View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19428_low_10 (Length: 268)
Name: NF19428_low_10
Description: NF19428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19428_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 43179746 - 43179989
Alignment:
| Q |
10 |
ataatactagactttgtgggatcctaatcacatccttattagcnnnnnnn-gaaggatgtatatccttagtagcttgaccaacttacattttgactaaat |
108 |
Q |
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| T |
43179746 |
ataataccagactttgtgggatcctaatcacatccttattagcttttttttgaaggatgtatatccttagtagcttgaccaacttacattttgactaaat |
43179845 |
T |
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| Q |
109 |
acttgaatcttttttattatgactaaatacaatcttcaagattagtacaacacaaataaaatatgatgaggttgcaattatcttgtcaaatttatgtggc |
208 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43179846 |
acttgaatcttttttatgatgactaaatacaatcttcaagattagtacaacacaaataaaatatgatgaggttgcaattatcttgtcaaatttatgtggc |
43179945 |
T |
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| Q |
209 |
agtatgagaattgagaactataattagtagtgacggggaagaac |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43179946 |
agtatgagaattgagaactataattagtagtgacggggaagaac |
43179989 |
T |
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