View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19425_high_80 (Length: 228)
Name: NF19425_high_80
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19425_high_80 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 46513673 - 46513488
Alignment:
| Q |
1 |
taaattctatacctgtacatggtcccacttaccctctgttgccggaatcggaaacgatgaacggcggaagcaccgtttccttccgatccatcctcgacag |
100 |
Q |
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| T |
46513673 |
taaattctatacctgtacatggtcccacttaccctctgttgccggaatcggaaacgatgaacggcggaagcaccgtttccttccgatccatcctcgacag |
46513574 |
T |
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| Q |
101 |
acctcttaaccaactcactgaagatgacatttctcaactcactcgcgaagactgtcgcagattcctcaaagataaaggtacctaac |
186 |
Q |
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| T |
46513573 |
acctcttaaccaactcactgaagatgacatttctcaactcactcgcgaagactgtcgcagattcctcaaagataaaggtacctaac |
46513488 |
T |
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