View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19425_high_37 (Length: 373)
Name: NF19425_high_37
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19425_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 357
Target Start/End: Complemental strand, 48255223 - 48254868
Alignment:
| Q |
1 |
tttgtcactgggatcagccctttctcccttgctattcagctcaaccaaatgaaacaatttgcaaccaaagttaaagaagctgatcaacaaggtacataat |
100 |
Q |
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| T |
48255223 |
tttgtcactgggatcagccctttctcccttgctattcagctcacccaaatgaaacaatttgcaaccaaagttaaagaagctgatcaacaaggtacataat |
48255124 |
T |
|
| Q |
101 |
gcacaaactttctactcttataactggcactaacaattttaaaatggttcgaaaattacgtctgctactgcatctaagtttagtccttttaatttccttc |
200 |
Q |
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| T |
48255123 |
gcacaaactttctactcttataactggcactaacaattttaaaatggtttgaaaattacgtctggtactgcatctaagttta-tccttttaatttccttc |
48255025 |
T |
|
| Q |
201 |
gttaatatattaacatactattttcttttaattgttgctcagaaaccaaacttccatcaccagatatacttggaaaatctttgtatacattttatattgg |
300 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48255024 |
gttaatatattaacatactaatttcttttaattgttgctcagaaaccaaacttccatcaccagatatacttggaaaatctttgtatacattttatattgg |
48254925 |
T |
|
| Q |
301 |
ccaaaatgatttcacttccaacctagcagtcattggcacaggtggtgtgcaagagtt |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48254924 |
ccaaaatgatttcacttccaacctagcagtcattggcacaggtggtgtgcaagagtt |
48254868 |
T |
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