |||||||||||||||    
T  40127326 tacagggtttgttttagaacaaaaaaacttacagggaccaaaacaaaaattgcgcgaacttacagggaccatttacatatttaag 40127242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 44463658 - 44463569
Alignment:
Q  245 ttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||||||||||  | |||||||||||| |||  |||||  ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  44463658 ttataacttacagggtctattttagaacaaaaaaa--tacagaaacgaaaaccaaaaacacacgaacttacatagacgatttacatatttaa 44463569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 8803252 - 8803359
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggt-tgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacat 330  Q
    |||| |||||| |||| ||||||||| | | | |||||||||||| |||| || ||||||||||||||||| || |||||||||||  |||||||||| |    
T  8803252 aaaagcaaaacatttagaacttacagagttgttttttagaacaaaaaaagttatagggacgaaaaccaaaatcatgcgaacttacaaagacgatttactt 8803351  T
Q  331 atttaagc 338  Q
    ||||||||    
T  8803352 atttaagc 8803359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 28165745 - 28165659
Alignment:
Q  253 tacaggggttgttttag-aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| |||||||||| | |||||| |||||||||||||| |||||||||||| ||| |||||||| ||||  |||||||||||||||    
T  28165745 tacaagggttgttttcgcaacaaaaaaagatacagggactaaaaccaaaaacgcgctaacttacatggaccttttacatatttaagc 28165659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 22054412 - 22054335
Alignment:
Q  261 ttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||| ||| ||   |||||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  22054412 ttgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 22054335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 43516484 - 43516399
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| || |||||||||||| |||  ||||||||||||||| |||||  |||||| ||||||||||  |||||||||||||||    
T  43516484 tacagggtttcttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagc 43516399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 43518050 - 43518135
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||| |||  ||||||||| |||||||||||  | ||||||||||||||  ||||| ||||||||||    
T  43518050 tacagggtttgttttagaacaaaaaaacttacagggaccaaaaccaaaaatgcacgaacttacagggatcatttaaatatttaagc 43518135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 10345120 - 10345212
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    ||||||| ||||||||||||||| |||  ||||||||||||||| |||||  ||| || |||||||||  |||||||||||||| | ||||||    
T  10345120 tacagggtttgttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcaaaattacagggatcatttacatatttaaaccttattt 10345212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 13948523 - 13948654
Alignment:
Q  204 tttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaac 303  Q
    |||||||||||||||||| | |||||||||||  |||| |||  ||||||||| |||||||||| ||||||| ||||||| |   |  | || |||||||    
T  13948523 tttgtaacggaagttgacaggagggacgaaaataaaaaagttattaacttaca-gggttgtttttgaacaaaaaaagatataaaaaaaataatcaaaaac 13948621  T
Q  304 acgcgaacttacagggacgatttacatatttaa 336  Q
    | || || ||||| |||||||||||||||||||    
T  13948622 atgccaaattacaaggacgatttacatatttaa 13948654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 14089730 - 14089861
Alignment:
Q  204 tttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaac 303  Q
    |||||||||||||||||| | |||||||||||  |||| |||  ||||||||| |||||||||| ||||||| ||||||| |   |  | || |||||||    
T  14089730 tttgtaacggaagttgacaggagggacgaaaataaaaaagttattaacttaca-gggttgtttttgaacaaaaaaagatataaaaaaaataatcaaaaac 14089828  T
Q  304 acgcgaacttacagggacgatttacatatttaa 336  Q
    | || || ||||| |||||||||||||||||||    
T  14089829 atgccaaattacaaggacgatttacatatttaa 14089861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 20587108 - 20587040
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| |||||||||||||||    
T  20587108 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagc 20587040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 22060141 - 22060218
Alignment:
Q  261 ttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||| ||| ||   |||||||||||||||||||||  |||||||||||| ||||  |||||||||||||||    
T  22060141 ttgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaagc 22060218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 37393985 - 37393892
Alignment:
Q  244 tttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||||||||||  | |||||||| ||| ||| ||||||  ||||||||| ||||||||| ||||||||| | ||||||||| |||||||    
T  37393985 tttataacttacagggtatattttagaataaaaaaatgatacaatgacgaaaacaaaaaacacgtgaacttacatgaacgatttacctatttaa 37393892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 40128900 - 40128985
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| || |||||||||||| |||  ||||||||||||||| |||||  |||||| ||||||||||  ||||||||| |||||    
T  40128900 tacagggtttcttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatgtaagc 40128985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 44492308 - 44492369
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||||||||||| |||||||| |||   |||||||||||||||    
T  44492308 aaagatagagggacgaaaaccaaaaacacgcaaacttacatggatcgtttacatatttaagc 44492369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 20588449 - 20588517
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| |||||||||| |||||    |||||||||||||| ||||||||||| |||||||||||||||    
T  20588449 aacaaaaaaagatacagagacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagc 20588517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 28167303 - 28167386
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||| |||||||||   |||||| ||||||||| |||| |||||||||||| ||| |||||||||||||  ||||| |||||||    
T  28167303 tacaagggttgtttcgcaacaaaaaaagatacaaggactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaa 28167386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 44095492 - 44095426
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgtttta 268  Q
    ||||||||||||||||| |||  |||||| |||||||||| ||| | ||||||||||| ||||||||    
T  44095492 tttttgtaacggaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgtttta 44095426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 44819852 - 44819770
Alignment:
Q  256 aggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| ||||||||||||||| |||  ||||||||| |||| ||||||  || ||| ||| |||||| ||||||||||||||||    
T  44819852 agggtttgttttagaacaaaaaaatttacagggacaaaaatcaaaaatgcgtgaaattatagggaccatttacatatttaagc 44819770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 44820932 - 44820988
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| |||||  |||||| ||||||||||  |||||||||||||||    
T  44820932 tacagggacgaaaacaaaaaatgcgcgaatttacagggaccttttacatatttaagc 44820988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 169237 - 169276
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaa 271  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  169237 aaaaccaaaacgtttataacttacaagagttgttttagaa 169276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 18161040 - 18161099
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||| ||||| ||||||| ||||||||||| || ||| | |||||||||||||||||||    
T  18161040 aaagacacaggtacgaaaagcaaaaacacgccaaattatatggacgatttacatatttaa 18161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 9109117 - 9109008
Alignment:
Q  227 ggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaac-acgcgaacttacagggacgatt 325  Q
    |||| |||| ||||| ||||||||| ||| |  ||||||||| |||||| ||||||| |  ||||||||| |||||  |||| |||||||| |||| |||    
T  9109117 ggaccaaaaacaaaaagtttataacatac-gacgttgttttaaaacaaaaaaagatataaagacgaaaacaaaaaaatacgctaacttacaaggacaatt 9109019  T
Q  326 tacatatttaa 336  Q
    |||||||||||    
T  9109018 tacatatttaa 9109008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 44419958 - 44419885
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggg 259  Q
    ||||||||| || |||||||| |||||||| | |||||| | |||  |||| |||||||||||||||||||||||    
T  44419958 gttagacacataagcgttttt-gtaacggatgatgacggcaaggatcaaaagcaaaacgtttataacttacaggg 44419885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 10344046 - 10343989
Alignment:
Q  281 atacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||| |||||  | |||||||||| ||||  |||||||||||||||    
T  10344046 atacagggacgaaaacaaaaaatgcacgaacttacatggaccttttacatatttaagc 10343989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 28563957 - 28564013
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||| | |||||||||||| ||||  ||||| |||| ||||    
T  28563957 tacagggacgaaaaccaaaatctcgcgaacttacaaggaccttttacttattaaagc 28564013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 42928985 - 42928937
Alignment:
Q  289 acgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    ||||||||||||||  ||||||||||||| |||  ||||||||||||||    
T  42928985 acgaaaaccaaaaatgcgcgaacttacagagaccttttacatatttaag 42928937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 19994635 - 19994499
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  19994635 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 19994536  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  19994535 acacgccaaattacagggacgatttacatatttaagc 19994499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 19995976 - 19996112
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||||||||| || ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19995976 tttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggaccaaaaccaaaa 19996075  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  19996076 acacgccaaattacagggacgatttacatatttaagc 19996112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 44251742 - 44251606
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  44251742 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaaagatacaaggacgaaaaccaaaa 44251643  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  44251642 acacgccaaattacagggacgatttacatatttaagc 44251606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 55948875 - 55949011
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||| ||||| | ||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55948875 tttttgtaacggaagttgacgggagggaagaaaatccaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 55948974  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||||| |||||||||||||||||||||    
T  55948975 acacgccaaattacaaggacgatttacatatttaagc 55949011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 44253114 - 44253250
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| || |||||||| ||||| |||  ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||    
T  44253114 tttttgtaacggaagttgacgggagagacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatatagggacgaaaaccaaaa 44253213  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||| |||||||||||||||||||||||    
T  44253214 acacgccaaattaaagggacgatttacatatttaagc 44253250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 48713384 - 48713520
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||| | ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48713384 tttttgtaacagagtttgactggagggacgaaaagcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 48713483  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  48713484 acacgccaaattacagggacgatttacatatttaagc 48713520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 22309076 - 22309194
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| | |||| |||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||    
T  22309076 tgacggcacggactaaaaccaaaatgcttataacttacaggggttgttttagaataaaaaaagatacagggactaaaaccaaaaacacgcgaacttacag 22309175  T
Q  318 ggacgatttacatatttaa 336  Q
    |||| ||||||||||||||    
T  22309176 ggaccatttacatatttaa 22309194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 10337239 - 10337106
Alignment:
Q  204 tttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaac 303  Q
    |||||||| ||  ||||||| ||||| ||||| ||||| |||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  10337239 tttgtaacagagtttgacgggagggatgaaaagcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaac 10337140  T
Q  304 acgcgaacttacagggacgatttacatatttaag 337  Q
    |||| || ||||||||||||||||||||||||||    
T  10337139 acgccaaattacagggacgatttacatatttaag 10337106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 18597769 - 18597633
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||||| | ||||||||||||| ||| |||||||||||||||||||||||||    
T  18597769 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacggaggttgttttagaataaaaaaagatacagggacgaaaaccaaaa 18597670  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||  || ||||| |||||||||| ||||||||||    
T  18597669 acacggcaaattacatggacgatttaaatatttaagc 18597633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 32082555 - 32082691
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||| | ||||||||||| ||||| |||  ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  32082555 tttttgtaacagagtttgacaggagggacgaaaagcaaaaagttattaacttacaggggttattttagaacaaaaaaagatacagggacgaaaaccaaaa 32082654  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||||| |||||||||||||||||||||    
T  32082655 acacgccaaattacacggacgatttacatatttaagc 32082691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 42889733 - 42889868
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || |||||||| |||||| |||| ||||| |||||||||||||| ||  |||||||||||||| ||||||||| |||||||||| ||||    
T  42889733 tttttgtaacaga-gttgacggcagggaccaaaagcaaaatgtttataacttacatggtctgttttagaacaaaaaaagatacaaggacgaaaacaaaaa 42889831  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| |||||||||||||||||||||||||||||||    
T  42889832 acacgtgaacttacagggacgatttacatatttaagc 42889868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 42977335 - 42977199
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  42977335 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttaaatgggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 42977236  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||||| |||||||||||||||||||||    
T  42977235 acacgccaaattacaaggacgatttacatatttaagc 42977199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 55947497 - 55947361
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||||||||||||||| ||||||||||| ||||| |||  ||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||    
T  55947497 tttttataacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggctgttttataacaaaaaaagatacagggacgaaaaccaaaa 55947398  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    | |||  || |||||||||||||||||||||||||||    
T  55947397 atacgtcaaattacagggacgatttacatatttaagc 55947361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 24919156 - 24919053
Alignment:
Q  235 accaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatattt 334  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||    
T  24919156 accaaagcgtttataacttacaggggttgttttagaacaaaaaaagatacaggaacgaagaccaaaaacacgcaaacttacaggtacgatttacatattt 24919057  T
Q  335 aagc 338  Q
    ||||    
T  24919056 aagc 24919053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 345
Target Start/End: Original strand, 42978841 - 42978984
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| ||||||||||| |||||  ||  ||||||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  42978841 tttttgtaacagagtttgacgggagggacgaaaagcaaaaaattattaacttacaaggattgttttagaacaaaaaaagatacagggacgaaaaccaaaa 42978940  T
Q  302 acacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    |||||| || ||||| ||||||||||||||||||||| ||||||    
T  42978941 acacgccaaattacaaggacgatttacatatttaagccttattt 42978984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 217 - 338
Target Start/End: Original strand, 54123482 - 54123603
Alignment:
Q  217 ttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttaca 316  Q
    ||||||| ||||||||||| ||||| |||  ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| || || |||||    
T  54123482 ttgacgggagggacgaaaagcaaaaagttattaacttacaggagttgttttagaacaaaaaaatatacagggacgaaaaccaaaaacatgccaaattaca 54123581  T
Q  317 gggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||||    
T  54123582 gggacgatttacatatttaagc 54123603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 220 - 331
Target Start/End: Complemental strand, 9561965 - 9561854
Alignment:
Q  220 acggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacaggg 319  Q
    ||||||||||  || |||||||| |||||||||||||| ||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  9561965 acggaagggatcaataccaaaacatttataacttacagaggttgttttagataaaaaaaagatacagagacgaaaaccaaaaacacgcgaacttacaggg 9561866  T
Q  320 acgatttacata 331  Q
    ||||||||||||    
T  9561865 acgatttacata 9561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 338
Target Start/End: Complemental strand, 22307792 - 22307672
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| |||||| |||||||||| | |||||||||||| |||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||||    
T  22307792 tgacggcagggactaaaaccaaaatgcttataacttacaagggttgttttagaacaaaaaacgatacagggactaaaaccaaaaacatgcgaacttacag 22307693  T
Q  318 ggacgatttacatatttaagc 338  Q
    ||||  ||| |||||||||||    
T  22307692 ggaccttttgcatatttaagc 22307672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 336
Target Start/End: Complemental strand, 33607582 - 33607471
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||||||||| ||||| ||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||  |    
T  33607582 agggactaaaaccaaaatgtttacaacttacagggtttgttttagaaaaaaaaaagatacaaggacgaaaaccaaaaacacgcgaacttacagagacctt 33607483  T
Q  325 ttacatatttaa 336  Q
    ||||||||||||    
T  33607482 ttacatatttaa 33607471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 54535098 - 54534981
Alignment:
Q  219 gacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagg 318  Q
    ||||| |||||| |||| |||||| ||||||| |||| |||  | |||||||||||| ||||| |||||||||||||||||||||||||||||||||| |    
T  54535098 gacggtagggacaaaaagcaaaacatttataatttacggggtctattttagaacaaaaaaagacacagggacgaaaaccaaaaacacgcgaacttacatg 54534999  T
Q  319 gacgatttacatatttaa 336  Q
    ||||||||||||||||||    
T  54534998 gacgatttacatatttaa 54534981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 21354723 - 21354842
Alignment:
Q  227 ggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcg-aacttacagggacgatt 325  Q
    |||| |||||||||| ||| | ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||   ||    
T  21354723 ggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaacacgcgaaacttacagggatcttt 21354822  T
Q  326 tacatatttaagctttattt 345  Q
    ||||||||||||| ||||||    
T  21354823 tacatatttaagccttattt 21354842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 38157157 - 38157023
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||| |||| |||||||| |  || ||| ||||||||||  || | |||||||| || ||||||||||||||| |||  ||||||||||||||||||||    
T  38157157 tttttttaacagaagttgatgttagagaccaaaaccaaaaaattaacaacttacaaggtttgttttagaacaaaaaaaattacagggacgaaaaccaaaa 38157058  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||||||||||||| |||||||||||||||    
T  38157057 acacgcgaacttacagggatgatttacatatttaa 38157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 108 - 337
Target Start/End: Complemental strand, 48712089 - 48711860
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgtttttgc-catgtcatccttcgccacatcaacgactgttagacacgtaggcgtttttt 206  Q
    ||||||||||||| |||||||||||||||   ||||||||||| ||||  || |||| |  | ||||| |||   |||||||| ||   ||||||||||     
T  48712089 cctgtaatatagtcagggatcatctgtcagtccacataagcgtgtttggtcaagtcagcacttgccacgtcactcactgttagccaacaaggcgttttt- 48711991  T
Q  207 gtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacg 306  Q
    ||||| ||  ||||||| | ||||||||| ||||| |||   ||||| |||||||| |||||||||||| ||||||||| |||||||||| |||||||||    
T  48711990 gtaaccgagtttgacgggaaggacgaaaatcaaaatgttatcaacttgcaggggttattttagaacaaaaaaagatacaaggacgaaaacaaaaaacacg 48711891  T
Q  307 cgaacttacagggacgatttacatatttaag 337  Q
    | || ||||| ||||||||||||||||||||    
T  48711890 caaaattacaaggacgatttacatatttaag 48711860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 53355237 - 53355100
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttaga--acaaataaagatacagggacgaaaaccaa 299  Q
    |||||||||||| ||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||  ||||| ||| |||||| ||| ||||| ||    
T  53355237 tttttgtaacggcagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacacaaaaaaaaatacagagacaaaaacaaa 53355138  T
Q  300 aaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||| | || |||||||||| |||||||||||||||    
T  53355137 aaacacaccaaattacagggacaatttacatatttaag 53355100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 10338090 - 10338226
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa--gatacagggacgaaaaccaa 299  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  ||||||||||||||||||||| |||||| |||  ||||||| ||| ||||||||    
T  10338090 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttaaaacaaaaaaaaagatacagagacaaaaaccaa 10338189  T
Q  300 aaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||| || ||||| |||||||||||||||||||    
T  10338190 aaacacgcaaaattacatggacgatttacatatttaa 10338226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 54121964 - 54121826
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaac--caa 299  Q
    |||||||||| ||  || |||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| ||||||||||||||||||||   ||    
T  54121964 tttttgtaacagagtttaacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaa 54121865  T
Q  300 aaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||| | |  || |||||||||||||||||||||||||||    
T  54121864 aaaaatgtcaaattacagggacgatttacatatttaagc 54121826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 54536618 - 54536753
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaa 300  Q
    |||||||||| || | |||| | |||||| |||| |||||||||||||| ||||| ||  |||||||||||||| ||| |||||| |||| ||||||||     
T  54536618 tttttgtaacagatggtgacagcagggaccaaaagcaaaacgtttataatttacatggtctgttttagaacaaaaaaaagatacatggacaaaaaccaag 54536717  T
Q  301 aacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||||| |||||||||||||||||||||||||    
T  54536718 aacacgcgaatttacagggacgatttacatatttaa 54536753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 9563287 - 9563380
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatt 325  Q
    ||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||| ||||| ||||    
T  9563287 aaaaccaaaacatttataactttcaggggttgtttaagaacaaaaaaagatacagggacgaaaacaaaaaatacgcgaacttaaagggatgatt 9563380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 33609294 - 33609402
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaac--aaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttaca 329  Q
    |||||||||| ||| | ||||||||||| |||||||||||   ||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||||    
T  33609294 aaaaccaaaatgttcacaacttacagggtttgttttagaaagaaaaaaaagatacaaggacgaaaaccaaaaacacgcgaacttacagggaccttttaca 33609393  T
Q  330 tatttaagc 338  Q
    |||||||||    
T  33609394 tatttaagc 33609402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 168 - 338
Target Start/End: Original strand, 25351689 - 25351855
Alignment:
Q  168 tcgccacatcaacgactgttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgtttt 267  Q
    ||||||||||| |  ||||| | ||||||| ||||||| ||||| || | |||| | |||||| ||||||||||||||||||||||||| ||||| ||||    
T  25351689 tcgccacatcatcatctgtttgccacgtagccgttttt-gtaactgatgatgacagcagggaccaaaaccaaaacgtttataacttaca-gggttatttt 25351786  T
Q  268 agaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||| ||||||||| |||| |||| |||| |||||| ||||||||  ||||||| ||||||||||||    
T  25351787 agaacaaa-aaagatacaaggacaaaaatcaaacacacgcaaacttaca-agacgattaacatatttaagc 25351855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 3069061 - 3068926
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | | |||| ||||||||||| |||||| ||| ||| |||||||| ||||||||||||||| |||||||||| ||||||||  |||     
T  3069061 tttttgtaacagatgctaacgggagggacgaaaatcaaaacatttgtaatttacagggattgttttagaacaaaaaaagatacagagacgaaaataaaac 3068962  T
Q  302 acacgcgaacttacagggacgatttacatatttaag 337  Q
    |||| | ||| |||||||||  | ||||||||||||    
T  3068961 acacacaaacctacagggacattgtacatatttaag 3068926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 18597855 - 18597912
Alignment:
Q  281 atacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  18597855 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 18597912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 338
Target Start/End: Original strand, 39654614 - 39654730
Alignment:
Q  220 acggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacaggg 319  Q
    |||| ||||||||||||||||| ||| | |||||||| || ||||||||||| ||| |||  ||||| |||||||||||||| ||||| |||||||||||    
T  39654614 acgggagggacgaaaaccaaaaggttaacaacttacatggtttgttttagaaaaaaaaaa--tacagtgacgaaaaccaaaatcacgccaacttacaggg 39654711  T
Q  320 acgatttacatatttaagc 338  Q
    |   |||| ||||||||||    
T  39654712 atcttttaaatatttaagc 39654730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 4906215 - 4906130
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| || |||||||| ||| |||  |||||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  4906215 tacagggtttattttagaaaaaaaaaacttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 4906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 55017831 - 55017743
Alignment:
Q  249 aacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaa-cacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||| || || |||||||||||| |||  |||||  |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  55017831 aacttacaaggtttattttagaacaaaaaaaattacagaaacgaaaacaaaaaaacacgcgaacttacagggacgatttacatatttaa 55017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 4932084 - 4931999
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| || ||||| || ||| |||  |||||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  4932084 tacagggtttattttaaaaaaaaaaaacttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 4931999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 55019330 - 55019415
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||| |||  |||||||| |||||| |||||  |||||| ||||| |||| ||||||||||||||||    
T  55019330 tacagggtttgttttagaacaaaaaaacttacagggaagaaaacaaaaaatgcgcgaaattacaaggaccatttacatatttaagc 55019415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 4907465 - 4907519
Alignment:
Q  284 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  4907465 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 4907519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 4933335 - 4933389
Alignment:
Q  284 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  4933335 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 4933389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 29756327 - 29756273
Alignment:
Q  284 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  29756327 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 29756273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 29757610 - 29757666
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||  || ||||||||||||||  |||||||||||||||    
T  29757610 tacagggacgaaaaccaaaaatgcgtgaacttacagggaccttttacatatttaagc 29757666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 39929344 - 39929412
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||| ||||| |||||||||||||||    
T  39929344 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacatggacgttttacatatttaagc 39929412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 35786682 - 35786737
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||| ||||||||||||||||  |||||||||||||||||  ||||||||||||||    
T  35786682 tacaaggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaag 35786737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 2671628 - 2671542
Alignment:
Q  253 tacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||   |||||| ||| ||||||||||| |||||||||||  |||||||||||||||||  ||| | |||||||||    
T  2671628 tacaggggttgtttcgcaacaaaaaaaagatacagggactaaaaccaaaaatgcgcgaacttacagggacctttttcttatttaagc 2671542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 11148436 - 11148351
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| |||||||||   |||||| ||||||| || ||| |||||||||||| ||| |||||||||||||  ||||| |||||||||    
T  11148436 tacaagggttgtttcgcaacaaaaaaagatatagcgactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaagc 11148351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 34538212 - 34538127
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| |||||||||   |||||| ||||||||| |||| ||||||||||||  || ||||||| |||||  |||||||||||||||    
T  34538212 tacaagggttgtttcgcaacaaaaaaagatacaaggactaaaaccaaaaacgtgctaacttaccgggaccttttacatatttaagc 34538127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 16879295 - 16879174
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgtttta----gaacaaataaagatacagggacgaaaacc 297  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  || |||||| |||| ||||||    ||| ||| | ||||||| | ||||||| |    
T  16879295 tttttgtaacagattttgacgggagggacgaaaagcaaaaggttattaccttacaagggtggttttaaaaagaagaaaaacagatacatgtacgaaaaac 16879196  T
Q  298 aaaaacacgcgaacttacaggg 319  Q
    ||||||||||||| ||||||||    
T  16879195 aaaaacacgcgaatttacaggg 16879174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 22674238 - 22674154
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    ||||||| || |||||||| ||| |||  |||| |||||||||| |||||  |||||||||| ||||||  ||||||||||||||    
T  22674238 tacagggtttattttagaaaaaaaaaacttacaaggacgaaaacaaaaaatgcgcgaacttatagggaccttttacatatttaag 22674154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 23702451 - 23702395
Alignment:
Q  285 agggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcttt 341  Q
    |||||||||||| |||||  |||||||||||| ||||  ||||||||||||||||||    
T  23702451 agggacgaaaacaaaaaatgcgcgaacttacaaggaccttttacatatttaagcttt 23702395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 23703865 - 23703921
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||| ||||||||||||  |||||||||| ||||||  |||||||||||||||    
T  23703865 tacagggatgaaaaccaaaaatgcgcgaacttagagggaccttttacatatttaagc 23703921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 25350600 - 25350524
Alignment:
Q  236 ccaaaacgtttataacttacaggggttgttttagaac-aaataaagatacagggacgaaaaccaaaaacacgcgaac 311  Q
    ||||||| |||||||||| ||||| |||||||||||| ||| ||| ||| | |||||||||| |||||||| |||||    
T  25350600 ccaaaacatttataacttccagggtttgttttagaacaaaaaaaaaatataaggacgaaaacaaaaaacacacgaac 25350524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 39665322 - 39665274
Alignment:
Q  288 gacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||| |||||  ||||||||||||||||| ||||||||||||||    
T  39665322 gacgaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaa 39665274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 39928002 - 39927934
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| ||| |||||| ||||    
T  39928002 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttgcatattaaagc 39927934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 44445084 - 44445164
Alignment:
Q  238 aaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagg 318  Q
    |||| |||||||||||||| || ||||||   |||||  ||||| || ||||||||||| |||||||| ||||||||||||    
T  44445084 aaaaagtttataacttacaaggtttgtttcccaacaataaaagacacggggacgaaaacaaaaaacacacgaacttacagg 44445164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 10337996 - 10338038
Alignment:
Q  108 cctgtaatatagttagggatcatctgtcacgtcacataagcgt 150  Q
    ||||||||||||| |||||||||||||||  ||||||||||||    
T  10337996 cctgtaatatagtcagggatcatctgtcagttcacataagcgt 10338038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 35785222 - 35785164
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctt 340  Q
    ||||||||| ||||| ||||| ||||||||||||| |||   |||||||||||||||||    
T  35785222 tacagggacaaaaacaaaaaatacgcgaacttacatggatcttttacatatttaagctt 35785164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 7499416 - 7499360
Alignment:
Q  279 agatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatattta 335  Q
    ||||||||||||||||| ||||||||||  ||  |||| ||||| ||||||||||||    
T  7499416 agatacagggacgaaaagcaaaaacacgtcaaactacaaggacgctttacatattta 7499360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 7e-50; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 16673178 - 16673314
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  16673178 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 16673277  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  16673278 acacgcaaaattacagggacgatttacatatttaagc 16673314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 7655186 - 7655322
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7655186 tttttgtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 7655285  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||||||| |||||||||||||||||||    
T  7655286 acacgccaaattacaggaacgatttacatatttaagc 7655322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 50316972 - 50317106
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  50316972 tttttgtaacagatgctgacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaa 50317071  T
Q  302 acacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||||||||| |||||||||||||||||||    
T  50317072 acacgcgaacttacatggacgatttacatatttaa 50317106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 28920577 - 28920713
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  28920577 tttttgtaacggaagttgacgggagggacgaaaatcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaacaaaaa 28920676  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||| ||||||||||||||    
T  28920677 acacgccaaattacagggacgacttacatatttaagc 28920713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 28919220 - 28919084
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||||||||||||||| ||||| |||  ||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||    
T  28919220 tttttgtaacggaagttgacggaagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggatgaaaatcaaaa 28919121  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||| ||||| ||||||||||    
T  28919120 acacgccaaattacagggacaatttatatatttaagc 28919084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 33258017 - 33257882
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  33258017 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggg-ttgttttagaacaaaaaaagatacaaggacaaaaaccaaaa 33257919  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  33257918 acacgccaaattacagggacgatttacatatttaagc 33257882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 33259294 - 33259430
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| |||||||||||  |||| |||  ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  33259294 tttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaaaacaaaaaaagatacagggacgaaaaccaaaa 33259393  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||| ||||||||||||||||    
T  33259394 acacgccaaattacagggacaatttacatatttaagc 33259430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 33278189 - 33278054
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  |||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  33278189 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggg-ttgttttagaacaaaaaaagatacaaggacaaaaaccaaaa 33278091  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  33278090 acacgccaaattacagggacgatttacatatttaagc 33278054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 33279453 - 33279589
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| |||||||||||  |||| |||  ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  33279453 tttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaaaacaaaaaaagatacagggacgaaaaccaaaa 33279552  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||| ||||||||||||||||    
T  33279553 acacgccaaattacagggacaatttacatatttaagc 33279589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 36145481 - 36145345
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  36145481 tttttgtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacagggacgaaaacaaaaa 36145382  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    | |||| || |||||||||||||||||||||||||||    
T  36145381 atacgccaaattacagggacgatttacatatttaagc 36145345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 24438869 - 24439002
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaa 300  Q
    |||||||||| || | ||||||  |||||||||| |||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  24438869 tttttgtaacagatgctgacgggtgggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaaagatacagggacgaaaaccaaa 24438968  T
Q  301 aacacgcgaacttacagggacgatttacatattt 334  Q
    |||||||||| |||||||||||||||||||||||    
T  24438969 aacacgcgaatttacagggacgatttacatattt 24439002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 7653823 - 7653687
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||| |||||||||||| |||||| |||| ||||| |||  ||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||    
T  7653823 tttttgtaatggaagttgacgggagggacaaaaatcaaaaagttattaacttataggggctgttttagaacaaaaaaagatacagggacgaaaacaaaaa 7653724  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    | |||| || |||||||||||||||||||||||||||    
T  7653723 atacgccaaattacagggacgatttacatatttaagc 7653687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 13211001 - 13211168
Alignment:
Q  168 tcgccacatcaacgactgttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgtttt 267  Q
    ||||||||||| |  | ||||||||| || ||||||| ||||||||| | |||||| |||||  |||| |||||| ||||||||||||||||  ||||||    
T  13211001 tcgccacatcagctgccgttagacacataagcgtttt-tgtaacggatgatgacggcagggaataaaagcaaaacatttataacttacagggtctgtttt 13211099  T
Q  268 agaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||| | ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  13211100 agaacaaaaagagatacagggacgaaaaccaaaaacacacaaacttacagggaagatttacatatttaa 13211168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 36146834 - 36146962
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||||| || ||||||||||||||| ||||||||| |||||||||||||||    
T  36146834 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacatggattgttttagaacaaaaaaagataca-ggacgaaaaccaaaa 36146932  T
Q  302 acacgcgaacttacagggacgatttacata 331  Q
    |||||  || ||||||||||||||||||||    
T  36146933 acacgtcaaattacagggacgatttacata 36146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 7185778 - 7185914
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | ||||||||||||| |||| ||||| |||||||||||||||||  |||||||||| ||| |||||||||||||||||||| ||||    
T  7185778 tttttgtaacagatgctgacggaagggaccaaaagcaaaatgtttataacttacagggtctgttttagaataaaaaaagatacagggacgaaaacaaaaa 7185877  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||| || |||||||| ||||||||| |||||||||||    
T  7185878 acatgcaaacttacaaggacgatttgcatatttaagc 7185914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 185 - 338
Target Start/End: Original strand, 22684056 - 22684208
Alignment:
Q  185 gttagacacgtaggcgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatac 284  Q
    ||||||||| | |||||||||| |||| ||||||||||| ||||||||||  ||||| |||   || |||||||| ||||||||||||||| ||||||||    
T  22684056 gttagacactttggcgtttttt-taacagaagttgacggtagggacgaaattcaaaaagttatcaatttacagggtttgttttagaacaaaaaaagatac 22684154  T
Q  285 agggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    | |||||||||||||||||||||||||||||| ||||  |||||||||| ||||    
T  22684155 atggacgaaaaccaaaaacacgcgaacttacaaggaccttttacatattaaagc 22684208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 41668410 - 41668274
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| || |||||||| ||||| |||  |||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||    
T  41668410 tttttgtaacagagtttgacgggagagacgaaaagcaaaaagttattaacttacagaggttgttttagaacaaaaaaatatacagagacgaaaaccaaaa 41668311  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||| ||||||||||||||||||||    
T  41668310 acacgccaaattacagagacgatttacatatttaagc 41668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 50315455 - 50315319
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||||||| |||  |||||| |||||||||| ||| | |||||||||||   ||||||||||||| |||  ||||| ||||||||||||||    
T  50315455 tttttgtaacggaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacagagacgaaaaccaaaa 50315356  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||  |||||||||||||||    
T  50315355 acacgcgaacttacagggaccttttacatatttaagc 50315319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 24437214 - 24437075
Alignment:
Q  199 cgttttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaacca 298  Q
    |||||||| ||||  ||||| |||  |||||| |||||||||| ||| | || |||||||| ||||||||||||||| |||||||||| ||||||||| |    
T  24437214 cgttttttttaacaaaagttaacgttagggactaaaaccaaaaagttaacaatttacagggtttgttttagaacaaaaaaagatacagtgacgaaaacaa 24437115  T
Q  299 aaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  24437114 aaaacacgcgaacttacagggaccttttacatatttaagc 24437075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 19057789 - 19057915
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| |||||||||||||||||||||||  |||| |||  ||||||| |||||||||||||||||||| ||||||||| | |||||||| ||||    
T  19057789 tttttgtaacagaagttgacggaagggacgaaaataaaaaagttattaacttataggggttgttttagaacaaaaaaagatacatgaacgaaaactaaaa 19057888  T
Q  302 acacgcgaacttacagggacgatttac 328  Q
    |||||| || |||||| ||||||||||    
T  19057889 acacgccaaattacagagacgatttac 19057915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 216 - 338
Target Start/End: Complemental strand, 33981627 - 33981505
Alignment:
Q  216 gttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttac 315  Q
    |||||||| | ||||||||| |||||||||| ||||||||| |  ||||||||||||||| |||||||||| ||  |||||||||||||| ||||||||     
T  33981627 gttgacgggatggacgaaaatcaaaacgtttgtaacttacatgatttgttttagaacaaaaaaagatacagagaataaaaccaaaaacacacgaacttat 33981528  T
Q  316 agggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||||    
T  33981527 agggacgatttacatatttaagc 33981505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 338
Target Start/End: Complemental strand, 19249455 - 19249321
Alignment:
Q  203 ttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaa 302  Q
    ||||||||| ||  || |||||||||||||||| ||||| |||  |||||||| ||||||||||||||||||| |||||||||  |||||||||||||||    
T  19249455 ttttgtaacagagttttacggaagggacgaaaagcaaaa-gttattaacttaccggggttgttttagaacaaaaaaagatacaaagacgaaaaccaaaaa 19249357  T
Q  303 cacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||  | || |||||||||||||||||||||||||||    
T  19249356 caatccaaattacagggacgatttacatatttaagc 19249321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 18309192 - 18309086
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacata 331  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||| |||  ||| ||| |||||||||||||| |    
T  18309192 aaaaccaaaacgtttataacttacaaggattgttttagaacaaaaaaagatacagggacgaaaatcaaaatcacaagaatttagagggacgatttacaaa 18309093  T
Q  332 tttaagc 338  Q
    |||||||    
T  18309092 tttaagc 18309086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 243 - 336
Target Start/End: Complemental strand, 44268984 - 44268891
Alignment:
Q  243 gtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||||||||| ||  |||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||    
T  44268984 gtttataacttacatggtctgttttagaacaaaaaaagatacagagataaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 337
Target Start/End: Original strand, 19251084 - 19251219
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||| | ||||||||||| |||||  ||  ||| |||||||||||||||||||||||| ||||||| |||||| || || ||||    
T  19251084 tttttgtaacagagtttgactggagggacgaaaagcaaaaaattattaatttacaggggttgttttagaacaaaaaaagatatagggacaaacacaaaaa 19251183  T
Q  302 acacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||| ||  |||||||||||||||||||||||||    
T  19251184 acacgcaaaaatacagggacgatttacatatttaag 19251219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 13209712 - 13209582
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaa 300  Q
    |||||||||| || | |||||| |||||| |||| ||||||||||||| |||||||||  | |||||||||||| ||| |||||| |||||||||  |||    
T  13209712 tttttgtaacagatggtgacggcagggaccaaaagcaaaacgtttatatcttacagggtctattttagaacaaaaaaaagatacaaggacgaaaataaaa 13209613  T
Q  301 aacacgcgaacttacagggacgatttacata 331  Q
    |||||||||| ||| ||||||||||||||||    
T  13209612 aacacgcgaatttatagggacgatttacata 13209582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 7184417 - 7184324
Alignment:
Q  245 ttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||  || ||||||||||| |||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  7184417 ttataatttacagggtctgctttagaacaaaaaaagatacagagacgaaaaccaaaaacacgcgaacttacaagaacaatttacatatttaagc 7184324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 46604552 - 46604440
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||||||||| ||| | ||||||||||| |||| |||||| ||| ||| ||||| ||||||||||||||||||||| |||||||||||||  |    
T  46604552 agggactaaaaccaaaatgttcacaacttacagggtttgtgttagaaaaaaaaaa-atacaaggacgaaaaccaaaaacacgcaaacttacagggacctt 46604454  T
Q  325 ttacatatttaagc 338  Q
    ||||||||||||||    
T  46604453 ttacatatttaagc 46604440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 31321121 - 31321010
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||| ||||| |||| ||  |||||||| ||||||   ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  31321121 agggaccaaaagcaaaatgtttgtattttacagggtttgtttcgcaacaaa--aagatacagggacgaaaaccaaaaacacgcgaacttacagggatgat 31321024  T
Q  325 ttacatatttaagc 338  Q
    |||  |||||||||    
T  31321023 ttaactatttaagc 31321010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 16592083 - 16592022
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  16592083 aaagatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagc 16592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 7001298 - 7001201
Alignment:
Q  238 aaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||||||||||||||  | ||||||||||||||| ||||||||| | | |||||| ||||||||  ||||||||| ||||||||||| |||||||    
T  7001298 aaaacgtttataacttacaatgtttgttttagaacaaa-aaagatacatgaatgaaaacaaaaaacacatgaacttacaaggacgatttacctatttaa 7001201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 16672792 - 16672719
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaa 275  Q
    |||||||||||||||||||||| ||||||| ||| ||||| |||  ||||||| ||||||||||||||||||||    
T  16672792 tttttgtaacggaagttgacgggagggacggaaatcaaaaagttattaacttataggggttgttttagaacaaa 16672719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 9626525 - 9626466
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcttt 341  Q
    ||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||    
T  9626525 tacagggacgaaaacaaaaaatacgcgaacttacagggaccttttacatatttaagcttt 9626466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 28252017 - 28251932
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| |||||||||||||||||| |||  |||||||||||||||||||||  ||| || ||||||||||  ||| |||||||||||    
T  28252017 tacaagggttgttttagaacaaaaaaacttacagggacgaaaaccaaaaatgcgctaaattacagggaccttttgcatatttaagc 28251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 44269071 - 44269132
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  44269071 aaagatatagggatgaaaatcaaaaacacgcgaatttacagagacgatttacatatttaagc 44269132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 52793790 - 52793705
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||| |||  ||||||||||||||| |||||   ||||||||||||||||  || ||||||||||||    
T  52793790 tacagggtttgttttagaacaaagaaacttacagggacgaaaacaaaaaatgagcgaacttacagggacctttaacatatttaagc 52793705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 8323441 - 8323497
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  8323441 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 8323497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 31815772 - 31815828
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  31815772 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 31815828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 46652771 - 46652839
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| |||||||||||||||    
T  46652771 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaagc 46652839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 3893035 - 3892960
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgc 307  Q
    |||| |||||||||||||||||||| | ||| |||||||||||| ||||||| || ||| |||| |||||||||||    
T  3893035 aaaaacaaaacgtttataacttacatgagttattttagaacaaaaaaagatatagagacaaaaatcaaaaacacgc 3892960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 10708077 - 10708026
Alignment:
Q  292 aaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttat 343  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  10708077 aaaaccaaaaacacgcgaacttacagggactttttacatatttaagccttat 10708026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 340
Target Start/End: Original strand, 35973196 - 35973341
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaaca-------aataaagatacagggacgaaa 294  Q
    |||||||||| || | |||||| |  ||| |||||||||||||||||||||||| || ||| |||||||| |       || ||| ||||||| || |||    
T  35973196 tttttgtaacagatggtgacggcaatgaccaaaaccaaaacgtttataacttacgggagttattttagaagagaaaaacaaaaaaaatacaggaacaaaa 35973295  T
Q  295 accaaaaacacgcgaacttacagggacgatttacatatttaagctt 340  Q
    || |||||||||| |||||| ||  |||||||||||||||||||||    
T  35973296 acaaaaaacacgcaaacttatagaaacgatttacatatttaagctt 35973341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 40767684 - 40767618
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||| |||||||||||||| |||||||||||| ||| ||||||||| |||  |||||||||||||    
T  40767684 aacaaaaaaagatacagggactaaaaccaaaaacgcgcaaacttacagagaccttttacatatttaa 40767618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 9627554 - 9627639
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| || |||||||||||| |||  |||||| |||||||| |||||  ||||||||||||| |||  |||||||||||||||    
T  9627554 tacagggtttattttagaacaaaaaaacttacaggaacgaaaacaaaaaatgcgcgaacttacagagaccttttacatatttaagc 9627639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 332
Target Start/End: Original strand, 3894084 - 3894211
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||| | |||||| |||| ||||| |||||| ||||||| ||||| ||||||||  || ||| |   ||||||||||||||| |    
T  3894084 tttttgtaacagatgatgacagcagggaccaaaagcaaaatgtttattacttacaagggttattttagaaagaaaaaaaa---agggacgaaaaccaaca 3894180  T
Q  302 acacgcgaacttacagggacgatttacatat 332  Q
    |||| |||||||  | |||||||||||||||    
T  3894181 acacacgaacttgaatggacgatttacatat 3894211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 8322578 - 8322522
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| |||||  |||||||||||||||||  |||||||||||||||    
T  8322578 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagc 8322522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 31810046 - 31809990
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| |||||  |||||||||||||||||  |||||||||||||||    
T  31810046 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagc 31809990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 26734481 - 26734427
Alignment:
Q  284 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||  |||||||||||| ||||  |||||||||||||||    
T  26734481 cagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaagc 26734427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 12095935 - 12095878
Alignment:
Q  281 atacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||| |||||||||||| | |||||||||||||||  ||||| |||||||||    
T  12095935 atacagggactaaaaccaaaaacgcacgaacttacagggaccttttacttatttaagc 12095878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 13229252 - 13229332
Alignment:
Q  259 ggttgttttagaacaaataaagatacagggacgaaaacc-aaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||  |||||| |||||||||||||  |||||| |||||| ||| |||||||||||||  ||| |||||||||||    
T  13229252 ggttgttttgcaacaaaaaaagatacagggattaaaaccaaaaaacgcgctaacttacagggaccttttgcatatttaagc 13229332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 32847871 - 32847815
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| |||||||||||| ||| |||||||||||||  ||||| |||||||||    
T  32847871 tacagggactaaaaccaaaaacgcgccaacttacagggaccttttacttatttaagc 32847815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 1969684 - 1969645
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaa 241  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  1969684 tttttgtaacggaagttgacgggagggacgaaaatcaaaa 1969645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 31027287 - 31027224
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctt 340  Q
    |||||||||| || ||||| ||||||||  |||||||||| ||||  |||||||||||||||||    
T  31027287 aaagatacagagaagaaaagcaaaaacatacgaacttacatggaccttttacatatttaagctt 31027224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 42300531 - 42300457
Alignment:
Q  261 ttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    |||||||||||||||  ||  |||||| |||||||| ||||| ||||||| |||||||||| | ||||||||||||    
T  42300531 ttgttttagaacaaaataacttacaggaacgaaaac-aaaaatacgcgaaattacagggactacttacatatttaa 42300457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 43882140 - 43882078
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttaca 316  Q
    ||||||||||||||   |||||| |||||||||||||| |||||||||||  ||||||||||||    
T  43882140 tacaggggttgtttcgcaacaaa-aaagatacagggactaaaaccaaaaaagcgcgaacttaca 43882078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 46651430 - 46651367
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatt 333  Q
    |||||| ||||||||||||||||    |||||||||||||| ||||||||||| ||| ||||||    
T  46651430 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttgcatatt 46651367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 14095812 - 14095721
Alignment:
Q  249 aacttacaggggttgttttagaacaaataaagata----cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||| | ||||||||||| ||| |||||||    || |||||||||  ||||||||||||||||||| | ||  |||||||||||||    
T  14095812 aacttacagagtttgttttagaagaaaaaaagatatatacatggacgaaaataaaaaacacgcgaacttacatgaaccttttacatatttaa 14095721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 33485329 - 33485379
Alignment:
Q  287 ggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    ||||||||| ||||||||| | || ||||||| ||||||||||||||||||    
T  33485329 ggacgaaaaacaaaaacacactaaattacaggaacgatttacatatttaag 33485379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 35381436 - 35381378
Alignment:
Q  287 ggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    |||| |||||||||||| ||| |||||||||| ||  ||||| ||||||||||||||||    
T  35381436 ggactaaaaccaaaaacgcgccaacttacaggtaccttttacttatttaagctttattt 35381378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 41925353 - 41925311
Alignment:
Q  105 ggtcctgtaatatagttagggatcatctgtcacgtcacataag 147  Q
    |||||| |||||||||||||||||||||||||  |||||||||    
T  41925353 ggtcctataatatagttagggatcatctgtcagttcacataag 41925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 12097941 - 12097998
Alignment:
Q  281 atacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||| |||||||||||  ||||||||||| |||||  ||||| |||||||||    
T  12097941 atacagggactaaaaccaaaaatgcgcgaacttacggggaccttttacttatttaagc 12097998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 13222976 - 13222915
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| |||| ||||||||||||  || |||||||||||||  ||||| |||||||||    
T  13222976 aaagatacacggactaaaaccaaaaacgtgctaacttacagggaccttttacttatttaagc 13222915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 33753721 - 33753636
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||| |   |||||| |||  |||| ||||||||||||||| | |||||||||||||||||  ||||| ||| |||||    
T  33753721 tacaggggttgtctcgcaacaaaaaaacttacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacctatgtaagc 33753636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 10612128 - 10612188
Alignment:
Q  278 aagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| | |||||||| ||||||||| |||||||| | ||||  |||||||||||||||    
T  10612128 aagatactgagacgaaaagcaaaaacacacgaacttataaggaccttttacatatttaagc 10612188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 11431331 - 11431387
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||| |||||| ||| |||||||||||||  ||||| |||||||||    
T  11431331 tacagggactaaaacgaaaaacgcgccaacttacagggaccttttacttatttaagc 11431387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 42301622 - 42301678
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| |||||||||| ||||| ||||||||||| ||| ||  |||||||||||||||    
T  42301622 tacaaggacgaaaacaaaaaatacgcgaacttagaggaaccttttacatatttaagc 42301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 110 - 338
Target Start/End: Original strand, 1650039 - 1650268
Alignment:
Q  110 tgtaatatagttagggatcatctgtcacgtcacataagcgt-ttttgccatgtcatccttcgccacatcaacgactgttagacacgtaggcgttttttgt 208  Q
    |||||||||||||| |||||||||||||| |||||||  || ||||||||  |||| ||||||| ||||| || | |||||||||||||| |||||| ||    
T  1650039 tgtaatatagttagagatcatctgtcacgacacataaatgtattttgccacatcattcttcgccgcatcagcggccgttagacacgtaggtgttttt-gt 1650137  T
Q  209 aacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa-gatacagggacgaaaaccaaaaacacgc 307  Q
    ||| |||||||||   |||||||||||||||||| ||||||||  ||| |||||||||||||| ||| ||| |||||| | |||||||| ||||||||||    
T  1650138 aacagaagttgacatgagggacgaaaaccaaaacatttataacaaacaagggttgttttagaataaaaaaaagatacatgaacgaaaactaaaaacacgc 1650237  T
Q  308 gaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| ||||| |||||||||||||||    
T  1650238 gaacttacaaggacggtttacatatttaagc 1650268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 338
Target Start/End: Original strand, 3157975 - 3158095
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| ||||||  ||| ||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3157975 tgacggcagggaccgaaagcaaaatgtttataacttacagggtctgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttacag 3158074  T
Q  318 ggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||    
T  3158075 ggacgatttacatatttaagc 3158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 25264477 - 25264341
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||| |||||||| |||||||| |||||| ||||||||| |||||||||||||||    
T  25264477 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaatttacagggattgttttaaaacaaaaaaagatacaaggacgaaaaccaaaa 25264378  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  25264377 acacgccaaattacagggacgatttacatatttaagc 25264341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 338
Target Start/End: Original strand, 39886014 - 39886134
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| |||||| |||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||    
T  39886014 tgacggcagggactaaaaccaaaatgcttataacttacaggggttgttttagaataaaaaaagatacagggactaaaaccaaaaacacgcgaacttacag 39886113  T
Q  318 ggacgatttacatatttaagc 338  Q
    |||| ||||||||||||||||    
T  39886114 ggaccatttacatatttaagc 39886134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 25265827 - 25265963
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||| |||||||| |||||| |||||||||||||||||||| ||||    
T  25265827 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagggattgttttaaaacaaaaaaagatacagggacgaaaacaaaaa 25265926  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||| ||||||||||||||||||||    
T  25265927 acacgccaaattacagagacgatttacatatttaagc 25265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 39884730 - 39884617
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||||||||| | |||||||||||| ||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||    
T  39884730 agggactaaaaccaaaatgcttataacttacaagggttattttagaacaaaaaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccat 39884631  T
Q  325 ttacatatttaagc 338  Q
    ||||||||||||||    
T  39884630 ttacatatttaagc 39884617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 33295368 - 33295503
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||||||||||||||| ||||||| ||| ||||| |||  ||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||    
T  33295368 tttttgtaacggaagttgacgggagggacggaaatcaaaaagttattaacttacaagggttgttttagaacaaa-aaagatacagggacaaaaacaaaaa 33295466  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||| ||||||||||||||||||||    
T  33295467 acacgccaaattacagagacgatttacatatttaagc 33295503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 22714006 - 22714107
Alignment:
Q  237 caaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||||| ||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22714006 caaaacgtttagaacttaccggggttgttttaggacaaaaaaaaatacagggacgaaaaccaaaaacacacgaacttacaggggcgatttacatatttaa 22714105  T
Q  337 gc 338  Q
    ||    
T  22714106 gc 22714107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 341
Target Start/End: Complemental strand, 2552543 - 2552405
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||  | |||||||| | ||||||||| |||||| ||| |||||||| ||| ||||||||||||||| |||||| ||||||||| || |||||    
T  2552543 tttttgtaacaaatgttgacgggaaggacgaaaatcaaaacatttgtaacttacggggtttgttttagaacaaa-aaagatgcagggacgataatcaaaa 2552445  T
Q  302 acacgcgaacttacagggacgatttacatatttaagcttt 341  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  2552444 acacgcaaacttacagagacgatttacatatttaagcttt 2552405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 5462071 - 5461936
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| |||||| |||| ||||| |||||||| ||||||||  |||||||||||||| |||||||||  ||||||||| ||||    
T  5462071 tttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataaattacagggtctgttttagaacaaaaaaagatacaaagacgaaaacaaaaa 5461972  T
Q  302 acacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||||||||||| | |||||||||||||||||||    
T  5461971 acacgcgaacttacggtgacgatttacatatttaag 5461936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 33294077 - 33293940
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaac-aaataaagatacagggacgaaaaccaaa 300  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||| ||| ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  33294077 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaatttataggggttgttttagaacaaaaaaaagatacaaggacgaaaaccaaa 33293978  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||| ||  || ||||| |||||||||| ||||||||||    
T  33293977 aacgcgtcaaattacaaggacgatttatatatttaagc 33293940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 15279555 - 15279692
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| |||||| |||| || || | |||||| || |||||  ||||||| |||||| |||||||||  ||||||||||||||    
T  15279555 tttttgtaacagatgatgacggtagggaccaaaagcataaggcttataatttgcagggtctgttttaaaacaaaaaaagatacaatgacgaaaaccaaaa 15279654  T
Q  302 acacgcgaacttacagggacgatttacatatttaagct 339  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15279655 acacgcgaacttacaaggacgatttacatatttaagct 15279692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 15459924 - 15460061
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| || | |||||| |||||| |||| || || | |||||| || |||||  ||||||| |||||| |||||||||  ||||||||||||||    
T  15459924 tttttgtaacagatgatgacggtagggaccaaaagcataaggcttataatttgcagggtctgttttaaaacaaaaaaagatacaatgacgaaaaccaaaa 15460023  T
Q  302 acacgcgaacttacagggacgatttacatatttaagct 339  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15460024 acacgcgaacttacaaggacgatttacatatttaagct 15460061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 26719497 - 26719386
Alignment:
Q  227 ggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgattt 326  Q
    |||| ||||||||||| ||||||||||||||| ||||||||  || ||| ||||||||| |||||||||| ||||||||||||||||||| ||| |||||    
T  26719497 ggaccaaaaccaaaacatttataacttacaggagttgttttgcaagaaaaaaagatacaaggacgaaaacaaaaaacacgcgaacttacatggatgattt 26719398  T
Q  327 acatatttaagc 338  Q
    |||||| |||||    
T  26719397 acatatataagc 26719386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 26720201 - 26720306
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacata 331  Q
    ||||||||||| |||||||||||||||||||||||   |||||| ||| || |||||||||||||||||||||||||||||||  ||||  |||||||||    
T  26720201 aaaaccaaaacatttataacttacaggggttgtttcgcaacaaa-aaatatgcagggacgaaaaccaaaaacacgcgaacttatggggattatttacata 26720299  T
Q  332 tttaagc 338  Q
    |||||||    
T  26720300 tttaagc 26720306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 328
Target Start/End: Original strand, 2552699 - 2552800
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    ||||||||||| |||||||||  ||||| |||||| ||||||||||||||| ||| ||||| | | |||||| |||||||||||||||||||||||||||    
T  2552699 agggacgaaaatcaaaacgttg-taactaacagggtttgttttagaacaaa-aaatatacaagaatgaaaacaaaaaacacgcgaacttacagggacgat 2552796  T
Q  325 ttac 328  Q
    ||||    
T  2552797 ttac 2552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 45448442 - 45448550
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaa--gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttaca 329  Q
    |||||||||| ||| | |||||| |||| ||||||||||| ||| |||  |||| | |||||||||||||||||||||||||||| ||||||  ||||||    
T  45448442 aaaaccaaaatgttcacaacttatagggtttgttttagaagaaaaaaaaagatataaggacgaaaaccaaaaacacgcgaacttagagggaccttttaca 45448541  T
Q  330 tatttaagc 338  Q
    |||||||||    
T  45448542 tatttaagc 45448550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 17707426 - 17707506
Alignment:
Q  258 gggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||| |||  ||||||||| |||||||||||||||| || ||||| |||| ||||||||||||||||    
T  17707426 gggttgttttagaacaaaaaaacttacagggactaaaaccaaaaacacgctaaattacatggaccatttacatatttaagc 17707506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 17706252 - 17706166
Alignment:
Q  252 ttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| |||||||||||||||||| |||  |||| |||| |||||||||||||||| || ||||||||||  |||||||||||||||    
T  17706252 ttacaagggttgttttagaacaaaaaaacttacaaggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagc 17706166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 358034 - 357978
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  358034 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 27339171 - 27339251
Alignment:
Q  265 tttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    ||||||||||| |||| |||||| |||||||| ||||||| |||||||||||||||   |||| |||||||||||| ||||    
T  27339171 tttagaacaaaaaaagttacaggaacgaaaacaaaaaacatgcgaacttacagggatcttttatatatttaagcttaattt 27339251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 36899986 - 36899899
Alignment:
Q  252 ttacaggggttgttttagaacaaataaagat-acagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| |||||||||||||| ||| |||  | |||||||| |||||||||||||||| || ||||||||||  |||||||||||||||    
T  36899986 ttacaagggttgttttagaagaaaaaaaacttacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagc 36899899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 36901149 - 36901235
Alignment:
Q  252 ttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| |||||||||||||| ||| |||  ||||| ||| |||| ||||||||||| || ||||||||||  |||||||||||||||    
T  36901149 ttacaagggttgttttagaaaaaaaaaacttacagagactaaaaacaaaaacacgctaaattacagggaccttttacatatttaagc 36901235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 21142566 - 21142477
Alignment:
Q  253 tacaggggttgttttagaacaaataaagat-acagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcttt 341  Q
    ||||||| || |||||||| ||| ||| || ||| |||||||||| |||||  |||||||||||||||||  ||||||||||||||||||    
T  21142566 tacagggtttattttagaagaaaaaaaaattacaaggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagcttt 21142477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 2687244 - 2687106
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaa--taaagatacagggacgaaaaccaa 299  Q
    ||||||||||||| |  ||||||| |||| |||| |||||||||| ||||||||  || |||||||| || |||   ||| ||||| || | ||||| ||    
T  2687244 tttttgtaacggatgaagacggaaaggacaaaaagcaaaacgtttttaacttacctggtttgttttaaaataaaacaaaaaatacatgggcaaaaactaa 2687145  T
Q  300 aaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||| | ||||||||| ||||||||||  |||||||||    
T  2687144 aaacatgtgaacttacatggacgatttaactatttaagc 2687106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 337
Target Start/End: Complemental strand, 31819150 - 31819051
Alignment:
Q  238 aaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaag 337  Q
    |||||||||  |||||||| || || ||||  |||||| ||| |||||| |||||||||||||||||| | || ||| ||||||||||||  ||||||||    
T  31819150 aaaacgttttgaacttacatggtttattttgcaacaaaaaaatatacagtgacgaaaaccaaaaacacacaaaattatagggacgatttatttatttaag 31819051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 359318 - 359372
Alignment:
Q  284 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||| |||||  |||||||||||||||||  |||||||||||||||    
T  359318 cagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagc 359372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 7274624 - 7274714
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttat 343  Q
    ||||||||||||||   |||||| ||||||||||| || ||||| |||||  |||||||||||||||||  ||| | ||||||||| ||||    
T  7274624 tacaggggttgtttcgcaacaaaaaaagatacaggaactaaaacaaaaaatgcgcgaacttacagggacctttttcttatttaagccttat 7274714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 27411213 - 27411298
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||| |||||||||||||||||| |||  ||||||||  ||||||| |||  ||| || ||||||||||  |||||||||||||||    
T  27411213 tacaagggttgttttagaacaaaaaaacttacagggataaaaaccataaatgcgctaaattacagggaccttttacatatttaagc 27411298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 27166902 - 27166778
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| |||| | |||| ||| ||||||| ||||||| |   ||||||||||| | |||||  || ||| |||||||||| | |||||| |||||    
T  27166902 tttttgtaacagaagctaacgggaggaacgaaaatcaaaacgatagcaacttacagggatggttttgaaagaaaaaaagatacagtggcgaaaagcaaaa 27166803  T
Q  302 acacgcgaacttacagggacgattt 326  Q
    |||| | || ||||| |||||||||    
T  27166802 acacaccaaattacaaggacgattt 27166778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 27824484 - 27824535
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatac 284  Q
    |||| |||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  27824484 aaaatcaaaacgtttataacttatagggtttgttttagaacaaa-aaagatac 27824535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 340
Target Start/End: Complemental strand, 37963360 - 37963273
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctt 340  Q
    |||| ||||||||||| |||||| |||  || || ||||||||| |||||| ||| || ||||| ||||  |||||||||||||||||    
T  37963360 tacaagggttgttttataacaaaaaaacttatagagacgaaaacaaaaaacgcgctaagttacaaggaccttttacatatttaagctt 37963273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 61081 - 61158
Alignment:
Q  261 ttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| ||||||||| |  |||| ||||||||||| |||| ||||| ||  ||||| | |||||||||    
T  61081 ttgttttagaacaaaaaaagatacaagagcgaagaccaaaaacacacgaatttacaaggttgatttgcttatttaagc 61158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 27409848 - 27409799
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaa 302  Q
    |||| |||||||||||||||||| |||  | |||||||||||||||||||    
T  27409848 tacaagggttgttttagaacaaaaaaatttgcagggacgaaaaccaaaaa 27409799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 4e-45; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 205 - 341
Target Start/End: Original strand, 19084045 - 19084181
Alignment:
Q  205 ttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaaca 304  Q
    ||||||||||||||||||| ||||||||||| ||||| |||  |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  19084045 ttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacatacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaaca 19084144  T
Q  305 cgcgaacttacagggacgatttacatatttaagcttt 341  Q
    ||| || ||||||||||| ||||||||||||||||||    
T  19084145 cgctaaattacagggacggtttacatatttaagcttt 19084181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 345
Target Start/End: Original strand, 1258361 - 1258505
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttat-aacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaa 300  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||||| ||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  1258361 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagtttattaacctataggggttgttttagaacaaaaaaagatacagggacgaaaaccaaa 1258460  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||    
T  1258461 aacacgccaaattacagggacgatttacatatttaagccttattt 1258505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 8745569 - 8745433
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  8745569 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacgggggttgttttagaacaaaaaaagatatagggacgaaaaccaaaa 8745470  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || |||||||||||||||||||||||||||    
T  8745469 acacgccaaattacagggacgatttacatatttaagc 8745433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 217 - 337
Target Start/End: Original strand, 8752737 - 8752857
Alignment:
Q  217 ttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttaca 316  Q
    ||||||| ||||||||||| ||||| |||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||    
T  8752737 ttgacgggagggacgaaaagcaaaaggttattaacttgcaggggttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattaca 8752836  T
Q  317 gggacgatttacatatttaag 337  Q
    | |||||||||||||||||||    
T  8752837 gagacgatttacatatttaag 8752857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 1256851 - 1256715
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| |||||||||||  |||| |||  ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  1256851 tttttgtaacagagtttgacgggagggacgaaaagtaaaaagttattaacttataggggttgttttagaataaaaaaagatacagggacgaaaaccaaaa 1256752  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| || ||||| |||||||||||||||||||||    
T  1256751 acacgccaaattacaaggacgatttacatatttaagc 1256715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 2956157 - 2956293
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| ||  ||||||| ||||||||||| ||||| |||  |||||||| || |||||||||||||||| ||||||||| |||||||||||||||    
T  2956157 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacgggagttgttttagaacaaaaaaagatacaaggacgaaaaccaaaa 2956256  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||   || |||||||||||||||||||||||||||    
T  2956257 acacatcaaattacagggacgatttacatatttaagc 2956293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 1443531 - 1443418
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||||||||| ||| | ||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  |    
T  1443531 agggactaaaaccaaaaagttaacaacttaccgggtttgttttagaacaaaaaaaaatacagggacgaaaaccaaaaacacgtgaacttacagggacctt 1443432  T
Q  325 ttacatatttaagc 338  Q
    | ||||||||||||    
T  1443431 tcacatatttaagc 1443418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 10699891 - 10699996
Alignment:
Q  232 aaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacata 331  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||| || || ||||||||||||||||||| | || ||| |||||    
T  10699891 aaaaccaaaacgtttataacttacaagggttgttttagaacaaaaaaagatacatggacaaatacaaaaaacacgcgaacttacacgaacaattcacata 10699990  T
Q  332 tttaag 337  Q
    ||||||    
T  10699991 tttaag 10699996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 10699344 - 10699231
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| | | |||||  ||||||||||||||||||| | ||  |    
T  10699344 agggaccaaaatcaaaacgtttataacttacagaggttgttttagaacaaaaaaagatacatgaaggaaaataaaaaacacgcgaacttacatgaacagt 10699245  T
Q  325 ttacatatttaagc 338  Q
    ||||||||||||||    
T  10699244 ttacatatttaagc 10699231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 10707786 - 10707677
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgat 324  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||| ||| |    ||||||||||||||  |||||||||||||||||||||||| ||    
T  10707786 agggaccaaaaccaaaacgtttataacttacgggggttgttatagaaaaaaaa----tacagggacgaaaataaaaaacacgcgaacttacagggacaat 10707691  T
Q  325 ttacatatttaagc 338  Q
    ||| ||||||||||    
T  10707690 ttatatatttaagc 10707677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 4496615 - 4496506
Alignment:
Q  227 ggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgattt 326  Q
    |||| |||||||||||| | |||||||||| || |||||||||||||||| ||  |||| |||||||||||||||||||| |||||||||  ||||||||    
T  4496615 ggaccaaaaccaaaacgatgataacttacatggtttgttttagaacaaattaa--tacatggacgaaaaccaaaaacacgtgaacttacaatgacgattt 4496518  T
Q  327 acatatttaagc 338  Q
    || |||||||||    
T  4496517 acctatttaagc 4496506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 4296344 - 4296462
Alignment:
Q  218 tgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacag 317  Q
    |||||| | |||| ||||||||||||||||||||||||| || || |||||||||||| ||||||||| | |||||||  ||||||||| ||||||||||    
T  4296344 tgacggcatggaccaaaaccaaaacgtttataacttacacggtttattttagaacaaa-aaagatacatgaacgaaaataaaaaacacgtgaacttacag 4296442  T
Q  318 ggacgatttacatatttaag 337  Q
      ||||||||| ||||||||    
T  4296443 aaacgatttacctatttaag 4296462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 7678565 - 7678705
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgtttt----agaacaaataaagatacagggacgaaaacc 297  Q
    |||||||||| |||| | |||| ||||||||||| ||||||||| | |||||||||||   |||||    |||| ||| ||||||||| |||| |||| |    
T  7678565 tttttgtaacagaagctaacgggagggacgaaaagcaaaacgttaacaacttacagggacagttttgaaaagaaaaaaaaaagatacaaggacaaaaagc 7678664  T
Q  298 aaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  7678665 aaaaacacgccaaattacagggacgatttacatatttaagc 7678705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 19082803 - 19082713
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacga 292  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| | |||||||||||||||||| |||| |||||||||||    
T  19082803 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatatgggttgttttagaacaaaaaaagttacagggacga 19082713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 33469751 - 33469856
Alignment:
Q  232 aaaaccaaaacgttt-ataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacat 330  Q
    |||| |||||||||| |||||||||||||  ||||||| |||||  ||||||||||| |||||||  |||||||| ||||||||||||||| ||| ||||    
T  33469751 aaaagcaaaacgttttataacttacagggtctgttttaaaacaagaaaagatacaggaacgaaaataaaaaacacacgaacttacagggacaattcacat 33469850  T
Q  331 atttaa 336  Q
    ||||||    
T  33469851 atttaa 33469856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 19596429 - 19596344
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||| |||  |||| |||| |||||||||||  |||||||||| |||||| ||||||||||||||||    
T  19596429 tacagggtttgttttagaacaaaaaaacttacaaggaccaaaaccaaaaatgcgcgaacttatagggacaatttacatatttaagc 19596344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 19597950 - 19598035
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||| |||  | || |||| |||||||||||  |||| |||||||||||| ||||||||||||||||    
T  19597950 tacagggtttgttttagaacaaaaaaacttgcaaggaccaaaaccaaaaatgcgcggacttacagggaccatttacatatttaagc 19598035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 28049096 - 28048981
Alignment:
Q  225 agggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagg--gacgaaaaccaaaaacacgcgaacttacagggacg 322  Q
    |||||| |||||||||| ||| | ||||||||||| | ||||||||||||| |||  |||| |  ||| |||||||||||||||||||||||||| |||     
T  28049096 agggactaaaaccaaaaggttaacaacttacagggttagttttagaacaaaaaaacttacaagcagacaaaaaccaaaaacacgcgaacttacagagacc 28048997  T
Q  323 atttacatatttaagc 338  Q
     || | ||||||||||    
T  28048996 tttgatatatttaagc 28048981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 842272 - 842187
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| || |||||||| ||| |||  ||||||||||||||| |||||  |||||||||||||||||  | |||||||||||||    
T  842272 tacagggtttattttagaaaaaaaaaacttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttatacatatttaagc 842187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 19579978 - 19579893
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||| ||||||||||||||| |||  |||| |||| |||||||||||  |||||||||| | |||  ||||||||||||||||    
T  19579978 tacagggtttgttttagaacaaaaaaacttacaaggaccaaaaccaaaaatgcgcgaacttatacggagcatttacatatttaagc 19579893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 11065656 - 11065712
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||  |||||||||||| ||||  |||||||||||||||    
T  11065656 tacagggacgaaaaccaaaaatgcgcgaacttacaaggaccttttacatatttaagc 11065712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 12599983 - 12599890
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttatttc 346  Q
    ||||||| |||||||| |||||| |||  || |||||||||||| |||||   ||||| ||||||| || | |||||||||||||| |||||||    
T  12599983 tacagggtttgttttataacaaaaaaacttaaagggacgaaaacaaaaaatgtgcgaaattacaggaaccacttacatatttaagccttatttc 12599890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 7796806 - 7796750
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||| |||||||||||  ||||||||||| |||||  |||||||||||||||    
T  7796806 tacagggacaaaaaccaaaaatgcgcgaacttactgggaccttttacatatttaagc 7796750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 843524 - 843579
Alignment:
Q  284 cagggacgaaaa-ccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||| |||||||  |||||||||||||||||  |||||||||||||||    
T  843524 cagggacgaaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 843579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 10711872 - 10711919
Alignment:
Q  236 ccaaaacgtttataacttacaggggttgttttagaacaaataaagata 283  Q
    ||||||| ||||||| ||||| |||||||||||||||||| |||||||    
T  10711872 ccaaaacatttataatttacatgggttgttttagaacaaagaaagata 10711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 30321145 - 30321220
Alignment:
Q  261 ttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||||| ||| ||   |||||||||||||||||||||  | ||||||||||| |||  |||||||||||||    
T  30321145 ttgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcacgaacttacagagaccttttacatatttaa 30321220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 10711324 - 10711224
Alignment:
Q  235 accaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatattt 334  Q
    |||||||| ||||||||||||  |||||||| ||||  ||| ||   |||||||| |||||  ||||||| | ||| ||||||| || ||||||||||||    
T  10711324 accaaaacatttataacttacgcgggttgttatagagaaaaaaa---tacagggaagaaaataaaaaacatgtgaatttacaggaacaatttacatattt 10711228  T
Q  335 aagc 338  Q
    ||||    
T  10711227 aagc 10711224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 28050335 - 28050384
Alignment:
Q  253 tacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaa 302  Q
    |||| |||||||||||||||||| |||  ||||| |||||||||||||||    
T  28050335 tacaagggttgttttagaacaaaaaaacttacagagacgaaaaccaaaaa 28050384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 19402124 - 19402180
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| |||||   ||||||||||| ||||  |||||||||||||||    
T  19402124 tacagggacgaaaacaaaaaatgtgcgaacttacaaggaccttttacatatttaagc 19402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 2188 - 2052
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| |||||| |||  |||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||    
T  2188 tttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacgggggttgttttagaacaaaaaaagatacagggacggaaaccaaaa 2089  T
Q  302 acacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| ||||  ||| |||||||||||    
T  2088 acacgcgaacttacaaggacatttttcatatttaagc 2052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1118 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 2549 - 2420
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    |||||||||| |||||| |||  |||||| ||||||||||||  ||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||    
T  2549 tttttgtaacagaagttaacgttagggactaaaaccaaaacgcgtataacttacaggggttgttttaaaataaaaaaagatatagggacgaaaaccaaaa 2450  T
Q  302 acacgcgaacttacagggacgatttacata 331  Q
    ||||||||||||||||||||  ||||||||    
T  2449 acacgcgaacttacagggaccttttacata 2420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 338
Target Start/End: Original strand, 6831 - 6952
Alignment:
Q  217 ttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttaca 316  Q
    ||||||| || |||||||| ||||| |||  |||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| || |||||    
T  6831 ttgacgggagagacgaaaagcaaaaagttattaacttacagaggttgttttagaacaaaaaaatatacagagacgaaaaccaaaaacacgccaaattaca 6930  T
Q  317 gggacgatttacatatttaagc 338  Q
    | ||||||||||||||||||||    
T  6931 gagacgatttacatatttaagc 6952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 338
Target Start/End: Original strand, 6740 - 6873
Alignment:
Q  205 ttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaaca 304  Q
    ||||||||||||||||||| ||||  ||||| ||||| |||  |||| |||||||| | |||||||||||| ||||||||||| || |||||||||||||    
T  6740 ttgtaacggaagttgacgggagggtagaaaatcaaaaagttattaacatacaggggatattttagaacaaaaaaagatacaggaacaaaaaccaaaaaca 6839  T
Q  305 cgcgaacttacagggacgatttacatatttaagc 338  Q
    ||| || |||||| ||||||||||||||||||||    
T  6840 cgccaaattacagagacgatttacatatttaagc 6873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 5518 - 5376
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgttta--taacttacaggggttgttttagaacaaataaagat--acagggacgaaaacc 297  Q
    |||||||||||||||||||||| |||||||||||  ||||   |||  ||||||| |||||||||||||||||||| |||  |  |||||||||||||||    
T  5518 tttttgtaacggaagttgacgggagggacgaaaataaaaaaagttaattaacttataggggttgttttagaacaaaaaaaagttaacagggacgaaaacc 5419  T
Q  298 aaaaac--acgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||   |||| || |||||||||||||||||||||||||||    
T  5418 aaaaaacaacgccaaattacagggacgatttacatatttaagc 5376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 12269 - 12132
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaac-aaataaagatacagggacgaaaaccaaa 300  Q
    ||||||| || |||||| |||  |||||| |||||||||| ||| | ||||||||||| |||||||||||  ||| ||||||||||||||||||||||||    
T  12269 tttttgtcacagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaagaaaaaaagatacagggacgaaaaccaaa 12170  T
Q  301 aacacgcgaacttacagggacgatttacatatttaagc 338  Q
    ||||||||||||||| || ||  |||||||||||||||    
T  12169 aacacgcgaacttaccggaaccttttacatatttaagc 12132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 226 - 336
Target Start/End: Original strand, 475 - 584
Alignment:
Q  226 gggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatt 325  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||||| | |||||   ||||  |||  |||||||||||| |||||| ||||||||    
T  475 gggaccaaaaccaaaacgtttataacttacagggtctgttttagaacaaaaagagata-ttggacagaaataaaaaacacgcgatcttacatggacgatt 573  T
Q  326 tacatatttaa 336  Q
    |||||||||||    
T  574 tacatatttaa 584  T

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Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 4259 - 4315
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||||||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  4259 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 4315  T

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Target: scaffold0512 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 323
Target Start/End: Original strand, 10048 - 10167
Alignment:
Q  202 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacaggggttgttttagaacaaataaagatacagggacgaaaaccaaaa 301  Q
    ||||||||||||| | ||| |  | |||| |||| |||||| |||||||||||||||||||| ||| | | ||| |||  ||||||||||||||| ||||    
T  10048 tttttgtaacggatgatgaagacatggactaaaatcaaaacatttataacttacaggggttgattttgtagaaaaaaa--tacagggacgaaaacaaaaa 10145  T
Q  302 acacgcgaacttacagggacga 323  Q
    | ||||||| ||||| ||||||    
T  10146 atacgcgaatttacaaggacga 10167  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 193660 - 193592
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| |||||| |||| |||||||||||||||    
T  193660 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattacagagacgttttacatatttaagc 193592  T

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Target: scaffold0524 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 7760 - 7701
Alignment:
Q  277 aaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 336  Q
    ||||||||||||||||    |||||||||||||| ||||||||||| |||||||||||||    
T  7760 aaagatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaa 7701  T

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Target: scaffold0524; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 9059 - 9127
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    ||||||||||| || ||||||||||| ||| |||||| ||||    
T  9059 aacaaaaaaagatacagggacgatttgcaaaaacacgcaaaattacagggacgttttgcatattaaagc 9127  T

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Target: scaffold0369 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 8260 - 8335
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagctttattt 345  Q
    |||||| ||||||| ||||||||    |||||||||||||| ||||||||||| ||| |||||| |||| ||||||    
T  8260 aacaaaaaaagatatagggacgatttgcaaaaacacgcgaaattacagggacgttttgcatattcaagccttattt 8335  T

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Target: scaffold0472 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 10436 - 10504
Alignment:
Q  270 aacaaataaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| ||||||||||||||||    |||||||||||||| ||| || || | |||||||||||||||    
T  10436 aacaaaaaaagatacagggacgatttgcaaaaacacgcgaaattatagagatgttttacatatttaagc 10504  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 13253 - 13309
Alignment:
Q  282 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagc 338  Q
    |||||| |||||||| |||||  || ||||||||||||||  |||||||||||||||    
T  13253 tacaggaacgaaaacaaaaaatgcgtgaacttacagggaccttttacatatttaagc 13309  T

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