View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19425_high_64 (Length: 258)
Name: NF19425_high_64
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19425_high_64 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 32598703 - 32598939
Alignment:
| Q |
6 |
agcagcacagaaacataaagtggaaatgagtattaggatattgtatataaacaccactaatcaacaattatcattataatcattttatactgtag---ta |
102 |
Q |
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| T |
32598703 |
agcaacacacaaacataaagtggaaatgagtattaggatattgtatataaacaccactaatcaacaattatcattataatcattttatactgtagtagta |
32598802 |
T |
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| Q |
103 |
ctagattgttttcattttgcataattactagtattattttaatctaaagagatttttgattggttgtttgtaaacacaagtatataataatgattcatgt |
202 |
Q |
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| T |
32598803 |
ctagattgttttcattttgcataattactagtattattttaatctaaagagatttttgattggttgttcgtaaacacaagtat---ataatgattcatgt |
32598899 |
T |
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| Q |
203 |
acgaatatctcacgtgaaaaagtgcaattaaacttgagag |
242 |
Q |
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| T |
32598900 |
acgaatatctcacgtgaaaaagtgcaattaaacttgagag |
32598939 |
T |
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