View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19425_low_8 (Length: 649)

Name: NF19425_low_8
Description: NF19425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19425_low_8
NF19425_low_8
[»] chr2 (47 HSPs)
chr2 (6-632)||(26690892-26691518)
chr2 (310-391)||(8410163-8410244)
chr2 (310-391)||(10823092-10823173)
chr2 (310-391)||(38005434-38005515)
chr2 (313-401)||(12455345-12455433)
chr2 (309-391)||(7747305-7747387)
chr2 (310-391)||(41220667-41220748)
chr2 (310-397)||(25540391-25540478)
chr2 (309-355)||(26805327-26805373)
chr2 (310-391)||(2528334-2528415)
chr2 (310-391)||(13026404-13026485)
chr2 (309-391)||(14853359-14853442)
chr2 (310-391)||(16325627-16325708)
chr2 (310-391)||(28616372-28616453)
chr2 (310-391)||(34346280-34346361)
chr2 (309-350)||(39806919-39806960)
chr2 (310-391)||(44139516-44139597)
chr2 (316-389)||(44945631-44945704)
chr2 (309-385)||(9360747-9360823)
chr2 (309-385)||(18649025-18649101)
chr2 (310-390)||(22593166-22593245)
chr2 (309-384)||(2784963-2785038)
chr2 (310-385)||(6358150-6358225)
chr2 (309-351)||(10026649-10026691)
chr2 (310-391)||(20612527-20612609)
chr2 (310-355)||(331533-331578)
chr2 (215-292)||(20469922-20469999)
chr2 (313-385)||(2550903-2550975)
chr2 (310-385)||(12864256-12864331)
chr2 (314-385)||(14169608-14169679)
chr2 (309-356)||(24179599-24179646)
chr2 (310-385)||(27725972-27726047)
chr2 (310-385)||(33005783-33005858)
chr2 (310-356)||(7787088-7787134)
chr2 (309-391)||(34130295-34130377)
chr2 (323-393)||(34738324-34738394)
chr2 (309-351)||(39201541-39201583)
chr2 (314-352)||(41187885-41187923)
chr2 (310-351)||(3643920-3643961)
chr2 (318-391)||(3811684-3811757)
chr2 (310-391)||(28525448-28525529)
chr2 (310-351)||(38962795-38962836)
chr2 (310-391)||(41031899-41031980)
chr2 (315-351)||(10046510-10046546)
chr2 (309-385)||(16813164-16813240)
chr2 (309-385)||(16852443-16852519)
chr2 (310-354)||(30721885-30721929)
[»] chr6 (34 HSPs)
chr6 (5-291)||(15924777-15925064)
chr6 (6-263)||(7091611-7091876)
chr6 (11-291)||(15949323-15949604)
chr6 (37-291)||(15956803-15957058)
chr6 (18-291)||(10514729-10515003)
chr6 (314-391)||(14107351-14107428)
chr6 (310-391)||(9633618-9633699)
chr6 (310-391)||(12635850-12635931)
chr6 (310-391)||(13035997-13036078)
chr6 (310-391)||(21898684-21898765)
chr6 (61-291)||(21697403-21697634)
chr6 (309-391)||(5029852-5029934)
chr6 (309-391)||(30788846-30788928)
chr6 (310-391)||(5253216-5253297)
chr6 (310-391)||(6606090-6606171)
chr6 (309-398)||(10396508-10396597)
chr6 (310-391)||(14783413-14783494)
chr6 (310-391)||(3601120-3601201)
chr6 (310-391)||(29444758-29444839)
chr6 (309-385)||(13391321-13391397)
chr6 (322-394)||(17114887-17114959)
chr6 (309-351)||(8888917-8888959)
chr6 (309-355)||(12606465-12606511)
chr6 (310-391)||(8932697-8932778)
chr6 (310-391)||(8944163-8944244)
chr6 (310-391)||(13468969-13469050)
chr6 (310-391)||(19089534-19089615)
chr6 (309-385)||(29333138-29333214)
chr6 (309-400)||(11142638-11142729)
chr6 (309-350)||(375008-375049)
chr6 (314-391)||(8611967-8612044)
chr6 (322-387)||(14326045-14326110)
chr6 (322-387)||(14419055-14419120)
chr6 (314-391)||(30410485-30410562)
[»] chr5 (42 HSPs)
chr5 (64-291)||(31290408-31290636)
chr5 (33-291)||(8723261-8723520)
chr5 (310-402)||(9805037-9805129)
chr5 (310-391)||(1538464-1538545)
chr5 (310-391)||(4016248-4016329)
chr5 (63-116)||(13066320-13066373)
chr5 (310-391)||(22295249-22295330)
chr5 (310-391)||(39099772-39099853)
chr5 (310-391)||(42861211-42861292)
chr5 (314-390)||(42086364-42086440)
chr5 (310-391)||(5731913-5731994)
chr5 (310-391)||(9168246-9168327)
chr5 (310-391)||(19572757-19572838)
chr5 (313-384)||(20525874-20525945)
chr5 (321-391)||(7616964-7617034)
chr5 (309-391)||(21375383-21375465)
chr5 (314-384)||(35561818-35561888)
chr5 (310-400)||(38897703-38897793)
chr5 (310-391)||(9812905-9812986)
chr5 (310-391)||(12766164-12766245)
chr5 (314-351)||(20255406-20255443)
chr5 (310-391)||(20682610-20682691)
chr5 (314-351)||(35813031-35813068)
chr5 (310-391)||(43399161-43399242)
chr5 (310-398)||(8513552-8513640)
chr5 (319-391)||(40773315-40773387)
chr5 (310-349)||(38369732-38369771)
chr5 (309-351)||(14974357-14974399)
chr5 (310-356)||(20228750-20228796)
chr5 (309-391)||(25452957-25453038)
chr5 (309-391)||(41163453-41163535)
chr5 (314-391)||(12705051-12705128)
chr5 (314-351)||(14588650-14588687)
chr5 (314-355)||(18262647-18262688)
chr5 (315-384)||(19839365-19839434)
chr5 (310-391)||(20590032-20590113)
chr5 (310-391)||(23383690-23383771)
chr5 (310-355)||(24463915-24463960)
chr5 (310-347)||(40117448-40117485)
chr5 (312-352)||(2485231-2485271)
chr5 (309-353)||(6764488-6764532)
chr5 (310-394)||(39728420-39728504)
[»] chr8 (29 HSPs)
chr8 (11-291)||(7993711-7993991)
chr8 (310-391)||(10927642-10927723)
chr8 (310-391)||(14846611-14846692)
chr8 (310-391)||(43032937-43033018)
chr8 (316-391)||(39969908-39969983)
chr8 (314-355)||(583852-583893)
chr8 (310-391)||(2467111-2467192)
chr8 (315-384)||(3379812-3379881)
chr8 (310-391)||(3418506-3418587)
chr8 (310-391)||(15884549-15884630)
chr8 (310-384)||(4479296-4479370)
chr8 (309-391)||(13831007-13831089)
chr8 (310-352)||(33935767-33935809)
chr8 (310-391)||(6100508-6100589)
chr8 (310-399)||(9859980-9860069)
chr8 (314-355)||(33401828-33401869)
chr8 (315-391)||(45521209-45521285)
chr8 (340-391)||(1653853-1653904)
chr8 (340-391)||(1742229-1742280)
chr8 (316-391)||(8803096-8803171)
chr8 (61-112)||(28163383-28163434)
chr8 (310-391)||(2964112-2964193)
chr8 (310-355)||(6042857-6042902)
chr8 (209-246)||(11109046-11109083)
chr8 (310-387)||(14666068-14666145)
chr8 (314-351)||(18374050-18374087)
chr8 (318-391)||(43027349-43027422)
chr8 (308-400)||(993222-993314)
chr8 (314-394)||(17981481-17981561)
[»] chr4 (47 HSPs)
chr4 (12-291)||(13906653-13906933)
chr4 (310-385)||(7246645-7246720)
chr4 (310-400)||(29895824-29895914)
chr4 (310-391)||(16645155-16645236)
chr4 (310-391)||(49260658-49260739)
chr4 (309-385)||(14124052-14124128)
chr4 (310-394)||(38166064-38166148)
chr4 (312-391)||(48834693-48834772)
chr4 (309-403)||(14567275-14567369)
chr4 (309-387)||(35359772-35359850)
chr4 (309-391)||(53599096-53599178)
chr4 (309-354)||(15839965-15840010)
chr4 (310-391)||(16450337-16450418)
chr4 (310-399)||(38168294-38168382)
chr4 (310-391)||(42722570-42722651)
chr4 (310-391)||(50485980-50486061)
chr4 (309-373)||(54946285-54946349)
chr4 (314-385)||(8064797-8064868)
chr4 (312-391)||(21192679-21192758)
chr4 (321-400)||(38841352-38841431)
chr4 (310-352)||(3574478-3574520)
chr4 (310-352)||(17080080-17080122)
chr4 (310-360)||(20354674-20354724)
chr4 (310-384)||(40780861-40780935)
chr4 (310-351)||(1446863-1446904)
chr4 (310-391)||(3159462-3159543)
chr4 (310-355)||(5472877-5472922)
chr4 (310-391)||(20421810-20421891)
chr4 (310-355)||(20532438-20532483)
chr4 (310-355)||(36262796-36262841)
chr4 (310-391)||(47078495-47078576)
chr4 (310-402)||(8889059-8889150)
chr4 (315-351)||(36145248-36145284)
chr4 (310-385)||(31588723-31588798)
chr4 (314-385)||(42722378-42722449)
chr4 (313-391)||(4738658-4738736)
chr4 (309-391)||(37369035-37369117)
chr4 (309-391)||(47682375-47682457)
chr4 (310-391)||(20128346-20128427)
chr4 (309-350)||(25103783-25103824)
chr4 (310-391)||(29588773-29588854)
chr4 (310-351)||(40272364-40272405)
chr4 (310-391)||(48015066-48015147)
chr4 (310-391)||(52950119-52950200)
chr4 (310-391)||(55921071-55921152)
chr4 (311-351)||(6779249-6779289)
chr4 (314-398)||(17946530-17946614)
[»] chr3 (47 HSPs)
chr3 (37-291)||(15788598-15788853)
chr3 (310-391)||(6462444-6462525)
chr3 (310-401)||(3136678-3136769)
chr3 (314-391)||(26207795-26207872)
chr3 (314-391)||(49021197-49021274)
chr3 (310-398)||(25294992-25295080)
chr3 (51-273)||(14505235-14505458)
chr3 (310-391)||(29127951-29128032)
chr3 (314-391)||(41630506-41630583)
chr3 (310-391)||(47749099-47749180)
chr3 (310-391)||(54237480-54237561)
chr3 (310-391)||(54261258-54261339)
chr3 (310-385)||(35315988-35316063)
chr3 (314-380)||(50405608-50405674)
chr3 (310-391)||(8164585-8164666)
chr3 (310-391)||(15320218-15320299)
chr3 (314-391)||(24506642-24506719)
chr3 (310-391)||(28572205-28572286)
chr3 (310-391)||(29135945-29136026)
chr3 (310-391)||(34374436-34374517)
chr3 (310-391)||(51060275-51060356)
chr3 (310-390)||(47219176-47219256)
chr3 (310-389)||(3507529-3507608)
chr3 (310-385)||(29762155-29762230)
chr3 (310-352)||(26043844-26043886)
chr3 (310-391)||(2668093-2668174)
chr3 (310-391)||(7328876-7328956)
chr3 (318-391)||(13893966-13894039)
chr3 (310-355)||(39849103-39849148)
chr3 (310-351)||(49198383-49198424)
chr3 (309-385)||(2030477-2030553)
chr3 (315-391)||(26923255-26923331)
chr3 (310-394)||(45877486-45877570)
chr3 (321-391)||(7310697-7310767)
chr3 (309-347)||(23511598-23511636)
chr3 (309-351)||(33251693-33251735)
chr3 (321-391)||(50753335-50753405)
chr3 (314-384)||(51682955-51683025)
chr3 (310-355)||(30767277-30767322)
chr3 (314-355)||(43330762-43330803)
chr3 (318-391)||(44064584-44064657)
chr3 (310-351)||(47303523-47303564)
chr3 (310-399)||(48342052-48342141)
chr3 (309-397)||(8362608-8362696)
chr3 (310-350)||(11687144-11687184)
chr3 (309-361)||(28242309-28242361)
chr3 (315-391)||(35998565-35998641)
[»] chr1 (40 HSPs)
chr1 (11-291)||(26420050-26420331)
chr1 (310-391)||(2980925-2981006)
chr1 (310-391)||(49078147-49078228)
chr1 (309-399)||(50094936-50095026)
chr1 (310-399)||(10422821-10422910)
chr1 (310-391)||(43959815-43959896)
chr1 (45-288)||(25596073-25596317)
chr1 (51-291)||(38533948-38534189)
chr1 (51-291)||(38556166-38556407)
chr1 (309-391)||(11397883-11397965)
chr1 (310-391)||(8764024-8764105)
chr1 (310-387)||(26325845-26325922)
chr1 (310-391)||(41663850-41663931)
chr1 (209-291)||(22160491-22160573)
chr1 (310-400)||(37339853-37339943)
chr1 (310-391)||(5855555-5855636)
chr1 (310-391)||(10172965-10173046)
chr1 (310-391)||(17641998-17642079)
chr1 (310-391)||(18915900-18915981)
chr1 (310-391)||(44969697-44969778)
chr1 (209-261)||(4178711-4178763)
chr1 (308-391)||(35908789-35908870)
chr1 (310-391)||(4581676-4581757)
chr1 (310-391)||(33004009-33004090)
chr1 (310-351)||(33498873-33498914)
chr1 (310-391)||(34697368-34697449)
chr1 (314-391)||(34719813-34719890)
chr1 (310-391)||(45361876-45361957)
chr1 (310-385)||(2567309-2567384)
chr1 (309-388)||(17389803-17389882)
chr1 (310-385)||(21849205-21849280)
chr1 (314-401)||(50503345-50503432)
chr1 (310-352)||(18708573-18708615)
chr1 (320-402)||(35211155-35211237)
chr1 (334-391)||(892296-892353)
chr1 (310-391)||(30927721-30927802)
chr1 (310-391)||(40288471-40288552)
chr1 (310-351)||(46929772-46929813)
chr1 (315-391)||(26660176-26660251)
chr1 (310-350)||(28324615-28324655)
[»] scaffold0530 (1 HSPs)
scaffold0530 (6-191)||(10327-10513)
[»] chr7 (31 HSPs)
chr7 (45-291)||(5085170-5085417)
chr7 (212-291)||(19019948-19020027)
chr7 (310-391)||(48804718-48804799)
chr7 (310-401)||(13095893-13095984)
chr7 (310-385)||(38578866-38578941)
chr7 (310-385)||(27028314-27028389)
chr7 (310-391)||(10047869-10047950)
chr7 (310-391)||(21190773-21190854)
chr7 (310-385)||(41945508-41945583)
chr7 (309-391)||(4228747-4228829)
chr7 (310-384)||(27875088-27875162)
chr7 (309-391)||(42210255-42210337)
chr7 (310-391)||(1605976-1606057)
chr7 (314-391)||(34659265-34659342)
chr7 (309-350)||(43862006-43862047)
chr7 (310-387)||(47341911-47341988)
chr7 (52-112)||(5612331-5612391)
chr7 (310-390)||(23658214-23658294)
chr7 (316-391)||(24983411-24983487)
chr7 (309-400)||(3353458-3353549)
chr7 (315-385)||(3603397-3603467)
chr7 (310-404)||(16802158-16802252)
chr7 (310-391)||(45758322-45758401)
chr7 (309-386)||(4195200-4195277)
chr7 (310-391)||(8734679-8734760)
chr7 (310-391)||(17748375-17748456)
chr7 (310-391)||(22993360-22993441)
chr7 (310-391)||(28744197-28744278)
chr7 (310-351)||(39420872-39420913)
chr7 (310-391)||(39474975-39475056)
chr7 (310-386)||(43346777-43346853)
[»] scaffold0009 (1 HSPs)
scaffold0009 (310-385)||(42831-42906)
[»] scaffold0291 (1 HSPs)
scaffold0291 (310-391)||(6890-6971)
[»] scaffold0004 (2 HSPs)
scaffold0004 (309-391)||(94973-95056)
scaffold0004 (310-394)||(7825-7909)
[»] scaffold0155 (1 HSPs)
scaffold0155 (310-384)||(19290-19364)
[»] scaffold0005 (1 HSPs)
scaffold0005 (309-403)||(250006-250100)
[»] scaffold0209 (1 HSPs)
scaffold0209 (314-355)||(12612-12653)
[»] scaffold0010 (1 HSPs)
scaffold0010 (310-391)||(155704-155785)
[»] scaffold0029 (1 HSPs)
scaffold0029 (310-391)||(41079-41160)
[»] scaffold0001 (1 HSPs)
scaffold0001 (310-391)||(65145-65226)
[»] scaffold0316 (1 HSPs)
scaffold0316 (313-386)||(1612-1685)
[»] scaffold0170 (1 HSPs)
scaffold0170 (310-351)||(9880-9921)
[»] scaffold0116 (1 HSPs)
scaffold0116 (314-355)||(17429-17470)
[»] scaffold0016 (1 HSPs)
scaffold0016 (310-391)||(8694-8775)
[»] scaffold0002 (1 HSPs)
scaffold0002 (310-391)||(319457-319538)
[»] scaffold0011 (1 HSPs)
scaffold0011 (315-391)||(224357-224433)


Alignment Details
Target: chr2 (Bit Score: 413; Significance: 0; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 6 - 632
Target Start/End: Original strand, 26690892 - 26691518
Alignment:
Q  6 agtagcaaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaa 105  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26690892 agtaacaaagggtttcattggttatcttgggaaaagttatcggtgcacaaaaaccatggaagtatggatttcaaagatttggtagcttttaatgttgcaa 26690991  T
Q  106 tgcttggaaaaa-gggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtc 204  Q
    |||||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  26690992 tgcttggaaaaacgggctggaaactacaaactgattcagatagtttagtttcaagaatttttaaagtcgagtattaccctaatagtagctacctggagtc 26691091  T
Q  205 gaagttgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgggtaataataagac 304  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26691092 gaagt-gggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgggtaataataagac 26691190  T
Q  305 ttgctttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaataata 404  Q
    ||| |||||||||||||||      ||| ||||||  |||||| ||||||||||||| |  |||||||| |||| |||||||||||| ||||||||||||    
T  26691191 ttgttttggccagtgcgca------tacgcatgagctggattaatcgcccattattaatgagtcggaaaccggtacgaaagccaaaacaataaaataata 26691284  T
Q  405 agacttgctaagctagtgtaaagtttttaaagtgaattttctgtgataagaacatcctaatgtgaagcgtgggagttattcaggcttgggaagtccaaaa 504  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26691285 agacttgctaagctaatgtacagttttttaagtgaattttctgtgataagaacatcctaatgtgaagcgtgggagttattcaggcttgggaagtccaaaa 26691384  T
Q  505 tattaaac----nnnnnnnnnnattgaatgtaagttaaggttaagctttatcttgattgattttattattatttttgaactct--ttnnnnnnnntggtt 598  Q
    ||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||    
T  26691385 tattaaacttttttttttttttattgaatgtaagttaaggttaagctttatcttgattgattttattattatttttgaactctccaaaaaaaaaatggtt 26691484  T
Q  599 gaattagtgtattgggggttatcacaaaatttgt 632  Q
    ||||||||||||||||||||||||||||||||||    
T  26691485 gaattagtgtattgggggttatcacaaaatttgt 26691518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 8410163 - 8410244
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||| | || |  ||||||||| |||||||||||||||||    
T  8410163 ttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaagccaaaa 8410244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 10823092 - 10823173
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||   || || ||||||||| |||||||||||||||||    
T  10823092 ttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaaagccaaaa 10823173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 38005434 - 38005515
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||||||||| |||||||||||||||   || || | |||||||  ||||||||||||||||    
T  38005434 ttggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaagccaaaa 38005515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 12455345 - 12455433
Alignment:
Q  313 gccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaata 401  Q
    |||||||||||||||||||| || ||| |||||||||||| ||  ||| || ||||||||| ||||||||||||||||| || ||||||    
T  12455345 gccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaata 12455433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 7747305 - 7747387
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||| |||||||||||| |||||| |||||||||||  ||   ||||| ||||||||| |||||||||||||||||    
T  7747305 tttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaa 7747387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 41220667 - 41220748
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| || ||||||||  ||   ||||| ||||||||| |||||||||||||||||    
T  41220667 ttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaa 41220748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 25540478 - 25540391
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataa 397  Q
    ||||||||||||||||||||||| || ||| ||||||||||| |||   || || ||||||||| |||||||||||| |||| |||||    
T  25540478 ttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaataa 25540391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 26805327 - 26805373
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  26805327 tttggccagtgcacatgcctctacgcatgagtcggattagtcgccca 26805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 2528415 - 2528334
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||| |||||||||||||||| || |||||||||||| |||  |||||  ||||||||  ||||||||||||||||    
T  2528415 ttggtcagtgtgcatgcctctacacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaagccaaaa 2528334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 13026485 - 13026404
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||||||  ||| | || ||||||| |||| || ||| ||||||||||    
T  13026485 ttggccagtgcgcatgcctctacgcatgagccggattagtcagccacttttggtaggtcagaaaccgatgcaaaagccaaaa 13026404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 14853442 - 14853359
Alignment:
Q  309 tttggccagtgcgcatgcctct--acacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||| ||||||||  || |||||||||||||||||| ||||  ||||| | ||| |||||||||||||||||||||    
T  14853442 tttggccagtgcgtatgcctctctactcatgagtcggattagtcgtccatctttagtggatcg-aaatcggtgcgaaagccaaaa 14853359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 16325627 - 16325708
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| |||||| | ||||||||| |||  ||| || ||||||||| |||||||||||| ||||    
T  16325627 ttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcaaaaa 16325708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 28616453 - 28616372
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||||||||||||||| || ||| | ||||||||||||||  ||||| |||| |||| |||||||||||| ||||    
T  28616453 ttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaaagcaaaaa 28616372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 34346361 - 34346280
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| |||||||| ||||| |||| ||   || || ||||||||| |||||||||||||||||    
T  34346361 ttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcgaaagccaaaa 34346280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 39806960 - 39806919
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtc 350  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  39806960 tttggccagtgcgcatgcctctacacacgagtcggattagtc 39806919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 44139516 - 44139597
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||| ||||||||| || ||| |||||||||||||||  | | || ||||||||| |||||||||||| ||||    
T  44139516 ttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaagcaaaaa 44139597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 44945631 - 44945704
Alignment:
Q  316 agtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaa 389  Q
    ||||||||||||||||| || ||| |||||||||||||||   ||||| | ||||||| |||||||||||||||    
T  44945631 agtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagccaa 44945704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 9360823 - 9360747
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||||||||||||||||||||||| || ||| || ||||||||||||   ||||| || |||||| |||||||||||    
T  9360823 tttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaag 9360747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 18649101 - 18649025
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| || | || || ||| ||||| || ||||||||    
T  18649101 tttgggcagtgcgcatgcctctacgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaaag 18649025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 390
Target Start/End: Original strand, 22593166 - 22593245
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaa 390  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||   || || |||||| || ||||||||||||||||    
T  22593166 ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcgg-aaccggtgcgaaagccaaa 22593245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 384
Target Start/End: Original strand, 2784963 - 2785038
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    ||||| |||||||||||||||||| |||||||| ||||||||| |||| |||  |  |||||||| ||||||||||    
T  2784963 tttggtcagtgcgcatgcctctacgcatgagtcagattagtcgtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 6358225 - 6358150
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||  ||| || ||||| ||| ||||| |||||    
T  6358225 ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaag 6358150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 10026691 - 10026649
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  10026691 tttggccagtgcgcatgcctctacgcatgagccggattagtcg 10026649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 20612609 - 20612527
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtc-ggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||  |||||| | |||||||||| |||  ||| || ||||||||| |||||||||| ||||||    
T  20612609 ttggccagtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaaaccaaaa 20612527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 331533 - 331578
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||    
T  331533 ttggccagtgcgcatgcttctacgcatgagccggattagtcgccca 331578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 20469922 - 20469999
Alignment:
Q  215 cataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattggg 292  Q
    |||||||| |||||||||||| | |||||| | ||||| |||||||| |||||||||||  | || ||||||||||||    
T  20469922 cataatcctagctttgtttggagaagcattcttagtgcaaaggtggtggttagacaaggagctcgatggaaaattggg 20469999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 2550903 - 2550975
Alignment:
Q  313 gccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| | || || ||| | ||| |||||||||||    
T  2550903 gccagtgcgcatgtctctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaag 2550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 12864256 - 12864331
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||| |||||||||||||||| | |||||| | ||||||||| |||  ||| || ||||||||| |||||||||||    
T  12864256 ttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 14169679 - 14169608
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||||||||||| |||||| |||||| ||||||||||| | |  ||| || ||||||||| |||||||||||    
T  14169679 ccagtgcgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 24179599 - 24179646
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccat 356  Q
    |||||||||||| ||||||||||| |||||| ||||||||||| ||||    
T  24179599 tttggccagtgcacatgcctctacgcatgagccggattagtcgtccat 24179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 27725972 - 27726047
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| ||  || |||||||||||||||  | | || ||||||||| ||||| |||||    
T  27725972 ttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 33005783 - 33005858
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| |||||| | ||||| |||| ||   ||||| ||||||||| || ||||||||    
T  33005783 ttggccagtgcgcatgcctctacgcatgaggcagattaatcgctcacctttagtgggtcggaaaccgatgcgaaag 33005858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 7787088 - 7787134
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccat 356  Q
    ||||||||| ||||||||||||| || ||| ||||||||||||||||    
T  7787088 ttggccagtacgcatgcctctacgcacgagccggattagtcgcccat 7787134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 34130377 - 34130295
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||| ||| |||| |||||| |||||| | ||||||||| | |  ||| |||| |||||||||||||||||||||||||    
T  34130377 tttgaccattgcacatgtctctacgcatgagccagattagtcgtctaccattggtagatcggaaatcggtgcgaaagccaaaa 34130295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 34738394 - 34738324
Alignment:
Q  323 atgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaata 393  Q
    |||||||||| || ||||||||||||||| |||  | | |||||||||||| |||||| ||||| ||||||    
T  34738394 atgcctctacgcacgagtcggattagtcgtccaccaatggtaggtcggaaaccggtgcaaaagcaaaaata 34738324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 39201583 - 39201541
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||| |||||||||||| |||||| |||||||||||    
T  39201583 tttggccagtgtgcatgcctctacgcatgagccggattagtcg 39201541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 41187885 - 41187923
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgc 352  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  41187885 ccagtgcgcatgcctctacgcatgagacggattagtcgc 41187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 3643961 - 3643920
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  3643961 ttggccagtgcgcatgcctctacgcatgagctggattagtcg 3643920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 391
Target Start/End: Complemental strand, 3811757 - 3811684
Alignment:
Q  318 tgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||| |||||| ||||||| |||||||   || || |||| |||| || ||||||||||||||    
T  3811757 tgcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaagccaaaa 3811684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 28525529 - 28525448
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| ||||||||||  |||   ||| | |||||||||  |||| |||||||||||    
T  28525529 ttggccagtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaactggtgtgaaagccaaaa 28525448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 38962795 - 38962836
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  38962795 ttggccagtgcgcatgcctctacgcatgaaccggattagtcg 38962836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 41031980 - 41031899
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| || ||| |||||||||| ||||   || || ||||||||| | |||||||||| ||||    
T  41031980 ttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaagctaaaa 41031899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 10046546 - 10046510
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    |||||||||||||||||| |||||| |||||||||||    
T  10046546 cagtgcgcatgcctctacgcatgagccggattagtcg 10046510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 16813240 - 16813164
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||| ||||| ||||||||||||  || ||| ||||||||||| ||||  || |||||| ||||||| |||||||||    
T  16813240 tttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaag 16813164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 16852519 - 16852443
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||| ||||| ||||||||||||  || ||| ||||||||||| ||||  || |||||| ||||||| |||||||||    
T  16852519 tttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaag 16852443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 30721929 - 30721885
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccc 354  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||||    
T  30721929 ttggtcagtgcgcatgtctctacgtatgagtcggattagtcgccc 30721885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 2e-63; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 5 - 291
Target Start/End: Complemental strand, 15925064 - 15924777
Alignment:
Q  5 gagtagcaaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgca 104  Q
    ||||| |||| |||| |||||||||||||||||||||||||| ||||| | ||| ||||||| ||||| |||||||||||||| | | ||||||||||||    
T  15925064 gagtaacaaaaggttacattggttatcttggaaaaagttatcagtgcatataaatcatggagctatgggtttcaaagatttggcatcctttaatgttgca 15924965  T
Q  105 atgcttggaaaa-agggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagt 203  Q
    |||||||||||| ||||||| | | |||||||||| ||| | |||||||||||||||| ||| ||||| |  || |||||| |||||||||| | ||| |    
T  15924964 atgcttggaaaagagggttggaaattacaaactgactcaaacagtttagtttcaagaactttcaaagctcgttaataccctcatagtagctatcaggaat 15924865  T
Q  204 cgaagttgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    | || || ||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||| | ||||| ||||||||    
T  15924864 caaaattaggaaataatccaagctttgtttggagtagcattttcagtgctaaggtggttgttaggaaaggtgctcgttgaaaaattgg 15924777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 6 - 263
Target Start/End: Complemental strand, 7091876 - 7091611
Alignment:
Q  6 agtagcaaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaa 105  Q
    |||| ||||||||||||||||||||||||| ||||||||||  || ||| ||| ||||  ||||||| |||||||||||||| ||| |||||| ||||||    
T  7091876 agtaacaaagggttgcattggttatcttgggaaaagttatcactgtacataaatcatgatggtatgggtttcaaagatttggcagcctttaatattgcaa 7091777  T
Q  106 tgcttggaaaa--agggttgaat------actacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacc 197  Q
    | |||||||||  ||| | |||       |||||||||||||||  | ||||||||||||||||| || ||||||| |||||||||||||| ||| || |    
T  7091776 tacttggaaaacaaggttggaaactacaaactacaaactgattcgaacagtttagtttcaagaatcttcaaagcccggtattaccctaataatagttatc 7091677  T
Q  198 tggagtcgaagttgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttg 263  Q
    || | | ||| |||||||||||||||||||||||||||||||| ||||| || ||  |||||||||    
T  7091676 tgaaatagaaattgggacataatccaagctttgtttggcgtagtatttttagcgcttaggtggttg 7091611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 291
Target Start/End: Original strand, 15949323 - 15949604
Alignment:
Q  11 caaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgctt 110  Q
    |||||| |||| ||||||||| ||| |||||||||| || |||||||| ||||||||||||| |||||||||| ||| ||| ||||||||||||||||||    
T  15949323 caaaggcttgcgttggttatcctgggaaaagttatcagtacacaaaaatcatggaggtatgggtttcaaagatctggcagcctttaatgttgcaatgctt 15949422  T
Q  111 ggaaaa-agggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagt 209  Q
    |||||| ||||||| |   |||||||||| ||| ||||||||  |||  || |||| ||||||   |||||||| ||||| |||||| || | ||||| |    
T  15949423 ggaaaacagggttggaagttacaaactgactcaaatagtttaacttctcgacttttcaaagccagatattacccgaatagcagctacttgaattcgaaat 15949522  T
Q  210 tgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||| ||||| ||||| ||||| |||||||| ||    ||||| || ||||| || || |||||| | ||||||||||||||    
T  15949523 tgggccataacccaagttttgtgtggcgtagtatccatagtgcgaaagtggtggtcaggcaaggtgctcgttggaaaattgg 15949604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 37 - 291
Target Start/End: Original strand, 15956803 - 15957058
Alignment:
Q  37 aaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa-agggttgaatactacaaac 135  Q
    |||||||||| || |||||||| ||||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||| ||||||| |   |||||||    
T  15956803 aaaagttatcagtacacaaaaatcatggaggtatgggtttcaaagatctggcagcctttaatgttgcaatgcttggaaaacagggttggaagttacaaac 15956902  T
Q  136 tgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttgg 235  Q
    ||| ||| ||||||||  |||   | |||| ||||||   |||||||| ||||| |||||| || | ||||| ||||| ||||| ||||| ||||| |||    
T  15956903 tgactcaaatagtttaacttctcaacttttcaaagccagatattacccgaatagaagctacttgaattcgaaattgggccataacccaagttttgtgtgg 15957002  T
Q  236 cgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    ||||| |||   ||||| || |||||||| || |||||| | ||||||||||||||    
T  15957003 cgtagtattcatagtgcgaaagtggttgtcaggcaaggtgctcgttggaaaattgg 15957058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 10514729 - 10515003
Alignment:
Q  18 ttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaa-- 115  Q
    ||||||||| |||| ||| ||||  |||  || ||||||||||||||||| |||| |||||||||||||  ||| |||||||| ||||||||||||||      
T  10514729 ttgcattggctatcctgggaaaatctatatgttcacaaaaaccatggaggaatgggtttcaaagatttgacagcatttaatgtggcaatgcttggaaaac 10514828  T
Q  116 aagggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggac 215  Q
    |||||| ||| |||||||||  |||| || ||  | || |||||||||||| ||||    || ||||| |||||||| || || ||  | || || ||||    
T  10514829 aagggtggaa-actacaaaccaattcggaaagccttgtctcaagaattttttaagctagatactacccgaatagtagttatctagatgctaaatttggac 10514927  T
Q  216 ataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||||||||| |||||||||| ||| ||| |||| ||||| ||||||||| |||||||  | ||||||||||||||    
T  10514928 ataatccaagttttgtttggcatagtattctcagcgccaaagtggttgttcgacaaggggctcgttggaaaattgg 10515003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 14107428 - 14107351
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  14107428 ccagtgcacatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaagccaaaa 14107351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 9633699 - 9633618
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||   || || ||||||||| |||||||||||||||||    
T  9633699 ttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaa 9633618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 12635850 - 12635931
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| ||||||||||||||||| ||  || ||||||||||||||| |||| || ||||||||| |||||||||||||||||    
T  12635850 ttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaaagccaaaa 12635931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 13036078 - 13035997
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| | ||||||||| ||| |||| || ||||||||| |||||||||||| ||||    
T  13036078 ttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaagcaaaaa 13035997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 21898684 - 21898765
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||  ||   ||||| ||||||||| |||||||||||||||||    
T  21898684 ttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaa 21898765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 291
Target Start/End: Original strand, 21697403 - 21697634
Alignment:
Q  61 atggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa-agggttgaatactacaaactgattcagatagtttagtttcaag 159  Q
    ||||||| |||| |||||||||| ||| |||||||||||| ||||||||||| ||| ||||||| |  || |||||| || |||||||  | || ||||     
T  21697403 atggaggcatgggtttcaaagatctggaagcttttaatgtggcaatgcttggtaaacagggttggaagctgcaaactaatacagatagccttgtctcaaa 21697502  T
Q  160 aatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtg 259  Q
    ||| ||||||||    || ||||| ||| |||  || || ||  | |||||||| |||||||| || ||||| |||||||| ||||||||||| ||||||    
T  21697503 aatctttaaagctagatactacccgaatggtaattatctagatgccaagttggggcataatccgagttttgtctggcgtagtattttcagtgctaaggtg 21697602  T
Q  260 gttgttagacaaggttcccgttggaaaattgg 291  Q
    || ||  |||||||  || | |||||||||||    
T  21697603 gtggtccgacaaggagccagatggaaaattgg 21697634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 5029852 - 5029934
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||  ||  | |||||||||  ||||||||||||||||    
T  5029852 tttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaagccaaaa 5029934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 30788928 - 30788846
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||  || ||| |||||||||||||||   || || ||||||||| |||||||||||||||||    
T  30788928 tttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaa 30788846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 5253297 - 5253216
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||   || || ||||||||| |||||||||||| ||||    
T  5253297 ttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaaa 5253216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 6606171 - 6606090
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||  ||||||||||| |||||| ||||||||||| |||  ||| || ||||||||| |||||||||||||||||    
T  6606171 ttggccagtgtacatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaa 6606090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 309 - 398
Target Start/End: Original strand, 10396508 - 10396597
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaa 398  Q
    ||||||||||||||||  |||||  ||||||||||||||||| |||||||||  ||||||||||| |||| ||||||  |||| ||||||    
T  10396508 tttggccagtgcgcatatctctatgcatgagtcggattagtcacccattattgataggtcggaaaccggtacgaaagaaaaaaaaataaa 10396597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 14783494 - 14783413
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| |||| |||||||||||| |||||| ||||||||||| |||  ||| || ||||||||| |||||||||||||||||    
T  14783494 ttggctagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaa 14783413  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 3601120 - 3601201
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| |||||| ||| ||||||||||| |||   || || ||||||||| |||||||||||| ||||    
T  3601120 ttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaaa 3601201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 29444839 - 29444758
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||||| | ||||  || || |||||||||   |||||||||||||||    
T  29444839 ttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaagccaaaa 29444758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 13391321 - 13391397
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||  ||| | ||||| ||| |||||| ||||    
T  13391321 tttggccagtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtgcaaaag 13391397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 17114959 - 17114887
Alignment:
Q  322 catgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataa 394  Q
    ||||||||||| |||||| |||||||||||||||   ||  |||||||||||||||||| | |||||||||||    
T  17114959 catgcctctacgcatgagccggattagtcgcccacctttgataggtcggaaatcggtgcaatagccaaaataa 17114887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 8888917 - 8888959
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  8888917 tttggccagtgcgcatacctctacgcatgagtcggattagtcg 8888959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 12606465 - 12606511
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||    
T  12606465 tttggccagtgcgcatgcctctacgcacgagccggattagtcgccca 12606511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 8932697 - 8932778
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| ||||||||||||||||| |||||| ||||||| || ||||   ||  | ||||||||| |||||||||||||||||    
T  8932697 ttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagccaaaa 8932778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 8944163 - 8944244
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| ||||||||||||||||| |||||| ||||||| || ||||   ||  | ||||||||| |||||||||||||||||    
T  8944163 ttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagccaaaa 8944244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 13468969 - 13469050
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||| ||||||||||| || ||| | |||||||||||||  ||| || ||| ||||| |||||||||||||||||    
T  13468969 ttggtcagtgcacatgcctctacgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgcgaaagccaaaa 13469050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 19089534 - 19089615
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| || ||| ||||||||||| | |   || || ||||||||| |||||||||||||||||    
T  19089534 ttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaagccaaaa 19089615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 29333214 - 29333138
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||||||||||||||||||||||| |||||| || || ||||| |||   || ||||||||| || |||||||||||    
T  29333214 tttggccagtgcgcatgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgcgaaag 29333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 11142638 - 11142729
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaat 400  Q
    |||| ||||||||||||||||||| |||||||| ||||||| | |||   || || ||||||| | |||||||||| |||||| || |||||    
T  11142638 tttgaccagtgcgcatgcctctacgcatgagtcagattagttgtccaactttggtgggtcggagaccggtgcgaaaaccaaaaaaaaaaaat 11142729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 375049 - 375008
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtc 350  Q
    |||||||||||||||||||||||  ||||||| |||||||||    
T  375049 tttggccagtgcgcatgcctctatgcatgagttggattagtc 375008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 8612044 - 8611967
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||| |||||| ||||| |||||  |||||||||||||||   || || |||| |||| |||||||||||||||||    
T  8612044 ccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaa 8611967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 14326045 - 14326110
Alignment:
Q  322 catgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagcc 387  Q
    ||||||||||| |||||| |||||||||||| |||  || || ||||||||| |||||| ||||||    
T  14326045 catgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgcaaaagcc 14326110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 14419055 - 14419120
Alignment:
Q  322 catgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagcc 387  Q
    ||||||||||| |||||| |||||||||||| |||  || || ||||||||| |||||| ||||||    
T  14419055 catgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgcaaaagcc 14419120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 30410485 - 30410562
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| ||||||  |||||| |||| |||  || || ||||||||| || ||||||||| ||||    
T  30410485 ccagtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcgaaagcaaaaa 30410562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 1e-61; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 64 - 291
Target Start/End: Original strand, 31290408 - 31290636
Alignment:
Q  64 gaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa-agggttgaatactacaaactgattcagatagtttagtttcaagaat 162  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||| |||| | ||||  | ||||||||||||| || | |||||||||||||||||    
T  31290408 gaggtatgggtttcaaagatttggcagcctttaatgttgcaatgcttgcaaaacatggttataaactacaaactgatacaaaaagtttagtttcaagaat 31290507  T
Q  163 ttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggtt 262  Q
    ||| ||||||| |||||||||||||||||||||  |||| ||||| |||||||||||||||||||||||||||| || |||||||||||| ||| |||||    
T  31290508 tttcaaagcccggtattaccctaatagtagctatatggattcgaaattgggacataatccaagctttgtttggcataacattttcagtgctaagatggtt 31290607  T
Q  263 gttagacaaggttcccgttggaaaattgg 291  Q
     ||||||||| | ||| ||||||||||||    
T  31290608 attagacaagttacccattggaaaattgg 31290636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 33 - 291
Target Start/End: Original strand, 8723261 - 8723520
Alignment:
Q  33 tggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa-agggttgaatactac 131  Q
    |||||||||||||| || ||||| ||||| |||||||||| |||||||||||||| ||||||||||||||| |||||||||||| | ||||| |  ||||    
T  8723261 tggaaaaagttatcagtacacaagaaccacggaggtatgggtttcaaagatttggcagcttttaatgttgctatgcttggaaaacaaggttggaagctac 8723360  T
Q  132 aaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgt 231  Q
    ||  ||| || |||||| | || ||||||||||||||||| | |||||| || ||||| |||||||| || || || || |||||||||||||| |||||    
T  8723361 aagttgagtcggatagtcttgtctcaagaatttttaaagctcggtattatccgaatagcagctacctagattctaaattaggacataatccaagttttgt 8723460  T
Q  232 ttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||||||||||| ||  |||| || ||||||||||| |||||| |||| |||||||||||    
T  8723461 ttggcgtagcatctttggtgcaaaagtggttgttaggcaaggtgcccgctggaaaattgg 8723520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 402
Target Start/End: Original strand, 9805037 - 9805129
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaataa 402  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||   || || |||||||||  |||||||||||||||| ||||||||||    
T  9805037 ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaagccaaaaaaataaaataa 9805129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 1538464 - 1538545
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||| ||| |||  ||| || ||||||||| |||||||||||||||||    
T  1538464 ttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaa 1538545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 4016329 - 4016248
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||||| ||| ||||||||| || ||  ||| || ||||||||| | |||||||||||||||    
T  4016329 ttggccagtgcgcatgcctctacacacgagccggattagttgctcaccattggtgggtcggaaaccagtgcgaaagccaaaa 4016248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 13066373 - 13066320
Alignment:
Q  63 ggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa 116  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  13066373 ggaggtatggatttcaaagatttggcagcatttaatgttgctatgcttggaaaa 13066320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 22295249 - 22295330
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| ||||||| |||||||||||  ||  || ||||||| ||||||| ||||||||| ||||    
T  22295249 ttggccagtgcgcatgcctctacgcatgagttggattagtcgcttatctttggtaggtcagaaatcgatgcgaaagcaaaaa 22295330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 39099853 - 39099772
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||   || || ||||||||| |||||| ||||||||||    
T  39099853 ttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaagccaaaa 39099772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 42861292 - 42861211
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||| ||| |||  ||| || ||||||| | |||||||||||||||||    
T  42861292 ttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaagccaaaa 42861211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 42086364 - 42086440
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaa 390  Q
    ||||||||||||||||||| |||||| ||||||||||| |||   || || ||||||||| ||||||||||||||||    
T  42086364 ccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagccaaa 42086440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 5731994 - 5731913
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||  ||||| | |||||||||  ||   ||||| ||||||||| |||||||||||||||||    
T  5731994 ttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaa 5731913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 9168327 - 9168246
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||| ||||||| |||||| ||||||||||| |||   ||||| ||||| |||||||||| ||||| ||||    
T  9168327 ttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaatcggtgcaaaagcaaaaa 9168246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 19572757 - 19572838
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||  ||  ||| || ||| ||||| | |||||||||||||||    
T  19572757 ttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaagccaaaa 19572838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 384
Target Start/End: Original strand, 20525874 - 20525945
Alignment:
Q  313 gccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    |||||||||||||||||||| |||||| ||||||||||| |||  ||| || | ||||||| ||||||||||    
T  20525874 gccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 7616964 - 7617034
Alignment:
Q  321 gcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| |||||||| ||||||||| |||||||| || | |||||||  ||||||||||| ||||    
T  7616964 gcatgcctctacgcatgagtcagattagtcgtccattattggtggatcggaaactggtgcgaaagcaaaaa 7617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 21375383 - 21375465
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| ||||  ||  | | ||||||| | |||||||||||||||    
T  21375383 tttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtgcgaaagccaaaa 21375465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 384
Target Start/End: Complemental strand, 35561888 - 35561818
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    |||||||||||||||||||||||||| | |||||||||| ||   || |||||||||||||| ||| ||||    
T  35561888 ccagtgcgcatgcctctacacatgagccagattagtcgctcaccgttggtaggtcggaaatcagtgtgaaa 35561818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 400
Target Start/End: Complemental strand, 38897793 - 38897703
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaat 400  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||   || || | ||||||| | ||||||||||||||| || |||||    
T  38897793 ttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgcgaaagccaaaaaaaaaaaat 38897703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 9812905 - 9812986
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||| ||||| |||||  |||||||||||||||   || || |||| |||| |||||||||||||||||    
T  9812905 ttggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaa 9812986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 12766164 - 12766245
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| |||||  | |||||||||||||   || || |||| |||| |||||||||||||||||    
T  12766164 ttggccagtgtgcatgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaa 12766245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 351
Target Start/End: Original strand, 20255406 - 20255443
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20255406 ccagtgcgcatgcctctacgcatgagtcggattagtcg 20255443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 20682691 - 20682610
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| ||||||| ||| |||   ||||| ||| ||||| |||||||||||| ||||    
T  20682691 ttggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaagcaaaaa 20682610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 35813068 - 35813031
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    |||||||||||| |||||||||||||||||||||||||    
T  35813068 ccagtgcgcatgtctctacacatgagtcggattagtcg 35813031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 43399161 - 43399242
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || |||  |||||||||| |||   || || ||||||||| |||||||||||| ||||    
T  43399161 ttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaagcaaaaa 43399242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 8513552 - 8513640
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaa 398  Q
    ||||||||||| ||||||||||| || ||| | ||||||||| |||   || || ||||||||| |||||||||||| |||| ||||||    
T  8513552 ttggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaataaa 8513640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 40773315 - 40773387
Alignment:
Q  319 gcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||| | |||||||||||||||  |||  || ||  |||||||| |||||||||||||||||    
T  40773315 gcgcatgcctctacatacgagtcggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaagccaaaa 40773387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 349
Target Start/End: Original strand, 38369732 - 38369771
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagt 349  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  38369732 ttggccagtgcgcatgcctctacgcacgagtcggattagt 38369771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 14974399 - 14974357
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    |||||||||||| ||||||||||| |||||| |||||||||||    
T  14974399 tttggccagtgcacatgcctctacgcatgagccggattagtcg 14974357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 20228750 - 20228796
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccat 356  Q
    ||||| |||||| ||||||||||||| ||||| ||||||||||||||    
T  20228750 ttggctagtgcgtatgcctctacacacgagtcagattagtcgcccat 20228796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 25452957 - 25453038
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||| |||||||||||| || ||| ||||||||||||| | | ||||| ||||| ||| |||||| ||||||||||    
T  25452957 tttgaccagtgtgcatgcctctacgcacgagccggattagtcgccaact-ttagtcggtcgaaaaccggtgcaaaagccaaaa 25453038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 41163535 - 41163453
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| |||| |||||| ||||||  |||||||||| |||   || || |||||||||  ||||||||||||||||    
T  41163535 tttggccagtgcacatgtctctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaagccaaaa 41163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 12705051 - 12705128
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||| |||||| ||||| |||||  |||||||||||||||   || || |||| |||| |||||||||||||||||    
T  12705051 ccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaa 12705128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 14588687 - 14588650
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  14588687 ccagtgcgcatgcctctacgcatgagccggattagtcg 14588650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 18262688 - 18262647
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||| |||||||||| ||| |||||||||||||||    
T  18262688 ccagtgcgcatacctctacacacgagccggattagtcgccca 18262647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 19839365 - 19839434
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    ||||||||||||||||||| | ||||| ||||||||||| |   |||||  ||||||||||| |||||||    
T  19839365 cagtgcgcatgcctctacatacgagtcagattagtcgcctacctttagtgagtcggaaatcgatgcgaaa 19839434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 20590032 - 20590113
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||| |||||| |||||| || |||||| | ||| |||| |  | ||||||| ||||||| |||||||||    
T  20590032 ttggccagtgcgcatgactctacgcatgagccgtattagttgtccactattggaggatcggaaaccggtgcggaagccaaaa 20590113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 23383690 - 23383771
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||| ||||||||| ||||||  |||||||||| |||   || || |||||||||  ||||||||||| ||||    
T  23383690 ttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaagctaaaa 23383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 24463960 - 24463915
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||||||||||||  || ||| |||||||||||||||    
T  24463960 ttggccagtgcgcatgcctctatgcacgagccggattagtcgccca 24463915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 40117448 - 40117485
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggatta 347  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  40117448 ttggccagtgcgcatgcctctacgcatgagccggatta 40117485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 2485231 - 2485271
Alignment:
Q  312 ggccagtgcgcatgcctctacacatgagtcggattagtcgc 352  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  2485231 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgc 2485271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 6764532 - 6764488
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcc 353  Q
    |||||| ||||||||||||||||| || ||| |||||||||||||    
T  6764532 tttggctagtgcgcatgcctctacgcacgagccggattagtcgcc 6764488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 39728420 - 39728504
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataa 394  Q
    |||||||||| |||||||||||| |  |||||| ||||||||| ||   ||  || |||||||| |||||| |||||||||||||    
T  39728420 ttggccagtgtgcatgcctctacgctcgagtcgaattagtcgctcacctttgatacgtcggaaaccggtgcaaaagccaaaataa 39728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 7e-60; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 11 - 291
Target Start/End: Original strand, 7993711 - 7993991
Alignment:
Q  11 caaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgctt 110  Q
    ||||||| |||||||| |||||||  ||||||||||    || |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  7993711 caaagggatgcattggctatcttgagaaaagttatcaccacataaaaaccatggaggtatgggcttcaaagatttggtagcatttaatgttgcaatgctt 7993810  T
Q  111 ggaaaa-agggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagt 209  Q
    |||||  ||||||| | | ||||||||||||| || |||||||| |||| |||||||||||| |  |||||||  |||||||| ||||| || || || |    
T  7993811 ggaaatcagggttggaaattacaaactgattcgga-agtttagtctcaataatttttaaagctcgatattacctgaatagtagttacctagaatctaaat 7993909  T
Q  210 tgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||| || | |||||||||||    
T  7993910 tggctcataatccaagctttatttggcgtagcattttcagtgctaaggtggttgttaggcaaggtgcctgctggaaaattgg 7993991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 10927642 - 10927723
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||  ||   ||||| ||||||||| || ||||||||||||||    
T  10927642 ttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagccaaaa 10927723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 14846611 - 14846692
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||||||||||||||| |||||||| ||| ||||| |||   || || |||||||||||||||||||||||||||    
T  14846611 ttggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaagccaaaa 14846692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 43032937 - 43033018
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||   || || |||| |||| |||||||||||| ||||    
T  43032937 ttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcaaaaa 43033018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 39969983 - 39969908
Alignment:
Q  316 agtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||||| |||||||||||||| |||  | | ||||||| || ||||||||| ||||    
T  39969983 agtgcgcatgcctctacacatgagtcagattagtcgcccatcattgatggatcggaaaccgatgcgaaagcaaaaa 39969908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 583852 - 583893
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  583852 ccagtgcgcatgcctctacgcatgagtcggattagtcgccca 583893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 2467192 - 2467111
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||| |||||  |||||| ||||||||||| |||  ||| ||  |||||||| |||||||||||||||||    
T  2467192 ttggccagtgcgcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaagccaaaa 2467111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 3379881 - 3379812
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    ||||||||| |||||||  |||||||||||||||||| ||| | || || ||||||||||||||||||||    
T  3379881 cagtgcgcacgcctctatgcatgagtcggattagtcgtccacttttggtgggtcggaaatcggtgcgaaa 3379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 3418587 - 3418506
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||| ||||| |||||||| ||||||||| |||   ||||| |||| |||| |||||||||||| ||||    
T  3418587 ttggccagtgcgcatgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaagcaaaaa 3418506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 15884630 - 15884549
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| ||||||||||||||||| || ||| |||||||||||||||   || || ||||||||| |||||||||| ||||||    
T  15884630 ttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaaaccaaaa 15884549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 384
Target Start/End: Complemental strand, 4479370 - 4479296
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    ||||||||||||||||||||||| ||||||  |||||||||| |||   || || ||||||||| ||||||||||    
T  4479370 ttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 13831089 - 13831007
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||| ||||||||||||||||||| ||||||||||||| |||||  || |||||| ||||| || |  |||||||||||    
T  13831089 tttgaccaatgcgcatgcctctacacataagtcggattagtcacccatctttggtaggttggaaaccgttatgaaagccaaaa 13831007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 33935809 - 33935767
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgc 352  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  33935809 ttggccagtgcgcatgcctatacgcatgagtcggattagtcgc 33935767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 6100508 - 6100589
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||| |||| |||||| |||||||||||  ||   ||||| ||||| ||| || ||||||||||||||    
T  6100508 ttggccagtgcgcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaagccaaaa 6100589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 399
Target Start/End: Complemental strand, 9860069 - 9859980
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaa 399  Q
    |||||||||| ||||||||||||||||||| | ||||||||| |||  ||| || | ||||||| || ||| ||||| |||| |||||||    
T  9860069 ttggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattggtggatcggaaaccgatgcaaaagcaaaaaaaataaaa 9859980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 33401869 - 33401828
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  33401869 ccagtgtgcatgcctctacgcatgagtcggattagtcgccca 33401828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 45521209 - 45521285
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||| |||||| |||||||||||| ||   ||  | ||||||||| |||||||||||| ||||    
T  45521209 cagtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaagcaaaaa 45521285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 1653904 - 1653853
Alignment:
Q  340 tcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| |||||||| || ||||||||| ||||||||||| |||||    
T  1653904 tcggattagtcgtccattattggtgggtcggaaaccggtgcgaaagacaaaa 1653853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 1742280 - 1742229
Alignment:
Q  340 tcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| |||||||| || ||||||||| ||||||||||| |||||    
T  1742280 tcggattagtcgtccattattggtgggtcggaaaccggtgcgaaagacaaaa 1742229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 8803096 - 8803171
Alignment:
Q  316 agtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||  ||||||| || ||| |||||||||||||||| | | || ||||||||| || ||||||||||||||    
T  8803096 agtgcgcagacctctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaagccaaaa 8803171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 28163434 - 28163383
Alignment:
Q  61 atggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttgg 112  Q
    ||||||| ||||  ||||||||||||| |||||||||||| |||||||||||    
T  28163434 atggagggatgggattcaaagatttggcagcttttaatgtggcaatgcttgg 28163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 2964112 - 2964193
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||| || |||||||||||| || ||  |||||||||||||||   || || |||| |||| |||||||||||||||||    
T  2964112 ttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaa 2964193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 6042857 - 6042902
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    |||||||||||||||||||  || |||||| |||||||||||||||    
T  6042857 ttggccagtgcgcatgcctaaacgcatgagccggattagtcgccca 6042902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 11109083 - 11109046
Alignment:
Q  209 ttgggacataatccaagctttgtttggcgtagcatttt 246  Q
    |||||||||||||| || ||||||||||||||||||||    
T  11109083 ttgggacataatcctagttttgtttggcgtagcatttt 11109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 14666145 - 14666068
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagcc 387  Q
    ||||||||||||||||||||||| ||  || | |||||||||||||   || || ||||| ||| |||||||||||||    
T  14666145 ttggccagtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaagcc 14666068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 351
Target Start/End: Original strand, 18374050 - 18374087
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  18374050 ccagtgcgcatgcctctacgcatgagccggattagtcg 18374087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 43027349 - 43027422
Alignment:
Q  318 tgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||| |||||| ||||||||||| ||||  ||  | ||||||||| || ||||||||| ||||    
T  43027349 tgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaagcaaaaa 43027422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 308 - 400
Target Start/End: Original strand, 993222 - 993314
Alignment:
Q  308 ctttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaat 400  Q
    |||||| || |||||||| ||||||  |||||| |||||||||| |||   || || | || |||||||||||||||||||||| || |||||    
T  993222 ctttggacaatgcgcatgtctctacgtatgagttggattagtcgtccacctttggtggttcagaaatcggtgcgaaagccaaaaaaaaaaaat 993314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 394
Target Start/End: Original strand, 17981481 - 17981561
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataa 394  Q
    |||||| |||||||||||| || |||||| |||||| |||||   || ||  |||||||| |||||||||||| |||||||    
T  17981481 ccagtgtgcatgcctctacgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaagcaaaaataa 17981561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 2e-54; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 12 - 291
Target Start/End: Complemental strand, 13906933 - 13906653
Alignment:
Q  12 aaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgctt- 110  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||  ||| |||||||| ||||||||| |||||| | ||||||||||||||||||     
T  13906933 aaaggttttcattggttatcttgggaaaagttatcggtgcacaaaaattatgaaggtatgggtttcaaagacttggtaacctttaatgttgcaatgcttg 13906834  T
Q  111 ggaaaaagggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagtt 210  Q
    ||||| ||||||| | ||||||||||| |||| | | || |||||||||||| || ||||||  |||||| || ||||| |||| | |||| | ||| ||    
T  13906833 ggaaacagggttggaaactacaaactggttcaaacaattaagtttcaagaatcttcaaagcctggtattatccgaatagcagcttcttggaattgaaatt 13906734  T
Q  211 gggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    ||| ||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || |||||| ||  ||||||||||||    
T  13906733 gggccataacccaagttttgtttggcgtagtattttcagtgctaaggtagttgtcaggcaaggtgccaattggaaaattgg 13906653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 7246720 - 7246645
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||   || || ||||||||| |||||||||||    
T  7246720 ttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 400
Target Start/End: Original strand, 29895824 - 29895914
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaat 400  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||  ||| || | ||||||| ||||||||||| ||||| || |||||    
T  29895824 ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaaggcaaaaaaaaaaaat 29895914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 16645155 - 16645236
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||    | || ||||||||| |||||||||||| ||||    
T  16645155 ttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcgaaagcaaaaa 16645236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 49260739 - 49260658
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| ||||||||||| |||   || || |||||||||||||||| ||||||||||    
T  49260739 ttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgcaaaagccaaaa 49260658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 14124052 - 14124128
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||  ||| || ||| ||||| |||||||||||    
T  14124052 tttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 38166064 - 38166148
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataa 394  Q
    |||||||||||||||| |||||| || ||| |||||||||||||||   || || ||||||||| |||||||||||| |||||||    
T  38166064 ttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaaataa 38166148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 391
Target Start/End: Complemental strand, 48834772 - 48834693
Alignment:
Q  312 ggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |   || || ||||||||| |||||||||||| ||||    
T  48834772 ggccagtgcacatgcctctatacatgagtcggattagtcgcctacctttggtgggtcggaaaccggtgcgaaagcaaaaa 48834693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 403
Target Start/End: Original strand, 14567275 - 14567369
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaataat 403  Q
    |||||||||||||||||||||||| || ||| |||||||||||| |    || || |||||||||||||||||||||  |||||||  |||||||    
T  14567275 tttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaaaaaataaataaataat 14567369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 35359772 - 35359850
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagcc 387  Q
    |||| |||||||||||||||| || ||| ||| |||||||||||||| |||  || ||||||||| |||||||||||||    
T  35359772 tttgaccagtgcgcatgcctcaacgcataagttggattagtcgcccactataggtgggtcggaaaccggtgcgaaagcc 35359850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 53599096 - 53599178
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||| |||||| ||||||| |||  ||   ||||| | ||||||| |||||||||||||||||    
T  53599096 tttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttagtggatcggaaaccggtgcgaaagccaaaa 53599178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 354
Target Start/End: Complemental strand, 15840010 - 15839965
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgccc 354  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  15840010 tttggccagtgcgcatgcctctacgcatgagccggattagtcgccc 15839965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 16450337 - 16450418
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||| ||||||||||| |||||| | ||||||||| |||   || |||||||||||| |||||||||||| ||||    
T  16450337 ttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaagcaaaaa 16450418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 38168294 - 38168382
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaa 399  Q
    ||||||||||| ||||||||||| |||||| |||||||||||  ||   ||||| ||| ||||| ||||||||||||||||| |||||||    
T  38168294 ttggccagtgc-catgcctctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgcgaaagccaaaaaaataaaa 38168382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 42722651 - 42722570
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||  ||   ||||| ||||| ||| ||||||||||| |||||    
T  42722651 ttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaagtcaaaa 42722570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 50485980 - 50486061
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||  ||||||||||||| || ||| |||||||||||||||  |||||| ||||||||| || ||| ||||||||||    
T  50485980 ttggccagaacgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaaccgatgcaaaagccaaaa 50486061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 54946285 - 54946349
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaa 373  Q
    ||||| |||| ||||||||||||| |||||| |||||||||||||||| ||| || |||||||||    
T  54946285 tttggtcagtccgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaa 54946349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 8064868 - 8064797
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||| |||||| ||||||||||| |||  |||| ||||||| ||| |||||| ||||    
T  8064868 ccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccggtgcaaaag 8064797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 21192679 - 21192758
Alignment:
Q  312 ggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||| || ||||||||||| |||||||   || ||  |||| ||| |||||||||||||||||    
T  21192679 ggccagtgcgcatgcctctacgcacgagtcggattaatcgcccacatttggtgagtcgaaaaccggtgcgaaagccaaaa 21192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 38841431 - 38841352
Alignment:
Q  321 gcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaat 400  Q
    ||||| |||||| |||||||||||||||||| ||||  || |||| |||||||||| ||||||||| |||| || |||||    
T  38841431 gcatgtctctacgcatgagtcggattagtcgtccatctttggtagttcggaaatcgatgcgaaagctaaaaaaaaaaaat 38841352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 3574520 - 3574478
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgc 352  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  3574520 ttggccagtgcgcatgcctctacgcacgagtcggattagtcgc 3574478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 17080080 - 17080122
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgc 352  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  17080080 ttggccagtgcgcatgcctctacgcatgagccggattagtcgc 17080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 20354674 - 20354724
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattatt 360  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  20354674 ttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccactatt 20354724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 384
Target Start/End: Complemental strand, 40780935 - 40780861
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    |||| |||||||||||||||||| |||||| ||||||||||| |||   || || ||||||||| ||||||||||    
T  40780935 ttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 1446863 - 1446904
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  1446863 ttggccagtgcgcatgcctctacgcatgagccggattagtcg 1446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 3159543 - 3159462
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| | |||||||||| ||  ||| || ||||||||| |||||| ||||| ||||    
T  3159543 ttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgcaaaagcaaaaa 3159462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 5472922 - 5472877
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||    
T  5472922 ttggccagtgcgcatgcctctacgcacgagccggattagtcgccca 5472877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 20421810 - 20421891
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| | ||||| ||| |||| |||  | ||||||||| | || ||||||||||||    
T  20421810 ttggccagtgcgcatgcctctacgcatgagccagattaatcgtccatcattgatgggtcggaaaccagttcgaaagccaaaa 20421891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 20532483 - 20532438
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||||    
T  20532483 ttggccagtgcgcatgcctctacgcatgagccggataagtcgccca 20532438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 36262841 - 36262796
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||    
T  36262841 ttggccagtgcacatgcctctacgcacgagtcggattagtcgccca 36262796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 47078495 - 47078576
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||| ||||||||||| || ||| |||||||||||| ||  ||| || ||||||||| | |||||||||| ||||    
T  47078495 ttggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaagcaaaaa 47078576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 402
Target Start/End: Original strand, 8889059 - 8889150
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaataa 402  Q
    |||| ||||||||||| |||||| |||||| ||||||||||| |||   || || ||||||||| |||||  |||||||||| ||||||||||    
T  8889059 ttgggcagtgcgcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgtaaaagccaaaa-aataaaataa 8889150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 36145284 - 36145248
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36145284 cagtgcgcatgcctctacacatgagccggattagtcg 36145248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 31588723 - 31588798
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||||||||||||||| |||||| |||||| |||||||||||| || | || || | ||||||| || ||||||||    
T  31588723 ttggccagtgcgcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaaccgatgcgaaag 31588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 42722449 - 42722378
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||| ||||||  |||||||||||||||||| |||  | | || ||||| |||||||||||||||    
T  42722449 ccagtgcgcatacctctatgcatgagtcggattagtcgtccaccaatggtgggtcgaaaatcggtgcgaaag 42722378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 4738658 - 4738736
Alignment:
Q  313 gccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||| |||||| ||||||  | |||||||| |||   || || ||||||||| |||||||||||||||||    
T  4738658 gccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaagccaaaa 4738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 37369117 - 37369035
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||| |||||||||||| || ||||||||| ||||||||| |||| ||   ||||||| || |||||||| |||||    
T  37369117 tttgtccagtgtgcatgcctctacgcacgagtcggataagtcgcccactattggtgaatcggaaaccgatgcgaaagtcaaaa 37369035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 47682457 - 47682375
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| |||| |||||| || ||| ||| |||||||||||   || || ||||||||| |||||||||||| ||||    
T  47682457 tttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaaa 47682375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 20128346 - 20128427
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| ||| || |||   ||||||||| |||  ||| || |||| |||| |||||||||||||||||    
T  20128346 ttggccagtgcgcatgcctttacgcacgagctagattagtcgtccaccattggtgggtcagaaaccggtgcgaaagccaaaa 20128427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 25103824 - 25103783
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtc 350  Q
    |||| ||||||||||||||||||| ||||||| |||||||||    
T  25103824 tttgaccagtgcgcatgcctctacgcatgagttggattagtc 25103783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 29588773 - 29588854
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| ||||||||||||||||| || ||| |||||||||   |||  ||| || |||||||||||| ||||||||| ||||    
T  29588773 ttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaatcgatgcgaaagctaaaa 29588854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 40272405 - 40272364
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||    
T  40272405 ttggccagtgcgcatgcctctacgcataagtcggatttgtcg 40272364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 48015147 - 48015066
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||| |||||||| || ||| ||||||||| ||||| | ||  | | ||||||| |||||||||||| ||||    
T  48015147 ttggccagtgcgcaagcctctacgcacgagccggattagtagcccaattttgatggatcggaaaccggtgcgaaagcaaaaa 48015066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 52950119 - 52950200
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||| ||||||||||||  | ||||||||| |||   || || ||||||||| || ||||||||| ||||    
T  52950119 ttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaagcaaaaa 52950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 55921071 - 55921152
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||||||||||||||||  ||||| ||||||| |||| ||   || || ||||||||| |||||||||||| ||||    
T  55921071 ttggtcagtgcgcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaaa 55921152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 351
Target Start/End: Original strand, 6779249 - 6779289
Alignment:
Q  311 tggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  6779249 tggccagtgcgcatgcctctatgcatgagccggattagtcg 6779289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 398
Target Start/End: Original strand, 17946530 - 17946614
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaa 398  Q
    ||||||||||||| |||||||||||||| ||||||| | ||| | || ||  |||| ||| || ||||||||| |||| ||||||    
T  17946530 ccagtgcgcatgcttctacacatgagtcagattagttgtccacttttggtgagtcgaaaaccgttgcgaaagctaaaaaaataaa 17946614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 37 - 291
Target Start/End: Original strand, 15788598 - 15788853
Alignment:
Q  37 aaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa-agggttgaatactacaaac 135  Q
    |||||||||| || ||||| ||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||| |  ||||||      
T  15788598 aaaagttatcagtacacaagaaccacggaggtatgggtttcaaagatttggtagcttttaatgttgctatgcttggaaaacaaggttggaagctacaagt 15788697  T
Q  136 tgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttgg 235  Q
    ||| || |||||| | || ||||||||||||||||| | |||||| |  ||||| |||||||| || || || || |||||||||||||| |||||||||    
T  15788698 tgagtcggatagtcttgtctcaagaatttttaaagctcggtattatctgaatagcagctacctagattctaaattaggacataatccaagttttgtttgg 15788797  T
Q  236 cgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||||||| ||  |||| || ||||||||||| |||||| |||| |||||||||||    
T  15788798 cgtagcatctttggtgcaaaagtggttgttaggcaaggtgcccgctggaaaattgg 15788853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 6462444 - 6462525
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||| ||||| |||||||||| ||||||    
T  6462444 ttggccagtgcgcatgcctctacgcatgagccggattagtcgaccattattagtgggttggaaaccggtgcgaaaaccaaaa 6462525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 310 - 401
Target Start/End: Complemental strand, 3136769 - 3136678
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaata 401  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||   || || ||||||||| ||||||||||||||||| || ||||||    
T  3136769 ttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaagccaaaaaaaaaaaata 3136678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 26207872 - 26207795
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||| |||||||||||| |||||| ||||||||||| ||||||||||| ||||||||| |||||||| | ||||||    
T  26207872 ccagtgtgcatgcctctacgcatgagccggattagtcggccattattagtgggtcggaaaccggtgcgacaaccaaaa 26207795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 49021274 - 49021197
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| |||||| ||||||||||| |||  ||| || ||||||||| |||||||||||||||||    
T  49021274 ccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaa 49021197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 25294992 - 25295080
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaa 398  Q
    ||||||||||||||||||||||  |||||| ||||||||||| |||  ||| || ||| ||||| ||||||||||||||||| ||||||    
T  25294992 ttggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaagccaaaaaaataaa 25295080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 14505458 - 14505235
Alignment:
Q  51 cacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa--agggttgaatactacaaactgattcagatagt 148  Q
    ||||||||  ||||||||||||  ||||| ||||||| |||||||||||| || |||||||| |||  | ||| | | | |||||||| |||||||||||    
T  14505458 cacaaaaatgatggaggtatgggcttcaaggatttggcagcttttaatgtggctatgcttggcaaacaaaggtggca-attacaaactaattcagatagt 14505360  T
Q  149 ttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttggcgtagcattttca 248  Q
     | || |||| || ||| |||||    || ||||| || |||||||| || ||  | ||  ||||||||||||| || ||||||||||| |||||| |||    
T  14505359 cttgtctcaaaaaatttcaaagctagatactacccaaacagtagctatctagatgctaaactgggacataatcctagttttgtttggcgaagcattctca 14505260  T
Q  249 gtgccaaggtggttgttagacaagg 273  Q
    | |||||||||||  ||||||||||    
T  14505259 gcgccaaggtggtgattagacaagg 14505235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 29127951 - 29128032
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||   || || ||||||||| || ||||||||||||||    
T  29127951 ttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagccaaaa 29128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 41630583 - 41630506
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||||| |||||||||||||||   || || |||||||||  |||| |||||||||||    
T  41630583 ccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtgtgaaagccaaaa 41630506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 47749180 - 47749099
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| || ||||||||||||   || |||||||||||| || ||||||||||||||    
T  47749180 ttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaagccaaaa 47749099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 54237480 - 54237561
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||||||||| |||||| |||||| ||||| ||||| |||  |||||| ||||||||| |||||||||||||||||    
T  54237480 ttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaagccaaaa 54237561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 54261258 - 54261339
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||  ||   ||||| ||||||||| ||||||||||| |||||    
T  54261258 ttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagtcaaaa 54261339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 35315988 - 35316063
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||| | || || ||||||||| || ||||||||    
T  35315988 ttggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaag 35316063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 314 - 380
Target Start/End: Complemental strand, 50405674 - 50405608
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgc 380  Q
    ||||||||||||||||||| || |||||||||||||||||||  ||| || ||||||||| ||||||    
T  50405674 ccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 8164585 - 8164666
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||   || || | ||||||||||| | |||||||||||    
T  8164585 ttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaatcggcgtgaaagccaaaa 8164666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 15320218 - 15320299
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| || ||| |||||||||||||||   || || |||| |||| |||||||||||||||||    
T  15320218 ttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaa 15320299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 24506719 - 24506642
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||| ||||||||||| |||||||| |||||||||| ||  ||| || ||||||||| |||||| ||||||||||    
T  24506719 ccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtgcaaaagccaaaa 24506642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 28572286 - 28572205
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||  |||||||||||| || ||| |||||||||||||||   || || ||||||||| |||||||||||||||||    
T  28572286 ttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaa 28572205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 29135945 - 29136026
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||||||  |||  ||| || ||| ||||| |||| ||||||||||||    
T  29135945 ttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccattggtgggttggaaaccggtacgaaagccaaaa 29136026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 34374517 - 34374436
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||||||||||||| || ||| ||||||||||||||||| |  || || ||||||||| ||||| |||||||||||    
T  34374517 ttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaaccggtgtgaaagccaaaa 34374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 51060356 - 51060275
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||||||||||||||| |||||   |||||||||| |||  ||| || ||||||||| |||||||||||||||||    
T  51060356 ttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaa 51060275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 390
Target Start/End: Original strand, 47219176 - 47219256
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaa 390  Q
    ||||| ||||||||||||||||| |||||| ||||||||||| |||   ||  | ||||||||| ||||||||||||||||    
T  47219176 ttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagccaaa 47219256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 3507608 - 3507529
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaa 389  Q
    ||||||||||||||||||||||| || ||| |||||||||||| ||   || || ||||||||| |||||||||| ||||    
T  3507608 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaaaccaa 3507529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 29762230 - 29762155
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||  ||||||  |||||||||| |||  ||| || ||||||||| |||||||||||    
T  29762230 ttggccagtgcgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 26043844 - 26043886
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgc 352  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  26043844 ttggccagtgcgcatgcctctacgcatgagccggattagtcgc 26043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 2668093 - 2668174
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || |||  ||||||||||| ||   ||||| ||| ||||||| |||||||||| ||||    
T  2668093 ttggccagtgcgcatgcctctacgcaagagctggattagtcgctcacctttagtgggttggaaatcagtgcgaaagcaaaaa 2668174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 7328876 - 7328956
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||   || || ||||| ||| |||||||||||| ||||    
T  7328876 ttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaagctaaaa 7328956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 13893966 - 13894039
Alignment:
Q  318 tgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||| ||| |||||||||||||||   || || | ||| ||| |||||||||||||||||    
T  13893966 tgcgcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaagccaaaa 13894039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 39849103 - 39849148
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||    
T  39849103 ttggccagtgtgcatgcctctacgcatgagccggattagtcgccca 39849148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 49198383 - 49198424
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  49198383 ttggccagtgcgcatgcctctacgcatgagccggattagtcg 49198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 2030477 - 2030553
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||| ||||| ||||||||| ||||||||||||| |||| ||||| || | |||| ||||| |||||| ||||||||    
T  2030477 tttgaccagttcgcatgcctttacacatgagtcgaattaatcgcctatcagtagtgggtcgaaaatcgatgcgaaag 2030553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 26923331 - 26923255
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| | |||||| ||||||||||| | | |||||||| || |||| |||| |||||||||||| ||||    
T  26923331 cagtgcgcatgcatatacacacgagtcggattaattgtccattattggtgggtcagaaaccggtgcgaaagcaaaaa 26923255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 45877486 - 45877570
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataa 394  Q
    ||||||||||| ||||||||||| |||||| |||||||||||  ||  |||  | ||||||||| |||||||||||  |||||||    
T  45877486 ttggccagtgcacatgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaagttaaaataa 45877570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 7310767 - 7310697
Alignment:
Q  321 gcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| || ||| |||||||||||| |||  || || ||||||||| || ||||||||||||||    
T  7310767 gcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaagccaaaa 7310697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 347
Target Start/End: Original strand, 23511598 - 23511636
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggatta 347  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  23511598 tttgaccagtgcgcatgcctctacgcatgagtcggatta 23511636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 33251693 - 33251735
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||| |||||||||||| |||||| |||||||||||    
T  33251693 tttggccagtgtgcatgcctctacgcatgagccggattagtcg 33251735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 50753405 - 50753335
Alignment:
Q  321 gcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| || |||||||||||||||  ||| ||| || ||||||||| |||||| ||||| ||||    
T  50753405 gcatgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgcaaaagcaaaaa 50753335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 314 - 384
Target Start/End: Complemental strand, 51683025 - 51682955
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    ||||||||||||||||| |||| ||| |||||||||||||||  | | || ||||||||| | ||||||||    
T  51683025 ccagtgcgcatgcctctccacacgagccggattagtcgcccaccaatggtgggtcggaaaccagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 30767322 - 30767277
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    |||||||||| |||||||||||| || ||| |||||||||||||||    
T  30767322 ttggccagtgtgcatgcctctacgcacgagccggattagtcgccca 30767277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 43330803 - 43330762
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  43330803 ccagtgcgcatgcctctacgcacgagccggattagtcgccca 43330762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 44064584 - 44064657
Alignment:
Q  318 tgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||| |||||  |||||||||||| ||   || || ||||||||| |||||| ||||||||||    
T  44064584 tgcgcatgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaagccaaaa 44064657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 47303564 - 47303523
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    |||| |||||| |||||||||||||||||| |||||||||||    
T  47303564 ttggtcagtgcacatgcctctacacatgagccggattagtcg 47303523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 48342052 - 48342141
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaa 399  Q
    ||||| ||||||||||||||||| |||||  | ||||||||| ||||  || || | |||||||  ||||||||||| |||| |||||||    
T  48342052 ttggctagtgcgcatgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaaacaggtgcgaaagcaaaaaaaataaaa 48342141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 397
Target Start/End: Original strand, 8362608 - 8362696
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataa 397  Q
    |||||||||| ||||||||||||| |||||| |  |||||||| |||   ||||| | || |||| ||||||||| ||||||| |||||    
T  8362608 tttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaaccggtgcgaatgccaaaaaaataa 8362696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 11687184 - 11687144
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtc 350  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  11687184 ttggccagtgcgcatgcctctacgtatgagtcagattagtc 11687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 28242309 - 28242361
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattatta 361  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| || |||||    
T  28242309 tttggccagtgcacatgcctctatgcatgaggcggattagtcgcacactatta 28242361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 35998641 - 35998565
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||| ||||||||||| || |||| |||||| ||| |||   ||||| |||| |||| |||||||||||||||||    
T  35998641 cagtgcacatgcctctacgcacgagttggattaatcgtccacctttagtgggtcagaaaccggtgcgaaagccaaaa 35998565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 9e-41; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 11 - 291
Target Start/End: Complemental strand, 26420331 - 26420050
Alignment:
Q  11 caaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgctt 110  Q
    |||||| |||| ||||||||| ||| |||||||||| || |||||||| ||||||||||||| |||||||||| ||| ||| ||||||||||||||||||    
T  26420331 caaaggcttgcgttggttatcctgggaaaagttatcagtacacaaaaatcatggaggtatgggtttcaaagatctggcagcctttaatgttgcaatgctt 26420232  T
Q  111 ggaaaa-agggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagt 209  Q
    |||||| ||||||| |   |||||||||| ||| ||||||||  |||   | |||| ||||||   |||||||| ||||| |||||| || | ||||| |    
T  26420231 ggaaaacagggttggaagttacaaactgactcaaatagtttaacttctctacttttcaaagccagatattacccgaatagcagctacttgaattcgaaat 26420132  T
Q  210 tgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||| ||||| ||||| ||||| |||||||| |||   ||||| || |||||||| || |||||| | ||||||||||||||    
T  26420131 tgggccataacccaagttttgtgtggcgtagtattcatagtgctaaagtggttgtcaggcaaggtgctcgttggaaaattgg 26420050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 2981006 - 2980925
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| || ||||||||||||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  2981006 ttggccagtgtgcatgcctctacgcacgagtcggattagtcgtccatgtttagtgggtcggaaatcggtgcgaaagcaaaaa 2980925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 49078147 - 49078228
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||  ||  ||| |||||||||||| |||||||||||||||||    
T  49078147 ttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaagccaaaa 49078228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 50094936 - 50095026
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaa 399  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||| |||  |||||| ||||||||| |||||| |||||||||| |||||||    
T  50094936 tttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgcaaaagccaaaaaaataaaa 50095026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 10422821 - 10422910
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaa 399  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||   || ||| |||||||| |||||||||||| |||| |||||||    
T  10422821 ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaagcaaaaaaaataaaa 10422910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 43959896 - 43959815
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||   ||||| | ||||||| |||||||||||||||||    
T  43959896 ttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagccaaaa 43959815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 45 - 288
Target Start/End: Complemental strand, 25596317 - 25596073
Alignment:
Q  45 tcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa-agggttgaatactacaaactgattcag 143  Q
    ||||| ||||||||  ||||||| ||||||||||| ||||||| ||| |||||||| || |||||||| ||| | |||||   |||||||||| || | |    
T  25596317 tcggttcacaaaaaggatggaggaatggatttcaaggatttggcagcatttaatgtggcgatgcttggtaaacaaggttggcaactacaaactaatccgg 25596218  T
Q  144 atagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttggcgtagcat 243  Q
    ||||| | || |||| |||||| |||||    |||||||| ||||| |  || ||  |  | |||||||| ||||| || || ||||||||||| |||||    
T  25596217 atagtcttgtctcaaaaattttcaaagctagatattacccaaatagcaattatctaaatgctaagttgggtcataaccctagttttgtttggcgaagcat 25596118  T
Q  244 tttcagtgccaaggtggttgttagacaaggttcccgttggaaaat 288  Q
    | |||| ||||| ||||| |||||||||||  | |||||||||||    
T  25596117 tctcagcgccaaagtggtggttagacaaggagctcgttggaaaat 25596073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 291
Target Start/End: Complemental strand, 38534189 - 38533948
Alignment:
Q  51 cacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa--agggttgaatactacaaactgattcagatagt 148  Q
    ||||||||  |||||||||||| ||| || ||||| |||||||||||||| || |||||||| |||  ||||| | | |||||||||| |  | ||||||    
T  38534189 cacaaaaatgatggaggtatgggttttaaggatttcgtagcttttaatgtggcgatgcttggtaaacaagggtggca-actacaaactaaaccggatagt 38534091  T
Q  149 ttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttggcgtagcattttca 248  Q
     | || |||| |||||| |||||   ||||||||| |||||||  |  || ||  | ||| |||||||||| || || ||||||||||| || ||| |||    
T  38534090 cttgtctcaaaaattttcaaagctaggtattacccaaatagtaattttctagatgctaagctgggacataaccctagttttgtttggcgaagtattctca 38533991  T
Q  249 gtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    | ||||| ||||| |||||||||||  | ||||||||||||||    
T  38533990 gcgccaaagtggtggttagacaaggagctcgttggaaaattgg 38533948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 291
Target Start/End: Complemental strand, 38556407 - 38556166
Alignment:
Q  51 cacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa--agggttgaatactacaaactgattcagatagt 148  Q
    ||||||||  |||||||||||| ||| || ||||| |||||||||||||| || |||||||| |||  ||||| | | |||||||||| |  | ||||||    
T  38556407 cacaaaaatgatggaggtatgggttttaaggatttcgtagcttttaatgtggcgatgcttggtaaacaagggtggca-actacaaactaaaccggatagt 38556309  T
Q  149 ttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttggcgtagcattttca 248  Q
     | || |||| |||||| |||||   ||||||||| |||||||  |  || ||  | ||| |||||||||| || || ||||||||||| || ||| |||    
T  38556308 cttgtctcaaaaattttcaaagctaggtattacccaaatagtaattttctagatgctaagctgggacataaccctagttttgtttggcgaagtattctca 38556209  T
Q  249 gtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    | ||||| ||||| |||||||||||  | ||||||||||||||    
T  38556208 gcgccaaagtggtggttagacaaggagctcgttggaaaattgg 38556166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 11397965 - 11397883
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||| |||| |||||||||| |||||||||||||||||| |||   || || |||||||||||||||||||||| ||||    
T  11397965 tttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaagcaaaaa 11397883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 8764024 - 8764105
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| ||||||||||| |||   || || ||||||||| |||||||||||||||||    
T  8764024 ttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaagccaaaa 8764105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 26325845 - 26325922
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagcc 387  Q
    |||| |||||||||||||||||| |||||| ||||||||||| |||  ||| || ||||||||| |||||||||||||    
T  26325845 ttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 26325922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 41663931 - 41663850
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||||||||||||||| ||||||  |||||||||| |||  ||| || ||||||||| |||||||||||||||||    
T  41663931 ttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaa 41663850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 22160491 - 22160573
Alignment:
Q  209 ttgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||||||||||||| |||||||||||| | |||||| | ||||| |||||||| |||||||||||  | || |||||||||||    
T  22160491 ttgggacataatcccagctttgtttggagaagcattcttagtgcaaaggtggtggttagacaaggagctcgatggaaaattgg 22160573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 400
Target Start/End: Original strand, 37339853 - 37339943
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaat 400  Q
    |||||||||||||||||||| || || ||| |||||||||||||||   || || ||| ||||| ||||||||||||||||| || |||||    
T  37339853 ttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagccaaaaaaaaaaaat 37339943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 5855555 - 5855636
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||  ||   ||||| ||||||||| || ||||||||| ||||    
T  5855555 ttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagctaaaa 5855636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 10173046 - 10172965
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||| ||||||||||| |||||| ||||||| |||||||   || || ||||||||| |||||||||||| ||||    
T  10173046 ttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaaa 10172965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 17642079 - 17641998
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| ||||||||||| |||   || || |||||||||  ||||||||||||||||    
T  17642079 ttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagccaaaa 17641998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 18915900 - 18915981
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| || ||| |||||||||||| ||  ||| || ||| ||||| |||||||||||||||||    
T  18915900 ttggccagtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaagccaaaa 18915981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 44969697 - 44969778
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| ||||||| |||| |||||| ||||||||||| |||| ||| || | ||||||| ||||| |||||||||||    
T  44969697 ttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaagccaaaa 44969778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 4178711 - 4178763
Alignment:
Q  209 ttgggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggt 261  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  4178711 ttggggcataatccgagctttgtttggcgtagtattttcagtgctaaggtggt 4178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 308 - 391
Target Start/End: Original strand, 35908789 - 35908870
Alignment:
Q  308 ctttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||| |||||||||||||||||| |||||| ||||||||||| |||  ||  || ||||||||| |||||| ||||||||||    
T  35908789 ctttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccat--gtgggtcggaaaccggtgcaaaagccaaaa 35908870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 4581757 - 4581676
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| |||| |||||| |||   || || ||||||||| |||||||||||| ||||    
T  4581757 ttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaaa 4581676  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 33004090 - 33004009
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| || ||| |||||||||| ||||  | | || ||||| ||| ||||||||||| |||||    
T  33004090 ttggccagtgcgcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaaaggcaaaa 33004009  T

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Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 33498914 - 33498873
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  33498914 ttggccagtgcgcatgcctctacgcatgagccggattagtcg 33498873  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 34697368 - 34697449
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| |||| |||||||||||| |||||| ||||||||||||||| | ||  | ||| ||||| || ||||||||||||||    
T  34697368 ttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaaagccaaaa 34697449  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 34719813 - 34719890
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| || ||||| |||||||||| ||   || || |||||||||  ||||||||||||||||    
T  34719813 ccagtgcgcatgcctctacgcacgagtcagattagtcgctcacctttggtgggtcggaaactggtgcgaaagccaaaa 34719890  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 45361957 - 45361876
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||| |||| ||| || |||||||||||  ||   ||||| ||||||||| |||||||||||| ||||    
T  45361957 ttggccagtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagctaaaa 45361876  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 2567309 - 2567384
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| || ||||| |||||| || ||||  || || ||||||||| |||| ||||||    
T  2567309 ttggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaag 2567384  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 388
Target Start/End: Original strand, 17389803 - 17389882
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagcca 388  Q
    |||| |||||||||||||||| || ||||||  |||||||||| |||||  |  | ||||||||| ||||||||||||||    
T  17389803 tttgaccagtgcgcatgcctccacgcatgagctggattagtcgtccattgctgatgggtcggaaaccggtgcgaaagcca 17389882  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 21849280 - 21849205
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||| ||||||||||||||||| || ||| |||||||||||| || |||| || ||||| ||| |||| ||||||    
T  21849280 ttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggtacgaaag 21849205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 401
Target Start/End: Complemental strand, 50503432 - 50503345
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaata 401  Q
    ||||||||||||||||||| || ||| |||||| ||||||||  | | || ||||||||| || ||||||||| |||| || ||||||    
T  50503432 ccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaagcaaaaaaaaaaaaata 50503345  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 18708615 - 18708573
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgc 352  Q
    ||||| |||||||||||||||||||||||| | ||||||||||    
T  18708615 ttggctagtgcgcatgcctctacacatgagccagattagtcgc 18708573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 35211237 - 35211155
Alignment:
Q  320 cgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaataa 402  Q
    ||||||||||||| ||||||  | |||||||| |||   || || ||||||||| ||||| ||||||||||| ||||||||||    
T  35211237 cgcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtgaaagccaaaaaaataaaataa 35211155  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 892353 - 892296
Alignment:
Q  334 catgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||| |||||||||||||||   || || | |||||||||||||||||||||||||    
T  892353 catgagccggattagtcgcccacctttggtggatcggaaatcggtgcgaaagccaaaa 892296  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 30927802 - 30927721
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||| || |||||||||||| |||||| ||||||||||| ||| | || || |||| |||| |||||| ||||| ||||    
T  30927802 ttggccaatgtgcatgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaagcaaaaa 30927721  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 40288552 - 40288471
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||  ||||||||||||||| ||| |||||||||||| |||  || || ||||||||| | |||| ||||| ||||    
T  40288552 ttggccagtatgcatgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaaccagtgcaaaagcaaaaa 40288471  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 46929813 - 46929772
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||| |||||||||||| ||||||||| |||||||||||    
T  46929813 ttggccaatgcgcatgcctccacacatgagccggattagtcg 46929772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 26660176 - 26660251
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||||||||||| |||||| |||||||||||||   | || || ||||||||| |||||||||||| ||||    
T  26660176 cagtacgcatgcctctacgcatgagccggattagtcgccacct-ttggtgggtcggaaaccggtgcgaaagcaaaaa 26660251  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 28324655 - 28324615
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtc 350  Q
    |||| |||||||||||||||||| |||||| ||||||||||    
T  28324655 ttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 10327 - 10513
Alignment:
Q  6 agtagcaaagggttgcattggttatcttggaaaaagttatcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaa 105  Q
    |||| |||||| |||||||||||||||||| |||||||||| || |||||||| ||| ||||||||| |||||||||| ||| ||| |||||||||||||    
T  10327 agtaacaaaggcttgcattggttatcttgggaaaagttatcagtacacaaaaatcatagaggtatgggtttcaaagatctggcagcctttaatgttgcaa 10426  T
Q  106 tgcttggaaaa-agggttgaatactacaaactgattcagatagtttagtttcaagaatttttaaagcccagtattaccctaatagta 191  Q
    ||||||||||| ||||||| |   |||||| ||||||||| | ||||| |||  ||||||| ||||||   |||||||| |||||||    
T  10427 tgcttggaaaacagggttggaagttacaaattgattcagacaatttagcttcttgaattttcaaagccagatattacccgaatagta 10513  T

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Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 45 - 291
Target Start/End: Original strand, 5085170 - 5085417
Alignment:
Q  45 tcggtgcacaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttggaaaa-agggttgaatactacaaactgattcag 143  Q
    ||||| ||||||||  ||||||| |||  |||||| ||||||| |||||||||||| ||||||||||| ||  | |||||  |||| |||||| || | |    
T  5085170 tcggttcacaaaaaggatggaggaatgagtttcaaggatttggcagcttttaatgtggcaatgcttggtaagcaaggttggttactgcaaactaatccgg 5085269  T
Q  144 atagtttagtttcaagaatttttaaagcccagtattaccctaatagtagctacctggagtcgaagttgggacataatccaagctttgtttggcgtagcat 243  Q
    ||||| | || ||||||||||| |||||    |||||||| ||||| |  |||||  |  | |||||||| ||||||||  | ||||||||||| |||||    
T  5085270 atagtctggtctcaagaattttcaaagctagatattacccaaatagaaattacctaaatgctaagttgggtcataatccttgttttgtttggcgaagcat 5085369  T
Q  244 tttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    | |||| ||||| ||||| |||||||||||  | ||||||||||||||    
T  5085370 tctcagcgccaaagtggtggttagacaaggagctcgttggaaaattgg 5085417  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 19020027 - 19019948
Alignment:
Q  212 ggacataatccaagctttgtttggcgtagcattttcagtgccaaggtggttgttagacaaggttcccgttggaaaattgg 291  Q
    |||||||| |||||||||||||||||  | ||||||||||| |||||||||||||||||| || |||| |||||||||||    
T  19020027 ggacataacccaagctttgtttggcgatgtattttcagtgctaaggtggttgttagacaaagtgcccgctggaaaattgg 19019948  T

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Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 48804718 - 48804799
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||  ||| || ||||||||| |||||||||||| ||||    
T  48804718 ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcaaaaa 48804799  T

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Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 401
Target Start/End: Original strand, 13095893 - 13095984
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaata 401  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||   || || ||||||||| |||||| |||||||||| || ||||||    
T  13095893 ttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaagccaaaaaaaaaaaata 13095984  T

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Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 38578941 - 38578866
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||   || || ||||||||| |||||||||||    
T  38578941 ttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38578866  T

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Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 27028314 - 27028389
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||   || || ||||||||| |||||||||||    
T  27028314 ttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 27028389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 10047950 - 10047869
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||| |||||||| ||||||  | |||||||| |||  ||| || ||||||||| |||||||||||||||||    
T  10047950 ttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaa 10047869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 21190854 - 21190773
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| ||||||||||||||||| || ||||| |||||||||||||| | | || ||||| ||| |||||||||||| ||||    
T  21190854 ttggctagtgcgcatgcctctacgcacgagtcagattagtcgcccatcaatggtgggtcgaaaaccggtgcgaaagcaaaaa 21190773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 41945508 - 41945583
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    ||||||||||||||||||||||| || ||| ||||||||||| |||   || ||  ||||||||||||||||||||    
T  41945508 ttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 4228829 - 4228747
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||| |||||| |||| |||||| |||||||||||||||  |||  | ||||| |||||||||  ||||||||||    
T  4228829 tttggccagtgcacatgcccctacgcatgagccggattagtcgcccaccattgatgggtcgaaaatcggtgaaaaagccaaaa 4228747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 384
Target Start/End: Complemental strand, 27875162 - 27875088
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    ||||||||||| ||||||||||| ||||||||| |||||||| |||   ||||| ||||| ||| ||||||||||    
T  27875162 ttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 42210337 - 42210255
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||| || ||| ||||||| || ||||   || || ||||||||| || ||||||||||||||    
T  42210337 tttggccagtgcgcatgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccgatgcgaaagccaaaa 42210255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 1605976 - 1606057
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||| ||||||||||  | |||| |||||||||||||||   || || | ||||||| |||||||||||||||||    
T  1605976 ttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaaagccaaaa 1606057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 34659265 - 34659342
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||| || ||| |||||||||||||||  ||| ||  |||| ||| |||||||||||| ||||    
T  34659265 ccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaagcaaaaa 34659342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 43862047 - 43862006
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtc 350  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  43862047 tttggccagtgcgcatgcctctacgcatgagccggattagtc 43862006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 47341911 - 47341988
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagcc 387  Q
    ||||||||||||||||||||||| || |||  ||||| ||||  ||  ||| || |||||||||||||||||||||||    
T  47341911 ttggccagtgcgcatgcctctacgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaaagcc 47341988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 5612391 - 5612331
Alignment:
Q  52 acaaaaaccatggaggtatggatttcaaagatttggtagcttttaatgttgcaatgcttgg 112  Q
    |||||||  ||||||||||||  ||||| ||||||| |||||||||||| |||||||||||    
T  5612391 acaaaaatgatggaggtatgggcttcaaggatttggcagcttttaatgtggcaatgcttgg 5612331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 390
Target Start/End: Original strand, 23658214 - 23658294
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaa 390  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| ||||  || || |||| |||| | |||| |||||||||    
T  23658214 ttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaacctgtgcaaaagccaaa 23658294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 24983487 - 24983411
Alignment:
Q  316 agtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtc-ggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||| |||||| ||||||||||| |||  ||| || |||| ||||| || ||||||||||||||    
T  24983487 agtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaagccaaaa 24983411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 3353458 - 3353549
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaat 400  Q
    |||||||||||||||||||||||| || ||| ||||||||||| |||   ||  | | || |||| ||||||||||| ||||| ||||||||    
T  3353458 tttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaagtcaaaaaaataaaat 3353549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 385
Target Start/End: Original strand, 3603397 - 3603467
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||||||||||||||||| || ||| ||||||| |||  || | || || |||||||||||||||||||||    
T  3603397 cagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaag 3603467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 16802158 - 16802252
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaataata 404  Q
    |||||||||||| |||||||||| || ||| |||||||||||| ||  ||| || ||||| |||  ||||| |||||||||| || |||| ||||    
T  16802158 ttggccagtgcgtatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaactggtgcaaaagccaaaaaaaaaaaaaaata 16802252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 45758322 - 45758401
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||||  |||| |||||| |||| ||   || || ||||||||| | |||||||||||||||    
T  45758322 ttggccagtgcgcatgcctctacac--gagttggattaatcgcacacctttggtgggtcggaaacccgtgcgaaagccaaaa 45758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 4195277 - 4195200
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagc 386  Q
    |||||| ||||||||||||||||| |||||| |||||||| || |||  ||| || ||| ||||| || |||||||||    
T  4195277 tttggctagtgcgcatgcctctacgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaagc 4195200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 8734760 - 8734679
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||||||||||||| || || ||| | |||||||||||||   || || ||||||||| |||||||||||| ||||    
T  8734760 ttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaagctaaaa 8734679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 17748456 - 17748375
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||||||||||  | ||| ||||||||||| |||   ||  | ||||||||| || ||||||||||||||    
T  17748456 ttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaaagccaaaa 17748375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 22993441 - 22993360
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||| |||||||||||| || ||  |||||||||||| ||   || || |||| |||| |||||||||||||||||    
T  22993441 ttggccagtgtgcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaagccaaaa 22993360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 28744197 - 28744278
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||| ||||| |||||||| | ||| ||||||||||| |||   || || |||||||||  ||||||||||||||||    
T  28744197 ttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagccaaaa 28744278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 39420872 - 39420913
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||| ||||||||| |||||| |||||||||||    
T  39420872 ttggccagtgcgcgtgcctctacgcatgagccggattagtcg 39420913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 39474975 - 39475056
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| |||||||||| ||||||| |||||| ||||||||||| |||   ||||| ||||| ||| | |||||||||| ||||    
T  39474975 ttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaagcaaaaa 39475056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 386
Target Start/End: Complemental strand, 43346853 - 43346777
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagc 386  Q
    |||||| ||||||||||||||||  | ||| |||||||||||| |||  || || ||||||||| | ||||||||||    
T  43346853 ttggccggtgcgcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaagc 43346777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 42906 - 42831
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaag 385  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||   || || ||||||||| |||||||||||    
T  42906 ttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 6890 - 6971
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||   || || ||||||||| |||||||||||| ||||    
T  6890 ttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaaa 6971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 95056 - 94973
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccatta-ttagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||||||||||||| ||| |||||| |||||||||||||||  | || || |||||||||||||||| ||||||||||    
T  95056 tttgaccagtgcgcatgcctttacgcatgagccggattagtcgcccaccatttggtgggtcggaaatcggtgcaaaagccaaaa 94973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 394
Target Start/End: Complemental strand, 7909 - 7825
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataa 394  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||   || || | ||||||| |||| |||||||||||||||    
T  7909 ttggccagtgcgcatgcctctacgcattagctggattagtcgcccacctttggtggatcggaaaccggtacgaaagccaaaataa 7825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 384
Target Start/End: Original strand, 19290 - 19364
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaa 384  Q
    ||||| ||||||||  ||||||| |||||| ||||||||||| ||||||||||| | ||||||| ||||||||||    
T  19290 ttggctagtgcgcagacctctacgcatgagccggattagtcggccattattagtggatcggaaaccggtgcgaaa 19364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 403
Target Start/End: Complemental strand, 250100 - 250006
Alignment:
Q  309 tttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaataataaaataat 403  Q
    |||||||||||||||||||||||| || ||| |||||||||||| |    || || |||||||||||||||||||||  |||||||  |||||||    
T  250100 tttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaaaaaataaataaataat 250006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 12612 - 12653
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  12612 ccagtgcgcatgcctctacgcatgagtcggattagtcgccca 12653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 155785 - 155704
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||| ||||||||||||||||| || ||| |||||||||||||||   || || ||||||||  |||||||||||||||||    
T  155785 ttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaagccaaaa 155704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 41079 - 41160
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||| ||||| |||||||||||| || ||| ||||||||||||||||  || ||  |||||||| |||| ||||||||||||    
T  41079 ttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggttcgaaagccaaaa 41160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 65226 - 65145
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||||||||||||| |||||| ||||||  ||||||||||| || | ||  ||| ||||||| |||||||||||| ||||    
T  65226 ttggccagtgcgcatgtctctacgcatgagctggattagtcgctcacttttgatagatcggaaaccggtgcgaaagctaaaa 65145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 1685 - 1612
Alignment:
Q  313 gccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagc 386  Q
    |||||||||||||||||||| |||||| |  ||||||||||||   || || ||||| ||| ||||||||||||    
T  1685 gccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaagc 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 9880 - 9921
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcg 351  Q
    ||||||||||||||||||||||| || ||| |||||||||||    
T  9880 ttggccagtgcgcatgcctctacgcacgagccggattagtcg 9921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 17429 - 17470
Alignment:
Q  314 ccagtgcgcatgcctctacacatgagtcggattagtcgccca 355  Q
    ||||||||||||| |||||||| ||| |||||||||||||||    
T  17429 ccagtgcgcatgcttctacacacgagccggattagtcgccca 17470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 8775 - 8694
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||| ||||||||| ||||||  |||||||||| |||   || || |||||||||  ||||||||||| ||||    
T  8775 ttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaagctaaaa 8694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 319457 - 319538
Alignment:
Q  310 ttggccagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    ||||||||||||||| ||||||  ||||||  |||||||||| |||   || || || |||||| |||||||||||||||||    
T  319457 ttggccagtgcgcatccctctatgcatgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaagccaaaa 319538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 224357 - 224433
Alignment:
Q  315 cagtgcgcatgcctctacacatgagtcggattagtcgcccattattagtaggtcggaaatcggtgcgaaagccaaaa 391  Q
    |||||| ||| ||||||| || ||| ||||||||||| ||||  || || ||||||||| ||||||||||| |||||    
T  224357 cagtgcacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaagtcaaaa 224433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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