View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19425_low_11 (Length: 541)

Name: NF19425_low_11
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19425_low_11
NF19425_low_11
[»] chr2 (14 HSPs)
chr2 (107-525)||(10125892-10126326)
chr2 (11-105)||(10126323-10126416)
chr2 (218-310)||(33019110-33019201)
chr2 (226-287)||(11504024-11504084)
chr2 (227-308)||(32596033-32596113)
chr2 (220-281)||(33047538-33047598)
chr2 (217-308)||(8800649-8800741)
chr2 (235-287)||(43501186-43501237)
chr2 (218-285)||(9143040-9143106)
chr2 (237-291)||(680263-680316)
chr2 (241-291)||(16518837-16518886)
chr2 (218-310)||(13912827-13912918)
chr2 (214-270)||(37551175-37551230)
chr2 (267-307)||(39008968-39009008)
[»] chr8 (8 HSPs)
chr8 (222-308)||(37684447-37684532)
chr8 (237-310)||(32927932-32928004)
chr8 (218-308)||(32101115-32101204)
chr8 (241-310)||(16972041-16972109)
chr8 (221-290)||(36200086-36200154)
chr8 (264-308)||(32681303-32681347)
chr8 (227-291)||(15677773-15677841)
chr8 (237-287)||(9461511-9461560)
[»] chr6 (10 HSPs)
chr6 (221-308)||(25195323-25195409)
chr6 (218-310)||(4910948-4911039)
chr6 (222-310)||(17225892-17225979)
chr6 (237-291)||(3289804-3289856)
chr6 (235-310)||(3482086-3482160)
chr6 (265-310)||(434237-434282)
chr6 (235-291)||(6653873-6653930)
chr6 (237-310)||(34620926-34620998)
chr6 (237-310)||(34748363-34748435)
chr6 (222-310)||(33496667-33496754)
[»] chr7 (5 HSPs)
chr7 (237-291)||(32295243-32295296)
chr7 (241-310)||(25156240-25156308)
chr7 (237-307)||(45557408-45557477)
chr7 (260-301)||(525619-525660)
chr7 (217-308)||(30826360-30826449)
[»] chr5 (4 HSPs)
chr5 (218-308)||(42858150-42858239)
chr5 (218-310)||(18851036-18851127)
chr5 (267-308)||(6949674-6949715)
chr5 (259-308)||(6951299-6951348)
[»] chr3 (6 HSPs)
chr3 (218-308)||(52364093-52364182)
chr3 (237-291)||(31708212-31708265)
chr3 (226-291)||(40736498-40736564)
chr3 (214-287)||(52141198-52141270)
chr3 (264-308)||(54173314-54173358)
chr3 (237-308)||(34331686-34331756)
[»] chr1 (8 HSPs)
chr1 (218-311)||(38797584-38797675)
chr1 (218-310)||(2099641-2099733)
chr1 (237-310)||(7524153-7524225)
chr1 (218-310)||(3416120-3416211)
chr1 (235-310)||(30850366-30850444)
chr1 (241-288)||(34915128-34915174)
chr1 (238-291)||(30557561-30557613)
chr1 (236-308)||(34721812-34721883)
[»] chr4 (10 HSPs)
chr4 (218-291)||(16552014-16552086)
chr4 (237-310)||(35065103-35065175)
chr4 (218-259)||(39733594-39733635)
chr4 (218-310)||(21691166-21691257)
chr4 (268-308)||(26617510-26617550)
chr4 (218-281)||(39386702-39386764)
chr4 (237-303)||(43868183-43868248)
chr4 (216-310)||(45011914-45012007)
chr4 (265-293)||(52965854-52965882)
chr4 (218-286)||(53713515-53713582)


Alignment Details
Target: chr2 (Bit Score: 330; Significance: 0; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 107 - 525
Target Start/End: Complemental strand, 10126326 - 10125892
Alignment:
Q  107 tttgagaaataaaatggtttaaatggattagtggtcccatgtaactttctcatctagcccttgacgtgtgtttgattgataggtggggagaagtgagttt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10126326 tttgagaaataaaatggtttaaatggattagtggtcccatgtaacttcctcatctagcccttgacgtgtgtttgattgataggtggggagaagtgagttt 10126227  T
Q  207 gatataattgattaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaa 306  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||||||    
T  10126226 gatagaattgattaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaa-attaaagtgagttgaattataaatttatttatgaaaatcaa 10126128  T
Q  307 ttcttacaaaccctaattttaagtat------------------aatcaatttcattcgacgacaacaaaatatatcagaatcaatttaatatctcccaa 388  Q
    ||||||||||||||||||||||||||                  ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  10126127 ttcttacaaaccctaattttaagtataatcaattctgaaagcaaaatcaatttcattcgacaacaaccaaatatatcagaatcaattcaatatctcccaa 10126028  T
Q  389 atcaattatgatcctctaaagtggaaccaaatacacatttgtttttcaccataattttaagaaactctaatgtgtagtgtggtatttggtttatcgtgat 488  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10126027 atcaattatgat-ctctaaagtggaaccaaatacacatttgtttttcaccataattttaagaaactctaatgtgtagtgtggtatttggtttatcgtgat 10125929  T
Q  489 ttgtgtgtttttcaaacacatactaaccaggtttatc 525  Q
    |||||||||||||||||||||||||||||||||||||    
T  10125928 ttgtgtgtttttcaaacacatactaaccaggtttatc 10125892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 10126323 - 10126416
Alignment:
Q  11 caaaggtaataataaagctacatggctgactatagtccaacttcatacaagttcatctaaaagataattgaggctcatatcatagacatcatata 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  10126323 caaaggtaataataa-gctacatggctgactatagtccaacttcataaaagttcatctaaaagataattgaggctaatatcatagacatcatata 10126416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 33019110 - 33019201
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||| ||| ||| ||||||||||||||||||| || || || |||||||||||||||||| ||||||||||| | | ||||||||||||    
T  33019110 ttaaaagtgattctgactaaaagtgatttgtgtttggatgca-ttcatgtaaaagtgagttgaactataaatttatgtgtgaaaatcaattct 33019201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 11504024 - 11504084
Alignment:
Q  226 aattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataa 287  Q
    ||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  11504024 aatttcgattaaaagtgatttgtgttttaatac-attcatgtaaaagtgagttgaactataa 11504084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 32596113 - 32596033
Alignment:
Q  227 attttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||| |||||||||| ||||||||| ||| | ||| ||||||||||||||||||||| ||||| | | ||||||||||||    
T  32596113 attttggttaaaagtgaattgtgtttggatatattta-tgtaaaagtgagttgaattatgaatttgtatgtaaaaatcaatt 32596033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 33047538 - 33047598
Alignment:
Q  220 aaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaa 281  Q
    |||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||| ||||    
T  33047538 aaaagtaattatgattaaaagtgatttgtgtttggatac-atttatgtaaaagtgaggtgaa 33047598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 8800649 - 8800741
Alignment:
Q  217 attaaaagtaattttgattaaaagtg--atttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||||||||||||  |||||| ||  |||| |||||| ||||  || |||||||||||||||||||||||||||| | ||| ||||||||||    
T  8800649 attaaaagtaattttttttaaaaatgtaatttatgtttggatacg-ttcatgtaaaagtgagttgaattataaatttgtatattaaaatcaatt 8800741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 43501237 - 43501186
Alignment:
Q  235 taaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataa 287  Q
    ||||||||||||||||||| |||| ||| |||||||| |||||||||||||||    
T  43501237 taaaagtgatttgtgtttgtatac-attcatgtaaaactgagttgaattataa 43501186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 9143106 - 9143040
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattat 285  Q
    ||||| |||||||||| ||||| || ||| ||||||||||| ||| ||||||| ||||||||||||||    
T  9143106 ttaaatgtaattttgactaaaaatggtttttgtttgaatac-attcatgtaaatgtgagttgaattat 9143040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 680263 - 680316
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaattt 291  Q
    |||||| |||||||||| ||||| || |||||||||||||||||||| |||||||    
T  680263 aaagtgttttgtgtttgcataca-ttcatgtaaaagtgagttgaattctaaattt 680316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 16518886 - 16518837
Alignment:
Q  241 tgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaattt 291  Q
    ||||||||||||| ||||| || |||||||||||||||||| |||||||||    
T  16518886 tgatttgtgtttggataca-ttcatgtaaaagtgagttgaactataaattt 16518837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 13912918 - 13912827
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||| ||||| |||  |||||||||||||||||| |||||| | |||||||| |||||||||   ||||||| | | ||||||| ||||||    
T  13912918 ttaaaattaattctgacaaaaagtgatttgtgtttggatacaa-tcatgtaaaaatgagttgaacggtaaatttgtgtgtaaaaattaattct 13912827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 37551175 - 37551230
Alignment:
Q  214 ttgattaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaa 270  Q
    ||||||||||||||||   |||||| ||||||||| ||||||||| |||||||||||    
T  37551175 ttgattaaaagtaattcgtattaaatgtgatttgtatttgaatac-attaatgtaaa 37551230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 39008968 - 39009008
Alignment:
Q  267 taaaagtgagttgaattataaatttatttataaaaatcaat 307  Q
    ||||||||||||||||||||||||||| | ||||| |||||    
T  39008968 taaaagtgagttgaattataaatttatgtgtaaaattcaat 39009008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 6e-20; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 37684532 - 37684447
Alignment:
Q  222 aagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| |  || ||||||||||    
T  37684532 aagtaattttgactaaaagtgatttgtgtttggatac-atttatgtaaaagtgagttgaattataaatttttgcattaaaatcaatt 37684447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 32928004 - 32927932
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    ||||||||||||||||| ||||| || |||||||||||||||||| ||||||||| | | ||||||| ||||||    
T  32928004 aaagtgatttgtgtttggataca-ttcatgtaaaagtgagttgaactataaatttgtgtgtaaaaatgaattct 32927932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 32101204 - 32101115
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||| |||||  ||| ||||||||||||||| || ||||| ||| ||||||||||||||||| ||||||||| | ||| ||||| ||||    
T  32101204 ttaaaaataattacgatcaaaagtgatttgtgtgtggatacattta-tgtaaaagtgagttgaactataaatttgtatatgaaaattaatt 32101115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 241 - 310
Target Start/End: Original strand, 16972041 - 16972109
Alignment:
Q  241 tgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    ||||||||||||||||||| || |||||||||||| |||||  |||||||| | | ||||||||||||||    
T  16972041 tgatttgtgtttgaataca-ttcatgtaaaagtgatttgaacaataaatttgtgtttaaaaatcaattct 16972109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 36200086 - 36200154
Alignment:
Q  221 aaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatt 290  Q
    ||||||||| ||| ||||| ||||||||| || |||||| || |||||||||||| ||||||||||||||    
T  36200086 aaagtaattctgactaaaaatgatttgtgcttcaataca-ttcatgtaaaagtgaattgaattataaatt 36200154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 32681303 - 32681347
Alignment:
Q  264 atgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||||||||||||||||||||||||| | | ||||||||||||    
T  32681303 atgtaaaagtgagttgaattataaatttgtgtttaaaaatcaatt 32681347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 15677773 - 15677841
Alignment:
Q  227 attttgattaaaagtgatttgtgtttgaataca----attaatgtaaaagtgagttgaattataaattt 291  Q
    |||||||||||||||||||||||||| ||||||    ||| |||||| | ||||||||| |||||||||    
T  15677773 attttgattaaaagtgatttgtgttttaatacaatatattcatgtaacaatgagttgaactataaattt 15677841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 9461511 - 9461560
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataa 287  Q
    ||||||||||||||||| ||||| || || |||||||||||||||||||||    
T  9461511 aaagtgatttgtgtttggataca-ttcatataaaagtgagttgaattataa 9461560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 221 - 308
Target Start/End: Original strand, 25195323 - 25195409
Alignment:
Q  221 aaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    ||||||||| | ||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||| | ||| ||||||||||    
T  25195323 aaagtaattctaattaaaagtgatttgtgtttggatacattta-tgtaaaagtgagttgaattgtaaatttgtgtatgaaaatcaatt 25195409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 4911039 - 4910948
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||||| ||| |||||||||||| |||||| |||| ||| |||||||||||||| ||| ||||||||| | | | ||||||||||||    
T  4911039 ttaaaagtaattctgactaaaagtgatttatgtttggatac-atttatgtaaaagtgagtcgaactataaatttgtatgtgaaaatcaattct 4910948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 310
Target Start/End: Complemental strand, 17225979 - 17225892
Alignment:
Q  222 aagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||||||||||| |||| |||| ||  ||||| || |||||||| ||||||||| ||||||||| | | ||||||||||||||    
T  17225979 aagtaattttgattaaaaatgatatgtggtttgataca-ttcatgtaaaactgagttgaactataaatttgtatgtaaaaatcaattct 17225892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 3289856 - 3289804
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaattt 291  Q
    ||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||    
T  3289856 aaagtgatttgtgtttggatacatt--atgtaaaagtgagttgaattataaattt 3289804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 3482160 - 3482086
Alignment:
Q  235 taaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||| |||||| || | | | ||||||||||||    
T  3482160 taaaagtgatttgtgtttgaatac-attcatgtaaaagtaagttgaactataaacttgtgtgtgaaaatcaattct 3482086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 434237 - 434282
Alignment:
Q  265 tgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||    
T  434237 tgtaaaagtgagttgaaatttaaatttatgtataaaaatcaattct 434282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 6653930 - 6653873
Alignment:
Q  235 taaaagtgatttgtgtttgaatacaatta-atgtaaaagtgagttgaattataaattt 291  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||| || |||||||||    
T  6653930 taaaagtgatttgtgtttggatacaatcatatgtaaaagtgagttaaactataaattt 6653873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 34620998 - 34620926
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||| |||||| ||||| ||| |||||||||||||||||  ||||||||   | ||||||||||||||    
T  34620998 aaagtgatttatgtttggatacattta-tgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattct 34620926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 34748435 - 34748363
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||| |||||| ||||| ||| |||||||||||||||||  ||||||||   | ||||||||||||||    
T  34748435 aaagtgatttatgtttggatacattta-tgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattct 34748363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 310
Target Start/End: Complemental strand, 33496754 - 33496667
Alignment:
Q  222 aagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||| |||||| |||||||||| |||||  |||| ||  ||| ||||| ||||||||||||||||| | | ||||||| ||||||    
T  33496754 aagtaattctgattagaagtgatttgcgtttggctacatttt-tgttaaagtaagttgaattataaatttgtatgtaaaaataaattct 33496667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 32295296 - 32295243
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaattt 291  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  32295296 aaagtgatttgtgttttaatacattta-tgtaaaagtgagttgaattataaattt 32295243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 25156308 - 25156240
Alignment:
Q  241 tgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    ||||||||||||||||||| || || |||||||||||||| |||| ||||||| | ||||||||||||||    
T  25156308 tgatttgtgtttgaataca-ttcatataaaagtgagttgatttattaatttatgtgtaaaaatcaattct 25156240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 45557477 - 45557408
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaat 307  Q
    ||||||||||||||||| ||||| || |||||||||||||||||  || |||||| | | |||||||||||    
T  45557477 aaagtgatttgtgtttggataca-ttcatgtaaaagtgagttgagctacaaatttgtgtgtaaaaatcaat 45557408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 525619 - 525660
Alignment:
Q  260 attaatgtaaaagtgagttgaattataaatttatttataaaa 301  Q
    |||||||||||| |||||| |||||||||||||| |||||||    
T  525619 attaatgtaaaaatgagttaaattataaatttatgtataaaa 525660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 30826449 - 30826360
Alignment:
Q  217 attaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||||||||||||||  |||| |||||| ||||| ||| || |  || |||||||||  | ||||||||||||||  |||||||||||||    
T  30826449 attaaaagtaattttgaacaaaaatgatttatgtttcaatgcatt--atataaaagtgaactaaattataaatttatacataaaaatcaatt 30826360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 42858239 - 42858150
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||| | ||| ||| |||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||| | | | ||||||||||    
T  42858239 ttaaaaatgattctgactaaaagtgatctgtgtttgaata-aattcatgtaaaagtgagttgaactataaatttgtgtgtgaaaatcaatt 42858150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 18851036 - 18851127
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||||||||| |||| ||| |||||||||| ||| | || ||||||||||||||| || ||||||| | | | | ||||||||||||    
T  18851036 ttaaaagtaattttgactaaatgtggtttgtgtttggata-acttcatgtaaaagtgagtttaactataaatatgtgtgtgaaaatcaattct 18851127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 6949715 - 6949674
Alignment:
Q  267 taaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||    
T  6949715 taaaagtgagttggattataaatttatgtatgaaaatcaatt 6949674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 6951299 - 6951348
Alignment:
Q  259 aattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||| |||||||||||| ||||||||||||||||| | || |||||||||    
T  6951299 aattcatgtaaaagtgaattgaattataaatttatgtgtacaaatcaatt 6951348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 52364182 - 52364093
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||||||||| | ||||||| |||||||||||| |||| | || |||||||||||||||||| | ||||||||| | | ||||||||||    
T  52364182 ttaaaagtaattctaattaaaattgatttgtgtttaaata-attttatgtaaaagtgagttgaactgtaaatttatgtttgaaaatcaatt 52364093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 31708212 - 31708265
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaattt 291  Q
    |||||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  31708212 aaagtggtttgtgtttggataca-ttcatgtaaaagtgagttgaattataaattt 31708265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 40736498 - 40736564
Alignment:
Q  226 aattttgattaaaagtgatttgtgtttgaataca-attaatgtaaaagtgagttgaattataaattt 291  Q
    |||||| ||||||| ||||||||||||||||||| |||||| ||||| | | |||||||||||||||    
T  40736498 aattttaattaaaaatgatttgtgtttgaatacatattaatataaaaattaattgaattataaattt 40736564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 52141198 - 52141270
Alignment:
Q  214 ttgattaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataa 287  Q
    |||||||||||||||| ||| |||||||  ||||||||| ||||| ||| || ||||||||||||||| |||||    
T  52141198 ttgattaaaagtaattctgactaaaagtagtttgtgtttaaatac-attcatataaaagtgagttgaactataa 52141270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 54173314 - 54173358
Alignment:
Q  264 atgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||    
T  54173314 atgtaaaagtgagttgaactataaatttatttgtaaaaattaatt 54173358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 34331756 - 34331686
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    ||||| ||||||||||||||||| ||| | ||||||||| ||||||| ||| ||||| | ||||||||||||    
T  34331756 aaagtaatttgtgtttgaatacattta-tataaaagtgaattgaattttaactttatgtctaaaaatcaatt 34331686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 38797584 - 38797675
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattctt 311  Q
    |||||| ||| |||||||||||||||||| |||||| |||||  | || ||||||||||||||| ||||||||| | | | |||||||||||||    
T  38797584 ttaaaaataaatttgattaaaagtgatttatgtttgcataca--ttatttaaaagtgagttgaactataaatttgtgtgtgaaaatcaattctt 38797675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 2099641 - 2099733
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgt-aaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||| || | |||| ||||||||  ||||||||||| | | ||||||||||||    
T  2099641 ttaaaagtaattttgagtaaaagtgatttgtgtttggatac-attcatataaaaaatgagttgagctataaatttatgtgtgaaaatcaattct 2099733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 7524225 - 7524153
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    ||||||||||||||||| | ||| ||| ||||||||||||||||| ||||||||| | | ||||||||||||||    
T  7524225 aaagtgatttgtgtttggacacattta-tgtaaaagtgagttgaactataaatttgtgtgtaaaaatcaattct 7524153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 3416211 - 3416120
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||||| ||||||||||| |||||| |||| |||| ||  || ||||| |||||| || ||||||||| | | ||||||||||||||    
T  3416211 ttaaaagtaattctgattaaaagttatttgtctttggatac-atccatataaaattgagttaaactataaatttgtgtgtaaaaatcaattct 3416120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 30850366 - 30850444
Alignment:
Q  235 taaaagtgatttgtgtttgaataca---attaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    ||||| |||||||| ||||||||||   ||| |||||||||||||||||| ||||||||| | | | ||||||||||||    
T  30850366 taaaaatgatttgtatttgaatacattcattcatgtaaaagtgagttgaactataaatttgtatgttaaaatcaattct 30850444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 34915174 - 34915128
Alignment:
Q  241 tgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaa 288  Q
    |||||| |||||||||||| || |||||||||||||||||||||||||    
T  34915174 tgatttatgtttgaataca-ttcatgtaaaagtgagttgaattataaa 34915128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 30557613 - 30557561
Alignment:
Q  238 aagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaattt 291  Q
    |||||||||||||||| ||||| || || ||||||||||||||| |||||||||    
T  30557613 aagtgatttgtgtttggataca-ttcatataaaagtgagttgaactataaattt 30557561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 34721812 - 34721883
Alignment:
Q  236 aaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    ||||||||||||| ||||||||| ||| |||||||||| ||| ||| ||||||||| | | | ||||||||||    
T  34721812 aaaagtgatttgtatttgaatac-attgatgtaaaagtaagtcgaactataaatttgtgtgtgaaaatcaatt 34721883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 16552086 - 16552014
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaattt 291  Q
    |||||||||||| |||||||| |||||||| | ||| ||||| || |||||||||||||||||| |||||||||    
T  16552086 ttaaaagtaattatgattaaacgtgatttgagattggataca-ttcatgtaaaagtgagttgaactataaattt 16552014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 35065175 - 35065103
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    ||||||||||||||||| ||||| || |||||||||||||| ||  ||||||||| | | ||||||||||||||    
T  35065175 aaagtgatttgtgtttggataca-ttcatgtaaaagtgagtggagatataaatttgtgtgtaaaaatcaattct 35065103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 39733594 - 39733635
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaataca 259  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  39733594 ttaaaagtaattctgattaaaagtgatttgtgtttggataca 39733635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 21691166 - 21691257
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||| ||| ||| || |||||||||||||||| ||| | || ||||||||||| |||||| ||||||||| | | | ||||||||||||    
T  21691166 ttaaaagtgattctgactacaagtgatttgtgtttggatata-ttcatgtaaaagtgtgttgaactataaatttgtgtgtgaaaatcaattct 21691257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 26617550 - 26617510
Alignment:
Q  268 aaaagtgagttgaattataaatttatttataaaaatcaatt 308  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  26617550 aaaactgagttgaattataaatttatctataaaaatcaatt 26617510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 39386764 - 39386702
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaa 281  Q
    |||||||| |||||||||||||||| ||| ||||| ||||  ||| ||||||||||||||||||    
T  39386764 ttaaaagtgattttgattaaaagtggtttttgtttaaata-tattcatgtaaaagtgagttgaa 39386702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 43868248 - 43868183
Alignment:
Q  237 aaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaat 303  Q
    |||||||||||| |||| ||||| ||| ||||||||||| || |||||||||||||| | |||||||    
T  43868248 aaagtgatttgtctttggatacattta-tgtaaaagtgacttaaattataaatttatatgtaaaaat 43868183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 45012007 - 45011914
Alignment:
Q  216 gattaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattataaatttatttataaaaatcaattct 310  Q
    |||||||||| ||| | | |||||||| |||| ||||||||||| || || |||||||||||  |||||||||||| | | | ||||||||||||    
T  45012007 gattaaaagtgattctcactaaaagtggtttgggtttgaataca-ttcatataaaagtgagtaaaattataaatttgtgtgtgaaaatcaattct 45011914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 293
Target Start/End: Original strand, 52965854 - 52965882
Alignment:
Q  265 tgtaaaagtgagttgaattataaatttat 293  Q
    |||||||||||||||||||||||||||||    
T  52965854 tgtaaaagtgagttgaattataaatttat 52965882  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 53713515 - 53713582
Alignment:
Q  218 ttaaaagtaattttgattaaaagtgatttgtgtttgaatacaattaatgtaaaagtgagttgaattata 286  Q
    |||||||||||||||| ||||  | ||||||||||| | || ||| |||||||||||||||||| ||||    
T  53713515 ttaaaagtaattttgactaaacataatttgtgtttggacac-attcatgtaaaagtgagttgaactata 53713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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