View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19425_low_30 (Length: 405)

Name: NF19425_low_30
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19425_low_30
NF19425_low_30
[»] chr1 (20 HSPs)
chr1 (1-390)||(14074418-14074807)
chr1 (256-356)||(14082074-14082173)
chr1 (18-82)||(13276331-13276395)
chr1 (10-80)||(12513283-12513353)
chr1 (10-83)||(23528655-23528728)
chr1 (26-82)||(9955108-9955164)
chr1 (10-82)||(25146825-25146897)
chr1 (10-82)||(30619075-30619147)
chr1 (10-82)||(9327272-9327344)
chr1 (26-82)||(9352136-9352192)
chr1 (10-82)||(12800638-12800710)
chr1 (10-82)||(21846325-21846397)
chr1 (26-80)||(19010019-19010073)
chr1 (10-78)||(13100195-13100263)
chr1 (26-82)||(18304884-18304940)
chr1 (28-75)||(16125533-16125580)
chr1 (27-81)||(42180139-42180193)
chr1 (26-82)||(9128913-9128969)
chr1 (26-82)||(34478843-34478899)
chr1 (10-82)||(41032727-41032799)
[»] chr5 (10 HSPs)
chr5 (10-82)||(18051587-18051659)
chr5 (18-81)||(23172497-23172560)
chr5 (1-83)||(38158302-38158384)
chr5 (10-82)||(21059212-21059284)
chr5 (26-84)||(20923716-20923774)
chr5 (26-82)||(22645792-22645848)
chr5 (10-74)||(27340243-27340307)
chr5 (26-82)||(43234868-43234924)
chr5 (10-81)||(18843716-18843787)
chr5 (10-80)||(19042446-19042516)
[»] chr4 (9 HSPs)
chr4 (10-82)||(5362020-5362092)
chr4 (10-84)||(8011273-8011347)
chr4 (10-82)||(13551679-13551751)
chr4 (31-82)||(9149813-9149864)
chr4 (26-82)||(13023567-13023624)
chr4 (10-81)||(7044728-7044799)
chr4 (26-82)||(4156763-4156819)
chr4 (26-82)||(8889228-8889284)
chr4 (25-81)||(17466080-17466136)
[»] chr7 (20 HSPs)
chr7 (10-82)||(22687721-22687793)
chr7 (10-82)||(24725534-24725606)
chr7 (26-82)||(11326386-11326442)
chr7 (26-82)||(44944922-44944978)
chr7 (10-82)||(7730400-7730471)
chr7 (10-82)||(9685301-9685373)
chr7 (10-82)||(26281366-26281438)
chr7 (10-82)||(27221418-27221490)
chr7 (31-82)||(5715290-5715341)
chr7 (10-80)||(8346590-8346660)
chr7 (32-82)||(39182260-39182310)
chr7 (10-82)||(8343857-8343929)
chr7 (26-81)||(5058530-5058585)
chr7 (31-82)||(21846503-21846554)
chr7 (28-83)||(24990146-24990201)
chr7 (14-83)||(4247355-4247424)
chr7 (26-75)||(8571250-8571299)
chr7 (26-82)||(8330118-8330174)
chr7 (10-82)||(14055251-14055323)
chr7 (10-82)||(14365279-14365351)
[»] chr6 (16 HSPs)
chr6 (10-82)||(6943517-6943589)
chr6 (26-82)||(7223519-7223575)
chr6 (10-82)||(30912469-30912541)
chr6 (26-83)||(15528183-15528240)
chr6 (10-63)||(23897830-23897883)
chr6 (26-82)||(26053369-26053425)
chr6 (26-82)||(26073422-26073478)
chr6 (10-82)||(17543797-17543869)
chr6 (18-79)||(2912312-2912373)
chr6 (26-82)||(7918454-7918510)
chr6 (26-82)||(17250057-17250113)
chr6 (10-82)||(5422805-5422877)
chr6 (31-75)||(8545043-8545087)
chr6 (26-78)||(10509096-10509148)
chr6 (34-82)||(17103202-17103250)
chr6 (26-82)||(27233350-27233406)
[»] chr3 (10 HSPs)
chr3 (10-82)||(28745770-28745842)
chr3 (10-82)||(17796377-17796449)
chr3 (10-82)||(19104817-19104889)
chr3 (10-82)||(29067284-29067356)
chr3 (28-81)||(3449366-3449419)
chr3 (26-82)||(27676356-27676412)
chr3 (10-82)||(24649746-24649818)
chr3 (18-82)||(25870441-25870505)
chr3 (10-82)||(24620257-24620332)
chr3 (26-82)||(20756039-20756095)
[»] chr2 (10 HSPs)
chr2 (10-82)||(31238034-31238106)
chr2 (11-82)||(36429848-36429919)
chr2 (26-82)||(1404783-1404839)
chr2 (10-84)||(19491853-19491929)
chr2 (26-82)||(23863394-23863450)
chr2 (10-82)||(30432419-30432491)
chr2 (10-81)||(35566011-35566082)
chr2 (26-82)||(1690835-1690891)
chr2 (10-82)||(15588907-15588978)
chr2 (26-86)||(31578001-31578061)
[»] scaffold0510 (1 HSPs)
scaffold0510 (10-63)||(158-211)
[»] chr8 (11 HSPs)
chr8 (10-81)||(29384373-29384444)
chr8 (26-82)||(477120-477176)
chr8 (26-82)||(5922049-5922105)
chr8 (10-82)||(11879600-11879672)
chr8 (10-82)||(11897016-11897088)
chr8 (10-82)||(17646993-17647065)
chr8 (10-80)||(15294672-15294742)
chr8 (10-80)||(15475041-15475111)
chr8 (10-63)||(22910259-22910312)
chr8 (26-82)||(24056641-24056697)
chr8 (10-78)||(31424167-31424235)
[»] scaffold0186 (1 HSPs)
scaffold0186 (26-82)||(8443-8499)
[»] scaffold0603 (1 HSPs)
scaffold0603 (10-82)||(9077-9149)
[»] scaffold0048 (1 HSPs)
scaffold0048 (10-82)||(48845-48917)


Alignment Details
Target: chr1 (Bit Score: 366; Significance: 0; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 14074418 - 14074807
Alignment:
Q  1 tactccggctttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaattactttaccttattagtc 100  Q
    ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14074418 tactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaattactttaccttattagtc 14074517  T
Q  101 cacttttggaaggatattttcagattgtgggtgtggcacaacgaaatggtggtttctcatcggtgtaaatttggtttgaacacttaacaaaatacaacgc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14074518 cacttttggaaggatattttcagattgtgggtgtggcacaacgaaatggtggtttctcatcggtgtaaatttgatttgaacacttaacaaaatacaacgc 14074617  T
Q  201 gcacaccatacaaattttcttatctataagagtcgtcaacaaggctttttgaattgccaagcaactcaaaccaagactaattaataatgtttacgaacaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14074618 gcacaccatacaaattttcttatctataagagtcgtcaacaaggctttttgaattgccaagcaactcaaaccaagactaattaataatgtttacgaacaa 14074717  T
Q  301 tagatcacacaccaaattacacgttactcaagcttgatagttgaaatgagtacaatatcgggctcatcgagcctgataattgaaattagt 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14074718 tagatcacacaccaaattacacgttactcaagcttgatagttgaaatgagtacaatatcggactcatcgagcctgataattgaaattagt 14074807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 356
Target Start/End: Original strand, 14082074 - 14082173
Alignment:
Q  256 gccaagcaactcaaaccaagactaattaataatgtttacgaacaatagatcacacaccaaattacacgttactcaagcttgatagttgaaatgagtacaa 355  Q
    |||||||||||||||| |||||||| ||| |||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||||||    
T  14082074 gccaagcaactcaaacaaagactaactaacaatgtttacggacaatagatcacccaccaaatcaca-gttactcaagcttgataattgaaatgagtacaa 14082172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 13276331 - 13276395
Alignment:
Q  18 gttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||    
T  13276331 gttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 12513353 - 12513283
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaaca 80  Q
    ||||||| ||||||  |||||||||||||||||||||| ||| ||||||||||| | ||||||||||||||    
T  12513353 tttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 23528728 - 23528655
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaatt 83  Q
    ||||||| |||||| ||||||||||||||||||||||  |||||| ||||||||   |||||||||||||||||    
T  23528728 tttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaatt 23528655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 9955108 - 9955164
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  9955108 tgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 9955164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 25146825 - 25146897
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||| ||  ||||||||||||||| | ||||||||||||||||    
T  25146825 tttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaat 25146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 30619147 - 30619075
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||| ||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  30619147 tttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 9327272 - 9327344
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  || |||||||||||||| |||| ||||||||||||||| | ||||||| ||||||||    
T  9327272 tttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaacaat 9327344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 9352136 - 9352192
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||||| |||  ||||||||||||||| | ||||||||||||||||    
T  9352136 tgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaat 9352192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 12800638 - 12800710
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||| ||||||||| |||||||||||||||   ||||||| ||||||||    
T  12800638 tttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 21846325 - 21846397
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||| ||||||||||||||||  ||||||||||||||  | ||||||||||||||||    
T  21846325 tttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaat 21846397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 19010019 - 19010073
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaaca 80  Q
    |||| ||||||||||||||||  ||||||||||||||| | ||||||||||||||    
T  19010019 tgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 13100263 - 13100195
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaa 78  Q
    ||||||| ||||||| |||||||||||| ||||||||  ||||||| |||||||   ||||||||||||    
T  13100263 tttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaa 13100195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18304884 - 18304940
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||| ||  |||||||||||||||   ||||||||||||||||    
T  18304884 tgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaat 18304940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 16125533 - 16125580
Alignment:
Q  28 aagaaagtcgcaaaatcctacattttaggatttaagactggattttga 75  Q
    |||||||||||||||||||  ||||||||||||||| | |||||||||    
T  16125533 aagaaagtcgcaaaatcctgaattttaggatttaagtcaggattttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 42180139 - 42180193
Alignment:
Q  27 gaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    ||||||||||||||||||||  ||||||| |||||||   |||||||||||||||    
T  42180139 gaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 9128913 - 9128969
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||| ||||||  |||||||||||||| |  |||||| ||||||||    
T  9128913 tgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 34478843 - 34478899
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||| |||||||| | |||||| |||||||| | ||||||| ||||||||    
T  34478843 tgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaat 34478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 41032727 - 41032799
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||| ||||||||||||  ||| || |||||||| |  |||||||||||||||    
T  41032727 tttgagtcgttgaaggtgaagaaaatcgcaaaatcctgaattctacgatttaagtcgagattttgacaacaat 41032799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 18051587 - 18051659
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  18051587 tttgagtcgttgaagttgaagaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaat 18051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 23172497 - 23172560
Alignment:
Q  18 gttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  23172497 gttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38158302 - 38158384
Alignment:
Q  1 tactccggctttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaatt 83  Q
    ||||| || ||||||||||||||  | |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||    
T  38158302 tactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 38158384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 21059212 - 21059284
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||    
T  21059212 tttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 21059284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 20923774 - 20923716
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaatta 84  Q
    |||||||||||||||||| ||  ||||||||||||||| | ||||||||||||||||||    
T  20923774 tgaagaaagtcgcaaaattctggattttaggatttaagtcgggattttgacaacaatta 20923716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 22645792 - 22645848
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||| ||  ||||||||||||||| | ||||||||||||||||    
T  22645792 tgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaat 22645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 27340243 - 27340307
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttg 74  Q
    ||||||| |||||| |||||||||||||||||||| || |||||| |||||||| | ||||||||    
T  27340243 tttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 43234924 - 43234868
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||  |||||||||||||||   ||||||||||||||||    
T  43234924 tgaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 18843787 - 18843716
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    ||||||| ||||||  |||||||||||||||||||||  ||| ||||||||||| | | ||||| |||||||    
T  18843787 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 19042446 - 19042516
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaaca 80  Q
    ||||||| ||||||  ||||||||||| ||||||| || ||||||| |||||||   ||||||||||||||    
T  19042446 tttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 5362020 - 5362092
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| |||||| ||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  5362020 tttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 8011273 - 8011347
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaatta 84  Q
    ||||||| ||||||  |||||||||||||||||||||  |||||||||||| ||   ||||||||||||||||||    
T  8011273 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttgagttgggattttgacaacaatta 8011347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 13551679 - 13551751
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||| ||||||||||||||||| |||||||||| |||| |  |||||||||||||||    
T  13551679 tttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 13551751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  31 aaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 13023624 - 13023567
Alignment:
Q  26 tgaagaaagtcgcaaaatcctaca-ttttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||| | ||||||||||||||   ||||||||||||||||    
T  13023624 tgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaat 13023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 7044799 - 7044728
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    ||||||| ||||||  |||| ||||| |||||||| |  ||||||||||||||| | |||||||||||||||    
T  7044799 tttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgacaacaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 4156819 - 4156763
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||| ||||||  ||||||||| |||||| |||||||| | ||||||||||||||||    
T  4156819 tgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaacaat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8889284 - 8889228
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||| || |||||||||  ||||||||||||||| | ||||||||||| ||||    
T  8889284 tgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaat 8889228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 17466136 - 17466080
Alignment:
Q  25 atgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    ||||||||| ||||||||||||| |||||| ||||||||   | |||||||||||||    
T  17466136 atgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 22687721 - 22687793
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||  |||||||||||||||| ||||  ||||||||||||||| | ||||||||||||||||    
T  22687721 tttgagttgttgaagttgaagaaagtcgcaaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 24725534 - 24725606
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||  |||||||||||| |||||| |  ||||||||||||||| ||||||||||||||||||    
T  24725534 tttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaat 24725606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11326442 - 11326386
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  11326442 tgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 44944922 - 44944978
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  44944922 tgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 7730400 - 7730471
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||| ||  ||||||||||||||||| |||  ||||||||||||||| | ||||||||||||||||    
T  7730400 tttgagttgttaaaggtgaagaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaat 7730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 9685301 - 9685373
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||| ||||||||||||||||| |||||||||| |||| |  |||||||||||||||    
T  9685301 tttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 9685373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 26281366 - 26281438
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||  |||||| |||||||| | | ||||||||||||||    
T  26281366 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 26281438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 27221490 - 27221418
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| |||||| ||||||||||||||||||||||  ||||||| |||||||   ||||||| ||||||||    
T  27221490 tttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaat 27221418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 5715341 - 5715290
Alignment:
Q  31 aaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  5715341 aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 8346590 - 8346660
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaaca 80  Q
    ||||||| ||||||  |||||||||||||||||||||| ||||||  ||||| | | ||||||||||||||    
T  8346590 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 39182310 - 39182260
Alignment:
Q  32 aagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||| ||||||||||||||| | |||||||| |||||||    
T  39182310 aagtcgcaaaatcctagattttaggatttaagtcaggattttgtcaacaat 39182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 8343857 - 8343929
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  ||||||||||||||||||||   ||||||||||||| | |  |||||||||||||||    
T  8343857 tttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaat 8343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 5058585 - 5058530
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    |||||||| ||||||||| ||  ||||||||||||||| | |||||||||||||||    
T  5058585 tgaagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 21846503 - 21846554
Alignment:
Q  31 aaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||||  ||||||| ||||||| | ||||||||||||||||    
T  21846503 aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 24990146 - 24990201
Alignment:
Q  28 aagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaatt 83  Q
    ||||||||| |||||||||| ||||| ||||||||| | | |||||||||||||||    
T  24990146 aagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaatt 24990201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 4247424 - 4247355
Alignment:
Q  14 agttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaatt 83  Q
    ||||||||||  ||||||||||  |||||||||  ||||||||||||||    |||||||||||||||||    
T  4247424 agttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaatt 4247355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 8571299 - 8571250
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttga 75  Q
    |||||||||||||||||||||  |||||| |||||||| | |||||||||    
T  8571299 tgaagaaagtcgcaaaatcctggattttatgatttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8330118 - 8330174
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||||||| |  ||||||| ||||| | | ||||||||||||||||    
T  8330118 tgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaat 8330174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 14055323 - 14055251
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  ||||||||||||||||||| |  |||||||||| ||||   ||||||| ||||||||    
T  14055323 tttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14055251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 14365351 - 14365279
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  ||||||||||||||||||| |  |||||||||| ||||   ||||||| ||||||||    
T  14365351 tttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14365279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 6943517 - 6943589
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  6943517 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 6943589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 7223575 - 7223519
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  7223575 tgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaat 7223519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 30912469 - 30912541
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  30912469 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 30912541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 15528183 - 15528240
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaatt 83  Q
    |||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||    
T  15528183 tgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatt 15528240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 23897883 - 23897830
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaag 63  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  23897883 tttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaag 23897830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26053369 - 26053425
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||    
T  26053369 tgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26073422 - 26073478
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||    
T  26073422 tgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 17543797 - 17543869
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||| ||||||||||||||||  ||||||||||||||| |  |||||||||||||||    
T  17543797 tttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaat 17543869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 2912312 - 2912373
Alignment:
Q  18 gttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaac 79  Q
    |||||| ||| ||||||| ||||||||||| |||||| |||||||| | |||||||||||||    
T  2912312 gttgaagatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 7918454 - 7918510
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||| ||||||||||||||||  ||||||| ||||||| | ||||||||||||||||    
T  7918454 tgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 17250113 - 17250057
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||| ||||||||||  ||||||||||||||| | ||||||| ||||||||    
T  17250113 tgaagaaagttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 5422805 - 5422877
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||| ||||| |||||||| |  ||||||| ||||||| | ||||||||||||||||    
T  5422805 tttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaat 5422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 8545043 - 8545087
Alignment:
Q  31 aaagtcgcaaaatcctacattttaggatttaagactggattttga 75  Q
    ||||||||||||||||| ||||||||||||||  | |||||||||    
T  8545043 aaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 10509096 - 10509148
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaa 78  Q
    ||||||||||| |||| | ||  ||||||||||||||| ||||||||||||||    
T  10509096 tgaagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaa 10509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 17103250 - 17103202
Alignment:
Q  34 gtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||  |||||| |||||||| | ||||||||||||||||    
T  17103250 gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaat 17103202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 27233350 - 27233406
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||| |||||||||  ||||||||||||||| | | | ||||||||||||    
T  27233350 tgaagaaagtcacaaaatcctggattttaggatttaagtcggtagtttgacaacaat 27233406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 28745842 - 28745770
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||    
T  28745842 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaat 28745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 17796449 - 17796377
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||| ||||| ||||||| ||||||||| |||||| |||||||| | | ||||||||||||||    
T  17796449 tttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaat 17796377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 19104889 - 19104817
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||| ||||| ||||||| ||||||||| |||||| |||||||| | | ||||||||||||||    
T  19104889 tttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaat 19104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 29067356 - 29067284
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||  ||||||| ||||||| | ||||||||||||||||    
T  29067356 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 29067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 3449366 - 3449419
Alignment:
Q  28 aagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    |||||||||||||||||||  ||||||||||||||| | |||||||||||||||    
T  3449366 aagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27676412 - 27676356
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||| |||||||||||||||| ||||||| |||||||| | ||||||||||||||||    
T  27676412 tgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgacaacaat 27676356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 24649746 - 24649818
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  ||||| |||||  ||||||||| |||||| |||||||| | ||||||||||||||||    
T  24649746 tttgagtcgttgaaggtgaagcaagtcaaaaaatcctagattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 25870441 - 25870505
Alignment:
Q  18 gttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||| |||||||||||| ||||||| |  ||||||||||||||| |  |||||||||||||||    
T  25870441 gttgaagatgaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaat 25870505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 24620257 - 24620332
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcg---caaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  ||||||||||||   ||||||| || ||||||||||||||| | | ||||||||||||||    
T  24620257 tttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaat 24620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 20756095 - 20756039
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||| ||||||||||||  ||||||  ||||||| | ||||||||||||||||    
T  20756095 tgaagaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 31238034 - 31238106
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||    
T  31238034 tttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaat 31238106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 36429919 - 36429848
Alignment:
Q  11 ttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||| ||||||  |||||||||||||||||||||| ||| |||||||||||   ||||||||||||||||    
T  36429919 ttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaat 36429848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 1404839 - 1404783
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||| |||||||||| ||||||| ||||||| | ||||||||||||||||    
T  1404839 tgaagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaat 1404783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 19491929 - 19491853
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattt--taggatttaagactggattttgacaacaatta 84  Q
    ||||||| ||| || ||||||||||||||||||||||| ||||  ||||||||||  |  |||||||||||||||||    
T  19491929 tttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttataggatttaattcgagattttgacaacaatta 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 23863394 - 23863450
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||||||||||||||||| ||  ||||||| ||||||| | ||||||||||||||||    
T  23863394 tgaagaaagtcgcaaaattctcgattttagaatttaagtcgggattttgacaacaat 23863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 30432491 - 30432419
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||   ||||||||||| ||||||||| ||||||| ||||||  | ||||||||||||||||    
T  30432491 tttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaat 30432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 35566011 - 35566082
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    |||||||  ||||| ||||||||||||||||||||||  |||||  ||||||||   |||||||||||||||    
T  35566011 tttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 1690835 - 1690891
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||| |||||||||| |||||| |||||||| | |  |||||||||||||    
T  1690835 tgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttgacaacaat 1690891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 15588907 - 15588978
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||  ||||||||| |||||||||||  |||||| || ||||| | ||||||||||| ||||    
T  15588907 tttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaat 15588978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 31578061 - 31578001
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaattact 86  Q
    |||||||| |||||||||| || ||||||  ||||||| | |||||||||||||| |||||    
T  31578061 tgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaacagttact 31578001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 158 - 211
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaag 63  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  158 tttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaag 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 29384373 - 29384444
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaa 81  Q
    ||||||| ||||||  |||||||||||||||||||  | ||||||||||||||  |||||||||||||||||    
T  29384373 tttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 477120 - 477176
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||| |||||||||  ||||||||||||||| | ||||||||||||||||    
T  477120 tgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaat 477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 5922105 - 5922049
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||| |||||||||  ||||||||||||||| | ||||||||||||||||    
T  5922105 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 5922049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 11879672 - 11879600
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||| ||||||||||  ||||||||||||||| | | ||||||||||||||    
T  11879672 tttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaat 11879600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 11897088 - 11897016
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||| ||||||||||  ||||||||||||||| | | ||||||||||||||    
T  11897088 tttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaat 11897016  T

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Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 17647065 - 17646993
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||||||||||||||||||||  |||||| |||||||| | | ||||||||||||||    
T  17647065 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 15294742 - 15294672
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaaca 80  Q
    ||||||| ||||||  |||| ||||||||||||||||  ||||||||||||||| | ||||||| ||||||    
T  15294742 tttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 15475111 - 15475041
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaaca 80  Q
    ||||||| ||||||  |||| ||||||||||||||||  ||||||||||||||| | ||||||| ||||||    
T  15475111 tttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 22910259 - 22910312
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaag 63  Q
    ||||||| ||||||  |||||||||||| ||||||||| |||||||||||||||    
T  22910259 tttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaag 22910312  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 24056641 - 24056697
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    |||| ||||||||||||||||  ||||||||||||||| |  |||||||| ||||||    
T  24056641 tgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataacaat 24056697  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 31424235 - 31424167
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaa 78  Q
    ||||||| ||||||   ||||||||||| ||||||||  ||||||| ||||||| | ||||||||||||    
T  31424235 tttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaa 31424167  T

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Target: scaffold0186 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8499 - 8443
Alignment:
Q  26 tgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||||||||||||||| |  |||||||||||||||   ||||||||||||||||    
T  8499 tgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaat 8443  T

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Target: scaffold0603 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 9077 - 9149
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||| ||| || |||||||||||||||||  ||||||  | ||||||||||||||||    
T  9077 tttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaat 9149  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 48845 - 48917
Alignment:
Q  10 tttgagttgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagactggattttgacaacaat 82  Q
    ||||||| ||||||  |||| ||||| ||||||| ||| ||||||||||||||| | | ||||| ||||||||    
T  48845 tttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaat 48917  T

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