View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19428_high_12 (Length: 265)

Name: NF19428_high_12
Description: NF19428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19428_high_12
NF19428_high_12
[»] chr7 (25 HSPs)
chr7 (1-173)||(36966538-36966710)
chr7 (77-173)||(2764440-2764535)
chr7 (194-264)||(28824501-28824572)
chr7 (193-265)||(4971287-4971360)
chr7 (193-265)||(24267648-24267721)
chr7 (193-262)||(9055264-9055334)
chr7 (194-263)||(33684678-33684748)
chr7 (196-265)||(43107610-43107680)
chr7 (195-263)||(19426579-19426648)
chr7 (194-265)||(37392041-37392113)
chr7 (194-261)||(38023429-38023497)
chr7 (194-263)||(155984-156055)
chr7 (195-265)||(40693529-40693600)
chr7 (195-265)||(43079633-43079704)
chr7 (224-265)||(26123395-26123437)
chr7 (196-265)||(28109957-28110027)
chr7 (166-195)||(36966715-36966744)
chr7 (196-264)||(48866932-48867001)
chr7 (197-264)||(2790178-2790246)
chr7 (194-234)||(3040410-3040450)
chr7 (194-265)||(18157186-18157258)
chr7 (196-263)||(40212492-40212560)
chr7 (205-264)||(46022484-46022544)
chr7 (194-265)||(47905117-47905189)
chr7 (194-234)||(48395246-48395286)
[»] chr2 (35 HSPs)
chr2 (75-176)||(35905832-35905933)
chr2 (196-265)||(30856807-30856877)
chr2 (194-265)||(15283251-15283323)
chr2 (194-264)||(1889145-1889216)
chr2 (193-265)||(1052497-1052570)
chr2 (74-147)||(17920388-17920461)
chr2 (196-264)||(32688546-32688615)
chr2 (193-263)||(33296074-33296145)
chr2 (194-263)||(4738575-4738645)
chr2 (204-265)||(4842521-4842583)
chr2 (194-262)||(14797654-14797723)
chr2 (195-263)||(23880094-23880163)
chr2 (194-265)||(36774536-36774609)
chr2 (193-265)||(42665813-42665886)
chr2 (194-265)||(7497992-7498064)
chr2 (196-263)||(31635813-31635881)
chr2 (214-265)||(40951211-40951263)
chr2 (195-265)||(546386-546457)
chr2 (193-263)||(11229324-11229395)
chr2 (194-264)||(44189825-44189896)
chr2 (195-264)||(6365185-6365255)
chr2 (195-264)||(13711060-13711130)
chr2 (195-263)||(19913790-19913860)
chr2 (196-265)||(28165129-28165199)
chr2 (196-265)||(42554776-42554846)
chr2 (193-265)||(3585623-3585696)
chr2 (196-264)||(6639474-6639543)
chr2 (196-263)||(23690512-23690581)
chr2 (196-264)||(36376851-36376920)
chr2 (196-264)||(36435681-36435750)
chr2 (193-265)||(42251921-42251994)
chr2 (196-263)||(7086127-7086195)
chr2 (205-264)||(13333383-13333443)
chr2 (193-260)||(29168722-29168790)
chr2 (196-263)||(34249580-34249648)
[»] chr6 (24 HSPs)
chr6 (74-168)||(2281531-2281625)
chr6 (193-264)||(29383554-29383626)
chr6 (194-265)||(32729887-32729959)
chr6 (196-263)||(8395342-8395410)
chr6 (194-264)||(32853146-32853217)
chr6 (193-265)||(9188945-9189018)
chr6 (193-265)||(12044329-12044402)
chr6 (197-260)||(6435037-6435101)
chr6 (194-265)||(11785353-11785425)
chr6 (193-264)||(19789078-19789150)
chr6 (193-264)||(31480836-31480908)
chr6 (195-265)||(8173313-8173384)
chr6 (194-264)||(15722505-15722576)
chr6 (193-265)||(3088970-3089043)
chr6 (195-263)||(9954547-9954616)
chr6 (193-234)||(15666806-15666847)
chr6 (194-262)||(16337074-16337143)
chr6 (199-263)||(21506339-21506404)
chr6 (193-265)||(28965841-28965914)
chr6 (193-234)||(31517202-31517243)
chr6 (193-234)||(31883337-31883378)
chr6 (196-264)||(32457254-32457323)
chr6 (194-265)||(3821376-3821448)
chr6 (194-265)||(23633324-23633396)
[»] chr4 (50 HSPs)
chr4 (75-195)||(55280505-55280628)
chr4 (193-265)||(46566926-46566999)
chr4 (196-264)||(46794503-46794572)
chr4 (194-263)||(53583131-53583201)
chr4 (193-264)||(4896502-4896574)
chr4 (196-263)||(11064092-11064160)
chr4 (195-264)||(34116542-34116612)
chr4 (194-263)||(38844493-38844563)
chr4 (203-264)||(55926991-55927053)
chr4 (193-265)||(42853936-42854009)
chr4 (194-262)||(55595947-55596016)
chr4 (196-263)||(15596396-15596464)
chr4 (194-265)||(18874923-18874994)
chr4 (194-265)||(22920272-22920344)
chr4 (194-265)||(22971455-22971527)
chr4 (196-263)||(25725697-25725765)
chr4 (194-265)||(44272811-44272883)
chr4 (194-265)||(51397872-51397944)
chr4 (196-263)||(4489802-4489869)
chr4 (193-263)||(12241055-12241126)
chr4 (194-264)||(16004328-16004399)
chr4 (195-265)||(17363229-17363300)
chr4 (195-265)||(31147230-31147301)
chr4 (196-262)||(36812407-36812474)
chr4 (195-265)||(45274264-45274335)
chr4 (194-264)||(51296191-51296262)
chr4 (194-263)||(5208330-5208400)
chr4 (195-265)||(25539861-25539930)
chr4 (196-265)||(33438045-33438115)
chr4 (194-263)||(33820339-33820409)
chr4 (196-253)||(39010150-39010208)
chr4 (193-239)||(54800995-54801041)
chr4 (194-263)||(56379390-56379460)
chr4 (196-260)||(3475869-3475934)
chr4 (196-264)||(24772671-24772740)
chr4 (196-237)||(26885291-26885332)
chr4 (191-263)||(35661600-35661673)
chr4 (195-259)||(45277088-45277153)
chr4 (195-263)||(46355296-46355365)
chr4 (196-263)||(1031755-1031823)
chr4 (194-265)||(10096743-10096815)
chr4 (194-265)||(23094374-23094446)
chr4 (196-263)||(25523201-25523269)
chr4 (195-239)||(38133979-38134023)
chr4 (197-265)||(38961476-38961544)
chr4 (196-263)||(39881033-39881101)
chr4 (196-263)||(44165909-44165977)
chr4 (194-234)||(50831789-50831829)
chr4 (196-263)||(51039119-51039187)
chr4 (196-263)||(52392228-52392296)
[»] chr3 (37 HSPs)
chr3 (194-265)||(1901927-1901999)
chr3 (194-265)||(1911373-1911445)
chr3 (194-264)||(22813070-22813141)
chr3 (194-264)||(26279882-26279953)
chr3 (77-188)||(40489285-40489397)
chr3 (195-265)||(32981122-32981193)
chr3 (195-265)||(36869838-36869909)
chr3 (194-265)||(7215-7287)
chr3 (194-265)||(20215946-20216018)
chr3 (196-263)||(37303077-37303145)
chr3 (193-263)||(108428-108499)
chr3 (193-259)||(11335309-11335376)
chr3 (193-263)||(37303380-37303451)
chr3 (195-265)||(43900758-43900829)
chr3 (195-265)||(44334802-44334873)
chr3 (196-265)||(462402-462472)
chr3 (195-264)||(28300650-28300720)
chr3 (194-263)||(51410804-51410874)
chr3 (196-264)||(32457757-32457826)
chr3 (199-263)||(48649583-48649648)
chr3 (196-259)||(8066355-8066419)
chr3 (194-265)||(35376552-35376624)
chr3 (196-263)||(36442216-36442284)
chr3 (196-263)||(51464275-51464343)
chr3 (187-263)||(54134843-54134919)
chr3 (191-265)||(32008028-32008103)
chr3 (195-265)||(46315956-46316027)
chr3 (195-263)||(7294102-7294172)
chr3 (194-255)||(18169155-18169217)
chr3 (196-265)||(20380890-20380960)
chr3 (204-265)||(25959543-25959605)
chr3 (199-263)||(32187144-32187210)
chr3 (194-263)||(48945845-48945915)
chr3 (199-263)||(39540238-39540303)
chr3 (195-263)||(51032627-51032696)
chr3 (196-263)||(9027873-9027941)
chr3 (194-265)||(32795828-32795900)
[»] chr5 (29 HSPs)
chr5 (188-264)||(19376134-19376211)
chr5 (196-263)||(40223788-40223856)
chr5 (194-263)||(42909717-42909787)
chr5 (77-176)||(18939844-18939944)
chr5 (194-265)||(29803223-29803295)
chr5 (196-263)||(34381012-34381080)
chr5 (195-265)||(36713179-36713250)
chr5 (196-261)||(28903991-28904057)
chr5 (196-261)||(28940386-28940452)
chr5 (197-265)||(6046314-6046383)
chr5 (194-265)||(9636159-9636231)
chr5 (196-263)||(12718383-12718451)
chr5 (196-263)||(19127124-19127192)
chr5 (196-263)||(39595272-39595340)
chr5 (195-265)||(39840710-39840781)
chr5 (196-265)||(15639385-15639455)
chr5 (196-265)||(32873150-32873220)
chr5 (196-265)||(34952407-34952477)
chr5 (195-263)||(3634493-3634562)
chr5 (193-265)||(19437254-19437327)
chr5 (193-265)||(21012565-21012637)
chr5 (193-265)||(26660412-26660485)
chr5 (193-265)||(26932004-26932077)
chr5 (193-265)||(33743334-33743407)
chr5 (194-265)||(5996665-5996737)
chr5 (194-265)||(7144575-7144647)
chr5 (196-263)||(12661950-12662018)
chr5 (196-263)||(12779609-12779677)
chr5 (194-234)||(28811427-28811467)
[»] chr1 (36 HSPs)
chr1 (194-265)||(48872377-48872449)
chr1 (193-264)||(31378482-31378552)
chr1 (196-265)||(25098789-25098859)
chr1 (195-263)||(18541054-18541123)
chr1 (196-263)||(45740547-45740615)
chr1 (193-264)||(50226881-50226953)
chr1 (194-264)||(366655-366726)
chr1 (195-265)||(30530575-30530646)
chr1 (196-261)||(16658438-16658504)
chr1 (196-265)||(32821635-32821705)
chr1 (195-263)||(31436819-31436888)
chr1 (192-264)||(37843434-37843507)
chr1 (193-265)||(39815343-39815416)
chr1 (193-265)||(44112451-44112524)
chr1 (196-263)||(15061845-15061913)
chr1 (194-265)||(27352628-27352700)
chr1 (195-262)||(27810251-27810319)
chr1 (196-263)||(28253015-28253083)
chr1 (196-263)||(39010814-39010882)
chr1 (195-265)||(12999823-12999894)
chr1 (195-265)||(25988985-25989056)
chr1 (195-265)||(44641904-44641975)
chr1 (195-265)||(50118897-50118968)
chr1 (194-263)||(1615034-1615104)
chr1 (196-265)||(8464514-8464584)
chr1 (196-265)||(30530400-30530470)
chr1 (196-265)||(33422220-33422290)
chr1 (196-265)||(45470841-45470911)
chr1 (199-265)||(51172308-51172373)
chr1 (197-265)||(11068426-11068495)
chr1 (195-263)||(36690575-36690644)
chr1 (195-263)||(36706676-36706745)
chr1 (195-263)||(49425737-49425805)
chr1 (197-265)||(4604532-4604599)
chr1 (194-265)||(49596233-49596305)
chr1 (198-261)||(51339705-51339769)
[»] chr8 (25 HSPs)
chr8 (194-264)||(21418594-21418665)
chr8 (194-263)||(45101394-45101464)
chr8 (193-265)||(34996361-34996434)
chr8 (194-265)||(6004942-6005014)
chr8 (194-265)||(12045654-12045726)
chr8 (195-262)||(35633973-35634041)
chr8 (193-257)||(36497658-36497723)
chr8 (194-265)||(7678730-7678802)
chr8 (194-265)||(44380615-44380687)
chr8 (195-265)||(42443103-42443174)
chr8 (194-263)||(9738696-9738766)
chr8 (196-265)||(12659052-12659122)
chr8 (193-234)||(5740807-5740848)
chr8 (195-263)||(9048319-9048388)
chr8 (196-264)||(23258032-23258101)
chr8 (193-234)||(26629143-26629184)
chr8 (196-264)||(26871046-26871115)
chr8 (196-233)||(44103776-44103813)
chr8 (196-263)||(22767132-22767200)
chr8 (194-265)||(27630895-27630967)
chr8 (194-234)||(28927679-28927719)
chr8 (194-234)||(30170762-30170802)
chr8 (196-259)||(31806299-31806363)
chr8 (194-234)||(37033134-37033174)
chr8 (193-233)||(42996486-42996526)
[»] scaffold0011 (1 HSPs)
scaffold0011 (194-264)||(219666-219737)
[»] scaffold0002 (2 HSPs)
scaffold0002 (196-261)||(440718-440784)
scaffold0002 (196-264)||(6427-6496)
[»] scaffold0014 (1 HSPs)
scaffold0014 (194-265)||(199264-199336)
[»] scaffold0009 (1 HSPs)
scaffold0009 (199-265)||(263696-263763)
[»] scaffold0003 (1 HSPs)
scaffold0003 (195-265)||(337117-337188)
[»] scaffold0111 (1 HSPs)
scaffold0111 (196-265)||(36867-36937)
[»] scaffold0049 (1 HSPs)
scaffold0049 (196-261)||(72176-72240)
[»] scaffold0026 (1 HSPs)
scaffold0026 (196-264)||(113625-113694)
[»] scaffold0024 (2 HSPs)
scaffold0024 (194-239)||(91946-91991)
scaffold0024 (194-265)||(60467-60539)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36966538 - 36966710
Alignment:
Q  1 ttaattgatgacaacagttctttactgaggatatacaatggcaagggattgatcatacatgtataccctgttggtgttgggatcagagtgcgcaaagcgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36966538 ttaattgatgacaacagttctttactgaggatatacaatggcaagggattgatcatacatgtataccctgttggtgttgggatcagagtgcgcaaagtgg 36966637  T
Q  101 aatgtgcggaagcatgaattatctctttttgtggaacctgaacaatccaatatacctgcacaaccaacaacaa 173  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  36966638 aatgtgcggaagcatgaattatctctttttgtagaacctgaacaatccaatataccagcacaaccaacaacaa 36966710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 173
Target Start/End: Original strand, 2764440 - 2764535
Alignment:
Q  77 ttgggatcagagtgcgcaaagcggaatgtgcggaagcatgaattatctctttttgtggaacctgaacaatccaatatacctgcacaaccaacaacaa 173  Q
    ||||||||||||||||||| | ||||| || |||||| | |||||||| ||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  2764440 ttgggatcagagtgcgcaatgaggaatatgtggaagcttaaattatct-tttttgtggaatctgaacaatccaatttaccagcacaaccaacaacaa 2764535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 28824501 - 28824572
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  28824501 aagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatattcacattata 28824572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 4971287 - 4971360
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||| ||| |||||||||||| ||| | |||||||||||| |||||||||||    
T  4971287 taagagaaatgatatttgtacaaccattttgtgacaacttttatacaactttctctctcatactcacattatat 4971360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 24267721 - 24267648
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||| |||| |||| | ||||||| |||||||||||||||| | |||||||||||| |||||||||||    
T  24267721 taagagaaatgatatatgtacatccactttttgacaacttttagacaactttctctctcatactcacattatat 24267648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 9055264 - 9055334
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacatta 262  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| |||||||||| ||||||||    
T  9055264 taagagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacatta 9055334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 33684678 - 33684748
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||||| |||||||||  ||| | |||||||||||| |||||||||    
T  33684678 aagagaaatgatatttgtacaaccactttctcacaacttttttacaactttctctctcatactcacattat 33684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 43107610 - 43107680
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||| |||||||||||| |||||  |||||||||||||||| | || ||||||||| |||||||||||    
T  43107610 gagaaatgatatttgtaaaatcacttcatgacaacttttagacaactttatctctcatactcacattatat 43107680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 19426579 - 19426648
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||| ||| ||||||||||| |||| | |||||||||||| |||||||||    
T  19426579 agagaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactcacattat 19426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 37392041 - 37392113
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||| ||| | || ||||||||| |||||||||||    
T  37392041 aagagaaatgatatttgtacaaccattttttgacaacttttaaacaactttatctctcatactcacattatat 37392113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 38023497 - 38023429
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacatt 261  Q
    ||||||||| ||||||||| ||||||||| ||| || ||||||||| ||| |||||||||| |||||||    
T  38023497 aagagaaatgatatttgtacaaccactttgtgataatttttagacaactttctctctcatactcacatt 38023429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 156055 - 155984
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactt-ttagacagctt-ctctctcatattcacattat 263  Q
    ||||||||| ||||||||| | ||||||| ||||||||| ||||||| ||| |||||||||| |||||||||    
T  156055 aagagaaatgatatttgtacatccactttgtgacaacttcttagacaactttctctctcatactcacattat 155984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 40693600 - 40693529
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||| | ||| |||||||||||||||| | |||||||||||| | |||||||||    
T  40693600 agagaaatgatatttgtacaactattttttgacaacttttagacaactttctctctcatacttacattatat 40693529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 43079704 - 43079633
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| ||| || |||| |||| ||| |||||||||| |||||||||||    
T  43079704 agagaaatgatatttgtacaaccactttgtgataatttttggacaactttctctctcatactcacattatat 43079633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 26123395 - 26123437
Alignment:
Q  224 tgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  26123395 tgacaacttttagacaactttctctctcatattcacattatat 26123437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 28109957 - 28110027
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| |||||||||||| ||| | || |||| |||| |||||||||||    
T  28109957 gagaaatgatatttgtacaaccactttttgacaacttttaaacaactttatctcacatactcacattatat 28110027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 36966715 - 36966744
Alignment:
Q  166 aacaacaataaaaaggagtaaaaactgtaa 195  Q
    ||||||||||||||||||||||||||||||    
T  36966715 aacaacaataaaaaggagtaaaaactgtaa 36966744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 48867001 - 48866932
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||| ||||||||| | ||||||| ||||||||||| |||| | ||||||| |||| ||||||||||    
T  48867001 gagaaatgatatttgtacagccactttgtgacaactttttgacaactttctctcacatactcacattata 48866932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 2790178 - 2790246
Alignment:
Q  197 agaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattata 264  Q
    |||||| ||||||||| ||||||||| | |||| |||| |||| ||| |||||||||| ||||||||||    
T  2790178 agaaatgatatttgtacaaccactttgtaacaattttttgacaactttctctctcatactcacattata 2790246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 3040410 - 3040450
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    ||||||||||||||||||| ||||| ||| |||||||||||    
T  3040410 aagagaaattatatttgtacaaccaatttgtgacaactttt 3040450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 18157258 - 18157186
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||| || ||||||||| ||||||||| ||| || |||||||||  || |||||||||| |||||||||||    
T  18157258 aagagacatgatatttgtacaaccactttgtgataatttttagacaattttctctctcatactcacattatat 18157186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 40212560 - 40212492
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||||| |||| |||| ||| |  |||||||||||||| |||||||    
T  40212560 gagaaataatatttgtacaaccactttctaacaattttttgacaattttctctctcatatttacattat 40212492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 46022544 - 46022484
Alignment:
Q  205 tatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    |||||||| ||||||||| ||||||||||| |||| | |||||||||||| |||| |||||    
T  46022544 tatttgtacaaccactttatgacaactttttgacaacattctctctcatactcacgttata 46022484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 47905189 - 47905117
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| ||||||  |||||||| ||| |||||||| | |||||||||||    
T  47905189 aagagaaatgatatttgtacaaccattttttgacaatatttagacaactttctctctcacactcacattatat 47905117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 48395246 - 48395286
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    ||||||||| ||||||||| ||||||||| |||||||||||    
T  48395246 aagagaaatgatatttgtacaaccactttttgacaactttt 48395286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 35905933 - 35905832
Alignment:
Q  75 tgttgggatcagagtgcgcaaagcggaatgtgcggaagcatgaattatctctttttgtggaacctgaacaatccaatatacctgcacaaccaacaacaat 174  Q
    |||||| ||||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  35905933 tgttggaatcagagtgcgcagagcggaatatgcggaagcttaaattatctctttttgtggaacctgaacaatccaatttaccaacacagccaacaacaat 35905834  T
Q  175 aa 176  Q
    ||    
T  35905833 aa 35905832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 30856807 - 30856877
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||| | |||||||||||| |||||||||||    
T  30856807 gagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattatat 30856877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 15283323 - 15283251
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| |||||| ||||||||| ||| |||||||||| |||||||||||    
T  15283323 aagagaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctctcatactcacattatat 15283251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 1889145 - 1889216
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| |||||||||||||||| |||| |||| | |||||||||||| ||||||||||    
T  1889145 aagagaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctcatactcacattata 1889216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 1052570 - 1052497
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||| ||| | |||||||||||||| | || |||||||||||||||||||||    
T  1052570 taagagaaatgatatttgtacaaccattttttaacaacttttagacaactttatctctcatattcacattatat 1052497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 17920388 - 17920461
Alignment:
Q  74 gtgttgggatcagagtgcgcaaagcggaatgtgcggaagcatgaattatctctttttgtggaacctgaacaatc 147  Q
    ||||||||||||| |||||||| ||  ||| ||||||||| | ||||||||||||||| ||||| |||||||||    
T  17920388 gtgttgggatcagggtgcgcaatgcaaaatatgcggaagcttaaattatctctttttggggaacatgaacaatc 17920461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 32688615 - 32688546
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||| ||||||||| |||||||||||||||| |||| |||| | |||||||||||| ||||||||||    
T  32688615 gagaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctcatactcacattata 32688546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 33296145 - 33296074
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||||| ||||||||| ||||||||| ||||||||||| |||| ||| |||| ||||| |||||||||    
T  33296145 taagagaaatgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatactcacattat 33296074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 4738645 - 4738575
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| |||| ||| |||| ||||| |||||||||    
T  4738645 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatactcacattat 4738575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 4842583 - 4842521
Alignment:
Q  204 atatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| || |||||| |||||||||||||||| | |||||||||||| |||||||||||    
T  4842583 atatttgtacaatcactttgtgacaacttttagacaactttctctctcatactcacattatat 4842521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 14797723 - 14797654
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacatta 262  Q
    ||||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| |||||||||| ||||||||    
T  14797723 aagagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacatta 14797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 23880094 - 23880163
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||||||||| ||||||||| || | | |||||||||||| |||||||||    
T  23880094 agagaaatgatatttgtacaaccactttctcacaactttttgataactttctctctcatactcacattat 23880163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 36774536 - 36774609
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt-agacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| | ||| ||||| ||||||||| ||||| ||| ||||||||||||||||||||||    
T  36774536 aagagaaataatatttgtagagccattttctaacaacttttgagacaactttctctctcatattcacattatat 36774609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 42665886 - 42665813
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| || |||||| | ||||||||| |||| ||| |||||||||| |||||||||||    
T  42665886 taagagaaatgatatttgtacaatcactttattacaactttttgacaactttctctctcatactcacattatat 42665813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 7498064 - 7497992
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| | ||||||||| |||| ||| |||||||||| |||||||||||    
T  7498064 aagagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacattatat 7497992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 31635881 - 31635813
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| |||||||||| |||||||||    
T  31635881 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatactcacattat 31635813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 40951211 - 40951263
Alignment:
Q  214 aaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||||||||||||||||||| | ||||| |||||| |||||||||||    
T  40951211 aaccactttctgacaacttttagacaactttctcactcatactcacattatat 40951263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 546457 - 546386
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||    
T  546457 agagaaatgatatttgtacaaccactttattacaactttttaacaactttctctctcatactcacattatat 546386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 11229395 - 11229324
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||||| ||||||||| | ||||||| ||||||||| | |||| ||| |||||||||| |||||||||    
T  11229395 taagagaaatgatatttgtacatccactttgtgacaacttcttgacaactttctctctcatactcacattat 11229324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 44189825 - 44189896
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttag-acagcttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| | | | |||| |||||||| ||||||||||    
T  44189825 aagagaaatgatatttgtacaaccactttatgacaactttttgcaaaccttccctctcatactcacattata 44189896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 6365185 - 6365255
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattata 264  Q
    |||||||| ||||||||| ||||||||| |||||| |||| ||||  || ||||| |||||||||||||||    
T  6365185 agagaaatgatatttgtacaaccactttgtgacaattttttgacaattttctctcacatattcacattata 6365255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 13711060 - 13711130
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattata 264  Q
    |||||||| ||||||||| ||||||||| ||| ||||||  |||| ||| |||||||||| ||||||||||    
T  13711060 agagaaatgatatttgtacaaccactttttgataactttgtgacaactttctctctcatactcacattata 13711130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 19913790 - 19913860
Alignment:
Q  195 agagaaattatatttgtaaaacca-ctttctgacaacttttagacagcttc-tctctcatattcacattat 263  Q
    |||||||| |||||||||||| || |||| ||||||||||| |||| |||  |||||||||||||||||||    
T  19913790 agagaaatgatatttgtaaaaacaactttgtgacaactttttgacatctttatctctcatattcacattat 19913860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 28165129 - 28165199
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    ||||||| ||| ||||| ||||| ||| ||||||||||||||| |  |||||||||||| |||||||||||    
T  28165129 gagaaatgatacttgtacaaccattttgtgacaacttttagacaattttctctctcatactcacattatat 28165199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 42554776 - 42554846
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||    
T  42554776 gagaaatgatatttgtacaaccactttattacaacttttttacaactttctctctcatactcacattatat 42554846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 3585623 - 3585696
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||| | ||||| ||||| ||||||||| |||| ||| |||||| ||| |||||||||||    
T  3585623 taagagaaatgatatttgcacaaccaatttctaacaactttttgacatctttctctcttatactcacattatat 3585696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 6639543 - 6639474
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattata 264  Q
    ||||||| ||||||||| ||||| ||||| |||||||||  ||| ||| |||||||||| ||||||||||    
T  6639543 gagaaataatatttgtacaaccattttctaacaactttttaacaactttctctctcatactcacattata 6639474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 23690581 - 23690512
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaactttta-gacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||| ||| ||||||||| |||||||||||| |||| | |||||||||||| |||||||||    
T  23690581 gagaaatgatattagtacaaccactttttgacaacttttatgacaactttctctctcatactcacattat 23690512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 36376920 - 36376851
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattata 264  Q
    ||||||| ||||||||| |||||||||   ||||| ||| |||| ||| |||||||||||||||||||||    
T  36376920 gagaaatgatatttgtacaaccacttttgtacaacattttgacaactttctctctcatattcacattata 36376851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 36435681 - 36435750
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||| ||||||||| ||||||||| |||||||||||  ||| | ||||||| |||| ||||||||||    
T  36435681 gagaaatgatatttgtacaaccactttgtgacaactttttaacaactttctctcacatactcacattata 36435750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 42251994 - 42251921
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| || ||||||   ||||||||| || | ||| ||||||||||||||||||||||    
T  42251994 taagagaaatgatatttgtacaatcactttagtacaactttttgataactttctctctcatattcacattatat 42251921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 7086195 - 7086127
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| |||||||||   ||||||||| ||||||||| |||| ||| |||||||||| |||||||||    
T  7086195 gagaaatgatatttgtaccgccactttctcacaactttttgacaactttctctctcatactcacattat 7086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 13333443 - 13333383
Alignment:
Q  205 tatttgtaaaaccactttctgacaacttttagacag-cttctctctcatattcacattata 264  Q
    |||||||| ||||||||| ||| ||||||| ||||| ||||||||||||| |||| |||||    
T  13333443 tatttgtacaaccactttatgataactttttgacagtcttctctctcatactcacgttata 13333383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 29168722 - 29168790
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacat 260  Q
    |||||||||| ||||||||| ||||| ||| |||||||||||  ||| | |||||||||||| ||||||    
T  29168722 taagagaaatgatatttgtacaaccattttttgacaacttttgcacaactttctctctcatactcacat 29168790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 34249580 - 34249648
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||||| ||||||||| |||| | |||||||| ||| |||| ||||    
T  34249580 gagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctcttatactcacgttat 34249648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 2281625 - 2281531
Alignment:
Q  74 gtgttgggatcagagtgcgcaaagcggaatgtgcggaagcatgaattatctctttttgtggaacctgaacaatccaatatacctgcacaaccaac 168  Q
    ||||||||||||| ||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  2281625 gtgttgggatcagtgtgcgcaaaacggaatctgcggaagcttaaattatctctttttgtggaacctgaacaatccaatttaccagcacagccaac 2281531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 29383554 - 29383626
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||| | |||||||||||| ||||||||||    
T  29383554 taagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattata 29383626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 32729887 - 32729959
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| |||||||||||||||| ||| | |||||||||||| |||||||||||    
T  32729887 aagagaaatgatatttgtacaaccattttctgacaacttttatacaactttctctctcatactcacattatat 32729959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 8395342 - 8395410
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||||| ||||||||| |||| | |||||||||||| |||||||||    
T  8395342 gagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacattat 8395410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 32853217 - 32853146
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||||||||||||| || |||||| ||||||||||  |||| | |||||||||||| ||||||||||    
T  32853217 aagagaaattatatttgtacaatcactttttgacaactttgtgacaactttctctctcatactcacattata 32853146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 9189018 - 9188945
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||| ||| | |||||||||||||| | || ||||||||| |||||||||||    
T  9189018 taagagaaatgatatttgtacaaccattttttaacaacttttagacaactttatctctcatactcacattatat 9188945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 12044329 - 12044402
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||| |||||| || ||| | ||| |||||||||||||||| | |||||||||||| |||||||||||    
T  12044329 taagagaaatgatatttatacaactattttttgacaacttttagacaactttctctctcatactcacattatat 12044402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 6435037 - 6435101
Alignment:
Q  197 agaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacat 260  Q
    |||||| ||||||||| ||||||||| |||||||||||||||| | || ||||||||| ||||||    
T  6435037 agaaatgatatttgtacaaccactttgtgacaacttttagacaactttatctctcatactcacat 6435101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 11785353 - 11785425
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| |||||| |||| |||| ||| || |||||||||||||||||||    
T  11785353 aagagaaatgatatttgtacaaccattttgtgacaattttttgacaactttctatctcatattcacattatat 11785425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 19789150 - 19789078
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattata 264  Q
    |||||||||| ||||||||| ||||| ||| | ||||||||| |||| ||| |||||||||| ||||||||||    
T  19789150 taagagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacattata 19789078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 31480908 - 31480836
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||| |||| ||||||||| ||||||||||||||||| ||| |||| | || ||||||||| ||||||||||    
T  31480908 taagataaatgatatttgtacaaccactttctgacaacattttgacaactttttctctcatactcacattata 31480836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 8173384 - 8173313
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    |||||||| ||||||||  ||||||||| ||| ||||||||||| |  |||||| |||||||||||||||||    
T  8173384 agagaaatgatatttgtgcaaccactttgtgataacttttagacaattttctctttcatattcacattatat 8173313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 15722576 - 15722505
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| || || ||| ||||||||||| ||| | ||||||||||||| ||||||||||    
T  15722576 aagagaaatgatatttgtacaatcattttgtgacaactttttgacaaccttctctctcatactcacattata 15722505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 3088970 - 3089043
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||| ||  ||||||||||||||| |  |||||||||| | |||||||||||    
T  3088970 taagagaaatgatatttgtacaaccatttagtgacaacttttagacaattttctctctcacactcacattatat 3089043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 9954547 - 9954616
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||| ||| ||||||||||| |||| | |||||||||||| | |||||||    
T  9954547 agagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttctctctcatacttacattat 9954616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 15666847 - 15666806
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  15666847 taagagaaatgatatttgtacaaccattttctgacaactttt 15666806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 16337143 - 16337074
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacatta 262  Q
    ||||||||| ||||||||| || |||||| |||||| |||| ||| | ||||||||||||| ||||||||    
T  16337143 aagagaaatgatatttgtacaatcactttatgacaattttttgactaccttctctctcatactcacatta 16337074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 21506339 - 21506404
Alignment:
Q  199 aaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||| ||||||||| ||||| ||| ||||||||||| |||| | |||||||||||| |||||||||    
T  21506339 aaatgatatttgtacaaccattttttgacaactttttgacaactttctctctcatactcacattat 21506404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 28965914 - 28965841
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||| ||| | ||||||||| |||| ||| |||||||||| |||||| ||||    
T  28965914 taagagaaatgatatttgtacaaccattttgttacaactttttgacaactttctctctcatactcacatgatat 28965841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 31517243 - 31517202
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    |||||||||| ||||||||| ||||||||| |||||||||||    
T  31517243 taagagaaatgatatttgtacaaccactttttgacaactttt 31517202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 31883378 - 31883337
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    |||||||||| ||||||||| ||||||||| |||||||||||    
T  31883378 taagagaaatgatatttgtacaaccactttttgacaactttt 31883337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 32457323 - 32457254
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattata 264  Q
    ||||||| ||||||||| ||||||||| ||||||||||| ||| |  ||||||| |||| ||||||||||    
T  32457323 gagaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctcacatactcacattata 32457254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 3821376 - 3821448
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| | |||| |||| |||| ||| |||||||||| | |||||||||    
T  3821376 aagagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatacttacattatat 3821448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 23633396 - 23633324
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| |||||| || ||||||||| | | ||||||| |||| ||| |||||||||| |||||||||||    
T  23633396 aagagaaatgatatttctacaaccactttattataactttttgacaactttctctctcatactcacattatat 23633324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 55280628 - 55280505
Alignment:
Q  75 tgttgggatcagagtgcgcaaagcggaatgtgcggaagcatgaattatctctttttgtggaacctgaacaatccaatatacctgcacaac---caacaac 171  Q
    ||||||||| |||||||||||| || ||| ||| ||||  | ||||||||||||||||||||| ||||| |   ||| |||| |||||||   |||||||    
T  55280628 tgttgggattagagtgcgcaaaacgcaatatgcagaagtttaaattatctctttttgtggaacttgaacgacttaatttaccagcacaaccagcaacaac 55280529  T
Q  172 aataaaaaggagtaaaaactgtaa 195  Q
    |||||||||||||||| |||||||    
T  55280528 aataaaaaggagtaaatactgtaa 55280505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 46566926 - 46566999
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| | ||||||| |||||||||||||||| | |||||||||||| |||||||||||    
T  46566926 taagagaaatgatatttgtacatccactttgtgacaacttttagacaactttctctctcatactcacattatat 46566999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 46794572 - 46794503
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||| | |||||||||||| ||||||||||    
T  46794572 gagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattata 46794503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 53583201 - 53583131
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||||| ||||||||| |||| | |||||||||||| |||||||||    
T  53583201 aagagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacattat 53583131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 4896574 - 4896502
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    |||||||||| ||||||||| ||||||||| ||||||||||| |||| | ||||||| |||| ||||||||||    
T  4896574 taagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctcgcatactcacattata 4896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 11064160 - 11064092
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||||| |||| | |||||||||||| |||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaactttttgacaacattctctctcatactcacattat 11064092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 34116612 - 34116542
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattata 264  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||| |  |||||||||||| ||||||||||    
T  34116612 agagaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcatactcacattata 34116542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 38844563 - 38844493
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||| |||| ||||||||| ||||||||||| ||||||||| |||| | |||||||| |||||||||||||    
T  38844563 aagaaaaatgatatttgtacaaccactttctcacaactttttgacaactttctctcttatattcacattat 38844493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 55926991 - 55927053
Alignment:
Q  203 tatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattata 264  Q
    ||||||||||| |||||||| ||||||||||| ||| | ||||||||||||| ||||||||||    
T  55926991 tatatttgtaagaccactttatgacaactttttgacaaccttctctctcatactcacattata 55927053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 42853936 - 42854009
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||| | ||| |||||||||||||||| | |||||| ||||| |||||||||||    
T  42853936 taagagaaatgatatttgtacaactattttttgacaacttttagacaactttctctatcatactcacattatat 42854009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 55595947 - 55596016
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacatta 262  Q
    ||||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| |||||||||| ||||||||    
T  55595947 aagagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacatta 55596016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 15596396 - 15596464
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagct-tctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||| | |||| || ||||||||||| |||||||||    
T  15596396 gagaaatgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatactcacattat 15596464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 18874994 - 18874923
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||| | ||| |||||||||||||||| ||| |||||||||| |||||||||||    
T  18874994 aagagaaatgatatttgtacaac-attttttgacaacttttagacaactttctctctcatactcacattatat 18874923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 22920344 - 22920272
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||| | ||||| ||||| ||||||||| |||| ||| |||||||||| |||||||||||    
T  22920344 aagagaaatgatatttgcacaaccaatttctaacaactttttgacatctttctctctcatactcacattatat 22920272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 22971455 - 22971527
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||| | ||||| ||||| ||||||||| |||| ||| |||||||||| |||||||||||    
T  22971455 aagagaaatgatatttgcacaaccaatttctaacaactttttgacatctttctctctcatactcacattatat 22971527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 25725765 - 25725697
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||||| ||||||||| |||| | |||||| ||||| |||||||||    
T  25725765 gagaaatgatatttgtacaaccactttctaacaactttttgacaactttctctttcatactcacattat 25725697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 44272883 - 44272811
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||| | ||| |||||||||||| ||| | |||||||||||| |||||||||||    
T  44272883 aagagaaatgatatttgtacaactattttttgacaacttttaaacaactttctctctcatactcacattatat 44272811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 51397944 - 51397872
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| | ||||||||| |||| ||| || || ||||||||||||||||    
T  51397944 aagagaaatgatatttgtacaaccactttattacaactttttgacaactttctatcccatattcacattatat 51397872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 4489869 - 4489802
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||| ||||| |||| |||| ||||  |||||||||||| |||||||||    
T  4489869 gagaaatgatatttgtataaccattttctaacaattttttgacaatttctctctcatactcacattat 4489802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 12241055 - 12241126
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||||| ||||||||| ||| | ||||| ||||||||| |||| ||| |||||||||| |||||||||    
T  12241055 taagagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 12241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 16004399 - 16004328
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttaga-cagcttctctctcatattcacattata 264  Q
    ||||||||| ||||||||  ||||||||| ||||||||||| ||  | ||||||||| ||||||||||||||    
T  16004399 aagagaaatgatatttgttcaaccactttatgacaactttttgataaccttctctctaatattcacattata 16004328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 17363229 - 17363300
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| || |||||| | ||||||||| |||| ||| |||||||||| |||||||||||    
T  17363229 agagaaatgatatttgtacaatcactttattacaactttttgacaactttctctctcatactcacattatat 17363300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 31147230 - 31147301
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| | |||| |||| |||| ||| |||||||||| |||||||||||    
T  31147230 agagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcataatcacattatat 31147301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 36812474 - 36812407
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacatta 262  Q
    ||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| |||||||||| ||||||||    
T  36812474 gagaaatgatatttgtacaaccaatttctaacaacttttggacaactttctctctcatactcacatta 36812407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 45274264 - 45274335
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||||||||||| |||||  || | ||||||||| |||| | |||||||||||| |||||||||||    
T  45274264 agagaaattatatttgtacaaccatattattacaactttttgacaactttctctctcatactcacattatat 45274335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 51296262 - 51296191
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| || |||||| ||||||||||| |||| | ||||||| |||| ||||||||||    
T  51296262 aagagaaatgatatttgtacaatcactttatgacaactttttgacaactttctctcacatactcacattata 51296191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 5208400 - 5208330
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||  ||| | |||||||||||| |||||||||    
T  5208400 aagagaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacattat 5208330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 25539861 - 25539930
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacattatat 265  Q
    |||||||| |||||||||  |||| ||||| |||||||||||||| | ||||||||||| ||| |||||||    
T  25539861 agagaaatgatatttgtaccaccaatttctaacaacttttagacaac-tctctctcatactcatattatat 25539930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 33438045 - 33438115
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttaga-cagcttctctctcatattcacattatat 265  Q
    ||||||| ||||||||||||||| ||| |||||| |||||||  |  |||||||||||| |||||||||||    
T  33438045 gagaaatgatatttgtaaaaccaatttgtgacaatttttagataattttctctctcatactcacattatat 33438115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 33820409 - 33820339
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||| | ||||| ||||||||| |||| ||| |||||||||| |||||||||    
T  33820409 aagagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 33820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 39010208 - 39010150
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcata 253  Q
    ||||||| ||||||||| ||||| ||| ||||||||||| |||||| ||||||||||||    
T  39010208 gagaaatgatatttgtacaaccattttgtgacaactttttgacagctttctctctcata 39010150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 54800995 - 54801041
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagaca 239  Q
    |||||||||| ||||||||| ||||||||| ||| ||||||||||||    
T  54800995 taagagaaatgatatttgtacaaccactttgtgataacttttagaca 54801041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 56379390 - 56379460
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||||| ||||||||| |||||||| || |||||||||  ||| ||| |||||||||| |||||||||    
T  56379390 aagagaaatgatatttgtacaaccacttcctcacaacttttttacaactttctctctcatactcacattat 56379460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 3475869 - 3475934
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacat 260  Q
    ||||||| ||||||||| ||||| ||| |||||||||||  ||| | |||||||||||||||||||    
T  3475869 gagaaatgatatttgtacaaccattttatgacaacttttgtacaactttctctctcatattcacat 3475934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 24772671 - 24772740
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattata 264  Q
    ||||||| ||||||||| | ||| ||| ||||||||||| ||| | ||||||||||||| ||||||||||    
T  24772671 gagaaatgatatttgtacatccattttatgacaactttttgacaaccttctctctcatactcacattata 24772740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 26885291 - 26885332
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttaga 237  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||    
T  26885291 gagaaatgatatttgtacaaccactttgtgacaacttttaga 26885332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 35661673 - 35661600
Alignment:
Q  191 tgtaagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||||||| ||||||||| ||||| ||| |||||| ||||||||| |  | ||||||||| |||||||||    
T  35661673 tgtaagagaaatgatatttgtacaaccattttatgacaatttttagacaacactttctctcatactcacattat 35661600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 45277153 - 45277088
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcaca 259  Q
    |||||||| ||||||||| ||||||||||| |||||||||  ||| | |||||||||||| |||||    
T  45277153 agagaaatgatatttgtacaaccactttctcacaacttttttacaactttctctctcatactcaca 45277088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 46355365 - 46355296
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||| ||||||||| |||||||||   |||||||||| ||| | |||||||||||| |||||||||    
T  46355365 agagaaatgatatttgtacaaccacttttgtacaacttttatacaacattctctctcatactcacattat 46355296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 1031755 - 1031823
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||| ||||| | |||| ||| |||||||||| |||||||||    
T  1031755 gagaaatgatatttgtacaaccactttgtgataacttcttgacaactttctctctcatactcacattat 1031823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 10096815 - 10096743
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| | ||||||||| ||||  || || ||||||| |||||||||||    
T  10096815 aagagaaatgatatttgtacaaccactttattacaactttttgacaattttctttctcatactcacattatat 10096743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 23094374 - 23094446
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| || || ||| ||| |||||||||||| | |||||| ||||||| |||||||||    
T  23094374 aagagaaatgatatttgtacaatcattttgtgataacttttagacaactttctctttcatatttacattatat 23094446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 25523269 - 25523201
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||| | ||||| ||||||||| |||| ||| |||||||||| |||||||||    
T  25523269 gagaaatgatatttgtacaactattttctcacaactttttgacaactttctctctcatactcacattat 25523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 38133979 - 38134023
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagaca 239  Q
    |||||||||||||||||| ||||||||| |||||| |||| ||||    
T  38133979 agagaaattatatttgtacaaccactttgtgacaattttttgaca 38134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 38961544 - 38961476
Alignment:
Q  197 agaaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacattatat 265  Q
    |||||||||||||||| || |||||| | | ||||||| |||| ||| | ||||||||| |||||||||    
T  38961544 agaaattatatttgtacaatcactttattaaaactttttgacaacttttatctcatattgacattatat 38961476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 39881101 - 39881033
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| || || ||||| ||||||||| |||| ||| |||||||||| |||||||||    
T  39881101 gagaaatgatatttgtacaatcattttctaacaactttttgacaactttctctctcatactcacattat 39881033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 44165909 - 44165977
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| |||||||||  ||||| |||| |||| ||| |||||||||| |||||||||    
T  44165909 gagaaatgatatttgtacaaccactttgcgacaattttttgacaactttctctctcatactcacattat 44165977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 50831829 - 50831789
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    ||||||||| ||||||||| ||||||||| |||||||||||    
T  50831829 aagagaaatgatatttgtacaaccactttttgacaactttt 50831789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 51039187 - 51039119
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||| ||||| ||||||||||| |||| | || ||||||||| |||||||||    
T  51039187 gagaaatgatatttgtacaactactttgtgacaactttttgacaactttatctctcataatcacattat 51039119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 52392296 - 52392228
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| | ||||||| ||||||||||| |||| | || ||||||||| |||||||||    
T  52392296 gagaaatgatatttgtacatccactttgtgacaactttttgacaactttatctctcatactcacattat 52392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 1901999 - 1901927
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| | |||||||||||| |||||||||||    
T  1901999 aagagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattatat 1901927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 1911445 - 1911373
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| | |||||||||||| |||||||||||    
T  1911445 aagagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattatat 1911373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 22813070 - 22813141
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  22813070 aagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctcccatattcacattata 22813141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 26279882 - 26279953
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||| | |||||||||||| ||||||||||    
T  26279882 aagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattata 26279953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 40489397 - 40489285
Alignment:
Q  77 ttgggatcagagtgcgcaaagcggaatgtgcggaagcatgaattatctctttttgtggaacctgaacaatccaa-tatacctgcacaaccaacaacaata 175  Q
    |||||||||||||| ||||  ||||||  |||||||| || |||||||||||||||| ||| ||||||||| || ||  || |||||||||||||||| |    
T  40489397 ttgggatcagagtgtgcaatacggaataagcggaagcttggattatctctttttgtgaaacttgaacaatcaaattaatcccgcacaaccaacaacaaca 40489298  T
Q  176 aaaaggagtaaaa 188  Q
    | || ||||||||    
T  40489297 acaatgagtaaaa 40489285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 32981193 - 32981122
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||||||||||| ||||| ||  |||||||||||||||| | |||||||||||| |||||||||||    
T  32981193 agagaaattatatttgtacaaccatttagtgacaacttttagacaactttctctctcatactcacattatat 32981122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 36869909 - 36869838
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||| ||| |||||||||||||||| | |||||||||||| |||||||||||    
T  36869909 agagaaatgatatttgtacaaccattttttgacaacttttagacaactttctctctcatactcacattatat 36869838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 7287 - 7215
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| || || ||||||||||||||| |||| | |||||||||||| |||||||||||    
T  7287 aagagaaatgatatttgtacaatcattttctgacaacttttggacaactttctctctcatactcacattatat 7215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 20215946 - 20216018
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| |||||| ||||||||| ||| |||||||||| || ||||||||    
T  20215946 aagagaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctctcatactcgcattatat 20216018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 37303145 - 37303077
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||||| ||||||||| |||| | |||||||||||| |||||||||    
T  37303145 gagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacattat 37303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 108428 - 108499
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||||| ||||||||| ||||||||| |||||| |||| |||| ||| |||||||||| |||||||||    
T  108428 taagagaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctctcatactcacattat 108499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 11335376 - 11335309
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcaca 259  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| ||||||||||||||||    
T  11335376 taagagaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatattcaca 11335309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 37303380 - 37303451
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||||| ||||||||| |||||||||||  |||||||| |||| | |||||||||||| |||||||||    
T  37303380 taagagaaatgatatttgtacaaccactttctcgcaactttttgacaactttctctctcatactcacattat 37303451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 43900829 - 43900758
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| | ||||||||| |||| ||| |||||||||| |||||||||||    
T  43900829 agagaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatat 43900758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 44334873 - 44334802
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| | ||||||||| |||| ||| |||||||||| |||||||||||    
T  44334873 agagaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatat 44334802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 462472 - 462402
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||| ||| |||||||||||||||| | |||||||||||| |||| ||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaacttttagacaactttctctctcatactcacgttatat 462402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 28300720 - 28300650
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    |||||||| ||||||||| ||||||||| |||||||||||  ||| | |||||||||||||||| ||||||    
T  28300720 agagaaatgatatttgtacaaccactttatgacaactttttaacaactttctctctcatattcatattata 28300650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 51410804 - 51410874
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||||| ||||||||| ||| |  |||||| |||||||||||||||    
T  51410804 aagagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctttcatattcacattat 51410874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 32457826 - 32457757
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattata 264  Q
    ||||||| ||||||||| ||||||||| ||||||||||  |||| ||| |||||||||| ||||||||||    
T  32457826 gagaaatgatatttgtacaaccactttttgacaactttgtgacaactttctctctcatactcacattata 32457757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 48649583 - 48649648
Alignment:
Q  199 aaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||| ||||||||| ||||||||||| ||||||||| |||| | |||||||||||| |||||||||    
T  48649583 aaatgatatttgtacaaccactttctaacaactttttgacaactttctctctcatactcacattat 48649648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 8066355 - 8066419
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcaca 259  Q
    ||||||| ||||||||| ||||||||||| ||||||||| |||| | |||||||||||| |||||    
T  8066355 gagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcaca 8066419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 35376624 - 35376552
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| |||||| ||||||||| ||| |||||||||| ||| |||||||    
T  35376624 aagagaaatgatatttgtacaaccattttgtgacaatttttagacaactttctctctcatactcatattatat 35376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 36442216 - 36442284
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||||| |||| |||| |||| | |||||||||||| |||||||||    
T  36442216 gagaaatgatatttgtataaccactttctcacaattttttgacaactttctctctcatactcacattat 36442284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 51464343 - 51464275
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||||| |||| | || ||||||||| |||||||||    
T  51464343 gagaaatgatatttgtacaaccactttgtgacaactttttgacaactttatctctcatactcacattat 51464275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 54134843 - 54134919
Alignment:
Q  187 aaactgtaagagaaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacattat 263  Q
    |||||| ||||||||| ||||||||| ||||| ||| | ||||||||||   |  ||||||||||||||||||||||    
T  54134843 aaactgaaagagaaatgatatttgtacaaccatttttttacaacttttaataactttctctctcatattcacattat 54134919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 32008028 - 32008103
Alignment:
Q  191 tgtaagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||||| ||||||| | ||||| ||||| ||||||||| |||| | |||||||||||| || ||||||||    
T  32008028 tgtaagagaaatgatatttgcacaaccaatttctaacaactttttgacaactttctctctcatactcgcattatat 32008103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 46316027 - 46315956
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttaga-cagcttctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||  | ||||||| ||||| |||||||||||    
T  46316027 agagaaatgatatttgtacaaccactttatgacaactttttgataatcttctctttcatactcacattatat 46315956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 7294172 - 7294102
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaactt-ttagacagctt-ctctctcatattcacattat 263  Q
    |||||||| ||||||||| | ||||||| ||||||||| ||||||| ||| |||||||||| |||||||||    
T  7294172 agagaaatgatatttgtacatccactttgtgacaacttcttagacaactttctctctcatactcacattat 7294102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 18169155 - 18169217
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatatt 255  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| ||| |  ||||||||||||||    
T  18169155 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaaatttctctctcatatt 18169217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 20380960 - 20380890
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| ||||||||| | |||| ||| |||||||||| |||| ||||||    
T  20380960 gagaaatgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatactcactttatat 20380890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 25959605 - 25959543
Alignment:
Q  204 atatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| | ||||||||| ||| |||||||||||| ||| |||||||||| |||||||||||    
T  25959605 atatttggacaaccactttgtgataacttttagacaactttctctctcatactcacattatat 25959543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 32187144 - 32187210
Alignment:
Q  199 aaattatatttgtaaaaccactttctgacaactttta-gacagc-ttctctctcatattcacattat 263  Q
    |||| ||||||||| ||||| ||| |||||||||||| |||| | ||||||||||||||||||||||    
T  32187144 aaatgatatttgtacaaccattttgtgacaacttttatgacaaccttctctctcatattcacattat 32187210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 48945845 - 48945915
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagcttct-ctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||| ||||||||| | ||||  || | ||||||||||||||||||    
T  48945845 aagagaaatgatatttgtacaaccactttgtgacaacttcttgacaattttttctctcatattcacattat 48945915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 39540238 - 39540303
Alignment:
Q  199 aaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattat 263  Q
    |||| ||||||||| ||||||||||| ||||||||| ||| |  |||||||||||| |||||||||    
T  39540238 aaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattat 39540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 51032696 - 51032627
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||| ||||| ||||||||| ||||  || |||||||||| |||||||||    
T  51032696 agagaaatgatatttgtacaaccattttctaacaactttttgacaattttctctctcatactcacattat 51032627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 9027873 - 9027941
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||| ||||||| || | ||| |||||||||| |||||||||    
T  9027873 gagaaatgatatttgtacaaccactttgtgataactttttgataactttctctctcatactcacattat 9027941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 32795828 - 32795900
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    ||||||||| |||||| || |||||| || | ||||||||||||| |  |||||||||||| |||||||||||    
T  32795828 aagagaaatgatatttatataaccacattgtaacaacttttagacaattttctctctcatactcacattatat 32795900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 19376211 - 19376134
Alignment:
Q  188 aactgtaagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||| || | | |||||||||||| ||||||||||    
T  19376211 aactctaagagaaatgatatttgtacaaccactttctgacaactttttgataactttctctctcatactcacattata 19376134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 40223856 - 40223788
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||| | |||||||||||| |||||||||    
T  40223856 gagaaattatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattat 40223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 42909717 - 42909787
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| | |||| ||||||| |||||||||    
T  42909717 aagagaaattatatttgtacaaccactttctcacaactttttgacaactttctttctcatactcacattat 42909787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 18939944 - 18939844
Alignment:
Q  77 ttgggatcagagtgcgcaaagcggaatgtgcggaagcatgaattatctcttt-ttgtggaacctgaacaatccaatatacctgcacaaccaacaacaata 175  Q
    |||||||||||||| ||||  |  ||| ||| ||||| | |||||||| ||| |||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  18939944 ttgggatcagagtgtgcaatacaaaatatgcagaagcttaaattatctttttcttgtggaatctgaacaatcaaatttaccagcacaaccaacaacaata 18939845  T
Q  176 a 176  Q
    |    
T  18939844 a 18939844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 29803223 - 29803295
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||| | ||| |||||||||||| ||| ||| ||||||||||||||||||||||    
T  29803223 aagagaaatgatatttgtacaactattttttgacaacttttaaacaactttctctctcatattcacattatat 29803295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 34381012 - 34381080
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||||| |||| | |||||||||||| |||||||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattat 34381080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 36713250 - 36713179
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| ||||||||| | |||| ||| |||||||||| |||||||||||    
T  36713250 agagaaatgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatactcacattatat 36713179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 28903991 - 28904057
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacatt 261  Q
    ||||||| ||||||||| |||||| || |||||||||||||||| | |||||||||||| |||||||    
T  28903991 gagaaatgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatactcacatt 28904057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 28940386 - 28940452
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacatt 261  Q
    ||||||| ||||||||| |||||| || |||||||||||||||| | |||||||||||| |||||||    
T  28940386 gagaaatgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatactcacatt 28940452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 6046314 - 6046383
Alignment:
Q  197 agaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||||||| | ||||| ||||| ||||||||| |||| | |||||||||||| |||||||||||    
T  6046314 agaaattatatttgaacaaccaatttctaacaactttttgacaactttctctctcatactcacattatat 6046383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 9636231 - 9636159
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||| ||| ||||||||| ||||||||| || |||||||||| || ||| |||||||||| |||||||||||    
T  9636231 aagagtaatgatatttgtacaaccactttgtgccaacttttaggcaactttctctctcatactcacattatat 9636159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 12718451 - 12718383
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||| ||| ||||||||||| |||| | || |||||||||||||||||||    
T  12718451 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatattcacattat 12718383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 19127124 - 19127192
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagct-tctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||| | |||| || ||||||||||| |||||||||    
T  19127124 gagaaatgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatactcacattat 19127192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 39595272 - 39595340
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||||| |||| | |||||||||||| |||| ||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacgttat 39595340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 39840781 - 39840710
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| | ||||||||| ||||  || |||||||||| |||||||||||    
T  39840781 agagaaataatatttgtacaaccactttattacaactttttgacaaatttctctctcatactcacattatat 39840710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 15639385 - 15639455
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||| ||  |||||||||||||||| | || ||||||||| |||||||||||    
T  15639385 gagaaatgatatttgtacaaccatttggtgacaacttttagacaactttttctctcatactcacattatat 15639455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 32873220 - 32873150
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| |||| ||||| |||||||||||    
T  32873220 gagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctatcatactcacattatat 32873150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 34952477 - 34952407
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| | ||||| |||  ||| ||| ||||||||||||||||||||||    
T  34952477 gagaaatgatatttgtacaaccactttattacaacattttcacaactttctctctcatattcacattatat 34952407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 3634493 - 3634562
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||||||||||| | ||||||||| |||||| ||||  ||| | |||||||||||| |||||||||    
T  3634493 agagaaattatatttgcacaaccactttgtgacaatttttttacaactttctctctcatactcacattat 3634562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 19437254 - 19437327
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||| ||||| ||||| ||| ||| ||| |||| ||| ||| ||||||||||||||||||||||    
T  19437254 taagagaaatgatacttgtacaaccattttgtgataacctttaaacaactttctctctcatattcacattatat 19437327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 21012565 - 21012637
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaactttt-agacagcttctctctcatattcacattatat 265  Q
    |||||||||||||||||||| ||||| ||| |||||| ||||  |||| ||| ||||||||||| |||||||||    
T  21012565 taagagaaattatatttgtacaaccattttatgacaatttttgtgacaactt-tctctcatatttacattatat 21012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 26660485 - 26660412
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| | ||| ||| ||||||||| | |||| ||| |||||||||| |||||||||||    
T  26660485 taagagaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactcacattatat 26660412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 26932077 - 26932004
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| | ||| ||| ||||||||| | |||| ||| |||||||||| |||||||||||    
T  26932077 taagagaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactcacattatat 26932004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 33743407 - 33743334
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||||||| | |||| |||| |||| ||| |||||||||| | |||||||||    
T  33743407 taagagaaatgatatttgtataaccactttattacaattttttgacaactttctctctcatacttacattatat 33743334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 5996665 - 5996737
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||| | ||| | |||| |||||||||  || ||||||||||||||||||||||    
T  5996665 aagagaaatgatatttgtacaactattttttaacaatttttagacaattttctctctcatattcacattatat 5996737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 7144575 - 7144647
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| ||| |||||||| ||| ||| |||||||||| ||| |||||||    
T  7144575 aagagaaatgatatttgtacaaccattttatgataacttttaaacaactttctctctcatactcatattatat 7144647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 12662018 - 12661950
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| | ||||||| |||||| |||| |||| ||| |||||||||| |||||||||    
T  12662018 gagaaatgatatttgtacatccactttgtgacaattttttgacaactttctctctcatactcacattat 12661950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 12779677 - 12779609
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||| ||| ||||||||||| |||| | || ||||||||| |||||||||    
T  12779677 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatactcacattat 12779609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 28811427 - 28811467
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    ||||||||| ||||||||| ||||||||| |||||||||||    
T  28811427 aagagaaatgatatttgtacaaccactttgtgacaactttt 28811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 48872377 - 48872449
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||| | ||||||||||||| |||||| ||||    
T  48872377 aagagaaatgatatttgtacaaccactttatgacaacttttagacaaccttctctctcatactcacatcatat 48872449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 31378482 - 31378552
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacattata 264  Q
    |||||||||| ||||||||||||||  ||||||||||||||| |||| | ||||||||||| ||||||||||    
T  31378482 taagagaaatgatatttgtaaaaccgttttctgacaactttttgacaac-tctctctcatactcacattata 31378552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 25098859 - 25098789
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||||||| |||||||||||    
T  25098859 gagaaatgatatttgtacaaccactttgtaacaacttttagacaaccttctctctcatactcacattatat 25098789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 18541123 - 18541054
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  18541123 agagaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatattcacattat 18541054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 45740615 - 45740547
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||||| || ||| || |||||||||||||||||||    
T  45740615 gagaaatgatatttgtacaaccactttgtgacaactttttgatagctttttctctcatattcacattat 45740547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 50226953 - 50226881
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    |||||||||| ||||||||| ||||||||| ||||||||||| |||| | |||||||||||| || |||||||    
T  50226953 taagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcgcattata 50226881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 366655 - 366726
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| |||||| || ||||||||||||| ||||||| |||| | |||||||||||| ||||||||||    
T  366655 aagagaaatgatatttatacaaccactttctgataactttttgacaactttctctctcatactcacattata 366726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 30530646 - 30530575
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||| |||||| || ||||| ||| |||||||||||||||| | |||||||||||| |||||||||||    
T  30530646 agagaaatgatatttatacaaccattttgtgacaacttttagacaactttctctctcatactcacattatat 30530575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 16658438 - 16658504
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacatt 261  Q
    ||||||| ||||||||| |||||| || |||||||||||||||| | |||||||||||| |||||||    
T  16658438 gagaaatgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatactcacatt 16658504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 32821635 - 32821705
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| |||||||||||| || |  |||||||||||| |||||||||||    
T  32821635 gagaaatgatatttgtacaaccactttgtgacaacttttaaacaattttctctctcatactcacattatat 32821705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 31436819 - 31436888
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||||||||| ||||||||| ||| |  |||||||||||| |||||||||    
T  31436819 agagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattat 31436888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 37843507 - 37843434
Alignment:
Q  192 gtaagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||||| ||||||||| ||| ||||| ||||||||||  |||| | |||||||||||| ||||||||||    
T  37843507 gtaagagaaatgatatttgtacaactactttttgacaactttgtgacaactttctctctcatactcacattata 37843434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 39815343 - 39815416
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||||||||||||||| ||||| |||   ||||||||| |||| | |||||||||||| |||||||||||    
T  39815343 taagagaaattatatttgtacaaccattttgctacaacttttggacaactttctctctcatactcacattatat 39815416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 44112451 - 44112524
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||||||| | |||| |||| |||| ||| |||||||||| |||||||||||    
T  44112451 taagagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacattatat 44112524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 15061845 - 15061913
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||| ||||||||||| ||| |  |||||||||||| |||||||||    
T  15061845 gagaaatgatatttgtataaccactttgtgacaactttttgacaattttctctctcatactcacattat 15061913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 27352628 - 27352700
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| ||| ||||||| |||| ||| |||||||||| |||||||||||    
T  27352628 aagagaaatgatatttgtacaaccattttgtgataacttttggacaactttctctctcatactcacattatat 27352700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 27810319 - 27810251
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacatta 262  Q
    |||||||| ||||||||| ||||| ||||| ||||||||| |||| ||| |||||||||| ||||||||    
T  27810319 agagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatactcacatta 27810251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 28253015 - 28253083
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||||||||| ||||||||| ||| |  |||||||||||| |||||||||    
T  28253015 gagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattat 28253083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 39010814 - 39010882
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| | ||||||||| ||||||||| |||| ||| |||||||||| |||||||||    
T  39010814 gagaaatgatatttgtacagccactttctcacaactttttgacaactttctctctcatactcacattat 39010882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 12999894 - 12999823
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||| ||||| |||||||||  ||| ||| |||||||||| |||||||||||    
T  12999894 agagaaatgatatttgtacaaccattttctaacaacttttgtacaactttctctctcatactcacattatat 12999823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 25989056 - 25988985
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||| ||| | ||||||||||||| |  |||||||||||| |||||||||||    
T  25989056 agagaaatgatatttgtacaaccattttttaacaacttttagacaattttctctctcatactcacattatat 25988985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 44641975 - 44641904
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||||||| | |||| |||| |||| ||| |||||||||| |||||||||||    
T  44641975 agagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacattatat 44641904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 50118968 - 50118897
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagcttc-tctctcatattcacattatat 265  Q
    |||||||| |||||| || ||||||||| | ||||||||| |||| |||  |||||||||||||||||||||    
T  50118968 agagaaatgatatttatataaccactttattacaactttttgacaactttatctctcatattcacattatat 50118897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 1615034 - 1615104
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||||| |||||||||  ||| | |||| ||||||| |||||||||    
T  1615034 aagagaaatgatatttgtacaaccactttctcacaactttttaacaactttctttctcatactcacattat 1615104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 8464584 - 8464514
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| | ||||||||| ||||  || |||||||||| |||||||||||    
T  8464584 gagaaatgatatttgtacaaccactttattacaactttttgacaattttctctctcatactcacattatat 8464514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 30530470 - 30530400
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||    
T  30530470 gagaaatgatatttgtacaaccactttattacaactttttaacaactttctctctcatactcacattatat 30530400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 33422290 - 33422220
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| |||| |||| ||||||||| | ||||||||| |||| ||| |||||||||| |||||||||||    
T  33422290 gagaaatgatatctgtacaaccactttattacaactttttgacaactttctctctcatactcacattatat 33422220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 45470911 - 45470841
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| |||||| || | |||| |||| |||| ||| ||||||||||||||||||||||    
T  45470911 gagaaatgatatttgtacaaccaccttattacaattttttgacaactttctctctcatattcacattatat 45470841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 51172373 - 51172308
Alignment:
Q  199 aaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacattatat 265  Q
    |||| ||||||||| ||||||||  |||||||||||| ||| ||| ||||||||| |||||||||||    
T  51172373 aaatgatatttgtacaaccacttcgtgacaacttttaaacaactt-tctctcatactcacattatat 51172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 11068426 - 11068495
Alignment:
Q  197 agaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||| ||||||||| ||||||||| | |||| |||| |||| ||| ||||||||| ||||||||||||    
T  11068426 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatgttcacattatat 11068495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 36690644 - 36690575
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||| ||||| |||| |||| |||| ||| |||||||||| |||||||||    
T  36690644 agagaaatgatatttgtacaaccaatttctcacaattttttgacaactttctctctcatactcacattat 36690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 36706745 - 36706676
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||| ||||| |||| |||| |||| ||| |||||||||| |||||||||    
T  36706745 agagaaatgatatttgtacaaccaatttctcacaattttttgacaactttctctctcatactcacattat 36706676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 49425737 - 49425805
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||||||| ||||||||||| |||| | || ||||||||| |||||||||    
T  49425737 agagaaatgatatttgtacaaccactttgtgacaactttt-gacaactttatctctcatactcacattat 49425805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 4604532 - 4604599
Alignment:
Q  197 agaaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacattatat 265  Q
    |||||| ||||||||| |||||| || |||||| |||||||||  || ||||||||| |||||||||||    
T  4604532 agaaataatatttgtacaaccaccttgtgacaatttttagacaattt-tctctcatactcacattatat 4604599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 49596233 - 49596305
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| | |||| |||| |||| ||| |||||||||| |||||||||||    
T  49596233 aagagaaatgatatttgtacaaccattttattacaattttttgacaactttctctctcatactcacattatat 49596305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 51339769 - 51339705
Alignment:
Q  198 gaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacatt 261  Q
    ||||| ||||||||| ||||||||| | |||||||||||||| | |||| ||||||| |||||||    
T  51339769 gaaatgatatttgtacaaccactttgtaacaacttttagacaactttctttctcatactcacatt 51339705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 21418665 - 21418594
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| ||||||||||||||||| ||| |||| | |||||||||||| ||||||||||    
T  21418665 aagagaaatgatatttgtacaaccactttctgacaaccttttgacaactttctctctcatactcacattata 21418594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 45101394 - 45101464
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| |||| | |||||||||||| |||||||||    
T  45101394 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattat 45101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 34996434 - 34996361
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    |||||||||| ||||||||| ||||||||| | |||| |||| |||| ||| ||||||||||||||||||||||    
T  34996434 taagagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatattcacattatat 34996361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 6004942 - 6005014
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||| ||||| |||||| ||||||||| ||| |||||||||| |||||||||||    
T  6004942 aagagaaatgatatttgtacaactactttgtgacaatttttagacaactttctctctcatactcacattatat 6005014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 12045726 - 12045654
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||  |||||||||||||||| | |||||||||||| |||||||||||    
T  12045726 aagagaaatgatatttgtacaaccatttagtgacaacttttagacaactttctctctcatactcacattatat 12045654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 35634041 - 35633973
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacatta 262  Q
    |||||||| |||||| || ||||||||||||||||||||| |||| | |||||||||||||||| ||||    
T  35634041 agagaaatgatatttctacaaccactttctgacaactttttgacaactttctctctcatattcatatta 35633973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 36497658 - 36497723
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattca 257  Q
    |||||||||| ||||||||| ||| | ||| |||||||||||||||| | ||||||||||||||||    
T  36497658 taagagaaatgatatttgtacaactattttgtgacaacttttagacaactttctctctcatattca 36497723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 7678730 - 7678802
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| ||||||||||  ||||  || |||||||||| |||||||||||    
T  7678730 aagagaaatgatatttgtacaaccactttttgacaactttgtgacaattttctctctcatactcacattatat 7678802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 44380687 - 44380615
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| ||||||| |||| ||| ||| |||||||||| |||||||||||    
T  44380687 aagagaaatgatatttgtacaaccattttgtgacaacctttaaacaactttctctctcatactcacattatat 44380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 42443103 - 42443174
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||| ||||||||| || || ||  |||||||||||||||| | |||||||||||| |||||||||||    
T  42443103 agagaaatgatatttgtacaatcatttagtgacaacttttagacaactttctctctcatactcacattatat 42443174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 9738766 - 9738696
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagac-agcttctctctcatattcacattat 263  Q
    ||||||||| ||||||||| ||||||||||| |||| |||| ||| |  |||||||||||| |||||||||    
T  9738766 aagagaaatgatatttgtacaaccactttctcacaattttttgacaattttctctctcatactcacattat 9738696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 12659052 - 12659122
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||||| ||||| ||| | ||||||||| |||| ||| |||||||||| |||||||||||    
T  12659052 gagaaatgatatttgtacaaccaatttttaacaactttttgacaactttctctctcatactcacattatat 12659122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 5740848 - 5740807
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    |||||||||| ||||||||| ||||||||| |||||||||||    
T  5740848 taagagaaatgatatttgtacaaccactttttgacaactttt 5740807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 9048388 - 9048319
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    |||||||| ||||||||| ||||| ||||| ||||||||| ||||  || |||||||||| |||||||||    
T  9048388 agagaaatgatatttgtataaccattttctaacaactttttgacaattttctctctcatactcacattat 9048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 23258032 - 23258101
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||||||||||| || || ||| ||| ||||||| |||| | |||||||||||| ||||||||||    
T  23258032 gagaaattatatttgtacaatcaatttgtgagaacttttcgacaactttctctctcatactcacattata 23258101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 26629184 - 26629143
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    |||||||||| ||||||||| ||||||||| |||||||||||    
T  26629184 taagagaaatgatatttgtacaaccactttttgacaactttt 26629143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 26871046 - 26871115
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||| ||||||||| || |||||| ||||||||||| |||| | |||||||||||  ||||||||||    
T  26871046 gagaaatgatatttgtacaatcactttatgacaactttttgacaacattctctctcattctcacattata 26871115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 44103776 - 44103813
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttt 233  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  44103776 gagaaattatatttgtacaaccactttatgacaacttt 44103813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 22767132 - 22767200
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattat 263  Q
    ||||||| ||||||||| ||||| ||||| ||||||||| ||||  || |||||||||| |||||||||    
T  22767132 gagaaatgatatttgtacaaccattttctcacaactttttgacaattttctctctcatactcacattat 22767200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 27630895 - 27630967
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| | ||| ||| |||||| |||| |||| ||| |||||||||| |||||||||||    
T  27630895 aagagaaatgatatttgtacatccattttatgacaattttttgacaactttctctctcatactcacattatat 27630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 28927679 - 28927719
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    ||||||||| ||||||||| ||||||||| |||||||||||    
T  28927679 aagagaaatgatatttgtacaaccactttgtgacaactttt 28927719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 30170802 - 30170762
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    ||||||||| ||||||||| ||||||||| |||||||||||    
T  30170802 aagagaaatgatatttgtacaaccactttttgacaactttt 30170762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 31806299 - 31806363
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcaca 259  Q
    ||||||| ||||||||| ||||| ||||| |||| |||| |||| ||| ||||||||||||||||    
T  31806299 gagaaatgatatttgtacaaccattttctaacaattttttgacaactttctctctcatattcaca 31806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 37033174 - 37033134
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaactttt 234  Q
    ||||||||| ||||||| | |||||||||||||||||||||    
T  37033174 aagagaaatgatatttgcacaaccactttctgacaactttt 37033134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 42996486 - 42996526
Alignment:
Q  193 taagagaaattatatttgtaaaaccactttctgacaacttt 233  Q
    |||||||||| ||||||||| |||||||||||| |||||||    
T  42996486 taagagaaatgatatttgtacaaccactttctgtcaacttt 42996526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 219737 - 219666
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| |||| | |||| ||| ||||||||||||||    
T  219737 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctttcttatattcacattata 219666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 440718 - 440784
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacatt 261  Q
    ||||||| ||||||||| ||| ||||| |||||||||||||||| | |||||||||||| |||||||    
T  440718 gagaaatgatatttgtacaactactttatgacaacttttagacaactttctctctcatactcacatt 440784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 6427 - 6496
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||| ||||||||| | ||| ||| ||||||||||| |||| | |||||||||||| ||||||||||    
T  6427 gagaaatgatatttgtacatccattttatgacaactttttgacaacattctctctcatactcacattata 6496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 199264 - 199336
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||||||| | |||| |||| |||| ||| |||||||||| |||||||||||    
T  199264 aagagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacattatat 199336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 263763 - 263696
Alignment:
Q  199 aaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||| ||||||||| ||||||||||| |||||||||  ||| | |||||||||||||||| |||||||    
T  263763 aaatgatatttgtacaaccactttctaacaactttttaacaactttctctctcatattcatattatat 263696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 337117 - 337188
Alignment:
Q  195 agagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattatat 265  Q
    |||||||| ||||||||| ||||| |||||||||||||||  | | | |||||||||||| |||||||||||    
T  337117 agagaaatgatatttgtacaaccattttctgacaacttttgaataactttctctctcatactcacattatat 337188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 36937 - 36867
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagctt-ctctctcatattcacattatat 265  Q
    ||||||| ||||||| | ||||||||| | ||||||||| |||| ||| |||||| |||||||||||||||    
T  36937 gagaaatgatatttgcacaaccactttattacaactttttgacaactttctctcttatattcacattatat 36867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 72240 - 72176
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagcttctctctcatattcacatt 261  Q
    ||||||| ||||||||| ||||| ||| | |||||||||||||| ||| ||||||||| |||||||    
T  72240 gagaaatgatatttgtacaaccattttgtaacaacttttagacaactt-tctctcatactcacatt 72176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 113625 - 113694
Alignment:
Q  196 gagaaattatatttgtaaaaccactttctgacaacttttagacagc-ttctctctcatattcacattata 264  Q
    ||||||| ||||||||| ||||||||| |||||||||||  ||| | ||||||| |||| ||||||||||    
T  113625 gagaaatgatatttgtacaaccactttgtgacaactttttaacaactttctctcacatactcacattata 113694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 91946 - 91991
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagaca 239  Q
    ||||||||| ||||||||| ||||||||||| ||||||||| ||||    
T  91946 aagagaaataatatttgtacaaccactttctaacaactttttgaca 91991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 60467 - 60539
Alignment:
Q  194 aagagaaattatatttgtaaaaccactttctgacaacttttagacagcttct-ctctcatattcacattatat 265  Q
    ||||||||| ||||||||| ||||| ||| | ||||||||| |||| ||| | || |||||||||||||||||    
T  60467 aagagaaatgatatttgtacaaccattttattacaactttttgacaactttttctttcatattcacattatat 60539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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