View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19425_low_45 (Length: 341)

Name: NF19425_low_45
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19425_low_45
NF19425_low_45
[»] chr7 (23 HSPs)
chr7 (13-87)||(16807138-16807212)
chr7 (13-85)||(36819616-36819688)
chr7 (13-85)||(38069051-38069123)
chr7 (13-85)||(30462213-30462285)
chr7 (13-85)||(35693822-35693894)
chr7 (13-85)||(40231928-40232000)
chr7 (13-87)||(37101018-37101092)
chr7 (15-87)||(25274011-25274083)
chr7 (27-85)||(35265823-35265881)
chr7 (20-82)||(47713431-47713493)
chr7 (13-78)||(40818689-40818754)
chr7 (13-55)||(46242472-46242514)
chr7 (20-85)||(18756599-18756664)
chr7 (13-85)||(9173328-9173400)
chr7 (13-68)||(38850719-38850774)
chr7 (13-55)||(4620097-4620139)
chr7 (13-55)||(28016145-28016187)
chr7 (20-85)||(31496644-31496709)
chr7 (13-85)||(32222550-32222622)
chr7 (13-55)||(5842147-5842189)
chr7 (13-55)||(38441843-38441885)
chr7 (13-85)||(38259484-38259556)
chr7 (13-85)||(42493517-42493589)
[»] chr5 (34 HSPs)
chr5 (13-85)||(20040407-20040479)
chr5 (13-85)||(1098175-1098247)
chr5 (13-85)||(1781137-1781209)
chr5 (13-85)||(13548213-13548285)
chr5 (13-82)||(14057711-14057780)
chr5 (13-85)||(14633007-14633079)
chr5 (13-85)||(19344691-19344763)
chr5 (13-85)||(31191169-31191241)
chr5 (13-85)||(33402583-33402655)
chr5 (13-85)||(40316818-40316890)
chr5 (13-85)||(41410651-41410723)
chr5 (13-85)||(1831351-1831423)
chr5 (13-85)||(20022860-20022932)
chr5 (13-85)||(27675540-27675612)
chr5 (13-79)||(30211733-30211799)
chr5 (13-82)||(14607549-14607618)
chr5 (13-85)||(30721677-30721749)
chr5 (13-85)||(30788205-30788277)
chr5 (13-85)||(41263121-41263193)
chr5 (13-78)||(8627142-8627207)
chr5 (20-78)||(2799638-2799696)
chr5 (13-78)||(34347474-34347539)
chr5 (20-72)||(2805810-2805862)
chr5 (13-85)||(9936880-9936952)
chr5 (13-85)||(10465287-10465359)
chr5 (13-85)||(40079981-40080053)
chr5 (13-88)||(14139932-14140007)
chr5 (13-74)||(41042829-41042890)
chr5 (13-85)||(39925203-39925275)
chr5 (20-87)||(32110671-32110738)
chr5 (22-55)||(967222-967255)
chr5 (13-86)||(20503040-20503113)
chr5 (13-82)||(34169832-34169901)
chr5 (13-85)||(2551619-2551691)
[»] chr4 (30 HSPs)
chr4 (13-85)||(40411600-40411672)
chr4 (13-85)||(8525407-8525479)
chr4 (13-85)||(43447165-43447237)
chr4 (13-89)||(55631866-55631942)
chr4 (13-85)||(3708253-3708325)
chr4 (13-85)||(10384848-10384920)
chr4 (13-85)||(31152661-31152733)
chr4 (13-85)||(37667765-37667837)
chr4 (13-85)||(46608213-46608285)
chr4 (13-85)||(48380473-48380545)
chr4 (13-80)||(39170963-39171030)
chr4 (13-88)||(39332821-39332896)
chr4 (13-87)||(43047385-43047459)
chr4 (13-85)||(31657347-31657419)
chr4 (13-79)||(1613209-1613275)
chr4 (13-83)||(48336419-48336489)
chr4 (20-85)||(6520435-6520500)
chr4 (13-85)||(1377503-1377575)
chr4 (13-85)||(23605893-23605965)
chr4 (13-85)||(28914368-28914440)
chr4 (13-85)||(29821050-29821122)
chr4 (14-85)||(28899063-28899134)
chr4 (13-85)||(33394077-33394149)
chr4 (13-85)||(42185274-42185346)
chr4 (14-85)||(24334373-24334444)
chr4 (20-85)||(39376870-39376935)
chr4 (13-80)||(47834135-47834202)
chr4 (35-85)||(44210149-44210199)
chr4 (13-51)||(50684954-50684992)
chr4 (20-69)||(37164032-37164081)
[»] scaffold0221 (1 HSPs)
scaffold0221 (13-85)||(5376-5448)
[»] chr6 (27 HSPs)
chr6 (13-85)||(24798542-24798614)
chr6 (13-86)||(17496314-17496387)
chr6 (13-85)||(2397770-2397842)
chr6 (13-85)||(6142503-6142575)
chr6 (13-83)||(29515022-29515092)
chr6 (20-85)||(2667328-2667393)
chr6 (13-85)||(2141568-2141640)
chr6 (13-85)||(32541473-32541545)
chr6 (20-85)||(2656673-2656738)
chr6 (13-85)||(6188652-6188724)
chr6 (13-85)||(9022840-9022912)
chr6 (13-85)||(24825165-24825237)
chr6 (13-93)||(24949527-24949607)
chr6 (13-85)||(29795451-29795523)
chr6 (13-85)||(30699261-30699333)
chr6 (13-85)||(28483037-28483110)
chr6 (20-90)||(995558-995628)
chr6 (20-85)||(16661605-16661670)
chr6 (13-85)||(16969377-16969450)
chr6 (13-68)||(13358526-13358581)
chr6 (20-85)||(31708893-31708958)
chr6 (13-78)||(32673755-32673820)
chr6 (13-85)||(4890122-4890194)
chr6 (13-85)||(35117280-35117352)
chr6 (20-51)||(10109414-10109445)
chr6 (13-85)||(31948637-31948709)
chr6 (13-57)||(34500901-34500945)
[»] chr3 (42 HSPs)
chr3 (13-85)||(901075-901147)
chr3 (13-85)||(9484596-9484668)
chr3 (13-89)||(16434844-16434920)
chr3 (13-85)||(29455695-29455767)
chr3 (13-85)||(29793365-29793437)
chr3 (13-85)||(42098614-42098686)
chr3 (13-85)||(49076413-49076485)
chr3 (13-86)||(12948039-12948112)
chr3 (13-85)||(29720395-29720467)
chr3 (13-85)||(34263691-34263763)
chr3 (13-80)||(34669613-34669680)
chr3 (13-85)||(34555151-34555223)
chr3 (13-85)||(48927789-48927861)
chr3 (13-85)||(50673677-50673749)
chr3 (13-85)||(53274982-53275054)
chr3 (13-85)||(18013457-18013529)
chr3 (21-85)||(46866343-46866407)
chr3 (13-80)||(38878465-38878532)
chr3 (13-85)||(36179123-36179195)
chr3 (13-85)||(38833952-38834024)
chr3 (24-83)||(14751040-14751099)
chr3 (13-85)||(2643256-2643328)
chr3 (13-85)||(4229175-4229247)
chr3 (22-85)||(44781979-44782042)
chr3 (13-85)||(1778361-1778433)
chr3 (13-85)||(29809345-29809417)
chr3 (13-63)||(43370313-43370363)
chr3 (13-85)||(36364750-36364820)
chr3 (13-85)||(4464881-4464953)
chr3 (13-85)||(4945838-4945910)
chr3 (13-85)||(28958986-28959058)
chr3 (13-84)||(26759480-26759551)
chr3 (13-84)||(53055612-53055683)
chr3 (13-55)||(36594406-36594448)
chr3 (13-85)||(32961246-32961318)
chr3 (13-68)||(3804457-3804512)
chr3 (13-68)||(47340071-47340126)
chr3 (13-55)||(1325534-1325576)
chr3 (13-82)||(1334282-1334351)
chr3 (20-85)||(47069406-47069471)
chr3 (13-54)||(49818788-49818829)
chr3 (13-85)||(52094081-52094153)
[»] chr1 (35 HSPs)
chr1 (13-85)||(45299318-45299390)
chr1 (13-85)||(8251145-8251217)
chr1 (13-85)||(10100509-10100581)
chr1 (13-89)||(41855717-41855793)
chr1 (13-85)||(10124109-10124181)
chr1 (13-85)||(52749281-52749353)
chr1 (13-85)||(6017445-6017517)
chr1 (13-89)||(44240515-44240591)
chr1 (13-88)||(5606387-5606462)
chr1 (13-87)||(7075326-7075400)
chr1 (13-79)||(26543874-26543940)
chr1 (13-85)||(1821624-1821696)
chr1 (13-85)||(12685894-12685966)
chr1 (13-85)||(5945765-5945837)
chr1 (13-85)||(8048744-8048816)
chr1 (13-85)||(28490160-28490232)
chr1 (13-85)||(29253479-29253551)
chr1 (13-85)||(31932174-31932246)
chr1 (13-85)||(41414203-41414275)
chr1 (13-85)||(50014557-50014629)
chr1 (13-68)||(36035703-36035758)
chr1 (13-68)||(48389083-48389138)
chr1 (13-83)||(44452197-44452267)
chr1 (13-76)||(31651897-31651960)
chr1 (13-71)||(10648197-10648255)
chr1 (13-51)||(40883445-40883483)
chr1 (13-85)||(2126652-2126724)
chr1 (13-85)||(48312029-48312100)
chr1 (13-72)||(38786942-38787001)
chr1 (13-68)||(44741360-44741415)
chr1 (20-55)||(52688559-52688594)
chr1 (13-51)||(49903681-49903719)
chr1 (13-85)||(3138605-3138676)
chr1 (13-85)||(22328150-22328222)
chr1 (13-85)||(43453161-43453233)
[»] chr2 (30 HSPs)
chr2 (13-83)||(7724602-7724672)
chr2 (13-85)||(12208989-12209061)
chr2 (13-84)||(16127771-16127842)
chr2 (13-85)||(8373434-8373506)
chr2 (13-85)||(38963795-38963867)
chr2 (13-85)||(40471736-40471808)
chr2 (13-85)||(41575562-41575634)
chr2 (20-83)||(31603414-31603477)
chr2 (13-85)||(5096248-5096320)
chr2 (13-85)||(10333569-10333641)
chr2 (13-85)||(16126073-16126145)
chr2 (13-85)||(16333480-16333552)
chr2 (13-85)||(41436832-41436904)
chr2 (13-74)||(11277562-11277623)
chr2 (13-88)||(4137407-4137481)
chr2 (13-85)||(8896271-8896343)
chr2 (13-85)||(22718534-22718606)
chr2 (13-68)||(37987927-37987982)
chr2 (13-85)||(18504472-18504544)
chr2 (13-85)||(6730094-6730166)
chr2 (14-85)||(37316876-37316947)
chr2 (13-86)||(2831706-2831779)
chr2 (13-78)||(15177376-15177441)
chr2 (20-85)||(20682654-20682719)
chr2 (13-85)||(25766444-25766516)
chr2 (20-56)||(44022297-44022333)
chr2 (30-85)||(25762194-25762249)
chr2 (13-90)||(6075120-6075197)
chr2 (13-82)||(16646249-16646318)
chr2 (25-85)||(45036363-45036423)
[»] chr8 (32 HSPs)
chr8 (13-85)||(30464432-30464504)
chr8 (13-88)||(4327108-4327183)
chr8 (13-85)||(38842162-38842235)
chr8 (13-85)||(23437802-23437874)
chr8 (13-85)||(761550-761622)
chr8 (13-85)||(25691586-25691658)
chr8 (13-85)||(28583292-28583364)
chr8 (20-85)||(14378682-14378747)
chr8 (13-85)||(15870175-15870247)
chr8 (13-85)||(23547068-23547140)
chr8 (13-85)||(25009144-25009216)
chr8 (13-85)||(37094132-37094204)
chr8 (13-85)||(44887704-44887776)
chr8 (19-85)||(3466283-3466349)
chr8 (13-85)||(4960151-4960223)
chr8 (13-85)||(8496875-8496947)
chr8 (13-85)||(40645609-40645681)
chr8 (13-85)||(43184768-43184840)
chr8 (13-88)||(44717293-44717368)
chr8 (13-85)||(11756776-11756848)
chr8 (13-85)||(20671256-20671328)
chr8 (13-85)||(14584196-14584268)
chr8 (13-85)||(30653360-30653432)
chr8 (13-68)||(17523822-17523877)
chr8 (13-55)||(21132917-21132959)
chr8 (13-85)||(5777543-5777615)
chr8 (13-85)||(44947018-44947089)
chr8 (14-85)||(44361921-44361992)
chr8 (13-87)||(12893717-12893791)
chr8 (13-85)||(7475374-7475446)
chr8 (13-85)||(29616315-29616387)
chr8 (13-77)||(44039833-44039897)
[»] scaffold0001 (1 HSPs)
scaffold0001 (13-85)||(183966-184038)
[»] scaffold0281 (1 HSPs)
scaffold0281 (13-85)||(13104-13176)
[»] scaffold0204 (1 HSPs)
scaffold0204 (13-83)||(23941-24011)
[»] scaffold0500 (1 HSPs)
scaffold0500 (13-85)||(667-739)
[»] scaffold1248 (1 HSPs)
scaffold1248 (13-85)||(1448-1520)
[»] scaffold0952 (1 HSPs)
scaffold0952 (13-85)||(793-865)
[»] scaffold0283 (1 HSPs)
scaffold0283 (13-85)||(2996-3067)
[»] scaffold0289 (1 HSPs)
scaffold0289 (22-55)||(9165-9198)
[»] scaffold0069 (1 HSPs)
scaffold0069 (20-85)||(4441-4506)


Alignment Details
Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 16807138 - 16807212
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16807138 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 16807212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 36819688 - 36819616
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36819688 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagta 36819616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 38069123 - 38069051
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  38069123 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagta 38069051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 30462213 - 30462285
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  30462213 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 30462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 35693822 - 35693894
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  35693822 aatatggtcgaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgcgacggagggagta 35693894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 40232000 - 40231928
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40232000 aatatggtcaaaataaattaggtcaaaattgcacattttcaaacaggttatttattacgggacggagggagta 40231928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 37101018 - 37101092
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 87  Q
    |||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||    
T  37101018 aatatggtcaaagtaagttaggtcaaaattacacattttcaaataggtcatctattgcgggacggagggagtagt 37101092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 25274011 - 25274083
Alignment:
Q  15 tatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 87  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||    
T  25274011 tatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggatggagtagt 25274083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 35265823 - 35265881
Alignment:
Q  27 aagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  35265823 aagttaggtcaaaattgtacatttttaaacaagtcatttattacgggacggagggagta 35265881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 47713431 - 47713493
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 82  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||| ||||| ||||||    
T  47713431 tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattatgggacagaggga 47713493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40818689 - 40818754
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacgga 78  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| || |||| ||||||||||||||    
T  40818689 aatatggtcagagtaagttagatcaaaattgcacattttcaaatagatcatctattacgggacgga 40818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 46242472 - 46242514
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  46242472 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 46242514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 18756664 - 18756599
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||| ||||||||||||||| |||||||||  |||||| |||||||| ||||| ||||||    
T  18756664 tcaaagtaagataggtcaaaattgcatattttcaaatgggtcatctattacggaacggatggagta 18756599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 9173328 - 9173400
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||  |||||| |||| ||| ||||||||||||    
T  9173328 aatatggtcaaagtaagttaggtcaaaattacacgtttttaaattggtcatctattccggaacggagggagta 9173400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 38850774 - 38850719
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||| ||||||||||||||||||||||| ||||||||||||  |||||| ||||    
T  38850774 aatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggtcatctatt 38850719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 4620139 - 4620097
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  4620139 aatatggtcaaagtaagttaggtcaaaattacacattttcaaa 4620097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 28016187 - 28016145
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  28016187 aatatggtcaaagtaagttagatcaaaattgcacattttcaaa 28016145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 31496644 - 31496709
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||| |||||||||||    | || ||||||| |||||||||||||    
T  31496644 tcaaagtaagttaggtcaaaattgtacattttcaaatgaattatctattacgagacggagggagta 31496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 32222622 - 32222550
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||| ||| ||||||| |||| ||||||||||||||||| | |  |||||| |||||||| ||||||||||||    
T  32222622 aatacgattaaagtaaattagatcaaaattgcacattttgagatgggtcatctattacggaacggagggagta 32222550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 5842189 - 5842147
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||| |||| | |||||||||||||||||||    
T  5842189 aatatgatcaaagtaaattagattaaaattgcacattttcaaa 5842147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38441885 - 38441843
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||||||||||| |||||| ||||||||||||    
T  38441885 aatatggtcaaagtaagttaggtaaaaattacacattttcaaa 38441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 38259556 - 38259484
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||| |||| || |||||||| ||||||||  || |||| |||| |||||  |||||||||    
T  38259556 aatatgatcaaagtaaattagatcgaaattgcaaattttcaactagatcatctattgcgggatagagggagta 38259484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 42493589 - 42493517
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||| ||||||||||    ||||||| ||||| ||||||| ||||  |||||||||||||||    
T  42493589 aatatggtcaaagtatgttaggtcaatcgcgcacattgtcaaataggtcatctattgtgggacggagggagta 42493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 20040407 - 20040479
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20040407 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 20040479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 1098247 - 1098175
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1098247 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 1098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 1781137 - 1781209
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1781137 aatatggtcaaagtaacttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 1781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 13548285 - 13548213
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  13548285 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacggagggagta 13548213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14057780 - 14057711
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 82  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  14057780 aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacagatcatttattgcgggacggaggga 14057711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 14633079 - 14633007
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  14633079 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggagggagta 14633007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 19344691 - 19344763
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  19344691 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaaggagta 19344763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 31191169 - 31191241
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  31191169 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 31191241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 33402583 - 33402655
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  33402583 aatatgatcaaagtaagttaggtcaaaattacacatttttaaacagatcatctattacgggacggagggagta 33402655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 40316890 - 40316818
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40316890 aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 40316818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 41410651 - 41410723
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41410651 aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 41410723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 1831423 - 1831351
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| || |||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1831423 aatatggtcgaagtaaattatgtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 1831351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 20022932 - 20022860
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||    
T  20022932 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgagaaggaggaagta 20022860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 27675612 - 27675540
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  27675612 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcgggacggagggagta 27675540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 30211733 - 30211799
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggag 79  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  30211733 aatatggtcaaagtaagttagatcaaaattgcacatttttaaacaggtcatttattgcgggacggag 30211799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 14607549 - 14607618
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 82  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  14607549 aatatggtcaaattaaattaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggaggga 14607618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 30721677 - 30721749
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||||||||    
T  30721677 aatatggtcaaaataagttaggtcaaaattgcacattttcaaatatgtcatttattgcgggatggagggagta 30721749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 30788277 - 30788205
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||  |||||| |||||||||||||||||||||    
T  30788277 aatatggtcaaagtaagttatgtcaaaattacacattttcaaatgggtcatatattacgggacggagggagta 30788205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 41263121 - 41263193
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||    
T  41263121 aatatggtcaaagtaagttaggtcaaaattgcacatttttaaacatatcatttattgagggacggagggagta 41263193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 8627207 - 8627142
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacgga 78  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||||||    
T  8627207 aatatggtcaaagtaagttagatcaaaattgcacattttcaaataggtcatctattgcgggacgga 8627142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 2799696 - 2799638
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacgga 78  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||    
T  2799696 tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattacggaacgga 2799638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 34347539 - 34347474
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacgga 78  Q
    |||||| ||||||||||||| ||||||||| |||||||||||| ||||||| |||| ||| |||||    
T  34347539 aatatggtcaaagtaagttatgtcaaaattacacattttcaaataggtcatctattgcggaacgga 34347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 2805862 - 2805810
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgg 72  Q
    ||||||||| ||||||||||||||||||||||||||  |||||| ||||||||    
T  2805862 tcaaagtaaattaggtcaaaattgcacattttcaaatgggtcatctattacgg 2805810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 9936880 - 9936952
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||| |||| ||||||||||||||||| ||| |  ||||||||| ||||||||||||||||    
T  9936880 aatatggtcaaaataaattagatcaaaattgcacatttttaaatatatcatttattgcgggacggagggagta 9936952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 10465287 - 10465359
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||  | ||||||||| ||||||| |||| ||||| ||||||||||    
T  10465287 aatatggtcaaagtaagataggtcaaaattataaattttcaaataggtcatctattgcgggagggagggagta 10465359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 40080053 - 40079981
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||| ||||||| | ||||||||| ||||||| ||||   ||||||||||||||    
T  40080053 aatatggtcaaagtaagttaggttaaaattgtaaattttcaaataggtcatctattgtaggacggagggagta 40079981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 14140007 - 14139932
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagta 88  Q
    ||||||||||||||||  ||| ||||||||||| ||||||||  || |||| |||| |||||| ||||||||||||    
T  14140007 aatatgatcaaagtaaactagatcaaaattgcaaattttcaattagatcatctattgcgggacagagggagtagta 14139932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 41042829 - 41042890
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacggga 74  Q
    |||||| |||||||||| ||| ||||||||||| ||||||||| |||| ||||||| |||||    
T  41042829 aatatggtcaaagtaagctagatcaaaattgcaaattttcaaataggttatttattgcggga 41042890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 39925275 - 39925203
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| || |||||||||| || |||||||||  | |||| |||| ||||||||||||||||    
T  39925275 aatatggtcaaagtaaatttggtcaaaattacaaattttcaaatggatcatctattgcgggacggagggagta 39925203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 32110671 - 32110738
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 87  Q
    ||||||||| |||| |||||||||||||||||||||  | | || |||| ||| ||||||||||||||    
T  32110671 tcaaagtaaattagatcaaaattgcacattttcaaatggattatctattgcggaacggagggagtagt 32110738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 967255 - 967222
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||| |||||||||    
T  967255 aaagtaagttaggtcaaaattgcaaattttcaaa 967222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 20503040 - 20503113
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtag 86  Q
    |||||| || |||||||||||||||||||| |||||||| |||  |  |||  ||| |||||||||||||||||    
T  20503040 aatatggtctaagtaagttaggtcaaaattacacatttttaaatggaccatcaatttcgggacggagggagtag 20503113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 34169901 - 34169832
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 82  Q
    |||||| |||||||||  ||| ||||||||||| ||||||||| || |||| |||| ||||||| |||||    
T  34169901 aatatggtcaaagtaaactagatcaaaattgcaaattttcaaatagatcatctattgcgggacgaaggga 34169832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 2551619 - 2551691
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| | ||| |||||||||||||||||||||||||| |||  |||||| |||| | |||| |||| ||||    
T  2551619 aatatggttaaaataagttaggtcaaaattgcacatttttaaatgggtcatctatttcaggactgaggaagta 2551691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 40411600 - 40411672
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40411600 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 40411672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 8525407 - 8525479
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  8525407 aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgggacggagggagta 8525479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 43447237 - 43447165
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43447237 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattacgggacggagggagta 43447165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 55631866 - 55631942
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagtat 89  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  55631866 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtagtat 55631942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 3708325 - 3708253
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  3708325 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgtgggacggagggagta 3708253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 10384920 - 10384848
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10384920 aatatggttaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 10384848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 31152733 - 31152661
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31152733 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagggagta 31152661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 37667765 - 37667837
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37667765 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 37667837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 46608285 - 46608213
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  46608285 aatatggtcaaagtaagttaggtcaaaatttcacattttcaaacaggtcatttattgcgggacggaggaagta 46608213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 48380545 - 48380473
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  48380545 aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagggagta 48380473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 39171030 - 39170963
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 80  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39171030 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 39170963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 39332821 - 39332896
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagta 88  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  39332821 aatatggtcaaagtaagttagttcaaaattgcacattttcaaacagatcatttattgcgtgacggagggagtagta 39332896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 43047459 - 43047385
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 87  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  43047459 aatatggtcaaagtaagttaggttaaaattgcacattttcaaacaagtcatttattgcgggatggaggaagtagt 43047385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 31657347 - 31657419
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  31657347 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagggagta 31657419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 1613209 - 1613275
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggag 79  Q
    |||||| ||||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  1613209 aatatggtcaaagtaaattaggtcaaaattacacattttcaaataggtcatctattacgggacggag 1613275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 48336419 - 48336489
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||   ||||| |||| ||||||||||||||    
T  48336419 aatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggagggag 48336489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 6520500 - 6520435
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||    
T  6520500 tcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggatggagta 6520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 1377575 - 1377503
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| ||||| |||||| ||||||  ||||||||    
T  1377575 aatatggtcaaagtaagataggtcaaaattgcaaattttcaaataggtcgtttattgcgggacaaagggagta 1377503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 23605893 - 23605965
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| || ||||||||| ||||| |||| |||||    
T  23605893 aatatgatcaaagtaagctaggtcaaaattgtaaattttcaaatagatcatttattgcgggatggagagagta 23605965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 28914440 - 28914368
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||| | ||||| |||||| | ||||||| ||| ||||||||||||    
T  28914440 aatatggtcaaagtaagttaggtcaaaattgtaaattttgaaacagtttatttattgcggaacggagggagta 28914368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 29821122 - 29821050
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||| |||||||||||||||||||||  | |||| |||||||||||| | ||||||    
T  29821122 aatatggtcaaagtaagttagatcaaaattgcacattttcaaatggatcatctattacgggacgaaaggagta 29821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 28899063 - 28899134
Alignment:
Q  14 atatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| |||||||||  ||||||||||||||| ||||||||| ||||||| |||| |||||| |||||||||    
T  28899063 atatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacagagggagta 28899134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 33394149 - 33394077
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||| |||  |||||  ||||  |||||||||| ||||    
T  33394149 aatatggtcaaagtaagttaggtcaaaattgcacatttttaaatgggtcacctattgtgggacggaggaagta 33394077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 42185346 - 42185274
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||| |||||||||||||||| |||||||||  | |||| |||| ||||||||||||||||    
T  42185346 aatatggtcaaactaaattaggtcaaaattgcaaattttcaaatggatcatctattgcgggacggagggagta 42185274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 24334373 - 24334444
Alignment:
Q  14 atatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| |||||||||  ||||||||||||||| ||||||||| ||||||| |||| ||||||  ||||||||    
T  24334373 atatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacaaagggagta 24334444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 39376870 - 39376935
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||  ||||||||||||||| ||||||||  | ||||| |||| ||||||||||||||||    
T  39376870 tcaaagtaaactaggtcaaaattgcaaattttcaactaagtcatctattgcgggacggagggagta 39376935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 47834135 - 47834202
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 80  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||   |||||  ||| |||||||||||    
T  47834135 aatatggtcaaagtaagttatgtcaaaattacacattttcaaatgtgtcatccattccgggacggagg 47834202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 44210199 - 44210149
Alignment:
Q  35 tcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||| | ||| ||| |||||||||||| ||||||||||||||||    
T  44210199 tcaaaattgcaaaattttaaataggtcatttattgcgggacggagggagta 44210149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 50684992 - 50684954
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacatttt 51  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  50684992 aatatgatcaaagtaagttagatcaaaattgcatatttt 50684954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37164081 - 37164032
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatta 69  Q
    |||||||||||||||||||||||| | |||||||||  |||||| |||||    
T  37164081 tcaaagtaagttaggtcaaaattgtatattttcaaatgggtcatctatta 37164032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 5448 - 5376
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5448 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 5376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 24798542 - 24798614
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24798542 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 24798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 17496314 - 17496387
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtag 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  17496314 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagtag 17496387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 2397842 - 2397770
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2397842 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 2397770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 6142503 - 6142575
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  6142503 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacggatggagta 6142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 29515022 - 29515092
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  29515022 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggttacttattaagggacggagggag 29515092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 2667328 - 2667393
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2667328 tcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 2667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 2141640 - 2141568
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||    
T  2141640 aatatgatcaaagtaagttaggtcaaaattgtacattttcaaacaggtcacttattaagggacggacggagta 2141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 32541473 - 32541545
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  32541473 aatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgggacggagggagta 32541545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 2656673 - 2656738
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  2656673 tcaaagtaagttaggtcaaaattgcacattttcaaacagctcatttattgcgggacggatggagta 2656738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 6188652 - 6188724
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||||||    
T  6188652 aatatgctcaaagtaagttaggtcaaaattgcacattttcaaacatgtcacttattaagggacggatggagta 6188724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 9022912 - 9022840
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||    
T  9022912 aatatggtcaaagtatgttaggtcaaaattgcatattttcaaacaggtcatttattgcaggacggagggagta 9022840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 24825237 - 24825165
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||||    
T  24825237 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcacttattaaaggacggagggagta 24825165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 24949607 - 24949527
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagtatcttt 93  Q
    |||| |||||||||||||||| |||||||||||||||||||||  |||||| |||| |||||||||||||||| |||||||    
T  24949607 aatacgatcaaagtaagttagatcaaaattgcacattttcaaatgggtcatctattgcgggacggagggagtaatatcttt 24949527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 29795523 - 29795451
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| | |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  29795523 aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 29795451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 30699333 - 30699261
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||| ||| ||||||||||||    
T  30699333 aatatggtcaaagtaagttaggtcaaaattacacatttttaaacagatcatttattgcggaacggagggagta 30699261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 28483110 - 28483037
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggac-ggagggagta 85  Q
    |||||| | |||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  28483110 aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacgggagggagta 28483037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 995628 - 995558
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagtatc 90  Q
    ||||||||| || |||||||||| |||||||||||||| |||||||||| | |||||||||||||| ||||    
T  995628 tcaaagtaaatttggtcaaaattacacattttcaaacatgtcatttattgcaggacggagggagtaatatc 995558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 16661605 - 16661670
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||||||||| ||||||||||||  | |||| |||| |||||| |||||||||    
T  16661605 tcaaagtaagttaggtcaaaattacacattttcaaatggatcatctattgcgggactgagggagta 16661670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 16969450 - 16969377
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaaca-ggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| ||| |||||||||||||||||||||| | ||||| |||||| ||||||||| |||||    
T  16969450 aatatggtcaaagtaaattaagtcaaaattgcacattttcaaatagggtcacttattaagggacggagagagta 16969377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 13358581 - 13358526
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||| ||||||||||||||||||||||| |||||||||||| | ||||| ||||    
T  13358581 aatatggtcaaagtaagttaggtcaaaattacacattttcaaataagtcatctatt 13358526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 31708958 - 31708893
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||| ||| |||||||||||||||||| ||| || |||| |||| | ||||||||||||||    
T  31708958 tcaaagtaaattaagtcaaaattgcacatttttaaatagatcatctattgcaggacggagggagta 31708893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 32673820 - 32673755
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacgga 78  Q
    |||||| ||||| |||||||| ||||||||||| ||||| ||| || |||| ||||||||||||||    
T  32673820 aatatggtcaaaataagttagatcaaaattgcaaatttttaaatagatcatctattacgggacgga 32673755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 4890122 - 4890194
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| |||||||||||||||||||||| |||  | |||| |||| |  |||||||||||||    
T  4890122 aatatggtcaaagtaaattaggtcaaaattgcacatttttaaatggatcatctattgcatgacggagggagta 4890194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 35117352 - 35117280
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||| || |||||||||||||||||||  |||  |||||| ||| || |||||||||    
T  35117352 aatatggtcaaagtaagttatgttaaaattgcacattttcaaatgggttctttattgcggaacagagggagta 35117280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 10109414 - 10109445
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacatttt 51  Q
    ||||||||||||||||||||||||||||||||    
T  10109414 tcaaagtaagttaggtcaaaattgcacatttt 10109445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 31948637 - 31948709
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||||||| |||| |||| ||||||||||||  | |||| |||| || |||||||||||||    
T  31948637 aatatggtcaaaataagttaagtcataattacacattttcaaatggatcatctattgcgagacggagggagta 31948709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34500945 - 34500901
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaaca 57  Q
    ||||||||||||||| || ||||||||| |||||||| |||||||    
T  34500945 aatatgatcaaagtatgtcaggtcaaaagtgcacattgtcaaaca 34500901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 901075 - 901147
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  901075 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 9484668 - 9484596
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9484668 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 9484596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 16434844 - 16434920
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagtat 89  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16434844 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtagtat 16434920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 29455695 - 29455767
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29455695 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacaggacggagggagta 29455767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 29793365 - 29793437
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29793365 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 29793437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 42098614 - 42098686
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42098614 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 42098686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 49076413 - 49076485
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49076413 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 49076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 12948112 - 12948039
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtag 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  12948112 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagtag 12948039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 29720467 - 29720395
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  29720467 aataggatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 29720395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 34263691 - 34263763
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  34263691 aatatggtcaaagtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgggacggagggagta 34263763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 34669680 - 34669613
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  34669680 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 34669613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 34555223 - 34555151
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  34555223 aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagggagta 34555151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 48927789 - 48927861
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  48927789 aatatggtcaaagtaagttaggtaaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 48927861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 50673749 - 50673677
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  50673749 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagta 50673677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 53274982 - 53275054
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  53274982 aatatgatcaaaataagttaggtcaaaattgcacattttcaaataggtcatttattgcgggacggaaggagta 53275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 18013457 - 18013529
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||| ||| ||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  18013457 aatatgatcaaagtaaattatgtcaaaattgcacattttcaaatgggtcatctattacgggacggagggagta 18013529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 46866407 - 46866343
Alignment:
Q  21 caaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  46866407 caaaataagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 46866343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 38878465 - 38878532
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 80  Q
    |||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38878465 aatatggtcaaaataatttatgtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 38878532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 36179123 - 36179195
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||  ||||||||| |||||    
T  36179123 aatatgatcaaagtaaattaagtcaaaattgcacattttcaaacaggttatttattgtgggacggagagagta 36179195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 38833952 - 38834024
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| |||| ||||    
T  38833952 aatatggtcaaagtaagttaggtcaaaattacacatttttaaacaggtcatttattgcgggacagaggaagta 38834024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 14751040 - 14751099
Alignment:
Q  24 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 83  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  14751040 agtaagttaggtcaaaattgcacattttcaaacaggtcatctattgcgggagggagggag 14751099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 2643256 - 2643328
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||  ||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  2643256 aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagta 2643328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 4229175 - 4229247
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| | |||||||||| | ||| ||||||||||    
T  4229175 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcaggatggagggagta 4229247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 44781979 - 44782042
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||| ||||||||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  44781979 aaagtaagttagttcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagta 44782042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 1778433 - 1778361
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| || |||||||||||| ||||||||| ||||||| |||| ||||||||||| ||||    
T  1778433 aatatggtcaaagtaagctaagtcaaaattgcaaattttcaaataggtcatctattgcgggacggaggaagta 1778361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 29809417 - 29809345
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| || ||||||| ||| ||||||||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  29809417 aatatggtcgaagtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagta 29809345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 43370363 - 43370313
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcat 63  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  43370363 aatacgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcat 43370313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 36364750 - 36364820
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||||||||||||||||||  |||||||||| |||| ||||||| ||||||| ||||||||    
T  36364750 aatatggtcaaaataagttaggtcaaaattg--cattttcaaataggttatttattgcgggacgaagggagta 36364820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 4464953 - 4464881
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||  ||||| || |||||| ||||||||| || |||| |||| ||||||||||||||||    
T  4464953 aatatgatcaaagtaaactaggttaacattgcaaattttcaaatagatcatctattgcgggacggagggagta 4464881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 4945838 - 4945910
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||| ||| ||||| | ||||| |||   |||||||||||||||    
T  4945838 aatatggtcaaagtaagttaggtcaaaattgcaaattctcaaatacgtcatctatggtgggacggagggagta 4945910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 28958986 - 28959058
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||| || |||| |||| || |||||||||||||    
T  28958986 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagatcatctattgcgagacggagggagta 28959058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 26759551 - 26759480
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagt 84  Q
    |||||| ||||||||||||||||||||||| || ||||| ||| || |||||||||| | || |||||||||    
T  26759551 aatatggtcaaagtaagttaggtcaaaattacaaatttttaaatagatcatttattatgagatggagggagt 26759480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 53055612 - 53055683
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagt 84  Q
    |||||| ||||| | ||||||||||||||| ||||||||||||  |||||||||||   |||||||||||||    
T  53055612 aatatggtcaaaattagttaggtcaaaattacacattttcaaattggtcatttattgtaggacggagggagt 53055683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 36594406 - 36594448
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  36594406 aatatgatcaaaataagttaggtcaaaattacacattttcaaa 36594448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 32961318 - 32961246
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| |||||||||||||||||||| ||||| |||  |||||| |||| ||||||| | ||||||    
T  32961318 aatatggtcaaactaagttaggtcaaaattgcaaatttttaaatgggtcatctattgcgggacgaaaggagta 32961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 3804512 - 3804457
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||||||||||||| |||| ||||||||| |||||||||||  |||||| ||||    
T  3804512 aatatgatcaaagtaaattagatcaaaattgtacattttcaaatgggtcatgtatt 3804457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 47340071 - 47340126
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||||||||||||| |||| |||||||||||||| ||||||  |||||| ||||    
T  47340071 aatatgatcaaagtaaattagatcaaaattgcacatcttcaaatgggtcatatatt 47340126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 1325534 - 1325576
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||    
T  1325534 aatataatcaaagtaagttaggttaaaattgcaaattttcaaa 1325576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1334282 - 1334351
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 82  Q
    |||||| | ||| |||||||| |||||||| ||||||||||||  |||||| |||| ||| |||||||||    
T  1334282 aatatggtaaaattaagttagatcaaaattacacattttcaaatgggtcatctattgcggaacggaggga 1334351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 47069471 - 47069406
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||| ||||||||||||||| | |||||||||   ||||| ||||  |||||||||||||||    
T  47069471 tcaaagtaggttaggtcaaaattgaaaattttcaaatgtgtcatctattgtgggacggagggagta 47069406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 49818829 - 49818788
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaa 54  Q
    |||||| ||||||||| |||||||||||||||| ||||||||    
T  49818829 aatatggtcaaagtaaattaggtcaaaattgcaaattttcaa 49818788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 52094081 - 52094153
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| |||||||| ||||||||||| |||||||||   ||||| |||| ||| ||||||| ||||    
T  52094081 aatatggtcaaattaagttagatcaaaattgcaaattttcaaatgagtcatctattgcggaacggaggaagta 52094153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 45299390 - 45299318
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45299390 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 45299318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 8251145 - 8251217
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8251145 aatatggtcaaagtaagttagatcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 8251217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 10100509 - 10100581
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  10100509 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 10100581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 41855717 - 41855793
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagtat 89  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  41855717 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattacgggacggagggagtagtat 41855793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 10124181 - 10124109
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  10124181 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggatggatggagta 10124109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 52749353 - 52749281
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52749353 aatatggtcaaaataagttaggtaaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 52749281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 6017445 - 6017517
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  6017445 aatatggtcaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggaggaagta 6017517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 44240591 - 44240515
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagtat 89  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||||||||    
T  44240591 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagggagtagtat 44240515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 5606387 - 5606462
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagta 88  Q
    |||||| | |||||||||||| |||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  5606387 aatatggttaaagtaagttagatcaaaattgcactttttcaaataggtcatttattgcgggacggagggagtagta 5606462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 7075326 - 7075400
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 87  Q
    |||||| |||||||||||||| |||||||||||| |||||||||| |||||||||| ||||| ||||||||||||    
T  7075326 aatatggtcaaagtaagttagatcaaaattgcacgttttcaaacaagtcatttattgcgggatggagggagtagt 7075400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 26543940 - 26543874
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggag 79  Q
    |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  26543940 aatatggtcaaagtaagttaggtcaaaattgtacattttcaaacagatcatttattgcgggacggag 26543874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 1821624 - 1821696
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| ||| |||| | ||||||||||||||    
T  1821624 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaataggccatctattgccggacggagggagta 1821696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 12685894 - 12685966
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||| ||| |||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||    
T  12685894 aatatgatcaaaataaattagatcaaaattgcacattttcaaacgggtcatctattacgggacgaagggagta 12685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 5945837 - 5945765
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| | ||| ||| ||| |||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  5945837 aatatggttaaaataaattatgtcaaaattgcacattttcaaacatgtcatttattgcgggacggagagagta 5945765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 8048744 - 8048816
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| |||| ||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||||    
T  8048744 aatatggtcaaaataagctaggtcaaaattgcaaattttcaaataggtcatctattgcaggacggagggagta 8048816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 28490232 - 28490160
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||  || |||||||||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  28490232 aatatggtcaaagtaaactatgtcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagta 28490160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 29253551 - 29253479
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| || |||| |||| ||||||||| ||||||    
T  29253551 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggatggagta 29253479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 31932174 - 31932246
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||  ||||||||||||||| ||||||||| || |||| |||| ||||||||||||||||    
T  31932174 aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggagggagta 31932246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 41414275 - 41414203
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| |||| || |||| | ||||||||||||||    
T  41414275 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtaatctattgcaggacggagggagta 41414203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 50014557 - 50014629
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||| ||||||||||| ||||||||| | ||||| ||| |||||||||||||||||    
T  50014557 aatatggtcaaagtaagctagatcaaaattgcaaattttcaaataagtcatctatgacgggacggagggagta 50014629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 36035758 - 36035703
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||    
T  36035758 aatatgatcaaagtaaattagatcaaaattacacatttttaaacaggtcatttatt 36035703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 48389138 - 48389083
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  48389138 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttatt 48389083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 44452267 - 44452197
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 83  Q
    |||||| ||||||||||||||||||||||| ||||||||||||  || ||| |||| |||||| |||||||    
T  44452267 aatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggacatctattgcgggacagagggag 44452197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 31651897 - 31651960
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacg 76  Q
    |||||| ||||| ||||  |||| ||||||||||||||||||| |||||||||||| |||||||    
T  31651897 aatatggtcaaattaagccaggttaaaattgcacattttcaaataggtcatttattgcgggacg 31651960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 10648197 - 10648255
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacg 71  Q
    |||||| ||||| ||||||||||||||||| |||||||||||| || |||| |||||||    
T  10648197 aatatggtcaaaataagttaggtcaaaattacacattttcaaatagatcatctattacg 10648255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 40883483 - 40883445
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  40883483 aatatgatcaaagtaagttaggtcaaaatttcacatttt 40883445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 2126724 - 2126652
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| ||||||||||||| |||||||| ||| | ||||| |||| ||| | ||||||||||    
T  2126724 aatatggtcaaagtaaattaggtcaaaattacacatttttaaataagtcatctattgcggaatggagggagta 2126652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 48312100 - 48312029
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||| ||||||| ||||||| | ||||||||||||||||||||  |||||| |||| |||||| |||||||||    
T  48312100 aatacgatcaaaataagttaagccaaaattgcacattttcaaa-tggtcatctattgcgggactgagggagta 48312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 38786942 - 38787001
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgg 72  Q
    ||||||||||||||||||||  ||||||||||| |||||||||  | |||| ||||||||    
T  38786942 aatatgatcaaagtaagttatatcaaaattgcatattttcaaatggatcatctattacgg 38787001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 44741415 - 44741360
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||| ||||| |||||||| |||||||||||||| |||||| | ||||||||||    
T  44741415 aatatggtcaaaataagttagatcaaaattgcacatattcaaatatgtcatttatt 44741360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 52688594 - 52688559
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||| ||||||||||||    
T  52688594 tcaaagtaagttaggtcaaaattccacattttcaaa 52688559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 49903681 - 49903719
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  49903681 aatatgatcaaagtaaattaggtcaaaatttcacatttt 49903719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 3138676 - 3138605
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||| |||||||   ||||||||||||  |||||| ||||||||||| | |||||||    
T  3138676 aatatggtcaaagtaagttatgtcaaaaacacacattttcaaa-tggtcatctattacgggactgtgggagta 3138605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 22328150 - 22328222
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||| || ||||||| | |||||||| ||||| | ||||| || || |||||||||||||||    
T  22328150 aatatggtcaaagtatgtcaggtcaatagtgcacattgtcaaataagtcatctaatatgggacggagggagta 22328222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 43453161 - 43453233
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||||||||||||||||| ||||| | ||||   ||||| || | ||||||||||||||||    
T  43453161 aatatggtcaaaataagttaggtcaaaattacacatctgcaaatgagtcatctaatgcgggacggagggagta 43453233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7724602 - 7724672
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 83  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7724602 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggag 7724672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 12209061 - 12208989
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12209061 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggaagta 12208989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 16127771 - 16127842
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagt 84  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  16127771 aatatgatcaaagtaagttaggtcaaaattacacattttcaaataggtcatttattgcgggacggagggagt 16127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 8373506 - 8373434
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  8373506 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacagagggagta 8373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 38963867 - 38963795
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  38963867 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacagagggagta 38963795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 40471808 - 40471736
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  40471808 aatatgatcaaaataagttaagtcaaaattgcacattttcaaacaggttatttattgcgggacggagggagta 40471736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 41575634 - 41575562
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  41575634 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggagggagta 41575562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 31603414 - 31603477
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  31603414 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagggag 31603477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 5096320 - 5096248
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  5096320 aatatgatcaaaataagttatgtcaaaattgtacattttcaaacaggtaatttattgcgggacggagggagta 5096248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 10333569 - 10333641
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  10333569 aatatggtcaaaataagttaggtcaaaattacacattttcaaacagatcatttattacgagacggagggagta 10333641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 16126073 - 16126145
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  16126073 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggagagagta 16126145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 16333552 - 16333480
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  16333552 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggagagagta 16333480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 41436904 - 41436832
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||    
T  41436904 aatatggtcaaagtaagttaggtcaaaattatacattttcaaacatttcatttattacgggacggagggagta 41436832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11277623 - 11277562
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacggga 74  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  11277623 aatatgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcatttattgcggga 11277562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 4137481 - 4137407
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagta 88  Q
    |||||||||||| ||| |||| ||||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  4137481 aatatgatcaaa-taaattagatcaaaattgtacattttcaaacatgtcatttattgcgggacggagggagtagta 4137407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 8896343 - 8896271
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||| |||| ||| | ||||||||||    
T  8896343 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattgcggaatggagggagta 8896271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 22718534 - 22718606
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| || |||||||||||| ||||||| |||||    
T  22718534 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatttattacgcgacggagagagta 22718606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 37987927 - 37987982
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  37987927 aatatgatcaaagtaacttagatcaaaattgcgcattttcaaacaggtcatttatt 37987982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 18504544 - 18504472
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||| | ||||| |||||||||||||||| ||||    
T  18504544 aatatggtcaaaataagttacgtcaaaattacacattttcaaataagtcatctattacgggacggaggaagta 18504472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 6730094 - 6730166
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||| ||||| ||||||||||||||| ||||||||  ||||||| |||| || |||||||||||||    
T  6730094 aatatggtcaatgtaagctaggtcaaaattgcaaattttcaagtaggtcatctattgcgagacggagggagta 6730166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 37316947 - 37316876
Alignment:
Q  14 atatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| |||||||||   |||||||||||||| ||||||||| |||||||  ||| ||||||||||||||||    
T  37316947 atatggtcaaagtaaaccaggtcaaaattgcaaattttcaaataggtcatcgattgcgggacggagggagta 37316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 2831779 - 2831706
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtag 86  Q
    |||||| ||||||||||||||||||||||| |||||||| |||  | ||||||||  ||| |||| ||||||||    
T  2831779 aatatggtcaaagtaagttaggtcaaaattacacatttttaaatggatcatttatcgcggtacggtgggagtag 2831706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 15177441 - 15177376
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacgga 78  Q
    |||||| |||||||||||||  | ||||||| ||||||||||| ||||||| ||||||| ||||||    
T  15177441 aatatggtcaaagtaagttaaattaaaattgtacattttcaaataggtcatctattacgagacgga 15177376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 20682719 - 20682654
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||| | ||||||||||||| ||||| ||| ||||||  |||| ||||||||||||||||    
T  20682719 tcaaagtaagctgggtcaaaattgcaaatttttaaataggtcaactattgcgggacggagggagta 20682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 25766516 - 25766444
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| || |||||  ||||||||| | ||||||||||||||||| |||| |||||| ||||||| ||||||    
T  25766516 aatatggtcgaagtatattaggtcaatagtgcacattttcaaacagatcatctattacaggacggaaggagta 25766444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 44022333 - 44022297
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaac 56  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44022333 tcaaagtaagttaggttaaaattgcacattttcaaac 44022297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 25762249 - 25762194
Alignment:
Q  30 ttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||| | ||||||||||||||||| |||| |||||  ||||||||||||||    
T  25762249 ttaggtcaatagtgcacattttcaaacagatcatctattataggacggagggagta 25762194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 6075197 - 6075120
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagtatc 90  Q
    |||||| |||||||||||||  ||||||||| | ||||||||||  ||||| |||| || |||||||| |||| ||||    
T  6075197 aatatggtcaaagtaagttaaatcaaaattgaaaattttcaaacgagtcatctattgcgcgacggaggtagtactatc 6075120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 16646318 - 16646249
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 82  Q
    |||||| |||||||||| |||||||||||| || ||||| ||| || |||||||||  ||||| ||||||    
T  16646318 aatatggtcaaagtaagctaggtcaaaattacaaatttttaaatagctcatttattgtgggactgaggga 16646249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 45036423 - 45036363
Alignment:
Q  25 gtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||| ||||||||| |||||||| |||  |||||| |||| | ||||||||||||||    
T  45036423 gtaagttaagtcaaaattacacatttttaaatgggtcatctattgcaggacggagggagta 45036363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 30464504 - 30464432
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  30464504 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 30464432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 4327108 - 4327183
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagta 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  4327108 aatatgatcaaagtaagttagatcaaaattgcacattttcaaacaagtcatttattgcgggacgcagggagtagta 4327183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 38842235 - 38842162
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcaca-ttttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  38842235 aatatgatcaaagtaagttaggtcaaaattacacatttttcaaacaggtcatttattacgggacggaggaagta 38842162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 23437802 - 23437874
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23437802 aatatggtcaaagcaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 23437874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 761622 - 761550
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  761622 aatatggtcaaagtaaattaggtcaaaattacacattttcaaacaggtcatttattgcgggacagagggagta 761550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 25691586 - 25691658
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||    
T  25691586 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcggaacggatggagta 25691658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 28583292 - 28583364
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  28583292 aatatgctcaaagtaaattaggtcaaaattgcacattttcaaaaaggtcatctattgcgggacggagggagta 28583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 14378682 - 14378747
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||    
T  14378682 tcaaagtaagttaggtcaaaattgcacattttcaaacctatcatttattgcgggacggagggagta 14378747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 15870247 - 15870175
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||| |||| |||||||||  ||||||||||||||| ||||||||| ||||||||||||||    
T  15870247 aatatgatcaaagtaaattagatcaaaattgttcattttcaaacaggttatttattactggacggagggagta 15870175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 23547140 - 23547068
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| ||||||||||||||| |||||||| |||| ||| ||||||||||||||||| |||||||||||||||    
T  23547140 aatattatcaaagtaagttagatcaaaattacacaattttaaacaggtcatttattatgggacggagggagta 23547068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 25009216 - 25009144
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||||| ||||    
T  25009216 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacagatcatttattgagggacggaggaagta 25009144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 37094204 - 37094132
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||    
T  37094204 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggaggaagta 37094132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 44887704 - 44887776
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| ||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  44887704 aatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgggacggagggagta 44887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 3466349 - 3466283
Alignment:
Q  19 atcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||||||||||||||||||||||| ||||||||||  |||||| |||| ||||||||||||||||    
T  3466349 atcaaagtaagttaggtcaaaattgcgcattttcaaatgggtcatctattgcgggacggagggagta 3466283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 4960223 - 4960151
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| || |||| |||||||||||||| ||||||    
T  4960223 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattacgggacggaaggagta 4960151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 8496875 - 8496947
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||  |||||| |||||||| |||||    
T  8496875 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcaactattacaggacggagagagta 8496947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 40645681 - 40645609
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||||||||||||||||| | |||||||||  || ||| |||| ||||||||||||||||    
T  40645681 aatatgatcaaagtaagttaggtcaaaattgaaaattttcaaatgggccatctattgcgggacggagggagta 40645609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 43184768 - 43184840
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||  |||||||| |||||||||||||||| | ||| ||||||||||    
T  43184768 aatatggtcaaagtaagttaggtcaaaataacacatttttaaacaggtcatttattgcaggatggagggagta 43184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 44717368 - 44717293
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagta 88  Q
    ||||||||||||||||||||| |||||||| ||||||||||||  | ||||  ||| |||||||||||||||||||    
T  44717368 aatatgatcaaagtaagttagttcaaaattacacattttcaaatggatcatccattgcgggacggagggagtagta 44717293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 11756848 - 11756776
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||||||||||||||| ||||||||| | ||||| |||| ||| || |||||||||    
T  11756848 aatatggtcaaagtaagttaggtcaaaattgcaaattttcaaataagtcatctattgcggaacagagggagta 11756776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 20671328 - 20671256
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||| ||||||||||||  | |||| |||| || |||||||||||||    
T  20671328 aatatggtcaaagtaagttaggtcaaaattacacattttcaaattgatcatctattgcgcgacggagggagta 20671256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 14584196 - 14584268
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||| ||| ||||||||  | ||||||||| || |||| ||||| |||||||||||||||    
T  14584196 aatatgatcaaagtaagctagatcaaaattataaattttcaaatagatcatctattatgggacggagggagta 14584268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 30653432 - 30653360
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||||||| | ||||||||||||||| |||  || ||| |||||||||||||| ||||||    
T  30653432 aatatggtcaaagtaagttagattaaaattgcacatttttaaattgggcatctattacgggacggatggagta 30653360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 17523877 - 17523822
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttatt 68  Q
    ||||||||||||||||||||||| |||| ||||||||||||||  |||||| ||||    
T  17523877 aatatgatcaaagtaagttaggttaaaactgcacattttcaaatgggtcatctatt 17523822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 21132917 - 21132959
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  21132917 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaa 21132959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 5777543 - 5777615
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| | ||| |||| ||| |||||||| ||||||||||||||||||||||||| | ||| ||| ||||||    
T  5777543 aatatggttaaaataagatagatcaaaattacacattttcaaacaggtcatttattgcaggatggatggagta 5777615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 44947089 - 44947018
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| ||||||||||  ||||||||||||||||||||| |||  |||||| |||| | ||||||||||||||    
T  44947089 aatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgc-ggacggagggagta 44947018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 44361992 - 44361921
Alignment:
Q  14 atatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| |||||||||  ||| ||||||||||| ||||||||| ||||||| |||| |||||  |||||||||    
T  44361992 atatggtcaaagtaaactagctcaaaattgcaaattttcaaataggtcatctattgcgggaatgagggagta 44361921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 12893717 - 12893791
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtagt 87  Q
    |||||| |||||||| |||| ||||| | |||| ||| ||||| |||||||||| |  |||||||||||||||||    
T  12893717 aatatggtcaaagtatgttaagtcaataatgcatattgtcaaataggtcatttactgagggacggagggagtagt 12893791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 7475374 - 7475446
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||| ||| | ||||||||| ||||| ||| | ||||| |||| ||| || |||||||||    
T  7475374 aatatgatcaaagtaagctagattaaaattgcaaatttttaaatacgtcatctattgcggaactgagggagta 7475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 29616315 - 29616387
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||||||||||||||||||| ||||||||  | |||||||||  ||| |||||||   || |||||||||||    
T  29616315 aatatgatcaaagtaagttagatcaaaatttaatattttcaaatgggttatttattgtaggtcggagggagta 29616387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 44039897 - 44039833
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacgg 77  Q
    |||||||||||| ||||  || |||||||||||||||||||||  | ||||||||| | ||||||    
T  44039897 aatatgatcaaactaagccagatcaaaattgcacattttcaaatggatcatttattgcaggacgg 44039833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 184038 - 183966
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  184038 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggttatttattgcgagacggagggagta 183966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 13176 - 13104
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||    
T  13176 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaacaggtcatttattgtgggacggagggagta 13104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 23941 - 24011
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||   ||||| |||| ||||||||||||||    
T  23941 aatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggagggag 24011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 667 - 739
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||| |||||||||||||||||||| |||||||||  |||||| |||| |||| |||||||||||    
T  667 aatatggtcaaactaagttaggtcaaaattgcatattttcaaatgggtcatctattgcggggcggagggagta 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 1448 - 1520
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||| ||||||||| |||||||| ||| |  |||| |||||||||| |||| |||||    
T  1448 aatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgggatggagagagta 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 865 - 793
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    |||||| ||||||||||||| ||||||||| |||||||| ||| |  |||| |||||||||| |||| |||||    
T  865 aatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgggatggagagagta 793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 3067 - 2996
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| ||||||||||  ||||||||||||||||||||| |||  |||||| |||| | ||||||||||||||    
T  3067 aatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgc-ggacggagggagta 2996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 9198 - 9165
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| |||||||||||||||||||||    
T  9198 aaagtaagttagatcaaaattgcacattttcaaa 9165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 4506 - 4441
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 85  Q
    ||||| |||||||||||||||||||||||||| |||    ||||||||| | ||||||| ||||||    
T  4506 tcaaaataagttaggtcaaaattgcacatttttaaatgaatcatttattgcaggacggaaggagta 4441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University