View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19425_high_60 (Length: 265)
Name: NF19425_high_60
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19425_high_60 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 44367527 - 44367781
Alignment:
| Q |
1 |
ttgggttgtacacgtatggtttgtcctaagatttttcatatgacataagtttgtttgcttaaaaaattataatttttatgatattcacatgatttttact |
100 |
Q |
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| T |
44367527 |
ttgggttgtacatgtatggtttgtcctaagatttttcatatgacataagtttgtttgcttaaaaaattataatttttatgatattcacatgatttttact |
44367626 |
T |
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| Q |
101 |
ccaataaaacattttatcacctacccgcatcttttgaattcacattgagaatgacaaaattacaatcacaatgaaccatataattttgaaactaatttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44367627 |
ccaataaaacattttatcacctacccgcatcttttgaattcacattgagaatgacaaaattacaatcacaatgaaccatataattttgaaactaatttct |
44367726 |
T |
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| Q |
201 |
gaagttccttagatatatacatggcaacatgttaggaattgacttgatatctctg |
255 |
Q |
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| T |
44367727 |
gaagttccttagatatatatatggcaacatgttaggaattgacttgatatctctg |
44367781 |
T |
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