View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19429_low_5 (Length: 389)
Name: NF19429_low_5
Description: NF19429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19429_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 7 - 377
Target Start/End: Complemental strand, 38312942 - 38312572
Alignment:
| Q |
7 |
atctgggcttctgtctccttatatctagatgtcatcaacctcttcctctctctacttactgtttttagagctgctaattgaagatgatataggaaattct |
106 |
Q |
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| T |
38312942 |
atctgggcttctgtctccttatatctagatgtcatcaacctcttcctctctctacttactgtttttagagctgctaattgaagatgatataggaaattct |
38312843 |
T |
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| Q |
107 |
atttgatgtaaatttctgttagatgctaaatgaccttgtccaactgtggaatctaatgtcttttaacggtttcttgaatatctcattaggattttaaggt |
206 |
Q |
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| T |
38312842 |
atttgatgtaaatttctgttagatgctaaatgaccttgtccaactgtggaatctaatgtcttttaacggtttcttgaatatctcattaggattttaaggt |
38312743 |
T |
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| Q |
207 |
taggtttgaatcatggtttttatgtttctatagcctcaaggagagggataaactatctgtaatatcatgaatgatgatgctattacatttggtgttagca |
306 |
Q |
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| T |
38312742 |
taggtttgaatcatggtttttatgtttctatagcctcaaggagagagataaactatctgtaatatcatgaatgatgatgctattacatttggtgttagca |
38312643 |
T |
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| Q |
307 |
ttagttgtatttaactaaactctctacaatttcaagtttcaacaatattgatgttattgcgatatgaaaca |
377 |
Q |
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| T |
38312642 |
ttagttgtatttaactaaactctctacaatttcaagtttcaacaatattgatgttattgcgatatgaaaca |
38312572 |
T |
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